3-47312766-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312766
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312766
    reference: chr 3
allele count: 1
allele frequency: 8.297653423611802e-6
allele num: 120516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.552C>T
  hgvsp: ENST00000452770.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.273C>T
  hgvsp: ENST00000352910.4:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.552C>T
  hgvsp: ENST00000265529.3:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.552C>T
  hgvsp: ENST00000444589.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.451C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.552C>T
  hgvsp: ENST00000335044.2:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.552C>T
  hgvsp: ENST00000443784.1:c.552C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2276C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.910C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu184Leu
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

3-47312788-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312788
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312788
    reference: chr 3
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.530T>C
  hgvsp: ENSP00000405774.1:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.530T>C
  hgvsp: ENSP00000333942.2:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.530T>C
  hgvsp: ENSP00000265529.3:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.530T>C
  hgvsp: ENSP00000414987.2:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2254T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.429T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.251T>C
  hgvsp: ENSP00000292334.5:p.Ile84Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.888T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.530T>C
  hgvsp: ENSP00000391100.2:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44355
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile177Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-47312798-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312798
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312798
    reference: chr 3
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.241G>A
  hgvsp: ENSP00000292334.5:p.Gly81Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.520G>A
  hgvsp: ENSP00000414987.2:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.419G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.520G>A
  hgvsp: ENSP00000265529.3:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.520G>A
  hgvsp: ENSP00000405774.1:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.520G>A
  hgvsp: ENSP00000333942.2:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.878G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.520G>A
  hgvsp: ENSP00000391100.2:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2244G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly174Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

3-47312804-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312804
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312804
    reference: chr 3
allele count: 4
allele frequency: 3.300820253833077e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.514C>T
  hgvsp: ENSP00000414987.2:p.Pro172Ser
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.514C>T
  hgvsp: ENSP00000265529.3:p.Pro172Ser
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2238C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.413C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.872C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.514C>T
  hgvsp: ENSP00000405774.1:p.Pro172Ser
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.514C>T
  hgvsp: ENSP00000333942.2:p.Pro172Ser
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.514C>T
  hgvsp: ENSP00000391100.2:p.Pro172Ser
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.235C>T
  hgvsp: ENSP00000292334.5:p.Pro79Ser
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6821
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro172Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-47312813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312813
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312813
    reference: chr 3
allele count: 7
allele frequency: 5.775291652228438e-5
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.505G>A
  hgvsp: ENSP00000405774.1:p.Val169Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.863G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2229G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.404G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.505G>A
  hgvsp: ENSP00000414987.2:p.Val169Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.505G>A
  hgvsp: ENSP00000333942.2:p.Val169Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.505G>A
  hgvsp: ENSP00000265529.3:p.Val169Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.226G>A
  hgvsp: ENSP00000292334.5:p.Val76Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.505G>A
  hgvsp: ENSP00000391100.2:p.Val169Met
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44504
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val169Met
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

3-47312814-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312814
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312814
    reference: chr 3
allele count: 42
allele frequency: 3.465117814005676e-4
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.504C>T
  hgvsp: ENST00000335044.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.862C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.504C>T
  hgvsp: ENST00000443784.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.504C>T
  hgvsp: ENST00000444589.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2228C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.403C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.504C>T
  hgvsp: ENST00000265529.3:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.504C>T
  hgvsp: ENST00000452770.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.225C>T
  hgvsp: ENST00000352910.4:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 40610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile168Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

3-47312818-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312818
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312818
    reference: chr 3
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2224C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.500C>T
  hgvsp: ENSP00000333942.2:p.Thr167Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.500C>T
  hgvsp: ENSP00000405774.1:p.Thr167Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.500C>T
  hgvsp: ENSP00000265529.3:p.Thr167Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.858C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.500C>T
  hgvsp: ENSP00000414987.2:p.Thr167Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.399C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.221C>T
  hgvsp: ENSP00000292334.5:p.Thr74Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.500C>T
  hgvsp: ENSP00000391100.2:p.Thr167Ile
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr167Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

3-47312822-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312822
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312822
    reference: chr 3
allele count: 3
allele frequency: 2.474471700291988e-5
allele num: 121238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.854A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.395A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.496A>G
  hgvsp: ENSP00000405774.1:p.Met166Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.496A>G
  hgvsp: ENSP00000265529.3:p.Met166Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.496A>G
  hgvsp: ENSP00000414987.2:p.Met166Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.217A>G
  hgvsp: ENSP00000292334.5:p.Met73Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.496A>G
  hgvsp: ENSP00000391100.2:p.Met166Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2220A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.496A>G
  hgvsp: ENSP00000333942.2:p.Met166Val
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40632
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met166Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

3-47312826-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312826
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312825
    reference: chr 3
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.212delC
  hgvsp: ENSP00000292334.5:p.Thr71AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.491delC
  hgvsp: ENSP00000265529.3:p.Thr164AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.491delC
  hgvsp: ENSP00000391100.2:p.Thr164AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2215delC
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.849delC
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.491delC
  hgvsp: ENSP00000414987.2:p.Thr164AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.491delC
  hgvsp: ENSP00000333942.2:p.Thr164AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.491delC
  hgvsp: ENSP00000405774.1:p.Thr164AsnfsTer3
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.390delC
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12711
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr164AsnfsTer3
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: TG
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

3-47312827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312827
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312827
    reference: chr 3
allele count: 78
allele frequency: 6.433095803642122e-4
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.491C>T
  hgvsp: ENSP00000333942.2:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.491C>T
  hgvsp: ENSP00000414987.2:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.491C>T
  hgvsp: ENSP00000391100.2:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.212C>T
  hgvsp: ENSP00000292334.5:p.Thr71Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.491C>T
  hgvsp: ENSP00000405774.1:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2215C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.390C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.491C>T
  hgvsp: ENSP00000265529.3:p.Thr164Ile
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.849C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40575
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr164Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

3-47312829-GACTGAGGGTCCAAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312829
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312815
    reference: chr 3
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsp: ENSP00000265529.3:p.Val159HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsp: ENSP00000391100.2:p.Val159HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsp: ENSP00000333942.2:p.Val159HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsp: ENSP00000292334.5:p.Val66HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsp: ENSP00000405774.1:p.Val159HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsp: ENSP00000414987.2:p.Val159HisfsTer15
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6817
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val159HisfsTer15
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: GACTGAGGGTCCAAC
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

3-47312833-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312833
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312833
    reference: chr 3
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.485C>T
  hgvsp: ENSP00000265529.3:p.Ser162Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.206C>T
  hgvsp: ENSP00000292334.5:p.Ser69Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.485C>T
  hgvsp: ENSP00000333942.2:p.Ser162Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.485C>T
  hgvsp: ENSP00000414987.2:p.Ser162Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2209C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.384C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.485C>T
  hgvsp: ENSP00000391100.2:p.Ser162Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.485C>T
  hgvsp: ENSP00000405774.1:p.Ser162Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.843C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6817
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser162Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/3-47312843-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312843
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312843
    reference: chr 3
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.196G>T
  hgvsp: ENSP00000292334.5:p.Val66Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.475G>T
  hgvsp: ENSP00000405774.1:p.Val159Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2199G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.833G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.475G>T
  hgvsp: ENSP00000333942.2:p.Val159Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.475G>T
  hgvsp: ENSP00000265529.3:p.Val159Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.475G>T
  hgvsp: ENSP00000414987.2:p.Val159Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.475G>T
  hgvsp: ENSP00000391100.2:p.Val159Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.374G>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val159Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

3-47312843-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312843
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312843
    reference: chr 3
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.196G>C
  hgvsp: ENSP00000292334.5:p.Val66Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.475G>C
  hgvsp: ENSP00000405774.1:p.Val159Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.833G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.475G>C
  hgvsp: ENSP00000391100.2:p.Val159Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.475G>C
  hgvsp: ENSP00000414987.2:p.Val159Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.475G>C
  hgvsp: ENSP00000333942.2:p.Val159Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.374G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2199G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.475G>C
  hgvsp: ENSP00000265529.3:p.Val159Leu
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val159Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

3-47312858-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312858
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312858
    reference: chr 3
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2184T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.460T>C
  hgvsp: ENSP00000391100.2:p.Ser154Pro
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.460T>C
  hgvsp: ENSP00000405774.1:p.Ser154Pro
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.818T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.460T>C
  hgvsp: ENSP00000265529.3:p.Ser154Pro
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.460T>C
  hgvsp: ENSP00000414987.2:p.Ser154Pro
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.359T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.460T>C
  hgvsp: ENSP00000333942.2:p.Ser154Pro
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.181T>C
  hgvsp: ENSP00000292334.5:p.Ser61Pro
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6821
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser154Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

3-47312861-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312861
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312861
    reference: chr 3
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.178C>G
  hgvsp: ENSP00000292334.5:p.Leu60Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.457C>G
  hgvsp: ENSP00000333942.2:p.Leu153Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.457C>G
  hgvsp: ENSP00000391100.2:p.Leu153Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.457C>G
  hgvsp: ENSP00000414987.2:p.Leu153Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.457C>G
  hgvsp: ENSP00000405774.1:p.Leu153Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2181C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.457C>G
  hgvsp: ENSP00000265529.3:p.Leu153Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.356C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.815C>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu153Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

3-47312874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312874
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312874
    reference: chr 3
allele count: 6
allele frequency: 4.949923276189219e-5
allele num: 121214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.444C>T
  hgvsp: ENST00000443784.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.444C>T
  hgvsp: ENST00000265529.3:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.444C>T
  hgvsp: ENST00000452770.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.444C>T
  hgvsp: ENST00000335044.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.802C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.165C>T
  hgvsp: ENST00000352910.4:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.444C>T
  hgvsp: ENST00000444589.2:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2168C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.343C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Ser148Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

3-47312876-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312876
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312876
    reference: chr 3
allele count: 7
allele frequency: 5.775196356676127e-5
allele num: 121208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.163A>G
  hgvsp: ENSP00000292334.5:p.Ser55Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.442A>G
  hgvsp: ENSP00000405774.1:p.Ser148Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.442A>G
  hgvsp: ENSP00000414987.2:p.Ser148Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.341A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.800A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.442A>G
  hgvsp: ENSP00000265529.3:p.Ser148Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.442A>G
  hgvsp: ENSP00000333942.2:p.Ser148Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2166A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.442A>G
  hgvsp: ENSP00000391100.2:p.Ser148Gly
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser148Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

3-47312879-CATT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312879
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312876
    reference: chr 3
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.436_438delAAT
  hgvsp: ENSP00000333942.2:p.Asn146del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.436_438delAAT
  hgvsp: ENSP00000391100.2:p.Asn146del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.436_438delAAT
  hgvsp: ENSP00000265529.3:p.Asn146del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.335_337delAAT
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.157_159delAAT
  hgvsp: ENSP00000292334.5:p.Asn53del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.436_438delAAT
  hgvsp: ENSP00000405774.1:p.Asn146del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.436_438delAAT
  hgvsp: ENSP00000414987.2:p.Asn146del
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2160_366+2162delAAT
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.794_796delAAT
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn146del
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: CATT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

3-47312896-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312896
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312896
    reference: chr 3
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.422A>T
  hgvsp: ENSP00000405774.1:p.Tyr141Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.321A>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.422A>T
  hgvsp: ENSP00000333942.2:p.Tyr141Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.422A>T
  hgvsp: ENSP00000414987.2:p.Tyr141Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.143A>T
  hgvsp: ENSP00000292334.5:p.Tyr48Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.780A>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.422A>T
  hgvsp: ENSP00000391100.2:p.Tyr141Phe
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2146A>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.422A>T
  hgvsp: ENSP00000265529.3:p.Tyr141Phe
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr141Phe
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

3-47312905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312905
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312905
    reference: chr 3
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.413G>A
  hgvsp: ENSP00000265529.3:p.Arg138His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.134G>A
  hgvsp: ENSP00000292334.5:p.Arg45His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.771G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.413G>A
  hgvsp: ENSP00000391100.2:p.Arg138His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.413G>A
  hgvsp: ENSP00000405774.1:p.Arg138His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.413G>A
  hgvsp: ENSP00000414987.2:p.Arg138His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2137G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.413G>A
  hgvsp: ENSP00000333942.2:p.Arg138His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.312G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg138His
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-47312906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312906
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312906
    reference: chr 3
allele count: 12
allele frequency: 9.921783275180659e-5
allele num: 120946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.412C>T
  hgvsp: ENSP00000405774.1:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.412C>T
  hgvsp: ENSP00000333942.2:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2136C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.770C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.412C>T
  hgvsp: ENSP00000265529.3:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.412C>T
  hgvsp: ENSP00000414987.2:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.412C>T
  hgvsp: ENSP00000391100.2:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.311C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.133C>T
  hgvsp: ENSP00000292334.5:p.Arg45Cys
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg138Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

3-47312907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312907
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312907
    reference: chr 3
allele count: 157
allele frequency: 1.298142911478229e-3
allele num: 120942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.411G>A
  hgvsp: ENST00000452770.2:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.132G>A
  hgvsp: ENST00000352910.4:c.132G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.310G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.411G>A
  hgvsp: ENST00000265529.3:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.411G>A
  hgvsp: ENST00000444589.2:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.411G>A
  hgvsp: ENST00000443784.1:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.411G>A
  hgvsp: ENST00000335044.2:c.411G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.769G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2135G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40206
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 9.75e1
  variant carriers: 156
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val137Val
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/3-47312909-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312909
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312909
    reference: chr 3
allele count: 4
allele frequency: 3.308136361380816e-5
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.409G>T
  hgvsp: ENSP00000333942.2:p.Val137Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.409G>T
  hgvsp: ENSP00000405774.1:p.Val137Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.409G>T
  hgvsp: ENSP00000265529.3:p.Val137Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.767G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.409G>T
  hgvsp: ENSP00000414987.2:p.Val137Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2133G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.130G>T
  hgvsp: ENSP00000292334.5:p.Val44Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.409G>T
  hgvsp: ENSP00000391100.2:p.Val137Leu
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.308G>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40193
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val137Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-47312916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312916
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312916
    reference: chr 3
allele count: 70
allele frequency: 5.79335915516271e-4
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.402C>T
  hgvsp: ENST00000444589.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.123C>T
  hgvsp: ENST00000352910.4:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.402C>T
  hgvsp: ENST00000443784.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.301C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.402C>T
  hgvsp: ENST00000265529.3:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2126C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.402C>T
  hgvsp: ENST00000335044.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.760C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.402C>T
  hgvsp: ENST00000452770.2:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 40085
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala134Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

3-47312922-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312922
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312922
    reference: chr 3
allele count: 2
allele frequency: 1.656122685568547e-5
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.396A>G
  hgvsp: ENST00000452770.2:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.396A>G
  hgvsp: ENST00000444589.2:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.396A>G
  hgvsp: ENST00000335044.2:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.396A>G
  hgvsp: ENST00000443784.1:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.117A>G
  hgvsp: ENST00000352910.4:c.117A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.754A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2120A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.295A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.396A>G
  hgvsp: ENST00000265529.3:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr132Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-47312924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312924
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312924
    reference: chr 3
allele count: 5
allele frequency: 4.140923922945688e-5
allele num: 120746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.394A>G
  hgvsp: ENSP00000414987.2:p.Thr132Ala
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2118A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.752A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.293A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.394A>G
  hgvsp: ENSP00000333942.2:p.Thr132Ala
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.394A>G
  hgvsp: ENSP00000391100.2:p.Thr132Ala
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.394A>G
  hgvsp: ENSP00000405774.1:p.Thr132Ala
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.115A>G
  hgvsp: ENSP00000292334.5:p.Thr39Ala
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.394A>G
  hgvsp: ENSP00000265529.3:p.Thr132Ala
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr132Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-47312925-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312925
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312925
    reference: chr 3
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.393C>T
  hgvsp: ENST00000335044.2:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.292C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.393C>T
  hgvsp: ENST00000444589.2:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2117C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.393C>T
  hgvsp: ENST00000452770.2:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.751C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.393C>T
  hgvsp: ENST00000443784.1:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.114C>T
  hgvsp: ENST00000352910.4:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.393C>T
  hgvsp: ENST00000265529.3:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro131Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-47312930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312930
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312930
    reference: chr 3
allele count: 4
allele frequency: 3.316364601124247e-5
allele num: 120614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.388C>T
  hgvsp: ENSP00000414987.2:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.388C>T
  hgvsp: ENSP00000333942.2:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.388C>T
  hgvsp: ENSP00000265529.3:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.109C>T
  hgvsp: ENSP00000292334.5:p.Arg37Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.388C>T
  hgvsp: ENSP00000391100.2:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2112C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.388C>T
  hgvsp: ENSP00000405774.1:p.Arg130Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.746C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.287C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg130Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

3-47312936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312936
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312936
    reference: chr 3
allele count: 3
allele frequency: 2.489172101359088e-5
allele num: 120522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.382G>A
  hgvsp: ENSP00000265529.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.382G>A
  hgvsp: ENSP00000414987.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2106G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.382G>A
  hgvsp: ENSP00000333942.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.103G>A
  hgvsp: ENSP00000292334.5:p.Glu35Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.382G>A
  hgvsp: ENSP00000405774.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.382G>A
  hgvsp: ENSP00000391100.2:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.281G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.740G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu128Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-47312937-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312937
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312937
    reference: chr 3
allele count: 1
allele frequency: 8.298892927683448e-6
allele num: 120498
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.381C>G
  hgvsp: ENSP00000265529.3:p.Ile127Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.381C>G
  hgvsp: ENSP00000333942.2:p.Ile127Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.381C>G
  hgvsp: ENSP00000391100.2:p.Ile127Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.381C>G
  hgvsp: ENSP00000414987.2:p.Ile127Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.739C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.381C>G
  hgvsp: ENSP00000405774.1:p.Ile127Met
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.280C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2105C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.102C>G
  hgvsp: ENSP00000292334.5:p.Ile34Met
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile127Met
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

3-47312937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312937
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312937
    reference: chr 3
allele count: 2
allele frequency: 1.65977858553669e-5
allele num: 120498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.381C>T
  hgvsp: ENST00000265529.3:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.381C>T
  hgvsp: ENST00000335044.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.381C>T
  hgvsp: ENST00000443784.1:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.739C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.280C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.381C>T
  hgvsp: ENST00000444589.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.381C>T
  hgvsp: ENST00000452770.2:c.381C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.102C>T
  hgvsp: ENST00000352910.4:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2105C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile127Ile
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

3-47312943-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312943
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312943
    reference: chr 3
allele count: 1
allele frequency: 8.306613725848521e-6
allele num: 120386
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.375G>A
  hgvsp: ENST00000335044.2:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.375G>A
  hgvsp: ENST00000443784.1:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2099G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.375G>A
  hgvsp: ENST00000444589.2:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.375G>A
  hgvsp: ENST00000452770.2:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.96G>A
  hgvsp: ENST00000352910.4:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.375G>A
  hgvsp: ENST00000265529.3:c.375G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.733G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.274G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg125Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

3-47312964-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312964
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312964
    reference: chr 3
allele count: 1
allele frequency: 8.337780149413021e-6
allele num: 119936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-13A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2078A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-13A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-47312967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312967
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312967
    reference: chr 3
allele count: 2
allele frequency: 1.668836153666433e-5
allele num: 119844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-16A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2075A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

3-47312970-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312970
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312970
    reference: chr 3
allele count: 1
allele frequency: 8.350451759440186e-6
allele num: 119754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2072T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-19T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-19T>C
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

3-47312972-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312972
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312972
    reference: chr 3
allele count: 2
allele frequency: 1.670815859384137e-5
allele num: 119702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2070G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-21G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-21G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41810
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

3-47312973-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312973
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312973
    reference: chr 3
allele count: 18
allele frequency: 1.504060964604432e-4
allele num: 119676
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2069C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-22C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-22C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

3-47312978-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312978
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312978
    reference: chr 3
allele count: 1
allele frequency: 8.358967500334358e-6
allele num: 119632
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2064G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-27G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-27G>C
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41181
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

3-47312983-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312983
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312983
    reference: chr 3
allele count: 1
allele frequency: 8.360644772924887e-6
allele num: 119608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2059T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-32T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-32T>C
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-47312990-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312990
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312990
    reference: chr 3
allele count: 1
allele frequency: 8.380824673147837e-6
allele num: 119320
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2052G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-39G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-39G>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-47312990-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47312990
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47312990
    reference: chr 3
allele count: 1
allele frequency: 8.380824673147837e-6
allele num: 119320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2052G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-39G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-39G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-47313000-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47313000
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47313000
    reference: chr 3
allele count: 1
allele frequency: 8.407883231317684e-6
allele num: 118936
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2042G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-49G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-49G>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5946
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

3-47313002-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47313002
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47313002
    reference: chr 3
allele count: 4
allele frequency: 3.363096739477711e-5
allele num: 118938
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.367-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.266-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.367-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+2040T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.88-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.367-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.367-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.725-51T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.367-51T>C
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3887
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10827
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

3-47314997-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47314997
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47314997
    reference: chr 3
allele count: 14
allele frequency: 1.277558767703314e-4
allele num: 109584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1818C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1818C>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+45C>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19155
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

3-47315008-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315008
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315008
    reference: chr 3
allele count: 1
allele frequency: 9.097028910357877e-6
allele num: 109926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1807A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1807A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+34A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

3-47315011-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315011
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315011
    reference: chr 3
allele count: 3
allele frequency: 2.727570280394225e-5
allele num: 109988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1804C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1804C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+31C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6158
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2940
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

3-47315012-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315012
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315012
    reference: chr 3
allele count: 1
allele frequency: 9.08859563020322e-6
allele num: 110028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1803A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1803A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+30A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21515
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-47315018-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315018
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315018
    reference: chr 3
allele count: 1
allele frequency: 9.063717937097797e-6
allele num: 110330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1797G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+24G>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1797G>C
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20852
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

3-47315027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315027
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315027
    reference: chr 3
allele count: 2
allele frequency: 1.800050401411239e-5
allele num: 111108
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1788C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1788C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+15C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

3-47315036-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315036
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315037
    reference: chr 3
allele count: 1
allele frequency: 8.936550491510277e-6
allele num: 111900
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1778dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1778dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+5dupA
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
hgvs: c.366+5dupA
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

3-47315038-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315038
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315038
    reference: chr 3
allele count: 51
allele frequency: 4.549428199318478e-4
allele num: 112102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1777G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1777G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+4G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21741
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22415
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 2.75e1
  variant carriers: 0
hgvs: c.366+4G>A
num of homozygotes: 1
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

3-47315041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315041
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315041
    reference: chr 3
allele count: 1
allele frequency: 8.900756564307967e-6
allele num: 112350
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1774G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.724+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.366+1G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1774G>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5788
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
hgvs: c.366+1G>A
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

3-47315043-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315043
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315043
    reference: chr 3
allele count: 1
allele frequency: 8.876737621389386e-6
allele num: 112654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.365A>G
  hgvsp: ENSP00000265529.3:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1772A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1772A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.365A>G
  hgvsp: ENSP00000391100.2:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.723A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.365A>G
  hgvsp: ENSP00000387959.1:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.365A>G
  hgvsp: ENSP00000333942.2:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.365A>G
  hgvsp: ENSP00000414987.2:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.365A>G
  hgvsp: ENSP00000405774.1:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln122Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

3-47315047-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315047
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315047
    reference: chr 3
allele count: 1
allele frequency: 8.847365254627173e-6
allele num: 113028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1768C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.361C>T
  hgvsp: ENSP00000391100.2:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.361C>T
  hgvsp: ENSP00000405774.1:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.361C>T
  hgvsp: ENSP00000265529.3:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1768C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.719C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.361C>T
  hgvsp: ENSP00000387959.1:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.361C>T
  hgvsp: ENSP00000414987.2:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.361C>T
  hgvsp: ENSP00000333942.2:p.Gln121Ter
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln121Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

3-47315055-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315055
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315055
    reference: chr 3
allele count: 2
allele frequency: 1.753002015952318e-5
allele num: 114090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1760G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.353G>A
  hgvsp: ENSP00000387959.1:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.353G>A
  hgvsp: ENSP00000265529.3:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.353G>A
  hgvsp: ENSP00000405774.1:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.711G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1760G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.353G>A
  hgvsp: ENSP00000414987.2:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.353G>A
  hgvsp: ENSP00000391100.2:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.353G>A
  hgvsp: ENSP00000333942.2:p.Arg118His
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg118His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

3-47315056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315056
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315056
    reference: chr 3
allele count: 5
allele frequency: 4.356235515516911e-5
allele num: 114778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1759C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.352C>T
  hgvsp: ENSP00000265529.3:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.352C>T
  hgvsp: ENSP00000391100.2:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.352C>T
  hgvsp: ENSP00000333942.2:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.352C>T
  hgvsp: ENSP00000414987.2:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.710C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1759C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.352C>T
  hgvsp: ENSP00000387959.1:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.352C>T
  hgvsp: ENSP00000405774.1:p.Arg118Cys
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg118Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-47315060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315060
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315060
    reference: chr 3
allele count: 1
allele frequency: 8.657708823936834e-6
allele num: 115504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.348C>A
  hgvsp: ENST00000443784.1:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.348C>A
  hgvsp: ENST00000444589.2:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1755C>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1755C>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.348C>A
  hgvsp: ENST00000335044.2:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.348C>A
  hgvsp: ENST00000265529.3:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.348C>A
  hgvsp: ENST00000452770.2:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.348C>A
  hgvsp: ENST00000456548.1:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.706C>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu116Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-47315061-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315061
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315061
    reference: chr 3
allele count: 2
allele frequency: 1.730253482135133e-5
allele num: 115590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1754T>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.347T>A
  hgvsp: ENSP00000391100.2:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.347T>A
  hgvsp: ENSP00000387959.1:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1754T>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.347T>A
  hgvsp: ENSP00000405774.1:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.347T>A
  hgvsp: ENSP00000265529.3:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.347T>A
  hgvsp: ENSP00000333942.2:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.347T>A
  hgvsp: ENSP00000414987.2:p.Leu116His
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.705T>A
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu116His
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

3-47315063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315063
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315063
    reference: chr 3
allele count: 2
allele frequency: 1.726161706828696e-5
allele num: 115864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.345C>T
  hgvsp: ENST00000265529.3:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.703C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.345C>T
  hgvsp: ENST00000456548.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1752C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1752C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.345C>T
  hgvsp: ENST00000335044.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.345C>T
  hgvsp: ENST00000444589.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.345C>T
  hgvsp: ENST00000452770.2:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.345C>T
  hgvsp: ENST00000443784.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2842
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ile115Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-47315066-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315066
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315066
    reference: chr 3
allele count: 3
allele frequency: 2.582733565205413e-5
allele num: 116156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1749G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.700G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.342G>T
  hgvsp: ENST00000335044.2:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1749G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.342G>T
  hgvsp: ENST00000452770.2:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.342G>T
  hgvsp: ENST00000444589.2:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.342G>T
  hgvsp: ENST00000456548.1:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.342G>T
  hgvsp: ENST00000265529.3:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.342G>T
  hgvsp: ENST00000443784.1:c.342G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2842
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly114Gly
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

3-47315070-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315070
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315070
    reference: chr 3
allele count: 5
allele frequency: 4.277745457034325e-5
allele num: 116884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1745G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.696G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1745G>A
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.338G>A
  hgvsp: ENSP00000405774.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.338G>A
  hgvsp: ENSP00000265529.3:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.338G>A
  hgvsp: ENSP00000391100.2:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.338G>A
  hgvsp: ENSP00000333942.2:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.338G>A
  hgvsp: ENSP00000414987.2:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.338G>A
  hgvsp: ENSP00000387959.1:p.Arg113Gln
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22296
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2842
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg113Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP

3-47315070-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315070
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315069
    reference: chr 3
allele count: 1
allele frequency: 8.55549091406865e-6
allele num: 116884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.337delC
  hgvsp: ENSP00000387959.1:p.Arg113GlyfsTer17
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.695delC
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.337delC
  hgvsp: ENSP00000333942.2:p.Arg113GlyfsTer14
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.337delC
  hgvsp: ENSP00000265529.3:p.Arg113GlyfsTer14
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1744delC
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.337delC
  hgvsp: ENSP00000414987.2:p.Arg113GlyfsTer14
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.337delC
  hgvsp: ENSP00000391100.2:p.Arg113GlyfsTer14
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.337delC
  hgvsp: ENSP00000405774.1:p.Arg113GlyfsTer14
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1744delC
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg113GlyfsTer14
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: CG
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

3-47315071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315071
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315071
    reference: chr 3
allele count: 7
allele frequency: 5.972390491954337e-5
allele num: 117206
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.337C>T
  hgvsp: ENSP00000333942.2:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1744C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.337C>T
  hgvsp: ENSP00000387959.1:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.337C>T
  hgvsp: ENSP00000391100.2:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.337C>T
  hgvsp: ENSP00000265529.3:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.337C>T
  hgvsp: ENSP00000414987.2:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1744C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.695C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.337C>T
  hgvsp: ENSP00000405774.1:p.Arg113Trp
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24537
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg113Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

3-47315074-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315074
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315074
    reference: chr 3
allele count: 1
allele frequency: 8.479750356149515e-6
allele num: 117928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.334C>T
  hgvsp: ENSP00000265529.3:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.692C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.334C>T
  hgvsp: ENSP00000387959.1:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.334C>T
  hgvsp: ENSP00000391100.2:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.334C>T
  hgvsp: ENSP00000405774.1:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.334C>T
  hgvsp: ENSP00000333942.2:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.334C>T
  hgvsp: ENSP00000414987.2:p.His112Tyr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1741C>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1741C>T
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6185
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His112Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

3-47315076-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315076
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315076
    reference: chr 3
allele count: 1
allele frequency: 8.451227963423086e-6
allele num: 118326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1739A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.332A>G
  hgvsp: ENSP00000414987.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.332A>G
  hgvsp: ENSP00000333942.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.332A>G
  hgvsp: ENSP00000405774.1:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.690A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.332A>G
  hgvsp: ENSP00000387959.1:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.332A>G
  hgvsp: ENSP00000391100.2:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.332A>G
  hgvsp: ENSP00000265529.3:p.Lys111Arg
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1739A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys111Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

3-47315085-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315085
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315085
    reference: chr 3
allele count: 1
allele frequency: 8.384759860477596e-6
allele num: 119264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.323A>G
  hgvsp: ENSP00000405774.1:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.323A>G
  hgvsp: ENSP00000333942.2:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.323A>G
  hgvsp: ENSP00000265529.3:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.323A>G
  hgvsp: ENSP00000387959.1:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1730A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1730A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.681A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.323A>G
  hgvsp: ENSP00000414987.2:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.323A>G
  hgvsp: ENSP00000391100.2:p.Glu108Gly
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22587
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu108Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/3-47315093-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315093
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315093
    reference: chr 3
allele count: 1
allele frequency: 8.334444592612349e-6
allele num: 119984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.315G>T
  hgvsp: ENST00000265529.3:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1722G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1722G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.315G>T
  hgvsp: ENST00000456548.1:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.673G>T
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.315G>T
  hgvsp: ENST00000443784.1:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.315G>T
  hgvsp: ENST00000444589.2:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.315G>T
  hgvsp: ENST00000335044.2:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.315G>T
  hgvsp: ENST00000452770.2:c.315G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25778
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2841
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly105Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-47315097-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315097
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315097
    reference: chr 3
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.311T>C
  hgvsp: ENSP00000333942.2:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.311T>C
  hgvsp: ENSP00000387959.1:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1718T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1718T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.669T>C
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.311T>C
  hgvsp: ENSP00000405774.1:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.311T>C
  hgvsp: ENSP00000414987.2:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.311T>C
  hgvsp: ENSP00000391100.2:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.311T>C
  hgvsp: ENSP00000265529.3:p.Met104Thr
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met104Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-47315101-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47315101
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 47315101
    reference: chr 3
allele count: 1
allele frequency: 8.283768783445716e-6
allele num: 120718
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000333942
  ensembl transcript: ENST00000335044
  gene symbol: KIF9
  hgvsc: ENST00000335044.2:c.307A>G
  hgvsp: ENSP00000333942.2:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000391100
  ensembl transcript: ENST00000452770
  gene symbol: KIF9
  hgvsc: ENST00000452770.2:c.307A>G
  hgvsp: ENSP00000391100.2:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000487440
  gene symbol: KIF9
  hgvsc: ENST00000487440.1:n.665A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000265529
  ensembl transcript: ENST00000265529
  gene symbol: KIF9
  hgvsc: ENST00000265529.3:c.307A>G
  hgvsp: ENSP00000265529.3:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl transcript: ENST00000484629
  gene symbol: KIF9
  hgvsc: ENST00000484629.1:n.265+1714A>G
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000414987
  ensembl transcript: ENST00000444589
  gene symbol: KIF9
  hgvsc: ENST00000444589.2:c.307A>G
  hgvsp: ENSP00000414987.2:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000405774
  ensembl transcript: ENST00000443784
  gene symbol: KIF9
  hgvsc: ENST00000443784.1:c.307A>G
  hgvsp: ENSP00000405774.1:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000387959
  ensembl transcript: ENST00000456548
  gene symbol: KIF9
  hgvsc: ENST00000456548.1:c.307A>G
  hgvsp: ENSP00000387959.1:p.Met103Val
  variant of: http://identifiers.org/hgnc/16666
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088727
  ensembl protein: ENSP00000292334
  ensembl transcript: ENST00000352910
  gene symbol: KIF9
  hgvsc: ENST00000352910.4:c.87+1714A>G
  variant of: http://identifiers.org/hgnc/16666
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Met103Val
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6696
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507658907248824e-5
allele num: 66328
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.789e0

DP
type: SiteQuality
SIO_000300: 1.478994e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.743e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.049e1

MQ
type: SiteQuality
SIO_000300: 5.849e1

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6807
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.244e0

MQ
type: SiteQuality
SIO_000300: 5.853e1

DP
type: SiteQuality
SIO_000300: 1.488483e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

QD
type: SiteQuality
SIO_000300: 1.618e1

FS
type: SiteQuality
SIO_000300: 7.874e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

VQSLOD
type: SiteQuality
SIO_000300: -1.626e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6813
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44444
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.093e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: -8.492e-1

DP
type: SiteQuality
SIO_000300: 1.49031e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.368e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.872e1

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1442
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44457
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.463203463203463e-4
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.13e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

MQRankSum
type: SiteQuality
SIO_000300: 8.32e-1

DP
type: SiteQuality
SIO_000300: 1.491028e6

VQSLOD
type: SiteQuality
SIO_000300: 2.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

FS
type: SiteQuality
SIO_000300: 1.815e0

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1769
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1443
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 6.760672203979138e-4
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.008e0

QD
type: SiteQuality
SIO_000300: 1.247e1

DP
type: SiteQuality
SIO_000300: 1.491734e6

FS
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeQuality
all individuals: 118
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6817
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 624
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596503375454388e-4
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.252100840336134e-4
allele num: 66640
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931620629708325e-4
allele num: 10354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.48e0

FS
type: SiteQuality
SIO_000300: 1.197e0

QD
type: SiteQuality
SIO_000300: 1.319e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

MQRankSum
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SIO_000300: 4.03e-1

ClippingRankSum
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SIO_000300: -2.97e-1

BaseQRankSum
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SIO_000300: 1.92e0

DP
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SIO_000300: 1.493727e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8648
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66646
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ReadPosRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
type: SiteQuality
SIO_000300: 1.492388e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

African
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East Asian
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South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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MQRankSum
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SIO_000300: 9.51e-1

VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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African
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South Asian
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Other
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

South Asian
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allele count: 0
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African
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allele frequency: 7.333076032419915e-3
allele num: 10364
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

ReadPosRankSum
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ClippingRankSum
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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SIO_000300: -4.119e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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Other
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European (Non-Finnish)
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South Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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MQ
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FS
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10368
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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InbreedingCoeff
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QD
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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East Asian
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Latino
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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DP
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999400119976005e-5
allele num: 66680
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 1.494276e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

QD
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SIO_000300: 1.685e1

ReadPosRankSum
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SIO_000300: 1.69e0

VQSLOD
type: SiteQuality
SIO_000300: -7.57e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.4e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.306e0

DP
type: SiteQuality
SIO_000300: 1.494199e6

FS
type: SiteQuality
SIO_000300: 4.853e0

VQSLOD
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SIO_000300: 1.09e-1

ReadPosRankSum
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SIO_000300: -1.297e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.82e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 6
allele frequency: 3.635922918434129e-4
allele num: 16502
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East Asian
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

MQ
type: SiteQuality
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -7.25e-1

DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501395432584101e-5
allele num: 66646
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596503375454388e-4
allele num: 11554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 1.494112e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -7.05e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.833e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 4.95e0

ClippingRankSum
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SIO_000300: -1.503e0

DP
type: SiteQuality
SIO_000300: 1.493501e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.491913e6

MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.5721e1

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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South Asian
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504166541319455e-5
allele num: 66482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
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VQSLOD
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MQ
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ReadPosRankSum
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DP
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele num: 6614
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South Asian
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African
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European (Non-Finnish)
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Latino
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allele num: 11544
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East Asian
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ReadPosRankSum
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QD
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

South Asian
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allele count: 152
allele frequency: 9.223300970873786e-3
allele num: 16480
num of homozygotes: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.017390257845172e-5
allele num: 66474
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 1.502204e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

FS
type: SiteQuality
SIO_000300: 1.222e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.514400938995395e-5
allele num: 66454
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
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SIO_000300: 8.599999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.123e1

FS
type: SiteQuality
SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 1.490862e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.154e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66408
num of homozygotes: 0

African
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allele count: 69
allele frequency: 6.725146198830409e-3
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

DP
type: SiteQuality
SIO_000300: 1.494251e6

MQRankSum
type: SiteQuality
SIO_000300: 2.35e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

QD
type: SiteQuality
SIO_000300: 1.294e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.455e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013228071232712e-5
allele num: 66374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

FS
type: SiteQuality
SIO_000300: 4.665e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.092e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

QD
type: SiteQuality
SIO_000300: 1.147e1

DP
type: SiteQuality
SIO_000300: 1.489071e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6777
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GenotypeQuality
all individuals: 460
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.904724716907458e-4
allele num: 10244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506841058405159e-5
allele num: 66364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

FS
type: SiteQuality
SIO_000300: 5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.063e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.489096e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506931886678722e-5
allele num: 66360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.488802e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

QD
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SIO_000300: 1.269e1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.363e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016682252858306e-5
allele num: 66298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.487652e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.238e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.529122256106766e-5
allele num: 66238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.348e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 635
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66228
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South Asian
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allele frequency: 6.0790273556231e-5
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MQ
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BaseQRankSum
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FS
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QD
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -4.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66228
num of homozygotes: 0

Latino
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allele frequency: 8.689607229753215e-5
allele num: 11508
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South Asian
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allele frequency: 6.0790273556231e-5
allele num: 16450
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MQ
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QD
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DP
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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SIO_000300: 2.753e0

BaseQRankSum
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SIO_000300: -3.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511578692786746e-5
allele num: 66156
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16442
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African
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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FS
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 5.912e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.035e0

MQRankSum
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SIO_000300: -1.497e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 6.0e-3

VQSLOD
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QD
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MQ
type: SiteQuality
SIO_000300: 5.892e1

ClippingRankSum
type: SiteQuality
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DP
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SIO_000300: 1.469237e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 1.992825827022718e-4
allele num: 10036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65848
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.59e0

MQ
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 1.021e0

VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.681e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.163602513381429e-4
allele num: 8594
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16336
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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African
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allele frequency: 0.0e0
allele num: 10012
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65814
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Other
type: Population
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
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FS
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

South Asian
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allele frequency: 6.125199068969742e-5
allele num: 16326
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65774
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DP
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele num: 11494
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South Asian
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African
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East Asian
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European (Non-Finnish)
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allele frequency: 1.672800267648043e-4
allele num: 65758
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European (Finnish)
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allele num: 6610
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BaseQRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.521051350693599e-5
allele num: 65744
num of homozygotes: 0

Latino
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Other
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South Asian
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East Asian
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African
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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DP
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521282745611099e-5
allele num: 65734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
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East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

MQ
type: SiteQuality
SIO_000300: 5.917e1

InbreedingCoeff
type: SiteQuality
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FS
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MQRankSum
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SIO_000300: 1.64e-1

DP
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

QD
type: SiteQuality
SIO_000300: 1.215e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 1
allele frequency: 1.16795141322121e-4
allele num: 8562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65572
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.498e0

MQRankSum
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SIO_000300: -9.19e-1

InbreedingCoeff
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QD
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SIO_000300: 1.376e1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.428997e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.147792942333702e-5
allele num: 16266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 5.498e0

MQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e-1

DP
type: SiteQuality
SIO_000300: 1.428997e6

QD
type: SiteQuality
SIO_000300: 1.376e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.74e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.011940902651285e-4
allele num: 9882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.501e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.089e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

DP
type: SiteQuality
SIO_000300: 1.426904e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.116769122549469e-5
allele num: 65394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.83e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

DP
type: SiteQuality
SIO_000300: 1.429113e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9018
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 14
allele frequency: 2.207435905521743e-4
allele num: 63422
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.259e0

QD
type: SiteQuality
SIO_000300: 1.488e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.837e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63590
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 9106
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Latino
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allele count: 1
allele frequency: 8.855827134254339e-5
allele num: 11292
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.938e1

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 1.547233e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.568e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.717277816214856e-5
allele num: 63596
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63628
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8496
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.095290251916758e-4
allele num: 9130
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.557094e6

VQSLOD
type: SiteQuality
SIO_000300: -2.875e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.332e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.54e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.08e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63752
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.557e0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 3.11e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.123243175713661e-5
allele num: 64036
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.591173e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

FS
type: SiteQuality
SIO_000300: 5.977e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555984315678098e-5
allele num: 64268
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.428e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

MQ
type: SiteQuality
SIO_000300: 6.071e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 1.602862e6

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 50

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

Latino
type: Population
allele count: 50
allele frequency: 4.369101712687872e-3
allele num: 11444
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554243083618278e-5
allele num: 64340
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

DP
type: SiteQuality
SIO_000300: 1.606956e6

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

QD
type: SiteQuality
SIO_000300: 1.241e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 10320
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East Asian
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allele count: 0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64406
num of homozygotes: 0

Latino
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num of homozygotes: 0

QD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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African
type: Population
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Latino
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European (Non-Finnish)
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allele frequency: 1.550916591705698e-5
allele num: 64478
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
type: SiteQuality
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MQ
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DP
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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European (Non-Finnish)
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Other
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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QD
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 11436
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Other
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African
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QD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.939864209505335e-4
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.613255420575119e-5
allele num: 65030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

FS
type: SiteQuality
SIO_000300: 3.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.407e0

MQRankSum
type: SiteQuality
SIO_000300: -9.93e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.93e-1

DP
type: SiteQuality
SIO_000300: 1.629321e6

QD
type: SiteQuality
SIO_000300: 2.28e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.680555555555556e-5
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.143e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 7.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.272e0

MQ
type: SiteQuality
SIO_000300: 5.919e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.635137e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736111111111111e-4
allele num: 11520
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

QD
type: SiteQuality
SIO_000300: 7.92e0

VQSLOD
type: SiteQuality
SIO_000300: -6.918e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 1.636291e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.925186241876684e-5
allele num: 12618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530784067599424e-5
allele num: 65326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.072e0

DP
type: SiteQuality
SIO_000300: 1.638671e6

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.767e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.934610176049526e-4
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52895847348786e-5
allele num: 65404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.642586e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.185e1

FS
type: SiteQuality
SIO_000300: 2.47e0

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.162e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.455e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 4
allele frequency: 3.004356316659156e-4
allele num: 13314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52452968259292e-5
allele num: 65594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

QD
type: SiteQuality
SIO_000300: 1.073e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.114e0

DP
type: SiteQuality
SIO_000300: 1.649306e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.073e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.04627288512505e-5
allele num: 65654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.94811320754717e-4
allele num: 13568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.102e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.6e-3

ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.221e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 135
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518326197200206e-5
allele num: 65862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.99e1

FS
type: SiteQuality
SIO_000300: 3.139e0

DP
type: SiteQuality
SIO_000300: 1.658154e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.275e1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6211
bin: 6.75e1
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GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516346212167162e-5
allele num: 65948
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.21e0

FS
type: SiteQuality
SIO_000300: 1.212e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.264e0

VQSLOD
type: SiteQuality
SIO_000300: -1.311e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e0

DP
type: SiteQuality
SIO_000300: 1.662378e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.633059166887768e-5
allele num: 15076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.671722e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.193e0

VQSLOD
type: SiteQuality
SIO_000300: -7.315e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.18e0

GenotypeQuality
all individuals: 197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.407791874919902e-5
allele num: 15606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

DP
type: SiteQuality
SIO_000300: 1.681262e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

QD
type: SiteQuality
SIO_000300: 9.69e0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 223
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GenotypeQuality
all individuals: 2857
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505343971097396e-5
allele num: 66430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.686631e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.78e-1

QD
type: SiteQuality
SIO_000300: 8.67e0

FS
type: SiteQuality
SIO_000300: 9.273e0

MQRankSum
type: SiteQuality
SIO_000300: -7.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.144e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2