3-124390703-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390703
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390703
    reference: chr 3
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1173G>T
  hgvsp: ENST00000459915.1:c.1173G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1806G>T
  hgvsp: ENST00000291478.5:c.1806G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6803G>T
  hgvsp: ENST00000354186.4:c.6803G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1920G>T
  hgvsp: ENST00000393496.1:c.1920G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6897G>T
  hgvsp: ENST00000360013.3:c.6897G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1710G>T
  hgvsp: ENST00000428018.2:c.1710G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45869
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly640Gly
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

3-124390704-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390704
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390704
    reference: chr 3
allele count: 3
allele frequency: 2.486654951758894e-5
allele num: 120644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1921T>C
  hgvsp: ENSP00000377134.1:p.Phe641Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1807T>C
  hgvsp: ENSP00000291478.4:p.Phe603Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1711T>C
  hgvsp: ENSP00000402419.2:p.Phe571Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6898T>C
  hgvsp: ENSP00000353109.3:p.Phe2300Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6804T>C
  hgvsp: ENSP00000346122.4:p.Phe2269Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1174T>C
  hgvsp: ENSP00000420318.1:p.Phe392Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45871
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe641Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

3-124390711-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390711
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390711
    reference: chr 3
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1718A>T
  hgvsp: ENSP00000402419.2:p.Tyr573Phe
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1928A>T
  hgvsp: ENSP00000377134.1:p.Tyr643Phe
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6905A>T
  hgvsp: ENSP00000353109.3:p.Tyr2302Phe
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1814A>T
  hgvsp: ENSP00000291478.4:p.Tyr605Phe
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6811A>T
  hgvsp: ENSP00000346122.4:p.Tyr2271Phe
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1181A>T
  hgvsp: ENSP00000420318.1:p.Tyr394Phe
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr643Phe
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-124390720-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390720
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390720
    reference: chr 3
allele count: 2
allele frequency: 1.662620955674525e-5
allele num: 120292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1727C>A
  hgvsp: ENSP00000402419.2:p.Pro576His
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1823C>A
  hgvsp: ENSP00000291478.4:p.Pro608His
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6914C>A
  hgvsp: ENSP00000353109.3:p.Pro2305His
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6820C>A
  hgvsp: ENSP00000346122.4:p.Pro2274His
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1190C>A
  hgvsp: ENSP00000420318.1:p.Pro397His
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1937C>A
  hgvsp: ENSP00000377134.1:p.Pro646His
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1328
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro646His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

3-124390722-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390722
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390722
    reference: chr 3
allele count: 3600
allele frequency: 2.994410433856801e-2
allele num: 120224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6822G>A
  hgvsp: ENSP00000346122.4:p.Gly2275Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6916G>A
  hgvsp: ENSP00000353109.3:p.Gly2306Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1939G>A
  hgvsp: ENSP00000377134.1:p.Gly647Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1825G>A
  hgvsp: ENSP00000291478.4:p.Gly609Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1729G>A
  hgvsp: ENSP00000402419.2:p.Gly577Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1192G>A
  hgvsp: ENSP00000420318.1:p.Gly398Arg
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 5.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 4.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 2.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 5.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 4.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 9.75e1
  variant carriers: 2934
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 3.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 6.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 46685
  bin: 9.75e1
  variant carriers: 3504
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6820
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly647Arg
num of homozygotes: 91
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

3-124390724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390724
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390724
    reference: chr 3
allele count: 4
allele frequency: 3.332444681418288e-5
allele num: 120032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1941G>A
  hgvsp: ENST00000393496.1:c.1941G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1827G>A
  hgvsp: ENST00000291478.5:c.1827G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1194G>A
  hgvsp: ENST00000459915.1:c.1194G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1731G>A
  hgvsp: ENST00000428018.2:c.1731G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6824G>A
  hgvsp: ENST00000354186.4:c.6824G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6918G>A
  hgvsp: ENST00000360013.3:c.6918G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly647Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-124390727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390727
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390727
    reference: chr 3
allele count: 6
allele frequency: 5.000916834753038e-5
allele num: 119978
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6827C>T
  hgvsp: ENST00000354186.4:c.6827C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1830C>T
  hgvsp: ENST00000291478.5:c.1830C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6921C>T
  hgvsp: ENST00000360013.3:c.6921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1944C>T
  hgvsp: ENST00000393496.1:c.1944C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1197C>T
  hgvsp: ENST00000459915.1:c.1197C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1734C>T
  hgvsp: ENST00000428018.2:c.1734C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp648Asp
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

3-124390728-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390728
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390728
    reference: chr 3
allele count: 1
allele frequency: 8.33625102119075e-6
allele num: 119958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1198A>G
  hgvsp: ENSP00000420318.1:p.Lys400Glu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1735A>G
  hgvsp: ENSP00000402419.2:p.Lys579Glu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6922A>G
  hgvsp: ENSP00000353109.3:p.Lys2308Glu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1831A>G
  hgvsp: ENSP00000291478.4:p.Lys611Glu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1945A>G
  hgvsp: ENSP00000377134.1:p.Lys649Glu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6828A>G
  hgvsp: ENSP00000346122.4:p.Lys2277Glu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46123
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys649Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS

http://identifiers.org/exac.variant/3-124390733-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390733
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390733
    reference: chr 3
allele count: 2
allele frequency: 1.671011296036361e-5
allele num: 119688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1950C>A
  hgvsp: ENSP00000377134.1:p.Phe650Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6833C>A
  hgvsp: ENSP00000346122.4:p.Phe2278Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1203C>A
  hgvsp: ENSP00000420318.1:p.Phe401Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1836C>A
  hgvsp: ENSP00000291478.4:p.Phe612Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1740C>A
  hgvsp: ENSP00000402419.2:p.Phe580Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6927C>A
  hgvsp: ENSP00000353109.3:p.Phe2309Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46124
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe650Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

3-124390733-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390733
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390733
    reference: chr 3
allele count: 7
allele frequency: 5.848539536127264e-5
allele num: 119688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6833C>G
  hgvsp: ENSP00000346122.4:p.Phe2278Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1203C>G
  hgvsp: ENSP00000420318.1:p.Phe401Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1740C>G
  hgvsp: ENSP00000402419.2:p.Phe580Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6927C>G
  hgvsp: ENSP00000353109.3:p.Phe2309Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1836C>G
  hgvsp: ENSP00000291478.4:p.Phe612Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1950C>G
  hgvsp: ENSP00000377134.1:p.Phe650Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4261
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46124
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe650Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-124390734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390734
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390734
    reference: chr 3
allele count: 48
allele frequency: 4.012036108324975e-4
allele num: 119640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6834G>A
  hgvsp: ENSP00000346122.4:p.Glu2279Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1204G>A
  hgvsp: ENSP00000420318.1:p.Glu402Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1951G>A
  hgvsp: ENSP00000377134.1:p.Glu651Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1741G>A
  hgvsp: ENSP00000402419.2:p.Glu581Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6928G>A
  hgvsp: ENSP00000353109.3:p.Glu2310Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1837G>A
  hgvsp: ENSP00000291478.4:p.Glu613Lys
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu651Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-124390751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390751
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390751
    reference: chr 3
allele count: 1
allele frequency: 8.428860418071477e-6
allele num: 118640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+6T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+6T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+6T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+6T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+6T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+6T>C
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5179
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
hgvs: c.1962+6T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

3-124390752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390752
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390752
    reference: chr 3
allele count: 1
allele frequency: 8.430139434506248e-6
allele num: 118622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+7G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+7G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+7G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+7G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+7G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+7G>A
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1962+7G>A
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

3-124390759-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390759
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390759
    reference: chr 3
allele count: 1
allele frequency: 8.475869200386499e-6
allele num: 117982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+14C>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+14C>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+14C>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+14C>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+14C>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+14C>G
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

3-124390773-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390773
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390773
    reference: chr 3
allele count: 1
allele frequency: 8.574123295892996e-6
allele num: 116630
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+28T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+28T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+28T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+28T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+28T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+28T>C
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

3-124390777-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390777
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390777
    reference: chr 3
allele count: 1
allele frequency: 8.594609460946094e-6
allele num: 116352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+32C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+32C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+32C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+32C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+32C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+32C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/3-124390778-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390778
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390778
    reference: chr 3
allele count: 2
allele frequency: 1.719631311046911e-5
allele num: 116304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+33A>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+33A>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+33A>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+33A>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+33A>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+33A>C
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46131
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

3-124390782-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390782
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390782
    reference: chr 3
allele count: 4
allele frequency: 3.457754879756574e-5
allele num: 115682
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+37C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+37C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+37C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+37C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+37C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+37C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

3-124390783-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390783
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390783
    reference: chr 3
allele count: 3
allele frequency: 2.593674891497934e-5
allele num: 115666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+38G>A
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46130
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

3-124390783-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390783
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390783
    reference: chr 3
allele count: 1
allele frequency: 8.645582971659779e-6
allele num: 115666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+38G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+38G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+38G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+38G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+38G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+38G>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5069
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

3-124390796-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124390796
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124390796
    reference: chr 3
allele count: 19766
allele frequency: 1.732917185390402e-1
allele num: 114062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1962+51C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1215+51C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1752+51C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6845+51C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6939+51C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1848+51C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 1.75e1
  variant carriers: 505
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 7.75e1
  variant carriers: 1364
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 5.25e1
  variant carriers: 347
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 1.25e1
  variant carriers: 955
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 7.25e1
  variant carriers: 1282
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 8.25e1
  variant carriers: 1425
genotype depth: GenotypeDepth
  all individuals: 8828
  bin: 9.75e1
  variant carriers: 6320
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 6.25e1
  variant carriers: 811
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 9.25e1
  variant carriers: 1281
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.5e0
  variant carriers: 628
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 4.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 4.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 2.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 8.75e1
  variant carriers: 1328
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 6.75e1
  variant carriers: 1033
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 5.75e1
  variant carriers: 616
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 4.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 3.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 6.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 1.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 3.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 1.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 2.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 6.25e1
  variant carriers: 53
num of homozygotes: 1743
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-124393158-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393158
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393158
    reference: chr 3
allele count: 1
allele frequency: 8.902341315766046e-6
allele num: 112330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-53A>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-50A>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-53A>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-50A>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-50A>G
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-50A>G
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

3-124393159-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393159
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393159
    reference: chr 3
allele count: 2
allele frequency: 1.780404864066089e-5
allele num: 112334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-52T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-49T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-49T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-49T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-52T>C
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-49T>C
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38637
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

3-124393160-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393160
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393160
    reference: chr 3
allele count: 1
allele frequency: 8.902499821950003e-6
allele num: 112328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-51G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-48G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-51G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-48G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-48G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-48G>A
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

3-124393170-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393170
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393170
    reference: chr 3
allele count: 10
allele frequency: 8.883519295003908e-5
allele num: 112568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-41G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-38G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-41G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-38G>A
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39157
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

3-124393173-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393173
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393173
    reference: chr 3
allele count: 1
allele frequency: 8.875161971705983e-6
allele num: 112674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-38C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-35C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-35C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-38C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-35C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-35C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8399
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

3-124393178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393178
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393178
    reference: chr 3
allele count: 1
allele frequency: 8.860849223789609e-6
allele num: 112856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-30G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-30G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-33G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-30G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-33G>A
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-30G>A
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8397
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

3-124393178-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393178
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393178
    reference: chr 3
allele count: 1
allele frequency: 8.860849223789609e-6
allele num: 112856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-33G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-30G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-30G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-30G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-33G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-30G>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29606
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39376
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-124393182-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393182
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393182
    reference: chr 3
allele count: 1
allele frequency: 8.849557522123894e-6
allele num: 113000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-26G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-29G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-29G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-26G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-26G>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-26G>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

3-124393186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393186
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393186
    reference: chr 3
allele count: 3
allele frequency: 2.644802962179318e-5
allele num: 113430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-22C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-25C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-22C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-22C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-25C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-22C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9543
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8405
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

3-124393187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393187
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393187
    reference: chr 3
allele count: 1
allele frequency: 8.801577242641881e-6
allele num: 113616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-24C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-21C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-21C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-21C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-24C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-21C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8409
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

3-124393190-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393190
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393190
    reference: chr 3
allele count: 1
allele frequency: 8.770698849284312e-6
allele num: 114016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-21C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-21C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-18C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-18C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-18C>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-18C>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

3-124393199-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393199
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393199
    reference: chr 3
allele count: 33
allele frequency: 2.858925044183387e-4
allele num: 115428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6940-9A>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1753-9A>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6846-9A>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1849-9A>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1216-12A>T
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1963-12A>T
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14381
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-124393213-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393213
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393213
    reference: chr 3
allele count: 1
allele frequency: 8.503690601721147e-6
allele num: 117596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1965C>A
  hgvsp: ENSP00000377134.1:p.Asn655Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6851C>A
  hgvsp: ENSP00000346122.4:p.Asn2284Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1758C>A
  hgvsp: ENSP00000402419.2:p.Asn586Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1218C>A
  hgvsp: ENSP00000420318.1:p.Asn406Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6945C>A
  hgvsp: ENSP00000353109.3:p.Asn2315Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1854C>A
  hgvsp: ENSP00000291478.4:p.Asn618Lys
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn406Lys
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP

3-124393213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393213
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393213
    reference: chr 3
allele count: 9
allele frequency: 7.653321541549032e-5
allele num: 117596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6945C>T
  hgvsp: ENST00000360013.3:c.6945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1218C>T
  hgvsp: ENST00000459915.1:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1965C>T
  hgvsp: ENST00000393496.1:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1758C>T
  hgvsp: ENST00000428018.2:c.1758C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6851C>T
  hgvsp: ENST00000354186.4:c.6851C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1854C>T
  hgvsp: ENST00000291478.5:c.1854C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8532
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1965C>T
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

3-124393214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393214
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393214
    reference: chr 3
allele count: 6
allele frequency: 5.083453359315428e-5
allele num: 118030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6852G>A
  hgvsp: ENSP00000346122.4:p.Asp2285Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1219G>A
  hgvsp: ENSP00000420318.1:p.Asp407Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1759G>A
  hgvsp: ENSP00000402419.2:p.Asp587Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1855G>A
  hgvsp: ENSP00000291478.4:p.Asp619Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6946G>A
  hgvsp: ENSP00000353109.3:p.Asp2316Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1966G>A
  hgvsp: ENSP00000377134.1:p.Asp656Asn
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15767
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp407Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

3-124393220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393220
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393220
    reference: chr 3
allele count: 1
allele frequency: 8.404350091607416e-6
allele num: 118986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6858G>A
  hgvsp: ENSP00000346122.4:p.Gly2287Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1861G>A
  hgvsp: ENSP00000291478.4:p.Gly621Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1765G>A
  hgvsp: ENSP00000402419.2:p.Gly589Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6952G>A
  hgvsp: ENSP00000353109.3:p.Gly2318Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1225G>A
  hgvsp: ENSP00000420318.1:p.Gly409Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1972G>A
  hgvsp: ENSP00000377134.1:p.Gly658Arg
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly409Arg
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-124393226-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393226
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393226
    reference: chr 3
allele count: 7
allele frequency: 5.853625903130854e-5
allele num: 119584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1978T>C
  hgvsp: ENSP00000377134.1:p.Cys660Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6864T>C
  hgvsp: ENSP00000346122.4:p.Cys2289Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6958T>C
  hgvsp: ENSP00000353109.3:p.Cys2320Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1867T>C
  hgvsp: ENSP00000291478.4:p.Cys623Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1771T>C
  hgvsp: ENSP00000402419.2:p.Cys591Arg
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1231T>C
  hgvsp: ENSP00000420318.1:p.Cys411Arg
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30398
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8642
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys411Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

3-124393230-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393230
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393230
    reference: chr 3
allele count: 1
allele frequency: 8.327920185212944e-6
allele num: 120078
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1775A>G
  hgvsp: ENSP00000402419.2:p.Asn592Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1235A>G
  hgvsp: ENSP00000420318.1:p.Asn412Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1982A>G
  hgvsp: ENSP00000377134.1:p.Asn661Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6962A>G
  hgvsp: ENSP00000353109.3:p.Asn2321Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1871A>G
  hgvsp: ENSP00000291478.4:p.Asn624Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6868A>G
  hgvsp: ENSP00000346122.4:p.Asn2290Ser
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn412Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-124393236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393236
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393236
    reference: chr 3
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1988C>T
  hgvsp: ENSP00000377134.1:p.Thr663Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6874C>T
  hgvsp: ENSP00000346122.4:p.Thr2292Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6968C>T
  hgvsp: ENSP00000353109.3:p.Thr2323Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1877C>T
  hgvsp: ENSP00000291478.4:p.Thr626Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1241C>T
  hgvsp: ENSP00000420318.1:p.Thr414Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1781C>T
  hgvsp: ENSP00000402419.2:p.Thr594Ile
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr414Ile
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-124393239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393239
    reference: chr 3
allele count: 5
allele frequency: 4.145936981757877e-5
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1991C>T
  hgvsp: ENSP00000377134.1:p.Ser664Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1244C>T
  hgvsp: ENSP00000420318.1:p.Ser415Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1880C>T
  hgvsp: ENSP00000291478.4:p.Ser627Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1784C>T
  hgvsp: ENSP00000402419.2:p.Ser595Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6877C>T
  hgvsp: ENSP00000346122.4:p.Ser2293Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6971C>T
  hgvsp: ENSP00000353109.3:p.Ser2324Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8718
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser415Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

3-124393240-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393240
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393240
    reference: chr 3
allele count: 2
allele frequency: 1.656808655168415e-5
allele num: 120714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1245G>A
  hgvsp: ENST00000459915.1:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1881G>A
  hgvsp: ENST00000291478.5:c.1881G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1992G>A
  hgvsp: ENST00000393496.1:c.1992G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1785G>A
  hgvsp: ENST00000428018.2:c.1785G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6972G>A
  hgvsp: ENST00000360013.3:c.6972G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6878G>A
  hgvsp: ENST00000354186.4:c.6878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43853
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser415Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

3-124393242-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393242
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393242
    reference: chr 3
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1247C>G
  hgvsp: ENSP00000420318.1:p.Ser416Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1883C>G
  hgvsp: ENSP00000291478.4:p.Ser628Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6880C>G
  hgvsp: ENSP00000346122.4:p.Ser2294Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1994C>G
  hgvsp: ENSP00000377134.1:p.Ser665Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6974C>G
  hgvsp: ENSP00000353109.3:p.Ser2325Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1787C>G
  hgvsp: ENSP00000402419.2:p.Ser596Cys
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser416Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-124393244-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393244
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393244
    reference: chr 3
allele count: 1
allele frequency: 8.269520202437855e-6
allele num: 120926
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.1996A>T
  hgvsp: ENSP00000377134.1:p.Met666Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1885A>T
  hgvsp: ENSP00000291478.4:p.Met629Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6882A>T
  hgvsp: ENSP00000346122.4:p.Met2295Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6976A>T
  hgvsp: ENSP00000353109.3:p.Met2326Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1249A>T
  hgvsp: ENSP00000420318.1:p.Met417Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1789A>T
  hgvsp: ENSP00000402419.2:p.Met597Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Met417Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

3-124393249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393249
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393249
    reference: chr 3
allele count: 3
allele frequency: 2.477046040029064e-5
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1254C>T
  hgvsp: ENST00000459915.1:c.1254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2001C>T
  hgvsp: ENST00000393496.1:c.2001C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1794C>T
  hgvsp: ENST00000428018.2:c.1794C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6887C>T
  hgvsp: ENST00000354186.4:c.6887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1890C>T
  hgvsp: ENST00000291478.5:c.1890C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6981C>T
  hgvsp: ENST00000360013.3:c.6981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44301
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala418Ala
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

3-124393250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393250
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393250
    reference: chr 3
allele count: 5
allele frequency: 4.126229616425695e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1795G>A
  hgvsp: ENSP00000402419.2:p.Val599Met
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.6982G>A
  hgvsp: ENSP00000353109.3:p.Val2328Met
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6888G>A
  hgvsp: ENSP00000346122.4:p.Val2297Met
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1891G>A
  hgvsp: ENSP00000291478.4:p.Val631Met
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2002G>A
  hgvsp: ENSP00000377134.1:p.Val668Met
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1255G>A
  hgvsp: ENSP00000420318.1:p.Val419Met
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val419Met
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-124393275-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393275
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393275
    reference: chr 3
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1916A>C
  hgvsp: ENSP00000291478.4:p.Lys639Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6913A>C
  hgvsp: ENSP00000346122.4:p.Lys2305Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2027A>C
  hgvsp: ENSP00000377134.1:p.Lys676Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1820A>C
  hgvsp: ENSP00000402419.2:p.Lys607Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7007A>C
  hgvsp: ENSP00000353109.3:p.Lys2336Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1280A>C
  hgvsp: ENSP00000420318.1:p.Lys427Thr
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8778
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys427Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

3-124393302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393302
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393302
    reference: chr 3
allele count: 17
allele frequency: 1.401068108393222e-4
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1847G>A
  hgvsp: ENSP00000402419.2:p.Gly616Asp
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6940G>A
  hgvsp: ENSP00000346122.4:p.Gly2314Asp
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2054G>A
  hgvsp: ENSP00000377134.1:p.Gly685Asp
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1307G>A
  hgvsp: ENSP00000420318.1:p.Gly436Asp
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1943G>A
  hgvsp: ENSP00000291478.4:p.Gly648Asp
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7034G>A
  hgvsp: ENSP00000353109.3:p.Gly2345Asp
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31085
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8740
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly436Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

3-124393303-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393303
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393303
    reference: chr 3
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7035T>A
  hgvsp: ENST00000360013.3:c.7035T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6941T>A
  hgvsp: ENST00000354186.4:c.6941T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1308T>A
  hgvsp: ENST00000459915.1:c.1308T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1944T>A
  hgvsp: ENST00000291478.5:c.1944T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2055T>A
  hgvsp: ENST00000393496.1:c.2055T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1848T>A
  hgvsp: ENST00000428018.2:c.1848T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly436Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

3-124393306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393306
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393306
    reference: chr 3
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1851G>A
  hgvsp: ENST00000428018.2:c.1851G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1311G>A
  hgvsp: ENST00000459915.1:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6944G>A
  hgvsp: ENST00000354186.4:c.6944G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2058G>A
  hgvsp: ENST00000393496.1:c.2058G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1947G>A
  hgvsp: ENST00000291478.5:c.1947G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7038G>A
  hgvsp: ENST00000360013.3:c.7038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9632
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44567
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu437Glu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

3-124393316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393316
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393316
    reference: chr 3
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1321G>A
  hgvsp: ENSP00000420318.1:p.Val441Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7048G>A
  hgvsp: ENSP00000353109.3:p.Val2350Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6954G>A
  hgvsp: ENSP00000346122.4:p.Val2319Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2068G>A
  hgvsp: ENSP00000377134.1:p.Val690Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1957G>A
  hgvsp: ENSP00000291478.4:p.Val653Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1861G>A
  hgvsp: ENSP00000402419.2:p.Val621Ile
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2459
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val441Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

3-124393318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393318
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393318
    reference: chr 3
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2070C>T
  hgvsp: ENST00000393496.1:c.2070C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1863C>T
  hgvsp: ENST00000428018.2:c.1863C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1959C>T
  hgvsp: ENST00000291478.5:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1323C>T
  hgvsp: ENST00000459915.1:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7050C>T
  hgvsp: ENST00000360013.3:c.7050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6956C>T
  hgvsp: ENST00000354186.4:c.6956C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8619
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44386
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val441Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

3-124393321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393321
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393321
    reference: chr 3
allele count: 6
allele frequency: 4.953274114189479e-5
allele num: 121132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2073C>T
  hgvsp: ENST00000393496.1:c.2073C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1866C>T
  hgvsp: ENST00000428018.2:c.1866C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7053C>T
  hgvsp: ENST00000360013.3:c.7053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1962C>T
  hgvsp: ENST00000291478.5:c.1962C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1326C>T
  hgvsp: ENST00000459915.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6959C>T
  hgvsp: ENST00000354186.4:c.6959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu442Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

3-124393322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393322
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393322
    reference: chr 3
allele count: 5
allele frequency: 4.127728428491233e-5
allele num: 121132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1327G>A
  hgvsp: ENSP00000420318.1:p.Ala443Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1963G>A
  hgvsp: ENSP00000291478.4:p.Ala655Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2074G>A
  hgvsp: ENSP00000377134.1:p.Ala692Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1867G>A
  hgvsp: ENSP00000402419.2:p.Ala623Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6960G>A
  hgvsp: ENSP00000346122.4:p.Ala2321Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7054G>A
  hgvsp: ENSP00000353109.3:p.Ala2352Thr
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala443Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

3-124393324-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393324
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393324
    reference: chr 3
allele count: 13
allele frequency: 1.073581633495747e-4
allele num: 121090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1869C>T
  hgvsp: ENST00000428018.2:c.1869C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1329C>T
  hgvsp: ENST00000459915.1:c.1329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1965C>T
  hgvsp: ENST00000291478.5:c.1965C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6962C>T
  hgvsp: ENST00000354186.4:c.6962C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2076C>T
  hgvsp: ENST00000393496.1:c.2076C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7056C>T
  hgvsp: ENST00000360013.3:c.7056C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9281
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30804
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala443Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

3-124393325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393325
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393325
    reference: chr 3
allele count: 3
allele frequency: 2.477577919825579e-5
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1966G>A
  hgvsp: ENSP00000291478.4:p.Val656Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1870G>A
  hgvsp: ENSP00000402419.2:p.Val624Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7057G>A
  hgvsp: ENSP00000353109.3:p.Val2353Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1330G>A
  hgvsp: ENSP00000420318.1:p.Val444Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6963G>A
  hgvsp: ENSP00000346122.4:p.Val2322Ile
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2077G>A
  hgvsp: ENSP00000377134.1:p.Val693Ile
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val444Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

3-124393340-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393340
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393340
    reference: chr 3
allele count: 2
allele frequency: 1.655793621882969e-5
allele num: 120788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2092A>G
  hgvsp: ENSP00000377134.1:p.Met698Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6978A>G
  hgvsp: ENSP00000346122.4:p.Met2327Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7072A>G
  hgvsp: ENSP00000353109.3:p.Met2358Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1345A>G
  hgvsp: ENSP00000420318.1:p.Met449Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1981A>G
  hgvsp: ENSP00000291478.4:p.Met661Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1885A>G
  hgvsp: ENSP00000402419.2:p.Met629Val
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8820
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met449Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

3-124393343-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393343
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393343
    reference: chr 3
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2095T>A
  hgvsp: ENSP00000377134.1:p.Cys699Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1888T>A
  hgvsp: ENSP00000402419.2:p.Cys630Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.1984T>A
  hgvsp: ENSP00000291478.4:p.Cys662Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.6981T>A
  hgvsp: ENSP00000346122.4:p.Cys2328Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1348T>A
  hgvsp: ENSP00000420318.1:p.Cys450Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7075T>A
  hgvsp: ENSP00000353109.3:p.Cys2359Ser
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30058
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys450Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-124393364-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393364
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393364
    reference: chr 3
allele count: 1
allele frequency: 8.372124175345769e-6
allele num: 119444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2116A>T
  hgvsp: ENSP00000377134.1:p.Ser706Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2005A>T
  hgvsp: ENSP00000291478.4:p.Ser669Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1909A>T
  hgvsp: ENSP00000402419.2:p.Ser637Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7002A>T
  hgvsp: ENSP00000346122.4:p.Ser2335Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1369A>T
  hgvsp: ENSP00000420318.1:p.Ser457Cys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7096A>T
  hgvsp: ENSP00000353109.3:p.Ser2366Cys
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42329
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser457Cys
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

3-124393367-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393367
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393367
    reference: chr 3
allele count: 4
allele frequency: 3.361231555241841e-5
allele num: 119004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2119G>A
  hgvsp: ENSP00000377134.1:p.Asp707Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1372G>A
  hgvsp: ENSP00000420318.1:p.Asp458Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2008G>A
  hgvsp: ENSP00000291478.4:p.Asp670Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1912G>A
  hgvsp: ENSP00000402419.2:p.Asp638Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7005G>A
  hgvsp: ENSP00000346122.4:p.Asp2336Asn
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7099G>A
  hgvsp: ENSP00000353109.3:p.Asp2367Asn
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27740
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18918
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6975
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp458Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

3-124393375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393375
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393375
    reference: chr 3
allele count: 1
allele frequency: 8.50210001870462e-6
allele num: 117618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7107C>T
  hgvsp: ENST00000360013.3:c.7107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1920C>T
  hgvsp: ENST00000428018.2:c.1920C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7013C>T
  hgvsp: ENST00000354186.4:c.7013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1380C>T
  hgvsp: ENST00000459915.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2016C>T
  hgvsp: ENST00000291478.5:c.2016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2127C>T
  hgvsp: ENST00000393496.1:c.2127C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18748
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser460Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

3-124393377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393377
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393377
    reference: chr 3
allele count: 4
allele frequency: 3.407561378699334e-5
allele num: 117386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7109C>T
  hgvsp: ENSP00000353109.3:p.Pro2370Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2129C>T
  hgvsp: ENSP00000377134.1:p.Pro710Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1922C>T
  hgvsp: ENSP00000402419.2:p.Pro641Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2018C>T
  hgvsp: ENSP00000291478.4:p.Pro673Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1382C>T
  hgvsp: ENSP00000420318.1:p.Pro461Leu
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7015C>T
  hgvsp: ENSP00000346122.4:p.Pro2339Leu
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26038
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro461Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-124393378-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393378
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393378
    reference: chr 3
allele count: 8
allele frequency: 6.828735318219065e-5
allele num: 117152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2019C>T
  hgvsp: ENST00000291478.5:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7110C>T
  hgvsp: ENST00000360013.3:c.7110C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7016C>T
  hgvsp: ENST00000354186.4:c.7016C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1923C>T
  hgvsp: ENST00000428018.2:c.1923C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1383C>T
  hgvsp: ENST00000459915.1:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2130C>T
  hgvsp: ENST00000393496.1:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25796
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro461Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

3-124393379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393379
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393379
    reference: chr 3
allele count: 2
allele frequency: 1.712768690588336e-5
allele num: 116770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7017G>A
  hgvsp: ENSP00000346122.4:p.Ala2340Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1384G>A
  hgvsp: ENSP00000420318.1:p.Ala462Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2020G>A
  hgvsp: ENSP00000291478.4:p.Ala674Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2131G>A
  hgvsp: ENSP00000377134.1:p.Ala711Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1924G>A
  hgvsp: ENSP00000402419.2:p.Ala642Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7111G>A
  hgvsp: ENSP00000353109.3:p.Ala2371Thr
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3421
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19290
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala462Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

3-124393380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393380
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393380
    reference: chr 3
allele count: 22
allele frequency: 1.88311021330503e-4
allele num: 116828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1385C>T
  hgvsp: ENSP00000420318.1:p.Ala462Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1925C>T
  hgvsp: ENSP00000402419.2:p.Ala642Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2132C>T
  hgvsp: ENSP00000377134.1:p.Ala711Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2021C>T
  hgvsp: ENSP00000291478.4:p.Ala674Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7018C>T
  hgvsp: ENSP00000346122.4:p.Ala2340Val
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7112C>T
  hgvsp: ENSP00000353109.3:p.Ala2371Val
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25192
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6015
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala462Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/3-124393381-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393381
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393381
    reference: chr 3
allele count: 1
allele frequency: 8.564870327863236e-6
allele num: 116756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1386C>A
  hgvsp: ENST00000459915.1:c.1386C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7113C>A
  hgvsp: ENST00000360013.3:c.7113C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7019C>A
  hgvsp: ENST00000354186.4:c.7019C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2133C>A
  hgvsp: ENST00000393496.1:c.2133C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2022C>A
  hgvsp: ENST00000291478.5:c.2022C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1926C>A
  hgvsp: ENST00000428018.2:c.1926C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala462Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

3-124393382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393382
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393382
    reference: chr 3
allele count: 2
allele frequency: 1.717799841962415e-5
allele num: 116428
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2134G>A
  hgvsp: ENSP00000377134.1:p.Ala712Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1927G>A
  hgvsp: ENSP00000402419.2:p.Ala643Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1387G>A
  hgvsp: ENSP00000420318.1:p.Ala463Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7020G>A
  hgvsp: ENSP00000346122.4:p.Ala2341Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7114G>A
  hgvsp: ENSP00000353109.3:p.Ala2372Thr
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2023G>A
  hgvsp: ENSP00000291478.4:p.Ala675Thr
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala463Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-124393382-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393382
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393382
    reference: chr 3
allele count: 1
allele frequency: 8.588999209812073e-6
allele num: 116428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7020G>T
  hgvsp: ENSP00000346122.4:p.Ala2341Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2134G>T
  hgvsp: ENSP00000377134.1:p.Ala712Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7114G>T
  hgvsp: ENSP00000353109.3:p.Ala2372Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1387G>T
  hgvsp: ENSP00000420318.1:p.Ala463Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2023G>T
  hgvsp: ENSP00000291478.4:p.Ala675Ser
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1927G>T
  hgvsp: ENSP00000402419.2:p.Ala643Ser
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala463Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/3-124393384-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393384
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393384
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 116274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7116C>A
  hgvsp: ENST00000360013.3:c.7116C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7022C>A
  hgvsp: ENST00000354186.4:c.7022C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1389C>A
  hgvsp: ENST00000459915.1:c.1389C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1929C>A
  hgvsp: ENST00000428018.2:c.1929C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2025C>A
  hgvsp: ENST00000291478.5:c.2025C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2136C>A
  hgvsp: ENST00000393496.1:c.2136C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20112
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala463Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

3-124393384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393384
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393384
    reference: chr 3
allele count: 2
allele frequency: 1.720074995269794e-5
allele num: 116274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2136C>T
  hgvsp: ENST00000393496.1:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7022C>T
  hgvsp: ENST00000354186.4:c.7022C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7116C>T
  hgvsp: ENST00000360013.3:c.7116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2025C>T
  hgvsp: ENST00000291478.5:c.2025C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1389C>T
  hgvsp: ENST00000459915.1:c.1389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1929C>T
  hgvsp: ENST00000428018.2:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5806
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala463Ala
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

3-124393385-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393385
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393385
    reference: chr 3
allele count: 8
allele frequency: 6.890730245137728e-5
allele num: 116098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2137G>A
  hgvsp: ENSP00000377134.1:p.Glu713Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1390G>A
  hgvsp: ENSP00000420318.1:p.Glu464Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7117G>A
  hgvsp: ENSP00000353109.3:p.Glu2373Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7023G>A
  hgvsp: ENSP00000346122.4:p.Glu2342Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2026G>A
  hgvsp: ENSP00000291478.4:p.Glu676Lys
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1930G>A
  hgvsp: ENSP00000402419.2:p.Glu644Lys
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24206
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5037
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu464Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

3-124393396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393396
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393396
    reference: chr 3
allele count: 1
allele frequency: 8.781790080089925e-6
allele num: 113872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1401C>T
  hgvsp: ENST00000459915.1:c.1401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2148C>T
  hgvsp: ENST00000393496.1:c.2148C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7034C>T
  hgvsp: ENST00000354186.4:c.7034C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1941C>T
  hgvsp: ENST00000428018.2:c.1941C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2037C>T
  hgvsp: ENST00000291478.5:c.2037C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7128C>T
  hgvsp: ENST00000360013.3:c.7128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20066
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6943
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val467Val
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

3-124393399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124393399
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 124393399
    reference: chr 3
allele count: 8
allele frequency: 7.062770371678291e-5
allele num: 113270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000402419
  ensembl transcript: ENST00000428018
  gene symbol: KALRN
  hgvsc: ENST00000428018.2:c.1944A>G
  hgvsp: ENST00000428018.2:c.1944A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000291478
  ensembl transcript: ENST00000291478
  gene symbol: KALRN
  hgvsc: ENST00000291478.5:c.2040A>G
  hgvsp: ENST00000291478.5:c.2040A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000420318
  ensembl transcript: ENST00000459915
  gene symbol: KALRN
  hgvsc: ENST00000459915.1:c.1404A>G
  hgvsp: ENST00000459915.1:c.1404A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000377134
  ensembl transcript: ENST00000393496
  gene symbol: KALRN
  hgvsc: ENST00000393496.1:c.2151A>G
  hgvsp: ENST00000393496.1:c.2151A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000353109
  ensembl transcript: ENST00000360013
  gene symbol: KALRN
  hgvsc: ENST00000360013.3:c.7131A>G
  hgvsp: ENST00000360013.3:c.7131A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160145
  ensembl protein: ENSP00000346122
  ensembl transcript: ENST00000354186
  gene symbol: KALRN
  hgvsc: ENST00000354186.4:c.7037A>G
  hgvsp: ENST00000354186.4:c.7037A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4814
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5436
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20019
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro468Pro
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.771350400625366e-5
allele num: 10234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.908e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.948e0

QD
type: SiteQuality
SIO_000300: 1.123e1

VQSLOD
type: SiteQuality
SIO_000300: -5.202e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 3.213011e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.077e0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.934846409704559e-4
allele num: 10222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.21261e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.76e0

QD
type: SiteQuality
SIO_000300: 1.472e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45869
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7185
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

VQSLOD
type: SiteQuality
SIO_000300: 7.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.854e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 3.209294e6

QD
type: SiteQuality
SIO_000300: 1.292e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45868
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515427047341941e-5
allele num: 65988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83671060397403e-5
allele num: 10166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.753e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 3.207347e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e0

QD
type: SiteQuality
SIO_000300: 1.156e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 964
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 738
allele frequency: 4.49616181308639e-2
allele num: 16414
num of homozygotes: 20

European (Non-Finnish)
type: Population
allele count: 1339
allele frequency: 2.03038757809183e-2
allele num: 65948
num of homozygotes: 15

Latino
type: Population
allele count: 556
allele frequency: 4.808024904877205e-2
allele num: 11564
num of homozygotes: 23

Other
type: Population
allele count: 23
allele frequency: 2.561247216035635e-2
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 56
allele frequency: 8.466888418506199e-3
allele num: 6614
num of homozygotes: 1

East Asian
type: Population
allele count: 797
allele frequency: 9.235225955967555e-2
allele num: 8630
num of homozygotes: 31

African
type: Population
allele count: 91
allele frequency: 8.960220559275305e-3
allele num: 10156
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 6.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.97e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.659e0

DP
type: SiteQuality
SIO_000300: 3.598744e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 956
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46122
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 727
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.076257025672186e-5
allele num: 65830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.753e0

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.28e-1

DP
type: SiteQuality
SIO_000300: 3.297085e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 1.29e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.989e0

GenotypeQuality
all individuals: 590
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46122
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.117709631340607e-5
allele num: 65806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.116e1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.655e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 2.477e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

DP
type: SiteQuality
SIO_000300: 3.296876e6

GenotypeQuality
all individuals: 1260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.46e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

DP
type: SiteQuality
SIO_000300: 3.295874e6

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.299e1

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 1.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 3.293269e6

GenotypeQuality
all individuals: 1258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65668
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.055363321799307e-4
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.299e1

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 3.293269e6

VQSLOD
type: SiteQuality
SIO_000300: 8.95e-1

FS
type: SiteQuality
SIO_000300: 1.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1495
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46142
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

African
type: Population
allele count: 45
allele frequency: 4.469606674612634e-3
allele num: 10068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.046644121500167e-5
allele num: 65646
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.109e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

QD
type: SiteQuality
SIO_000300: 1.239e1

DP
type: SiteQuality
SIO_000300: 3.296068e6

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

GenotypeQuality
all individuals: 200
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46126
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65248
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.356470887363335e-5
allele num: 15732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.932e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

DP
type: SiteQuality
SIO_000300: 3.27069e6

FS
type: SiteQuality
SIO_000300: 4.633e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.111e0

GenotypeQuality
all individuals: 373
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 935
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46127
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.35970490969219e-5
allele num: 15724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 7.8e0

DP
type: SiteQuality
SIO_000300: 3.27047e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.339e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4160
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46127
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 916
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64990
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.255111e6

FS
type: SiteQuality
SIO_000300: 3.099e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.698821007502679e-5
allele num: 14928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

DP
type: SiteQuality
SIO_000300: 3.226878e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.99e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 1073
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46129
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55574224462491e-5
allele num: 64278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14760
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 3.220792e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 5.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.233e1

MQ
type: SiteQuality
SIO_000300: 5.994e1

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 893
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14760
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

DP
type: SiteQuality
SIO_000300: 3.219511e6

FS
type: SiteQuality
SIO_000300: 8.656000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.902e1

VQSLOD
type: SiteQuality
SIO_000300: -9.599e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.28e0

GenotypeQuality
all individuals: 302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46131
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 711
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.248437890527369e-5
allele num: 64016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.21457e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

FS
type: SiteQuality
SIO_000300: 1.273e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 1255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.379500620775279e-4
allele num: 14498
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63982
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.859e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.934e0

FS
type: SiteQuality
SIO_000300: 2.788e0

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.471e0

DP
type: SiteQuality
SIO_000300: 3.213194e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

QD
type: SiteQuality
SIO_000300: 2.006e1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46130
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.562939576755963e-5
allele num: 63982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 3.213194e6

FS
type: SiteQuality
SIO_000300: 2.788e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.934e0

MQ
type: SiteQuality
SIO_000300: 5.859e1

QD
type: SiteQuality
SIO_000300: 2.006e1

VQSLOD
type: SiteQuality
SIO_000300: -1.471e0

GenotypeQuality
all individuals: 304
bin: 4.75e1
variant carriers: 57

GenotypeQuality
all individuals: 919
bin: 9.25e1
variant carriers: 65

GenotypeQuality
all individuals: 214
bin: 5.25e1
variant carriers: 70

GenotypeQuality
all individuals: 571
bin: 8.75e1
variant carriers: 76

GenotypeQuality
all individuals: 696
bin: 8.25e1
variant carriers: 72

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 46

GenotypeQuality
all individuals: 49362
bin: 9.75e1
variant carriers: 17771

Other
type: Population
allele count: 142
allele frequency: 1.655011655011655e-1
allele num: 858
num of homozygotes: 8

Latino
type: Population
allele count: 921
allele frequency: 8.005910987482615e-2
allele num: 11504
num of homozygotes: 35

South Asian
type: Population
allele count: 2084
allele frequency: 1.528083296671066e-1
allele num: 13638
num of homozygotes: 182

African
type: Population
allele count: 2039
allele frequency: 2.159957627118644e-1
allele num: 9440
num of homozygotes: 216

East Asian
type: Population
allele count: 1624
allele frequency: 1.896753095071245e-1
allele num: 8562
num of homozygotes: 141

European (Non-Finnish)
type: Population
allele count: 11493
allele frequency: 1.811404614802673e-1
allele num: 63448
num of homozygotes: 1013

European (Finnish)
type: Population
allele count: 1463
allele frequency: 2.21264367816092e-1
allele num: 6612
num of homozygotes: 148

QD
type: SiteQuality
SIO_000300: 1.56e1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

FS
type: SiteQuality
SIO_000300: 8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

DP
type: SiteQuality
SIO_000300: 3.747375e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.845e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 1720
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.887284951552304e-5
allele num: 10114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.063e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.854e0

QD
type: SiteQuality
SIO_000300: 1.086e1

DP
type: SiteQuality
SIO_000300: 1.547621e6

MQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 994
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8353
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.101640767966254e-5
allele num: 64482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.547708e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

QD
type: SiteQuality
SIO_000300: 1.42e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38636
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550724188195888e-5
allele num: 64486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.547807e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 9.75e1
variant carriers: 10

South Asian
type: Population
allele count: 1
allele frequency: 9.759906304899473e-5
allele num: 10246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.084262701363073e-4
allele num: 64560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73973556019485e-4
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 1.553937e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.48e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.302e1

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39255
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64588
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.662e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.08e-1

DP
type: SiteQuality
SIO_000300: 1.555538e6

QD
type: SiteQuality
SIO_000300: 1.301e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 7.276e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 973
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547508511296812e-5
allele num: 64620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.558286e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.078e0

QD
type: SiteQuality
SIO_000300: 1.362e1

FS
type: SiteQuality
SIO_000300: 2.331e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.55e-1

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166316771635176e-4
allele num: 8574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.078e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 1.558286e6

FS
type: SiteQuality
SIO_000300: 2.331e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.35e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.47867298578199e-5
allele num: 10550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.560053e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.549e0

FS
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

QD
type: SiteQuality
SIO_000300: 1.09e1

GenotypeQuality
all individuals: 292
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.769060365515968e-4
allele num: 10834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.137e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

FS
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.563793e6

GenotypeQuality
all individuals: 300
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542638528939899e-5
allele num: 64824
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.565099e6

FS
type: SiteQuality
SIO_000300: 6.717e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.158e1

GenotypeQuality
all individuals: 473
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 486
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540120129370091e-5
allele num: 64930
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.568271e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.328e0

MQ
type: SiteQuality
SIO_000300: 5.862e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.056e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.121e1

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 909
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 8451
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 31
allele frequency: 2.534750613246116e-3
allele num: 12230
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

DP
type: SiteQuality
SIO_000300: 1.580564e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.298e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8532
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.654373431164318e-5
allele num: 10358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.034e1

DP
type: SiteQuality
SIO_000300: 1.600076e6

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.472222222222222e-4
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.449485432671402e-4
allele num: 13798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.082725060827251e-5
allele num: 65760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.87e-1

QD
type: SiteQuality
SIO_000300: 1.034e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.600076e6

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

GenotypeQuality
all individuals: 41970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.41622999575131e-4
allele num: 14122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.555947029522537e-5
allele num: 65848
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.603078e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

QD
type: SiteQuality
SIO_000300: 1.148e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.851e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 4.732e0

DP
type: SiteQuality
SIO_000300: 1.612464e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

QD
type: SiteQuality
SIO_000300: 4.86e0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.778120184899846e-4
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.547930853850184e-5
allele num: 15272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.084e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.9e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.619165e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

FS
type: SiteQuality
SIO_000300: 1.767e0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.82e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

DP
type: SiteQuality
SIO_000300: 1.624183e6

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66420
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.628883e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.58e-2

MQ
type: SiteQuality
SIO_000300: 5.935e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

FS
type: SiteQuality
SIO_000300: 2.067e0

QD
type: SiteQuality
SIO_000300: 1.799e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.139e0

GenotypeQuality
all individuals: 974
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504981488727689e-5
allele num: 66446
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

DP
type: SiteQuality
SIO_000300: 1.631403e6

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.388e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

QD
type: SiteQuality
SIO_000300: 1.056e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 94
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 375
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.242236024844721e-4
allele num: 16100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.868e0

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.49e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.447e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 1.632413e6

GenotypeQuality
all individuals: 44012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.059e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.565e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.634211e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.191e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.84e-1

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.266e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.156e-1

FS
type: SiteQuality
SIO_000300: 9.218e0

DP
type: SiteQuality
SIO_000300: 1.635259e6

GenotypeQuality
all individuals: 2340
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8765
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.638422e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

FS
type: SiteQuality
SIO_000300: 1.882e0

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 9.72e-1

QD
type: SiteQuality
SIO_000300: 1.313e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

GenotypeQuality
all individuals: 293
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44359
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2545
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8769
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003662233962717e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 1.348e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

DP
type: SiteQuality
SIO_000300: 1.638862e6

MQRankSum
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 9.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.453e0

QD
type: SiteQuality
SIO_000300: 9.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 1.640729e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44584
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.39880059970015e-4
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.63884e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.94e-1

QD
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: -1.75e-2

FS
type: SiteQuality
SIO_000300: 1.309e0

DP
type: SiteQuality
SIO_000300: 1.637912e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.522e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

DP
type: SiteQuality
SIO_000300: 1.637081e6

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.543e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.24e-1

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8622
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.631192e6

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.146e0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.049e0

DP
type: SiteQuality
SIO_000300: 1.630903e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e0

QD
type: SiteQuality
SIO_000300: 6.04e0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8586
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732801940738174e-4
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.891287586738628e-4
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.988e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.628193e6

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.019e0

MQRankSum
type: SiteQuality
SIO_000300: -4.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 8569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001831116981359e-5
allele num: 66626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070908207867897e-5
allele num: 16472
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.627221e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.071e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.042e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 2414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8532
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44158
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.03950103950104e-3
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 1.298e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.176e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 1.624481e6

GenotypeQuality
all individuals: 8508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504369238161016e-5
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.623367e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.295e1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e-1

GenotypeQuality
all individuals: 2319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43848
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.391e1

FS
type: SiteQuality
SIO_000300: 1.189e0

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

DP
type: SiteQuality
SIO_000300: 1.604872e6

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506024096385542e-5
allele num: 66400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.658e0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

FS
type: SiteQuality
SIO_000300: 2.05e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 1.599342e6

QD
type: SiteQuality
SIO_000300: 1.386e1

GenotypeQuality
all individuals: 487
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 651
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519618271890101e-5
allele num: 65806
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.548301e6

VQSLOD
type: SiteQuality
SIO_000300: -1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.77e0

GenotypeQuality
all individuals: 530
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41858
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.848335631278314e-5
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.579279848389134e-4
allele num: 6332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523182842868458e-5
allele num: 65652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.152073732718894e-3
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.537749e6

FS
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 3796
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38848
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53888769197624e-5
allele num: 64982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.848e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 1.499326e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.368e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 8.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.975e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 4030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38820
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.165038069110076e-5
allele num: 64882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.62e-1

QD
type: SiteQuality
SIO_000300: 1.158e1

DP
type: SiteQuality
SIO_000300: 1.491163e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

GenotypeQuality
all individuals: 1407
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38416
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.36630383341221e-4
allele num: 8452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.631344942571323e-5
allele num: 64776
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.862105636299185e-5
allele num: 11284
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.39386189258312e-5
allele num: 15640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002004008016032e-4
allele num: 9980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.938e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 1.486001e6

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.033e1

GenotypeQuality
all individuals: 1697
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36967
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5993
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.288327750579748e-4
allele num: 15524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.98e-1

DP
type: SiteQuality
SIO_000300: 1.473248e6

MQRankSum
type: SiteQuality
SIO_000300: -1.194e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.93e-1

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4500
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.094250881861501e-4
allele num: 64636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.253090435914119e-4
allele num: 6148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.7e-1

FS
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 1.470919e6

VQSLOD
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547604308530395e-5
allele num: 64616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

QD
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: -2.897e0

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

FS
type: SiteQuality
SIO_000300: 1.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.469715e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e-1

MQ
type: SiteQuality
SIO_000300: 5.843e1

GenotypeQuality
all individuals: 1399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551638530287984e-5
allele num: 64448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.483402489626556e-5
allele num: 15424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.555e0

FS
type: SiteQuality
SIO_000300: 4.07e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

QD
type: SiteQuality
SIO_000300: 1.08e1

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 1.460746e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.24e-1

GenotypeQuality
all individuals: 1399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37607
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5825
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11230
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187366421277606e-4
allele num: 8422
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.555e0

MQRankSum
type: SiteQuality
SIO_000300: -1.083e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.08e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.24e-1

FS
type: SiteQuality
SIO_000300: 4.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e0

DP
type: SiteQuality
SIO_000300: 1.460746e6

GenotypeQuality
all individuals: 1505
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64380
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.455077e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.606e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 3.194e0

QD
type: SiteQuality
SIO_000300: 3.18e0

GenotypeQuality
all individuals: 1279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4945
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188212927756654e-4
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553277415346381e-5
allele num: 64380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15374
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.606e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.455077e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 3.194e0

QD
type: SiteQuality
SIO_000300: 3.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

GenotypeQuality
all individuals: 1284
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38443
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554871412134217e-5
allele num: 64314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.525711302531976e-5
allele num: 15324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.836065573770492e-4
allele num: 6100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

QD
type: SiteQuality
SIO_000300: 1.314e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.447e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.87e-1

DP
type: SiteQuality
SIO_000300: 1.451121e6

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35647
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.690331304935767e-4
allele num: 5916
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.039e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 1.498e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.98e-1

FS
type: SiteQuality
SIO_000300: 3.976e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.397686e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.24e-1