1-109704650-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704650
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704650
    reference: chr 1
allele count: 1
allele frequency: 8.527620964303379e-6
allele num: 117266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2471C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2471C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+14C>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20297
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

1-109704662-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704662
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704662
    reference: chr 1
allele count: 1
allele frequency: 8.591803419537761e-6
allele num: 116390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2459T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2459T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+26T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2304
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

1-109704665-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704665
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704665
    reference: chr 1
allele count: 1
allele frequency: 8.60141063134354e-6
allele num: 116260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2456C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2456C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+29C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

1-109704669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704669
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704669
    reference: chr 1
allele count: 1
allele frequency: 8.622771013692961e-6
allele num: 115972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2452C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2452C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+33C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5471
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ

1-109704671-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704671
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704671
    reference: chr 1
allele count: 1
allele frequency: 8.630957518427095e-6
allele num: 115862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2450C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2450C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+35C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2941
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-109704680-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704680
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704680
    reference: chr 1
allele count: 1
allele frequency: 8.690060309018545e-6
allele num: 115074
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2441G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2441G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+44G>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9227
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

1-109704685-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704685
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704685
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 114550
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2436C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2436C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+49C>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8972
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5450
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-109704686-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704686
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704686
    reference: chr 1
allele count: 1
allele frequency: 8.75902179244622e-6
allele num: 114168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2435T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2435T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+50T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3241
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5915
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: T
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-109704687-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109704687
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109704687
    reference: chr 1
allele count: 1
allele frequency: 8.745692746322435e-6
allele num: 114342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.409+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-2434C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.274+51C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-2434C>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11584
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5951
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10468
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3801
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

1-109707070-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707070
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707070
    reference: chr 1
allele count: 1
allele frequency: 8.918219923303308e-6
allele num: 112130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-51T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-51T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2896
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

1-109707071-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707071
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707071
    reference: chr 1
allele count: 1
allele frequency: 8.91885624587503e-6
allele num: 112122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-50G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-50G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-109707090-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707090
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707090
    reference: chr 1
allele count: 1
allele frequency: 8.873114463176575e-6
allele num: 112700
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-31T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-31T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

1-109707091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707091
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707091
    reference: chr 1
allele count: 2
allele frequency: 1.774654386058315e-5
allele num: 112698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-30G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

1-109707092-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707092
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707092
    reference: chr 1
allele count: 1
allele frequency: 8.869651600085149e-6
allele num: 112744
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-29C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-29C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

1-109707093-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707093
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707093
    reference: chr 1
allele count: 137
allele frequency: 1.213785771241251e-3
allele num: 112870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-28C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-28C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14552
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26073
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7441
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10001
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-109707100-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707100
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707100
    reference: chr 1
allele count: 1
allele frequency: 8.814455707360071e-6
allele num: 113450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-21T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2122
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-109707101-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707101
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707101
    reference: chr 1
allele count: 1
allele frequency: 8.811504300014099e-6
allele num: 113488
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-20G>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

1-109707102-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707102
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707102
    reference: chr 1
allele count: 1
allele frequency: 8.807003329047259e-6
allele num: 113546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-19T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2120
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-109707105-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707105
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707105
    reference: chr 1
allele count: 1
allele frequency: 8.791981712678038e-6
allele num: 113740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275-16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154-16C>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10042
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-109707121-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707121
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707121
    reference: chr 1
allele count: 13
allele frequency: 1.124800996746729e-4
allele num: 115576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275C>A
  hgvsp: ENSP00000435066.1:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275C>A
  hgvsp: ENSP00000393964.2:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275C>A
  hgvsp: ENSP00000432164.1:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275C>A
  hgvsp: ENSP00000431349.1:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275C>A
  hgvsp: ENSP00000358955.3:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275C>A
  hgvsp: ENSP00000434595.1:p.Ser92Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154C>A
  hgvsp: ENSP00000432023.1:p.Pro52Thr
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser92Tyr
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-109707121-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707121
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707121
    reference: chr 1
allele count: 2
allele frequency: 1.730463071918045e-5
allele num: 115576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.275C>G
  hgvsp: ENSP00000393964.2:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.275C>G
  hgvsp: ENSP00000431349.1:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.275C>G
  hgvsp: ENSP00000358955.3:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.275C>G
  hgvsp: ENSP00000435066.1:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.165C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.410C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.275C>G
  hgvsp: ENSP00000432164.1:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.154C>G
  hgvsp: ENSP00000432023.1:p.Pro52Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.275C>G
  hgvsp: ENSP00000434595.1:p.Ser92Cys
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser92Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

1-109707122-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707122
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707122
    reference: chr 1
allele count: 1
allele frequency: 8.626341396087092e-6
allele num: 115924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.276C>T
  hgvsp: ENST00000531664.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.276C>T
  hgvsp: ENST00000369939.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.411C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.166C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.276C>T
  hgvsp: ENST00000534476.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.276C>T
  hgvsp: ENST00000526264.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.155C>T
  hgvsp: ENSP00000432023.1:p.Pro52Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.276C>T
  hgvsp: ENST00000457623.2:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.276C>T
  hgvsp: ENST00000529753.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2612
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro52Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-109707131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707131
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707131
    reference: chr 1
allele count: 1
allele frequency: 8.506584096090374e-6
allele num: 117556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.285C>T
  hgvsp: ENST00000529753.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.285C>T
  hgvsp: ENST00000526264.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.420C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.164C>T
  hgvsp: ENSP00000432023.1:p.Ala55Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.285C>T
  hgvsp: ENST00000531664.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.285C>T
  hgvsp: ENST00000534476.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.285C>T
  hgvsp: ENST00000457623.2:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.285C>T
  hgvsp: ENST00000369939.3:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.175C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala55Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-109707134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707134
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707134
    reference: chr 1
allele count: 6
allele frequency: 5.077344887113699e-5
allele num: 118172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.288C>T
  hgvsp: ENST00000531664.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.167C>T
  hgvsp: ENSP00000432023.1:p.Thr56Met
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.288C>T
  hgvsp: ENST00000369939.3:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.288C>T
  hgvsp: ENST00000457623.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.423C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.288C>T
  hgvsp: ENST00000526264.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.178C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.288C>T
  hgvsp: ENST00000534476.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.288C>T
  hgvsp: ENST00000529753.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr56Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

1-109707136-C-CCGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707136
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707139
    reference: chr 1
allele count: 3
allele frequency: 2.524997475002525e-5
allele num: 118812
alternate allele: CCGG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.291_293dupCGG
  hgvsp: ENSP00000434595.1:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.291_293dupCGG
  hgvsp: ENSP00000432164.1:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.291_293dupCGG
  hgvsp: ENSP00000435066.1:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.291_293dupCGG
  hgvsp: ENSP00000393964.2:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.181_183dupCGG
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.170_172dupCGG
  hgvsp: ENSP00000432023.1:p.Pro57_Gly58insAla
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.291_293dupCGG
  hgvsp: ENSP00000431349.1:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.291_293dupCGG
  hgvsp: ENSP00000358955.3:p.Gly98dup
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.426_428dupCGG
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10376
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly98dup
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

1-109707137-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707137
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707137
    reference: chr 1
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.181C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.170C>G
  hgvsp: ENSP00000432023.1:p.Pro57Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.291C>G
  hgvsp: ENST00000529753.1:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.291C>G
  hgvsp: ENST00000531664.1:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.291C>G
  hgvsp: ENST00000457623.2:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.291C>G
  hgvsp: ENST00000369939.3:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.291C>G
  hgvsp: ENST00000534476.1:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.291C>G
  hgvsp: ENST00000526264.1:c.291C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.426C>G
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro57Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD

1-109707137-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707137
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707137
    reference: chr 1
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.291C>T
  hgvsp: ENST00000457623.2:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.291C>T
  hgvsp: ENST00000534476.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.291C>T
  hgvsp: ENST00000526264.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.181C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.170C>T
  hgvsp: ENSP00000432023.1:p.Pro57Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.291C>T
  hgvsp: ENST00000531664.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.291C>T
  hgvsp: ENST00000529753.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.426C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.291C>T
  hgvsp: ENST00000369939.3:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37012
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro57Leu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-109707138-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707138
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707138
    reference: chr 1
allele count: 2
allele frequency: 1.674873547047198e-5
allele num: 119412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.292G>A
  hgvsp: ENSP00000432164.1:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.427G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.292G>A
  hgvsp: ENSP00000435066.1:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.292G>A
  hgvsp: ENSP00000393964.2:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.292G>A
  hgvsp: ENSP00000358955.3:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.171G>A
  hgvsp: ENST00000527996.1:c.171G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.292G>A
  hgvsp: ENSP00000431349.1:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.292G>A
  hgvsp: ENSP00000434595.1:p.Gly98Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.182G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly98Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

1-109707140-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707140
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707140
    reference: chr 1
allele count: 1
allele frequency: 8.351428094204109e-6
allele num: 119740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.294G>C
  hgvsp: ENST00000529753.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.294G>C
  hgvsp: ENST00000526264.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.294G>C
  hgvsp: ENST00000534476.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.173G>C
  hgvsp: ENSP00000432023.1:p.Gly58Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.294G>C
  hgvsp: ENST00000531664.1:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.294G>C
  hgvsp: ENST00000369939.3:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.429G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.294G>C
  hgvsp: ENST00000457623.2:c.294G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.184G>C
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14698
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10319
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly58Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-109707150-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707150
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707150
    reference: chr 1
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.304G>T
  hgvsp: ENSP00000432164.1:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.304G>T
  hgvsp: ENSP00000431349.1:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.304G>T
  hgvsp: ENSP00000435066.1:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.194G>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.304G>T
  hgvsp: ENSP00000393964.2:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.183G>T
  hgvsp: ENSP00000432023.1:p.Trp61Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.304G>T
  hgvsp: ENSP00000434595.1:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.304G>T
  hgvsp: ENSP00000358955.3:p.Asp102Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.439G>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp102Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-109707155-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707155
    reference: chr 1
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.309G>T
  hgvsp: ENSP00000432164.1:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.309G>T
  hgvsp: ENSP00000434595.1:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.199G>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.188G>T
  hgvsp: ENSP00000432023.1:p.Ter63LeuextTer74
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.309G>T
  hgvsp: ENSP00000431349.1:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.444G>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.309G>T
  hgvsp: ENSP00000393964.2:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.309G>T
  hgvsp: ENSP00000358955.3:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.309G>T
  hgvsp: ENSP00000435066.1:p.Met103Ile
  variant of: http://identifiers.org/hgnc/29618
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ter63LeuextTer74
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

1-109707162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707162
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707162
    reference: chr 1
allele count: 1
allele frequency: 8.265555775970376e-6
allele num: 120984
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.316C>T
  hgvsp: ENSP00000358955.3:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.316C>T
  hgvsp: ENSP00000431349.1:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.316C>T
  hgvsp: ENSP00000393964.2:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.451C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*6C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.316C>T
  hgvsp: ENSP00000434595.1:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.316C>T
  hgvsp: ENSP00000435066.1:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.316C>T
  hgvsp: ENSP00000432164.1:p.Gln106Ter
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.206C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln106Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

1-109707164-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707164
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707164
    reference: chr 1
allele count: 23
allele frequency: 1.900072698433679e-4
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.318G>A
  hgvsp: ENST00000534476.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.318G>A
  hgvsp: ENST00000457623.2:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.318G>A
  hgvsp: ENST00000526264.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.208G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.318G>A
  hgvsp: ENST00000369939.3:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.453G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.318G>A
  hgvsp: ENST00000531664.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.318G>A
  hgvsp: ENST00000529753.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38508
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10416
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln106Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-109707177-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707177
    reference: chr 1
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.331T>C
  hgvsp: ENSP00000434595.1:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.331T>C
  hgvsp: ENSP00000432164.1:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.221T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*21T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.331T>C
  hgvsp: ENSP00000393964.2:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.331T>C
  hgvsp: ENSP00000358955.3:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.466T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.331T>C
  hgvsp: ENSP00000431349.1:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.331T>C
  hgvsp: ENSP00000435066.1:p.Cys111Arg
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys111Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-109707178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707178
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707178
    reference: chr 1
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.332G>A
  hgvsp: ENSP00000434595.1:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.222G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.332G>A
  hgvsp: ENSP00000358955.3:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.332G>A
  hgvsp: ENSP00000431349.1:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.332G>A
  hgvsp: ENSP00000393964.2:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.467G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.332G>A
  hgvsp: ENSP00000432164.1:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.332G>A
  hgvsp: ENSP00000435066.1:p.Cys111Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10430
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys111Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum

1-109707179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707179
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707179
    reference: chr 1
allele count: 3
allele frequency: 2.473696362017217e-5
allele num: 121276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.333C>T
  hgvsp: ENST00000534476.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.333C>T
  hgvsp: ENST00000526264.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.333C>T
  hgvsp: ENST00000457623.2:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.333C>T
  hgvsp: ENST00000531664.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.333C>T
  hgvsp: ENST00000529753.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.333C>T
  hgvsp: ENST00000369939.3:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*23C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.223C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.468C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys111Cys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-109707183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707183
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707183
    reference: chr 1
allele count: 2
allele frequency: 1.648478454386601e-5
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.337G>A
  hgvsp: ENSP00000432164.1:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.337G>A
  hgvsp: ENSP00000434595.1:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.337G>A
  hgvsp: ENSP00000393964.2:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.337G>A
  hgvsp: ENSP00000435066.1:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.227G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.472G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.337G>A
  hgvsp: ENSP00000431349.1:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*27G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.337G>A
  hgvsp: ENSP00000358955.3:p.Glu113Lys
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu113Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-109707189-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707189
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707189
    reference: chr 1
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.343C>T
  hgvsp: ENSP00000432164.1:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.478C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.343C>T
  hgvsp: ENSP00000434595.1:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.343C>T
  hgvsp: ENSP00000358955.3:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.343C>T
  hgvsp: ENSP00000435066.1:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.343C>T
  hgvsp: ENSP00000431349.1:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.343C>T
  hgvsp: ENSP00000393964.2:p.Arg115Cys
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.233C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*33C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg115Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-109707190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707190
    reference: chr 1
allele count: 3
allele frequency: 2.47239162683369e-5
allele num: 121340
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.234G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.344G>A
  hgvsp: ENSP00000434595.1:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.344G>A
  hgvsp: ENSP00000435066.1:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.344G>A
  hgvsp: ENSP00000431349.1:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.344G>A
  hgvsp: ENSP00000393964.2:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.344G>A
  hgvsp: ENSP00000432164.1:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.344G>A
  hgvsp: ENSP00000358955.3:p.Arg115His
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.479G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*34G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg115His
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-109707200-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707200
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707200
    reference: chr 1
allele count: 8
allele frequency: 6.592175088170342e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.354C>T
  hgvsp: ENST00000369939.3:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.354C>T
  hgvsp: ENST00000531664.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.354C>T
  hgvsp: ENST00000534476.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.489C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.354C>T
  hgvsp: ENST00000457623.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*44C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.354C>T
  hgvsp: ENST00000529753.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.354C>T
  hgvsp: ENST00000526264.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.244C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10431
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu118Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-109707201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707201
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707201
    reference: chr 1
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.355G>A
  hgvsp: ENSP00000435066.1:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.355G>A
  hgvsp: ENSP00000431349.1:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.245G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.355G>A
  hgvsp: ENSP00000393964.2:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*45G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.490G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.355G>A
  hgvsp: ENSP00000358955.3:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.355G>A
  hgvsp: ENSP00000432164.1:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.355G>A
  hgvsp: ENSP00000434595.1:p.Gly119Ser
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly119Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-109707214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707214
    reference: chr 1
allele count: 81
allele frequency: 6.675567423230974e-4
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.258G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.368G>A
  hgvsp: ENSP00000393964.2:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.368G>A
  hgvsp: ENSP00000435066.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.368G>A
  hgvsp: ENSP00000431349.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.368G>A
  hgvsp: ENSP00000434595.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.368G>A
  hgvsp: ENSP00000432164.1:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*58G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.368G>A
  hgvsp: ENSP00000358955.3:p.Arg123Gln
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.503G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27455
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg123Gln
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

1-109707214-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707214
    reference: chr 1
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.368G>C
  hgvsp: ENSP00000393964.2:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.368G>C
  hgvsp: ENSP00000358955.3:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.368G>C
  hgvsp: ENSP00000435066.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.368G>C
  hgvsp: ENSP00000431349.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*58G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.258G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.368G>C
  hgvsp: ENSP00000434595.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.368G>C
  hgvsp: ENSP00000432164.1:p.Arg123Pro
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.503G>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg123Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-109707220-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707220
    reference: chr 1
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.374A>G
  hgvsp: ENSP00000432164.1:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.374A>G
  hgvsp: ENSP00000358955.3:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.374A>G
  hgvsp: ENSP00000435066.1:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.509A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*64A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.374A>G
  hgvsp: ENSP00000393964.2:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.374A>G
  hgvsp: ENSP00000434595.1:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.374A>G
  hgvsp: ENSP00000431349.1:p.Asp125Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.264A>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp125Gly
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

1-109707228-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707228
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.382G>A
  hgvsp: ENSP00000431349.1:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.517G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.382G>A
  hgvsp: ENSP00000432164.1:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.272G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.382G>A
  hgvsp: ENSP00000393964.2:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.382G>A
  hgvsp: ENSP00000434595.1:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*72G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.382G>A
  hgvsp: ENSP00000435066.1:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.382G>A
  hgvsp: ENSP00000358955.3:p.Asp128Asn
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp128Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-109707228-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707228
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707228
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.517G>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.382G>T
  hgvsp: ENSP00000358955.3:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.382G>T
  hgvsp: ENSP00000431349.1:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*72G>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.382G>T
  hgvsp: ENSP00000434595.1:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.382G>T
  hgvsp: ENSP00000393964.2:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.382G>T
  hgvsp: ENSP00000432164.1:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.382G>T
  hgvsp: ENSP00000435066.1:p.Asp128Tyr
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.272G>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp128Tyr
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

1-109707232-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707232
    reference: chr 1
allele count: 3
allele frequency: 2.473451619286327e-5
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.521A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*76A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.386A>T
  hgvsp: ENSP00000434595.1:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.386A>T
  hgvsp: ENSP00000358955.3:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.386A>T
  hgvsp: ENSP00000435066.1:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.386A>T
  hgvsp: ENSP00000393964.2:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.276A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.386A>T
  hgvsp: ENSP00000431349.1:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.386A>T
  hgvsp: ENSP00000432164.1:p.Glu129Val
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11467
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu129Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-109707233-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707233
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707233
    reference: chr 1
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.387G>A
  hgvsp: ENST00000369939.3:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.387G>A
  hgvsp: ENST00000534476.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.387G>A
  hgvsp: ENST00000526264.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.522G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.387G>A
  hgvsp: ENST00000531664.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*77G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.387G>A
  hgvsp: ENST00000457623.2:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.277G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.387G>A
  hgvsp: ENST00000529753.1:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu129Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

1-109707244-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707244
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707244
    reference: chr 1
allele count: 2
allele frequency: 1.649783878311941e-5
allele num: 121228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.398G>C
  hgvsp: ENSP00000434595.1:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.398G>C
  hgvsp: ENSP00000435066.1:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.398G>C
  hgvsp: ENSP00000431349.1:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.533G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.288G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.398G>C
  hgvsp: ENSP00000393964.2:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.398G>C
  hgvsp: ENSP00000358955.3:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*88G>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.398G>C
  hgvsp: ENSP00000432164.1:p.Gly133Ala
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10410
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly133Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-109707245-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707245
    reference: chr 1
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.289C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.399C>G
  hgvsp: ENST00000457623.2:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*89C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.399C>G
  hgvsp: ENST00000529753.1:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000533374
  gene symbol: KIAA1324
  hgvsc: ENST00000533374.1:n.534C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.399C>G
  hgvsp: ENST00000534476.1:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.399C>G
  hgvsp: ENST00000526264.1:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.399C>G
  hgvsp: ENST00000531664.1:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.399C>G
  hgvsp: ENST00000369939.3:c.399C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly133Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

1-109707257-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707257
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707257
    reference: chr 1
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.411C>G
  hgvsp: ENST00000457623.2:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.411C>G
  hgvsp: ENST00000529753.1:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*101C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.411C>G
  hgvsp: ENST00000526264.1:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.411C>G
  hgvsp: ENST00000531664.1:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.411C>G
  hgvsp: ENST00000369939.3:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.411C>G
  hgvsp: ENST00000534476.1:c.411C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.301C>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu137Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-109707259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707259
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707259
    reference: chr 1
allele count: 4
allele frequency: 3.302291790502609e-5
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.413C>T
  hgvsp: ENSP00000393964.2:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.413C>T
  hgvsp: ENSP00000432164.1:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*103C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.303C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.413C>T
  hgvsp: ENSP00000434595.1:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.413C>T
  hgvsp: ENSP00000435066.1:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.413C>T
  hgvsp: ENSP00000431349.1:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.413C>T
  hgvsp: ENSP00000358955.3:p.Ser138Leu
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser138Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-109707262-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707262
    reference: chr 1
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.416C>G
  hgvsp: ENSP00000431349.1:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*106C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.306C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.416C>G
  hgvsp: ENSP00000358955.3:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.416C>G
  hgvsp: ENSP00000434595.1:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.416C>G
  hgvsp: ENSP00000435066.1:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.416C>G
  hgvsp: ENSP00000432164.1:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.416C>G
  hgvsp: ENSP00000393964.2:p.Ala139Gly
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14776
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10405
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38710
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala139Gly
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

1-109707278-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707278
    reference: chr 1
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.432T>A
  hgvsp: ENSP00000435066.1:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.322T>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.432T>A
  hgvsp: ENSP00000432164.1:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.432T>A
  hgvsp: ENSP00000393964.2:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.432T>A
  hgvsp: ENSP00000358955.3:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.432T>A
  hgvsp: ENSP00000434595.1:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*122T>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.432T>A
  hgvsp: ENSP00000431349.1:p.Asp144Glu
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38317
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp144Glu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

1-109707279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707279
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707279
    reference: chr 1
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.433G>A
  hgvsp: ENSP00000393964.2:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.433G>A
  hgvsp: ENSP00000435066.1:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.433G>A
  hgvsp: ENSP00000358955.3:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.323G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.433G>A
  hgvsp: ENSP00000432164.1:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.433G>A
  hgvsp: ENSP00000431349.1:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*123G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.433G>A
  hgvsp: ENSP00000434595.1:p.Asp145Asn
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp145Asn
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

1-109707280-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707280
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707280
    reference: chr 1
allele count: 3
allele frequency: 2.485336514564072e-5
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.434A>T
  hgvsp: ENSP00000393964.2:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*124A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.434A>T
  hgvsp: ENSP00000434595.1:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.434A>T
  hgvsp: ENSP00000432164.1:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.434A>T
  hgvsp: ENSP00000358955.3:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.434A>T
  hgvsp: ENSP00000435066.1:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.324A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.434A>T
  hgvsp: ENSP00000431349.1:p.Asp145Val
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3954
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14743
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp145Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-109707281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707281
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707281
    reference: chr 1
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.325C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.435C>T
  hgvsp: ENST00000531664.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.435C>T
  hgvsp: ENST00000369939.3:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.435C>T
  hgvsp: ENST00000526264.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.435C>T
  hgvsp: ENST00000534476.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*125C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.435C>T
  hgvsp: ENST00000457623.2:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.435C>T
  hgvsp: ENST00000529753.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10329
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp145Asp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

1-109707299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707299
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707299
    reference: chr 1
allele count: 53
allele frequency: 4.431882797605111e-4
allele num: 119588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.453C>T
  hgvsp: ENST00000526264.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.453C>T
  hgvsp: ENST00000531664.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.453C>T
  hgvsp: ENST00000529753.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.453C>T
  hgvsp: ENST00000534476.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.343C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.453C>T
  hgvsp: ENST00000369939.3:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.453C>T
  hgvsp: ENST00000457623.2:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*143C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14630
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26986
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 9.75e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr151Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-109707300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707300
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707300
    reference: chr 1
allele count: 2
allele frequency: 1.673612157118709e-5
allele num: 119502
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.454G>A
  hgvsp: ENSP00000358955.3:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.344G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.454G>A
  hgvsp: ENSP00000434595.1:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.454G>A
  hgvsp: ENSP00000393964.2:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.454G>A
  hgvsp: ENSP00000435066.1:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432164
  ensembl transcript: ENST00000534476
  gene symbol: KIAA1324
  hgvsc: ENST00000534476.1:c.454G>A
  hgvsp: ENSP00000432164.1:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.454G>A
  hgvsp: ENSP00000431349.1:p.Gly152Arg
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*144G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2878
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36818
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly152Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-109707310-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707310
    reference: chr 1
allele count: 1
allele frequency: 8.460380040271409e-6
allele num: 118198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.464C>T
  hgvsp: ENSP00000431349.1:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.464C>T
  hgvsp: ENSP00000393964.2:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.354C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.464C>T
  hgvsp: ENSP00000358955.3:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.464C>T
  hgvsp: ENSP00000435066.1:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.464C>T
  hgvsp: ENSP00000434595.1:p.Thr155Ile
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr155Ile
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-109707313-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707313
    reference: chr 1
allele count: 1
allele frequency: 8.480757161999423e-6
allele num: 117914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467C>G
  hgvsp: ENSP00000434595.1:p.Ser156Trp
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467C>G
  hgvsp: ENSP00000393964.2:p.Ser156Trp
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467C>G
  hgvsp: ENSP00000358955.3:p.Ser156Trp
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467C>G
  hgvsp: ENSP00000431349.1:p.Ser156Trp
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.467C>G
  hgvsp: ENST00000526264.1:c.467C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser156Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-109707313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707313
    reference: chr 1
allele count: 8
allele frequency: 6.784605729599538e-5
allele num: 117914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467C>T
  hgvsp: ENSP00000393964.2:p.Ser156Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000435066
  ensembl transcript: ENST00000526264
  gene symbol: KIAA1324
  hgvsc: ENST00000526264.1:c.467C>T
  hgvsp: ENST00000526264.1:c.467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467C>T
  hgvsp: ENSP00000434595.1:p.Ser156Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467C>T
  hgvsp: ENSP00000358955.3:p.Ser156Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467C>T
  hgvsp: ENSP00000431349.1:p.Ser156Leu
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2799
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser156Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

1-109707314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707314
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707314
    reference: chr 1
allele count: 2
allele frequency: 1.696151432399885e-5
allele num: 117914
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+1G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+1G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+1G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+1G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+1G>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+1G>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9726
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
hgvs: c.467+1G>A
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

1-109707315-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707315
    reference: chr 1
allele count: 1
allele frequency: 8.485650764557135e-6
allele num: 117846
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+2T>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+2T>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+2T>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+2T>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+2T>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+2T>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
hgvs: c.467+2T>G
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

1-109707321-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707321
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707321
    reference: chr 1
allele count: 5
allele frequency: 4.274454152204763e-5
allele num: 116974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+8T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+8T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+8T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+8T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+8T>C
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+8T>C
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7786
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9520
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 32327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2966
  bin: 7.75e1
  variant carriers: 0
hgvs: c.467+8T>C
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

1-109707325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707325
    reference: chr 1
allele count: 1
allele frequency: 8.622473615230737e-6
allele num: 115976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+12C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+12C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+12C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+12C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+12C>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+12C>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8600
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

1-109707326-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707326
    reference: chr 1
allele count: 2
allele frequency: 1.723811001361811e-5
allele num: 116022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+13A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+13A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+13A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+13A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+13A>T
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+13A>T
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23661
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5925
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-109707328-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707328
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707328
    reference: chr 1
allele count: 1
allele frequency: 8.67648845159387e-6
allele num: 115254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+15A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+15A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+15A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+15A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+15A>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+15A>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7944
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-109707329-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707329
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707329
    reference: chr 1
allele count: 2
allele frequency: 1.734876216581947e-5
allele num: 115282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+16C>A
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+16C>A
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2632
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6548
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

1-109707332-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 109707332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 109707332
    reference: chr 1
allele count: 1
allele frequency: 8.744316194473592e-6
allele num: 114360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000393964
  ensembl transcript: ENST00000457623
  gene symbol: KIAA1324
  hgvsc: ENST00000457623.2:c.467+19C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000434595
  ensembl transcript: ENST00000529753
  gene symbol: KIAA1324
  hgvsc: ENST00000529753.1:c.467+19C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000358955
  ensembl transcript: ENST00000369939
  gene symbol: KIAA1324
  hgvsc: ENST00000369939.3:c.467+19C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl transcript: ENST00000490758
  gene symbol: KIAA1324
  hgvsc: ENST00000490758.2:n.357+19C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000432023
  ensembl transcript: ENST00000527996
  gene symbol: KIAA1324
  hgvsc: ENST00000527996.1:c.*157+19C>G
  variant of: http://identifiers.org/hgnc/29618
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116299
  ensembl protein: ENSP00000431349
  ensembl transcript: ENST00000531664
  gene symbol: KIAA1324
  hgvsc: ENST00000531664.1:c.467+19C>G
  variant of: http://identifiers.org/hgnc/29618
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10595
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6814
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

GenotypeQuality
all individuals: 3415
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4567
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8177
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22224
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555161581288296e-5
allele num: 64302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.958e0

QD
type: SiteQuality
SIO_000300: 4.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.717008e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.864e0

MQRankSum
type: SiteQuality
SIO_000300: -4.14e-1

GenotypeQuality
all individuals: 3321
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1875
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3856
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5483
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 264
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63836
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.393044367727913e-5
allele num: 15642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.659893e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.883e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

VQSLOD
type: SiteQuality
SIO_000300: -8.469e-1

GenotypeQuality
all individuals: 4266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3041
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3995
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5481
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63756
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.036699149906697e-4
allele num: 9646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.146e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.702e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.652168e6

VQSLOD
type: SiteQuality
SIO_000300: -2.956e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 2.757e1

GenotypeQuality
all individuals: 1720
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2652
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4023
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6982
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4186
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571091908876669e-5
allele num: 63650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.487e0

VQSLOD
type: SiteQuality
SIO_000300: -1.58e0

QD
type: SiteQuality
SIO_000300: 1.065e1

MQRankSum
type: SiteQuality
SIO_000300: 2.49e0

DP
type: SiteQuality
SIO_000300: 1.633829e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2719
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6921
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5467
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 357
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572475390760135e-5
allele num: 63594
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.167e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.567e0

FS
type: SiteQuality
SIO_000300: 3.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

QD
type: SiteQuality
SIO_000300: 1.248e1

VQSLOD
type: SiteQuality
SIO_000300: -2.683e-1

DP
type: SiteQuality
SIO_000300: 1.622894e6

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3789
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5466
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1422
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1860
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.53851183470642e-5
allele num: 15294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.111e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.692e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 1.588562e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 2038
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2774
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11568
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3762
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4044
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.503e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.881e0

VQSLOD
type: SiteQuality
SIO_000300: -4.938e0

QD
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.576589e6

GenotypeQuality
all individuals: 3810
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2262
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3876
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4399
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5447
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.076658053402239e-4
allele num: 9288
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.748e0

MQ
type: SiteQuality
SIO_000300: 6.051e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.554e0

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

DP
type: SiteQuality
SIO_000300: 1.574229e6

QD
type: SiteQuality
SIO_000300: 2.364e1

GenotypeQuality
all individuals: 507
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5451
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 932
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.072271070126528e-4
allele num: 9326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

DP
type: SiteQuality
SIO_000300: 1.575367e6

QD
type: SiteQuality
SIO_000300: 5.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.598e0

FS
type: SiteQuality
SIO_000300: 4.854e0

VQSLOD
type: SiteQuality
SIO_000300: -1.073e0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32951
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9979
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2236
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554436361375365e-5
allele num: 64332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.676097e6

QD
type: SiteQuality
SIO_000300: 1.531e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.089e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.74e-1

FS
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

GenotypeQuality
all individuals: 213
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9974
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33010
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.753e0

DP
type: SiteQuality
SIO_000300: 1.676165e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.685e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.278e1

MQRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.148e0

GenotypeQuality
all individuals: 265
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 773
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2897
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551397809426293e-5
allele num: 64458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.1e-2

DP
type: SiteQuality
SIO_000300: 1.685299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
all individuals: 777
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3030
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33578
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.102795618852586e-5
allele num: 64458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.556e0

DP
type: SiteQuality
SIO_000300: 1.686042e6

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 1.256e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.511e0

GenotypeQuality
all individuals: 472
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2899
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -8.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.84e-1

FS
type: SiteQuality
SIO_000300: 1.4735e1

VQSLOD
type: SiteQuality
SIO_000300: -5.946e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.686725e6

QD
type: SiteQuality
SIO_000300: 8.93e0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33625
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3217
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 9.75e1
variant carriers: 136

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 132
allele frequency: 1.289818252882548e-2
allele num: 10234
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10630
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.348582362149939e-4
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.463e1

DP
type: SiteQuality
SIO_000300: 1.691351e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10034
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.75609756097561e-5
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11034
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

FS
type: SiteQuality
SIO_000300: 5.51e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

DP
type: SiteQuality
SIO_000300: 1.686569e6

QD
type: SiteQuality
SIO_000300: 1.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

GenotypeQuality
all individuals: 151
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10031
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.75609756097561e-5
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.95e-1

FS
type: SiteQuality
SIO_000300: 5.098e0

DP
type: SiteQuality
SIO_000300: 1.687317e6

VQSLOD
type: SiteQuality
SIO_000300: -1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

QD
type: SiteQuality
SIO_000300: 1.285e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.049e0

GenotypeQuality
all individuals: 423
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33984
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.282e1

FS
type: SiteQuality
SIO_000300: 1.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.76e0

DP
type: SiteQuality
SIO_000300: 1.687881e6

MQRankSum
type: SiteQuality
SIO_000300: 7.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.63e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

GenotypeQuality
all individuals: 230
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 458
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34085
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.714e0

QD
type: SiteQuality
SIO_000300: 1.14e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.234e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: 4.36e-1

DP
type: SiteQuality
SIO_000300: 1.690049e6

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2910
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.60235947258848e-4
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.979624323463865e-4
allele num: 12564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65080
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.795085767269356e-4
allele num: 8628
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.914e0

DP
type: SiteQuality
SIO_000300: 1.708169e6

GenotypeQuality
all individuals: 34896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2910
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536570374923171e-5
allele num: 65080
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.914e0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

DP
type: SiteQuality
SIO_000300: 1.708169e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 5.71e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

GenotypeQuality
all individuals: 390
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10122
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2914
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12810
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.70914e6

QD
type: SiteQuality
SIO_000300: 1.242e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2922
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65594
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.315e0

DP
type: SiteQuality
SIO_000300: 1.724626e6

FS
type: SiteQuality
SIO_000300: 4.956e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 9.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2110
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36436
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.658103148541626e-5
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.081245439065921e-5
allele num: 65776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.196e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.731013e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

FS
type: SiteQuality
SIO_000300: 1.102e0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2937
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36895
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10251
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.025111381125962e-4
allele num: 14814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: -1.209e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

DP
type: SiteQuality
SIO_000300: 1.736417e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.632e1

FS
type: SiteQuality
SIO_000300: 2.918e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.46e-1

MQ
type: SiteQuality
SIO_000300: 5.688e1

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.739635e6

FS
type: SiteQuality
SIO_000300: 5.226e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515381118351265e-5
allele num: 65990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.23e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

FS
type: SiteQuality
SIO_000300: 5.226e0

DP
type: SiteQuality
SIO_000300: 1.739635e6

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.21e-1

GenotypeQuality
all individuals: 37307
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1701
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.569438969911969e-5
allele num: 15222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513134003147319e-5
allele num: 66088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.742978e6

FS
type: SiteQuality
SIO_000300: 2.454e0

QD
type: SiteQuality
SIO_000300: 1.309e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2957
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37514
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3257
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.886e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

DP
type: SiteQuality
SIO_000300: 1.745905e6

MQRankSum
type: SiteQuality
SIO_000300: 9.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e-2

QD
type: SiteQuality
SIO_000300: 1.242e1

GenotypeQuality
all individuals: 87
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2961
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10349
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2672348959639e-5
allele num: 15956
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.15e0

VQSLOD
type: SiteQuality
SIO_000300: -2.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.58e-2

DP
type: SiteQuality
SIO_000300: 1.754038e6

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 72
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2966
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3263
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.198090987975704e-5
allele num: 16134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.757051e6

QD
type: SiteQuality
SIO_000300: 1.087e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.441e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-1

FS
type: SiteQuality
SIO_000300: 2.116e0

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

FS
type: SiteQuality
SIO_000300: 3.822e0

QD
type: SiteQuality
SIO_000300: 9.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.614e0

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-1

DP
type: SiteQuality
SIO_000300: 1.760612e6

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeQuality
all individuals: 2098
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.311604253351826e-3
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16322
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.86e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 1.124e0

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.042e0

DP
type: SiteQuality
SIO_000300: 1.763089e6

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38696
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.028e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.762489e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

QD
type: SiteQuality
SIO_000300: 1.399e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38702
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e0

VQSLOD
type: SiteQuality
SIO_000300: -5.531e-1

QD
type: SiteQuality
SIO_000300: 1.043e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.745e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.76251e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.706e0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.468208092485549e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

DP
type: SiteQuality
SIO_000300: 1.763126e6

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38758
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.499e0

DP
type: SiteQuality
SIO_000300: 1.763127e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.816e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
all individuals: 38786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.004e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 1.763155e6

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.02e0

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10434
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.065e0

FS
type: SiteQuality
SIO_000300: 6.051e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.605e0

QD
type: SiteQuality
SIO_000300: 1.256e1

VQSLOD
type: SiteQuality
SIO_000300: -1.148e0

DP
type: SiteQuality
SIO_000300: 1.763377e6

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 7
allele frequency: 6.729475100942127e-4
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.86e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.18e-2

QD
type: SiteQuality
SIO_000300: 1.46e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

DP
type: SiteQuality
SIO_000300: 1.763591e6

MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 2062
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.73e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

DP
type: SiteQuality
SIO_000300: 1.762921e6

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

FS
type: SiteQuality
SIO_000300: 2.119e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 81

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10427
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 78
allele frequency: 1.169520496596396e-3
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.765598e6

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.481e1

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.765598e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.481e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10443
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

FS
type: SiteQuality
SIO_000300: 1.827e0

DP
type: SiteQuality
SIO_000300: 1.758497e6

QD
type: SiteQuality
SIO_000300: 1.607e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.109999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.82e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

DP
type: SiteQuality
SIO_000300: 1.758262e6

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1991
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.758262e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.78e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10436
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500045000450004e-5
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 2.534e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.361e1

DP
type: SiteQuality
SIO_000300: 1.758103e6

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10422
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38720
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.757973e6

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.473e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

FS
type: SiteQuality
SIO_000300: 1.5703e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.555e0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.526e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.44e-1

FS
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

DP
type: SiteQuality
SIO_000300: 1.756877e6

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.403e1

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

FS
type: SiteQuality
SIO_000300: 3.286e0

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

DP
type: SiteQuality
SIO_000300: 1.756761e6

GenotypeQuality
all individuals: 778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38765
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10409
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.905e1

FS
type: SiteQuality
SIO_000300: 1.5161e1

QD
type: SiteQuality
SIO_000300: 8.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.747e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

DP
type: SiteQuality
SIO_000300: 1.754365e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.621e0

GenotypeQuality
all individuals: 10410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38732
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.05143721633888e-4
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.042e0

QD
type: SiteQuality
SIO_000300: 1.262e1

FS
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

DP
type: SiteQuality
SIO_000300: 1.75423e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.04e-1

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.069434328720563e-5
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.86e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.119e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.519e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.753432e6

GenotypeQuality
all individuals: 1687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10357
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.708737864077671e-5
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.108e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.95e-1

FS
type: SiteQuality
SIO_000300: 4.779e0

DP
type: SiteQuality
SIO_000300: 1.747438e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506432466632521e-5
allele num: 66382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

QD
type: SiteQuality
SIO_000300: 1.126e1

FS
type: SiteQuality
SIO_000300: 1.0023e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.07e-1

DP
type: SiteQuality
SIO_000300: 1.74745e6

VQSLOD
type: SiteQuality
SIO_000300: -8.107e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2943
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38284
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520523175215478e-5
allele num: 66364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

DP
type: SiteQuality
SIO_000300: 1.746815e6

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.9e-1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2934
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38215
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66338
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

FS
type: SiteQuality
SIO_000300: 1.111e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.746159e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.268e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2884
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36828
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.066120715802245e-5
allele num: 65940
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 47
allele frequency: 5.463845617298303e-3
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.956181533646322e-4
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

QD
type: SiteQuality
SIO_000300: 1.171e1

FS
type: SiteQuality
SIO_000300: 6.1e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

DP
type: SiteQuality
SIO_000300: 1.725448e6

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1849
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.034809262237868e-5
allele num: 65902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.399e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.364e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.106e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.22e-1

DP
type: SiteQuality
SIO_000300: 1.721938e6

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9801
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3065
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 750
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15116
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.871e0

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

QD
type: SiteQuality
SIO_000300: 9.77e0

FS
type: SiteQuality
SIO_000300: 1.511e0

MQ
type: SiteQuality
SIO_000300: 5.777e1

VQSLOD
type: SiteQuality
SIO_000300: -2.137e0

DP
type: SiteQuality
SIO_000300: 1.686162e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.97e-1

GenotypeQuality
all individuals: 303
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2799
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530362389813908e-5
allele num: 65344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.679093e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

FS
type: SiteQuality
SIO_000300: 2.528e0

QD
type: SiteQuality
SIO_000300: 1.193e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

GenotypeQuality
all individuals: 33975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.65181194906954e-5
allele num: 65344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.957996450404259e-4
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.528e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.679093e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.193e1

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 750
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.865824782951855e-5
allele num: 10136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530268715186387e-5
allele num: 65348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

FS
type: SiteQuality
SIO_000300: 3.353e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.677676e6

QD
type: SiteQuality
SIO_000300: 1.389e1

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.687174000267486e-5
allele num: 14954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.502e0

DP
type: SiteQuality
SIO_000300: 1.67393e6

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.09e-1

QD
type: SiteQuality
SIO_000300: 1.451e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeQuality
all individuals: 1220
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.699177727818669e-5
allele num: 64942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.641812e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.842e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 515
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.017543859649122e-5
allele num: 14250
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e0

VQSLOD
type: SiteQuality
SIO_000300: -6.954e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.165e0

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.593635e6

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 513
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.002803925495694e-4
allele num: 9986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

FS
type: SiteQuality
SIO_000300: 1.465e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

DP
type: SiteQuality
SIO_000300: 1.592495e6

MQRankSum
type: SiteQuality
SIO_000300: -1.006e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.274e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

GenotypeQuality
all individuals: 402
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28390
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6404
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55865207768322e-5
allele num: 64158
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

DP
type: SiteQuality
SIO_000300: 1.559008e6

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

FS
type: SiteQuality
SIO_000300: 3.232e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.003e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 1789
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14014
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.116138481194104e-5
allele num: 64182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.314e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

DP
type: SiteQuality
SIO_000300: 1.556562e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

GenotypeQuality
all individuals: 533
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7298
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1822
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.273785277858598e-5
allele num: 13748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.441000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.85e0

DP
type: SiteQuality
SIO_000300: 1.501256e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1