4-95498579-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498579
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498579
    reference: chr 4
allele count: 1
allele frequency: 7.069136151562279e-5
allele num: 14146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+5A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2093A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+203A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4035A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1394A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1394A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.341+5A>G
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

4-95498583-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498583
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498583
    reference: chr 4
allele count: 5
allele frequency: 3.536067892503536e-4
allele num: 14140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2089G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4039G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+9G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1398G>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+207G>C
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

4-95498586-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498586
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498586
    reference: chr 4
allele count: 1
allele frequency: 7.074136955291455e-5
allele num: 14136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+210C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+12C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1401C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4042C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2086C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1401C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

4-95498596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498596
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498596
    reference: chr 4
allele count: 1
allele frequency: 7.104290991759022e-5
allele num: 14076
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4052T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2076T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+220T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+22T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1411T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1411T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

4-95498617-G-GAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498617
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498619
    reference: chr 4
allele count: 291
allele frequency: 3.220451527224436e-2
allele num: 9036
alternate allele: GAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1449_383+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1449_383+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4090_195+4091dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1449_513+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1449_383+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1449_286+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1449_180+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1449_710+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+60_341+61dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2038_292-2037dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1449_383+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+258_401+259dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1449_383+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1449_344+1450dupAT
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 1.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

4-95498617-GAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498617
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498615
    reference: chr 4
allele count: 4359
allele frequency: 4.824037184594954e-1
allele num: 9036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1449_286+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1449_710+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+258_401+259delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1449_383+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1449_383+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1449_513+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4090_195+4091delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1449_383+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1449_344+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1449_383+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2038_292-2037delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+60_341+61delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1449_180+1450delAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1449_383+1450delAT
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 619
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 1580
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 661
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 536
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: GAT
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

4-95498617-GATAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95498617
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95498613
    reference: chr 4
allele count: 131
allele frequency: 1.449756529437804e-2
allele num: 9036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+1447_286+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+1447_710+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+1447_344+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.180+1447_180+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+1447_383+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-2040_292-2037delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+1447_383+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.513+1447_513+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+58_341+61delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+1447_383+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+256_401+259delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+1447_383+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+4088_195+4091delATAT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+1447_383+1450delATAT
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 2.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: GATAT
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

4-95500622-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500622
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500622
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 32672
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2246A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2048A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-50A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+6078A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-50A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3437A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3076A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+102A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3437A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27130
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

4-95500623-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500623
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500623
    reference: chr 4
allele count: 1
allele frequency: 2.899727425621991e-5
allele num: 34486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+103A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2247A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-49A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-49A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2049A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3075A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3438A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+6079A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3438A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-95500628-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500628
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500628
    reference: chr 4
allele count: 8667
allele frequency: 2.051458057186139e-1
allele num: 42248
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2054A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-44A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-44A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3070A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.195+6084A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2252A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3443A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+108A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 2.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 1.25e1
  variant carriers: 4355
genotype depth: GenotypeDepth
  all individuals: 26747
  bin: 7.5e0
  variant carriers: 6606
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.25e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 10256
  bin: 2.5e0
  variant carriers: 739
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 77
genotype quality: GenotypeQuality
num of homozygotes: 909
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

4-95500632-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500632
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500632
    reference: chr 4
allele count: 2
allele frequency: 4.699027301348621e-5
allele num: 42562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6084G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3066G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2058G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2256G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-40G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3447G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-40G>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+112G>T
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27096
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

4-95500652-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500652
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500652
    reference: chr 4
allele count: 1
allele frequency: 2.160387141375735e-5
allele num: 46288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+132A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-20A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2078A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-20A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3046A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6064A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3467A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2276A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3467A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

4-95500657-C-CTTTTGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500657
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500664
    reference: chr 4
allele count: 1
allele frequency: 2.101281781886951e-5
allele num: 47590
alternate allele: CTTTTGTG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-11_181-10insGTGTTTT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-11_292-10insGTGTTTT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

4-95500657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500657
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500657
    reference: chr 4
allele count: 1
allele frequency: 2.101281781886951e-5
allele num: 47590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3041C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+137C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-15C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-15C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2281C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3472C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2083C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6059C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3472C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

4-95500667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500667
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500667
    reference: chr 4
allele count: 3
allele frequency: 5.636554937622125e-5
allele num: 53224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.292-5T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2093T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+147T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3031T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6049T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.181-5T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3482T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2291T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.181-5T>C
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

4-95500678-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500678
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500678
    reference: chr 4
allele count: 1
allele frequency: 1.698254194687861e-5
allele num: 58884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.187C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+158C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.298C>G
  hgvsp: ENSP00000322021.5:p.Gln100Glu
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2302C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2104C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3493C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6038C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3020C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln100Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ

4-95500686-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500686
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500686
    reference: chr 4
allele count: 1
allele frequency: 1.604363869725654e-5
allele num: 62330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+166A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.195A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2112A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.306A>G
  hgvsp: ENST00000318007.5:c.306A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2310A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6030A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-3012A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3501A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3501A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.195A>G
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

4-95500711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500711
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500711
    reference: chr 4
allele count: 17
allele frequency: 2.584057882896577e-4
allele num: 65788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2137A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.197+23A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-2987A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+191A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2335A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.308+23A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-6005A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3526A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3526A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10645
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

4-95500719-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500719
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500719
    reference: chr 4
allele count: 1
allele frequency: 1.516070345664039e-5
allele num: 65960
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-5997T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.308+31T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.197+31T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+199T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2343T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-2979T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3534T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2145T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3534T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

4-95500723-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500723
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500723
    reference: chr 4
allele count: 1
allele frequency: 1.516392199678525e-5
allele num: 65946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.197+35G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2347G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2149G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.308+35G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+203G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-5993G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3538G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-2975G>A
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11853
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

4-95500737-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95500737
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95500736
    reference: chr 4
allele count: 2
allele frequency: 3.09319805747162e-5
allele num: 64658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.149+220delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.514-2958delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.383+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.383+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.308+52delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.383+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.401+2364delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.344+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.341+2166delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.197+52delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.286+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.383+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-5976delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.383+3555delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.710+3555delA
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23488
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12274
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: TA
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

4-95503821-TCTCTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503821
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503816
    reference: chr 4
allele count: 1
allele frequency: 9.861154938466394e-6
allele num: 101408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2889_287-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2310_384-2306delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2889_342-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2310_384-2306delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2889_711-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2889_402-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2310_384-2306delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2889_150-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2889_384-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2310_384-2306delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.643_647delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-41_198-37delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-41_309-37delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2889_196-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2889_345-2885delCTCTA
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11214
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15493
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: TCTCTA
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

4-95503824-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503824
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503824
    reference: chr 4
allele count: 1
allele frequency: 9.876738305941847e-6
allele num: 101248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2313C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-44C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2313C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2313C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2313C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.640C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-44C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2892C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2892C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

4-95503827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503827
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503827
    reference: chr 4
allele count: 1
allele frequency: 9.86076598430166e-6
allele num: 101412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.643C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2310C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-41C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2310C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-41C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2310C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2889C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2310C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

4-95503829-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503829
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503829
    reference: chr 4
allele count: 1
allele frequency: 9.847947687701884e-6
allele num: 101544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-39C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.645C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2308C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2308C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-39C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2887C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2308C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2308C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2887C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7962
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

4-95503829-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503829
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503829
    reference: chr 4
allele count: 2
allele frequency: 1.969589537540377e-5
allele num: 101544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-39C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-39C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2308C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2308C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2308C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2308C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.645C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2887C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2887C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7962
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

4-95503834-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503834
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503834
    reference: chr 4
allele count: 9
allele frequency: 8.878716729475367e-5
allele num: 101366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-34G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2303G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-34G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2303G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.650G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2303G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2882G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2303G>A
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

4-95503836-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503836
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503836
    reference: chr 4
allele count: 2
allele frequency: 1.957905041605482e-5
allele num: 102150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2301A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2301A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-32A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.652A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-32A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2301A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2880A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2301A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

4-95503838-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503838
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503839
    reference: chr 4
allele count: 3
allele frequency: 2.968827313211281e-5
allele num: 101050
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-23dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.661dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2292dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2292dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2292dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-23dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2871dupT
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2292dupT
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15051
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ

4-95503839-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503839
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503839
    reference: chr 4
allele count: 1
allele frequency: 9.869719699960521e-6
allele num: 101320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.655T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2298T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2298T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-29T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2298T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-29T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2877T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2298T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

4-95503839-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503839
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503839
    reference: chr 4
allele count: 1
allele frequency: 9.869719699960521e-6
allele num: 101320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2298T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2298T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-29T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-29T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.655T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2298T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2298T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2877T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2877T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15236
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

4-95503841-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503841
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503841
    reference: chr 4
allele count: 1
allele frequency: 9.726491071081197e-6
allele num: 102812
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-27T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2296T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-27T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2296T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.657T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2296T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2875T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2296T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

4-95503844-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503844
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503844
    reference: chr 4
allele count: 4
allele frequency: 3.886589323539128e-5
allele num: 102918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-24T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.660T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2293T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2293T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-24T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2872T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2293T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2293T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12085
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16962
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

4-95503846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503846
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503846
    reference: chr 4
allele count: 1
allele frequency: 9.716095684110296e-6
allele num: 102922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-22G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-22G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2291G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2291G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2291G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.662G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2870G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2291G>A
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

4-95503847-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503847
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503847
    reference: chr 4
allele count: 1
allele frequency: 9.689171382063406e-6
allele num: 103208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2290T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.663T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-21T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2290T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-21T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2290T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2869T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2290T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2869T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

4-95503856-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503856
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503856
    reference: chr 4
allele count: 1
allele frequency: 9.610394602802392e-6
allele num: 104054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198-12T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2281T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2281T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2281T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.672T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309-12T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2860T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2281T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

4-95503868-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503868
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503868
    reference: chr 4
allele count: 1
allele frequency: 9.49415160261279e-6
allele num: 105328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2269T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.684T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.198T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2269T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2269T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.309T>C
  hgvsp: ENST00000318007.5:c.309T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2269T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2848T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2848T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.198T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

4-95503872-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503872
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503872
    reference: chr 4
allele count: 1
allele frequency: 9.475619231716793e-6
allele num: 105534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.202C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2265C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2265C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.688C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2265C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.313C>T
  hgvsp: ENSP00000322021.5:p.Pro105Ser
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2844C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2265C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2844C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro105Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-95503873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503873
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503873
    reference: chr 4
allele count: 6
allele frequency: 5.684402000909504e-5
allele num: 105552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2264C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.314C>T
  hgvsp: ENSP00000322021.5:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2264C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.689C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2264C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.203C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2264C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2843C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2843C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro105Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

4-95503880-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503880
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503880
    reference: chr 4
allele count: 1
allele frequency: 9.448402275175268e-6
allele num: 105838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2257T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.321T>G
  hgvsp: ENST00000318007.5:c.321T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2257T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.210T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.696T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2257T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2836T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2257T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2836T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.321T>G
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-95503890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503890
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503890
    reference: chr 4
allele count: 69
allele frequency: 6.512751779208276e-4
allele num: 105946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.220C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2247C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.706C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2247C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+8C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2247C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2826C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2247C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18246
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.323+8C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-95503891-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503891
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503891
    reference: chr 4
allele count: 1
allele frequency: 9.433962264150944e-6
allele num: 106000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2246T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2246T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.707T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.221T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2246T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2246T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2825T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2825T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17951
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-95503896-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503896
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503895
    reference: chr 4
allele count: 1
allele frequency: 9.451617171698077e-6
allele num: 105802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+16delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2239delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.228delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2239delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2239delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.714delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2818delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2239delA
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2818delA
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9284
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CA
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

4-95503902-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503902
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503902
    reference: chr 4
allele count: 52277
allele frequency: 4.760937670758806e-1
allele num: 109804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+20T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.718T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2235T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2235T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.232T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2814T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2235T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2235T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9818
  bin: 1.75e1
  variant carriers: 8280
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 2.75e1
  variant carriers: 4782
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 3.75e1
  variant carriers: 1695
genotype depth: GenotypeDepth
  all individuals: 9814
  bin: 1.25e1
  variant carriers: 5479
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 3.25e1
  variant carriers: 2783
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 6.25e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.5e0
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.25e1
  variant carriers: 561
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 7.5e0
  variant carriers: 1409
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 4.25e1
  variant carriers: 1193
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 4.75e1
  variant carriers: 963
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 5.25e1
  variant carriers: 893
genotype quality: GenotypeQuality
num of homozygotes: 12922
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

4-95503913-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503913
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503913
    reference: chr 4
allele count: 16
allele frequency: 1.570567563853388e-4
allele num: 101874
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2224A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2224A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.729A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+31A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.243A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2224A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2224A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2803A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2803A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18617
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8104
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

4-95503918-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503918
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503918
    reference: chr 4
allele count: 1
allele frequency: 9.944114078876713e-6
allele num: 100562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2219C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.734C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2219C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+36C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.248C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2219C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2219C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2798C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2798C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

4-95503919-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503919
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503919
    reference: chr 4
allele count: 1
allele frequency: 1.004702005385203e-5
allele num: 99532
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.735T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2218T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2218T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.249T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+37T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2218T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2797T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2218T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

4-95503924-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503924
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503924
    reference: chr 4
allele count: 1
allele frequency: 1.01667344448963e-5
allele num: 98360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.254A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2213A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+42A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2213A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.740A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2213A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2792A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2213A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

4-95503927-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503927
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503927
    reference: chr 4
allele count: 1
allele frequency: 1.037495071898408e-5
allele num: 96386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.743T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+45T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2210T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2210T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2210T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.257T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2789T>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2210T>A
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17125
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

4-95503929-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95503929
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95503929
    reference: chr 4
allele count: 3
allele frequency: 3.168701677299421e-5
allele num: 94676
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.323+47T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-2208T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-2208T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000508531
  gene symbol: PDLIM5
  hgvsc: ENST00000508531.1:n.259T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-2208T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000514830
  gene symbol: PDLIM5
  hgvsc: ENST00000514830.1:n.745T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-2208T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-2787T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-2787T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11249
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10605
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

4-95506103-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506103
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506103
    reference: chr 4
allele count: 1
allele frequency: 9.810076911002982e-6
allele num: 101936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.324-34C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.552C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-34C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-34C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-34C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-34C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-613C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-613C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

4-95506114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506114
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506114
    reference: chr 4
allele count: 3
allele frequency: 2.927171961595504e-5
allele num: 102488
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.324-23T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.384-23T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.563T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.384-23T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.384-23T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-602T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.384-23T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-602T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23286
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

4-95506146-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506146
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506146
    reference: chr 4
allele count: 1
allele frequency: 9.984025559105432e-6
allele num: 100160
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.393A>T
  hgvsp: ENST00000380180.3:c.393A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.595A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.393A>T
  hgvsp: ENST00000514743.1:c.393A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.393A>T
  hgvsp: ENST00000508216.1:c.393A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.333A>T
  hgvsp: ENST00000318007.5:c.333A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.393A>T
  hgvsp: ENST00000503974.1:c.393A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-570A>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-570A>T
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8726
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro131Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

4-95506147-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506147
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506147
    reference: chr 4
allele count: 1
allele frequency: 1.000340115639317e-5
allele num: 99966
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.394C>G
  hgvsp: ENSP00000426804.1:p.Pro132Ala
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.394C>G
  hgvsp: ENSP00000424297.1:p.Pro132Ala
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.334C>G
  hgvsp: ENSP00000322021.5:p.Pro112Ala
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.596C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.394C>G
  hgvsp: ENSP00000424360.1:p.Pro132Ala
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.394C>G
  hgvsp: ENSP00000369527.3:p.Pro132Ala
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-569C>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-569C>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21427
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro132Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

4-95506151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506151
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506151
    reference: chr 4
allele count: 1
allele frequency: 1.00965227575623e-5
allele num: 99044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.398A>G
  hgvsp: ENSP00000426804.1:p.Lys133Arg
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.398A>G
  hgvsp: ENSP00000369527.3:p.Lys133Arg
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.338A>G
  hgvsp: ENSP00000322021.5:p.Lys113Arg
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.600A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.398A>G
  hgvsp: ENSP00000424360.1:p.Lys133Arg
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-565A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.398A>G
  hgvsp: ENSP00000424297.1:p.Lys133Arg
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys133Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

4-95506153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506153
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506153
    reference: chr 4
allele count: 2
allele frequency: 2.034339653348523e-5
allele num: 98312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.340C>T
  hgvsp: ENSP00000322021.5:p.Arg114Cys
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.602C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.400C>T
  hgvsp: ENSP00000424297.1:p.Arg134Cys
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.400C>T
  hgvsp: ENSP00000369527.3:p.Arg134Cys
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.400C>T
  hgvsp: ENSP00000426804.1:p.Arg134Cys
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.400C>T
  hgvsp: ENSP00000424360.1:p.Arg134Cys
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-563C>T
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-563C>T
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10627
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg134Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

4-95506154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506154
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506154
    reference: chr 4
allele count: 1
allele frequency: 1.022035076243817e-5
allele num: 97844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401G>A
  hgvsp: ENSP00000426804.1:p.Arg134His
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401G>A
  hgvsp: ENSP00000369527.3:p.Arg134His
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401G>A
  hgvsp: ENSP00000424360.1:p.Arg134His
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401G>A
  hgvsp: ENSP00000424297.1:p.Arg134His
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-562G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341G>A
  hgvsp: ENSP00000322021.5:p.Arg114His
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-562G>A
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg134His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

4-95506163-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506163
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506163
    reference: chr 4
allele count: 1
allele frequency: 1.054496372532478e-5
allele num: 94832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+9T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-553T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-553T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

4-95506179-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506179
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506179
    reference: chr 4
allele count: 8
allele frequency: 9.114523993984414e-5
allele num: 87772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+25T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-537T>C
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-537T>C
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2503
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4267
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

4-95506182-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506182
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506182
    reference: chr 4
allele count: 1
allele frequency: 1.160604442793807e-5
allele num: 86162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+28T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+28T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+28T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+28T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+28T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-534T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+28T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21687
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

4-95506184-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506184
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506184
    reference: chr 4
allele count: 1
allele frequency: 1.171124748208179e-5
allele num: 85388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+30G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-532G>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-532G>A
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13798
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP

4-95506194-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506194
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506194
    reference: chr 4
allele count: 1
allele frequency: 1.294263822737627e-5
allele num: 77264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+40A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-522A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-522A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

4-95506199-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506199
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506199
    reference: chr 4
allele count: 1
allele frequency: 1.374797217410432e-5
allele num: 72738
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.401+45A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.341+45A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.401+45A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.603+45A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.401+45A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-517A>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.401+45A>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16763
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/4-95506665-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506665
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506665
    reference: chr 4
allele count: 1
allele frequency: 1.486988847583643e-5
allele num: 67250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.402-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.342-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.402-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.402-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.604-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-51C>A
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.402-51C>A
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9943
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

4-95506666-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 95506666
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 95506666
    reference: chr 4
allele count: 1
allele frequency: 1.479114897645249e-5
allele num: 67608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000422833
  ensembl transcript: ENST00000509357
  gene symbol: PDLIM5
  hgvsc: ENST00000509357.1:c.196-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000429577
  ensembl transcript: ENST00000513341
  gene symbol: PDLIM5
  hgvsc: ENST00000513341.1:c.287-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000398469
  ensembl transcript: ENST00000437932
  gene symbol: PDLIM5
  hgvsc: ENST00000437932.1:c.384-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000380176
  gene symbol: PDLIM5
  hgvsc: ENST00000380176.3:n.604-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424360
  ensembl transcript: ENST00000514743
  gene symbol: PDLIM5
  hgvsc: ENST00000514743.1:c.402-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000439795
  ensembl transcript: ENST00000538141
  gene symbol: PDLIM5
  hgvsc: ENST00000538141.1:c.342-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000322021
  ensembl transcript: ENST00000318007
  gene symbol: PDLIM5
  hgvsc: ENST00000318007.5:c.342-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl transcript: ENST00000511586
  gene symbol: PDLIM5
  hgvsc: ENST00000511586.1:n.150-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000426804
  ensembl transcript: ENST00000508216
  gene symbol: PDLIM5
  hgvsc: ENST00000508216.1:c.402-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000369527
  ensembl transcript: ENST00000380180
  gene symbol: PDLIM5
  hgvsc: ENST00000380180.3:c.402-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000424297
  ensembl transcript: ENST00000503974
  gene symbol: PDLIM5
  hgvsc: ENST00000503974.1:c.402-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000321746
  ensembl transcript: ENST00000317968
  gene symbol: PDLIM5
  hgvsc: ENST00000317968.4:c.711-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000442187
  ensembl transcript: ENST00000542407
  gene symbol: PDLIM5
  hgvsc: ENST00000542407.1:c.345-50T>G
  variant of: http://identifiers.org/hgnc/17468
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163110
  ensembl protein: ENSP00000401579
  ensembl transcript: ENST00000450793
  gene symbol: PDLIM5
  hgvsc: ENST00000450793.1:c.402-50T>G
  variant of: http://identifiers.org/hgnc/17468
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17208
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.805054151624549e-3
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 3.58e0

QD
type: SiteQuality
SIO_000300: 1.584e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.98e-2

MQ
type: SiteQuality
SIO_000300: 5.815e1

VQSLOD
type: SiteQuality
SIO_000300: -1.541e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

DP
type: SiteQuality
SIO_000300: 2.18604e5

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1150
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5302
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 9.025270758122744e-3
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.316e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.35e-1

MQ
type: SiteQuality
SIO_000300: 5.893e1

DP
type: SiteQuality
SIO_000300: 2.17142e5

QD
type: SiteQuality
SIO_000300: 1.119e1

GenotypeDepth
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2122
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1960
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 711
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 421
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5252
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.315097317201473e-4
allele num: 7604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.329e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

DP
type: SiteQuality
SIO_000300: 2.1605e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.75e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e0

QD
type: SiteQuality
SIO_000300: 5.19e0

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

MQ
type: SiteQuality
SIO_000300: 5.88e1

GenotypeDepth
all individuals: 1109
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 741
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.824817518248175e-3
allele num: 548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.01e1

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 2.03692e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.327e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.456e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-2

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 15

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 133
bin: 6.75e1
variant carriers: 24

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 18

GenotypeQuality
all individuals: 201
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 22

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1514
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 27

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 9

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 147
bin: 6.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 88

GenotypeQuality
all individuals: 382
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 266
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 12

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 17

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 20

Other
type: Population
allele count: 3
allele frequency: 2.238805970149254e-2
allele num: 134
num of homozygotes: 0

South Asian
type: Population
allele count: 219
allele frequency: 4.693527646806687e-2
allele num: 4666
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 6.25e-2
allele num: 144
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.542372881355932e-2
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 8.726003490401396e-4
allele num: 1146
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.994011976047904e-3
allele num: 334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 55
allele frequency: 2.205292702485966e-2
allele num: 2494
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.921e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

DP
type: SiteQuality
SIO_000300: 1.14072e5

GenotypeDepth
all individuals: 2264
bin: 1.25e1
variant carriers: 1753

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 3.25e1
variant carriers: 36

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 111

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 167

GenotypeQuality
all individuals: 147
bin: 6.25e1
variant carriers: 97

GenotypeQuality
all individuals: 201
bin: 1.75e1
variant carriers: 140

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 130

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 99

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 129

GenotypeQuality
all individuals: 266
bin: 2.25e1
variant carriers: 116

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 99

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 143

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 184

GenotypeQuality
all individuals: 382
bin: 7.5e0
variant carriers: 148

GenotypeQuality
all individuals: 1514
bin: 2.5e0
variant carriers: 104

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 129

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 122

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 109

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 129

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 156

GenotypeQuality
all individuals: 133
bin: 6.75e1
variant carriers: 101

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 2500

South Asian
type: Population
allele count: 2024
allele frequency: 4.337762537505358e-1
allele num: 4666
num of homozygotes: 110

African
type: Population
allele count: 214
allele frequency: 6.407185628742516e-1
allele num: 334
num of homozygotes: 54

European (Non-Finnish)
type: Population
allele count: 1328
allele frequency: 5.324779470729751e-1
allele num: 2494
num of homozygotes: 208

Other
type: Population
allele count: 66
allele frequency: 4.925373134328358e-1
allele num: 134
num of homozygotes: 9

European (Finnish)
type: Population
allele count: 597
allele frequency: 5.209424083769634e-1
allele num: 1146
num of homozygotes: 136

East Asian
type: Population
allele count: 71
allele frequency: 4.930555555555556e-1
allele num: 144
num of homozygotes: 12

Latino
type: Population
allele count: 59
allele frequency: 5.0e-1
allele num: 118
num of homozygotes: 7

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.19e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 1.14072e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

QD
type: SiteQuality
SIO_000300: 1.921e1

GenotypeDepth
all individuals: 2264
bin: 1.25e1
variant carriers: 30

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeDepth
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 157
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 2586
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 147
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1514
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 266
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 201
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 382
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 133
bin: 6.75e1
variant carriers: 14

GenotypeQuality
all individuals: 157
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 210
bin: 4.25e1
variant carriers: 16

European (Finnish)
type: Population
allele count: 2
allele frequency: 1.745200698080279e-3
allele num: 1146
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.462686567164179e-3
allele num: 134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 2.004811547714515e-2
allele num: 2494
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.694915254237288e-2
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 62
allele frequency: 1.328761251607372e-2
allele num: 4666
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 4.861111111111111e-2
allele num: 144
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 2.095808383233533e-2
allele num: 334
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.14072e5

QD
type: SiteQuality
SIO_000300: 1.921e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.19e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

GenotypeDepth
all individuals: 286
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 331
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 417
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variant carriers: 0

GenotypeDepth
all individuals: 1202
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variant carriers: 0

GenotypeDepth
all individuals: 135
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variant carriers: 0

GenotypeDepth
all individuals: 133
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variant carriers: 0

GenotypeDepth
all individuals: 333
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variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
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variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8759
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variant carriers: 0

GenotypeQuality
all individuals: 11542
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variant carriers: 0

GenotypeQuality
all individuals: 3107
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variant carriers: 0

GenotypeQuality
all individuals: 652
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variant carriers: 0

GenotypeQuality
all individuals: 3746
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variant carriers: 0

GenotypeQuality
all individuals: 9879
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variant carriers: 0

GenotypeQuality
all individuals: 3176
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variant carriers: 0

GenotypeQuality
all individuals: 210
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variant carriers: 0

GenotypeQuality
all individuals: 5720
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variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 1

GenotypeQuality
all individuals: 1960
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variant carriers: 0

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 233
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2064
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.84641e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.38e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.09e1

VQSLOD
type: SiteQuality
SIO_000300: -2.677e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 3.165e1

GenotypeDepth
all individuals: 421
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 135
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1201
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 333
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
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GenotypeQuality
all individuals: 3389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8985
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3966
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12496
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variant carriers: 0

GenotypeQuality
all individuals: 5796
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6355
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3175
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variant carriers: 1

GenotypeQuality
all individuals: 138
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GenotypeQuality
all individuals: 9552
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variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18516
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.666666666666667e-4
allele num: 3750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2090
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 268
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.85422e5

QD
type: SiteQuality
SIO_000300: 1.685e1

MQ
type: SiteQuality
SIO_000300: 5.769e1

VQSLOD
type: SiteQuality
SIO_000300: -3.734e-1

FS
type: SiteQuality
SIO_000300: 3.551e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeDepth
all individuals: 3410
bin: 1.75e1
variant carriers: 1273

GenotypeDepth
all individuals: 222
bin: 6.25e1
variant carriers: 121

GenotypeDepth
all individuals: 109
bin: 8.25e1
variant carriers: 57

GenotypeDepth
all individuals: 104
bin: 8.75e1
variant carriers: 47

GenotypeDepth
all individuals: 1231
bin: 9.75e1
variant carriers: 520

GenotypeDepth
all individuals: 251
bin: 5.75e1
variant carriers: 116

GenotypeDepth
all individuals: 280
bin: 4.75e1
variant carriers: 110

GenotypeDepth
all individuals: 96
bin: 9.25e1
variant carriers: 43

GenotypeQuality
all individuals: 1389
bin: 6.25e1
variant carriers: 433

GenotypeQuality
all individuals: 902
bin: 4.75e1
variant carriers: 237

GenotypeQuality
all individuals: 10132
bin: 9.75e1
variant carriers: 8363

GenotypeQuality
all individuals: 591
bin: 8.75e1
variant carriers: 516

GenotypeQuality
all individuals: 2970
bin: 2.75e1
variant carriers: 459

GenotypeQuality
all individuals: 268
bin: 7.25e1
variant carriers: 147

GenotypeQuality
all individuals: 507
bin: 5.75e1
variant carriers: 461

GenotypeQuality
all individuals: 7151
bin: 7.5e0
variant carriers: 264

GenotypeQuality
all individuals: 444
bin: 6.75e1
variant carriers: 216

GenotypeQuality
all individuals: 13430
bin: 2.25e1
variant carriers: 777

GenotypeQuality
all individuals: 3962
bin: 1.25e1
variant carriers: 332

GenotypeQuality
all individuals: 1866
bin: 3.75e1
variant carriers: 194

GenotypeQuality
all individuals: 3289
bin: 3.25e1
variant carriers: 328

GenotypeQuality
all individuals: 4031
bin: 2.5e0
variant carriers: 22

GenotypeQuality
all individuals: 704
bin: 4.25e1
variant carriers: 138

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 670

GenotypeQuality
all individuals: 346
bin: 7.75e1
variant carriers: 169

GenotypeQuality
all individuals: 664
bin: 5.25e1
variant carriers: 410

GenotypeQuality
all individuals: 512
bin: 8.25e1
variant carriers: 367

GenotypeQuality
all individuals: 4768
bin: 1.75e1
variant carriers: 680

African
type: Population
allele count: 1243
allele frequency: 2.977958792525155e-1
allele num: 4174
num of homozygotes: 180

Other
type: Population
allele count: 49
allele frequency: 1.484848484848485e-1
allele num: 330
num of homozygotes: 4

Latino
type: Population
allele count: 498
allele frequency: 1.884935654806964e-1
allele num: 2642
num of homozygotes: 45

European (Finnish)
type: Population
allele count: 438
allele frequency: 1.74780526735834e-1
allele num: 2506
num of homozygotes: 36

East Asian
type: Population
allele count: 291
allele frequency: 1.076980014803849e-1
allele num: 2702
num of homozygotes: 19

European (Non-Finnish)
type: Population
allele count: 5457
allele frequency: 2.420814479638009e-1
allele num: 22542
num of homozygotes: 585

South Asian
type: Population
allele count: 691
allele frequency: 9.398803046789989e-2
allele num: 7352
num of homozygotes: 40

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

DP
type: SiteQuality
SIO_000300: 8.11485e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.848e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.58e-2

GenotypeDepth
all individuals: 215
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 688
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12014
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 3029
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variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 5.25e1
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GenotypeDepth
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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VQSLOD
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FS
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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African
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South Asian
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BaseQRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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African
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VQSLOD
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QD
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MQRankSum
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FS
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MQ
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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FS
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VQSLOD
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MQ
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GenotypeDepth
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

East Asian
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Other
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African
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South Asian
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European (Non-Finnish)
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allele num: 33482
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European (Finnish)
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 5982
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South Asian
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European (Finnish)
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East Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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QD
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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Other
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African
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MQRankSum
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

East Asian
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Latino
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African
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European (Finnish)
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South Asian
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Other
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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Latino
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African
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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South Asian
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DP
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ClippingRankSum
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FS
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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MQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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African
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East Asian
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European (Finnish)
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BaseQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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FS
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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South Asian
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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Latino
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East Asian
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allele frequency: 0.0e0
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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DP
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55568
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 1.103509159126021e-4
allele num: 9062
num of homozygotes: 0

Other
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MQRankSum
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FS
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QD
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.799596890296574e-5
allele num: 55568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.11333778668448e-4
allele num: 8982
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -1.2e-3

ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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MQRankSum
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 9334
num of homozygotes: 0

South Asian
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East Asian
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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allele frequency: 5.31293167569865e-5
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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Latino
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European (Non-Finnish)
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South Asian
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MQRankSum
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DP
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ClippingRankSum
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MQ
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QD
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Other
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Latino
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South Asian
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DP
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 1.050640890943476e-4
allele num: 9518
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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East Asian
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South Asian
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QD
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FS
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.724911167074896e-5
allele num: 57974
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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DP
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.72271223814774e-5
allele num: 58048
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5912
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele count: 0
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num of homozygotes: 0

FS
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SIO_000300: 1.067e0

QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 1.023960679909891e-4
allele num: 9766
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Other
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African
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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MQ
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

South Asian
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African
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Other
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Latino
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 11

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele num: 9854
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East Asian
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African
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allele frequency: 6.873614190687362e-3
allele num: 9020
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European (Finnish)
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Other
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European (Non-Finnish)
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BaseQRankSum
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FS
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MQ
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DP
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7758
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.108647450110865e-4
allele num: 9020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9858
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.963e0

QD
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SIO_000300: 1.018e1

MQ
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SIO_000300: 5.795e1

VQSLOD
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SIO_000300: -1.011e0

FS
type: SiteQuality
SIO_000300: 1.108e1

MQRankSum
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InbreedingCoeff
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SIO_000300: -1.7e-3

DP
type: SiteQuality
SIO_000300: 2.09953e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.442e0

ReadPosRankSum
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SIO_000300: 1.41e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1096
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.718744628923035e-5
allele num: 58182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.167e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.773e0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 2.039e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

DP
type: SiteQuality
SIO_000300: 2.09365e6

GenotypeDepth
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variant carriers: 211

GenotypeDepth
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variant carriers: 285

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 160

GenotypeDepth
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variant carriers: 620

GenotypeDepth
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variant carriers: 868

GenotypeDepth
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GenotypeQuality
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variant carriers: 405

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1087

GenotypeQuality
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variant carriers: 850

GenotypeQuality
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GenotypeQuality
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variant carriers: 316

GenotypeQuality
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variant carriers: 458

GenotypeQuality
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GenotypeQuality
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variant carriers: 29708

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 788

GenotypeQuality
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variant carriers: 1143

GenotypeQuality
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GenotypeQuality
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variant carriers: 906

GenotypeQuality
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variant carriers: 519

GenotypeQuality
all individuals: 1341
bin: 5.25e1
variant carriers: 1133

GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 661

Latino
type: Population
allele count: 6216
allele frequency: 6.002317497103129e-1
allele num: 10356
num of homozygotes: 1794

East Asian
type: Population
allele count: 3927
allele frequency: 4.957081545064378e-1
allele num: 7922
num of homozygotes: 940

European (Finnish)
type: Population
allele count: 3119
allele frequency: 5.131622244159263e-1
allele num: 6078
num of homozygotes: 753

European (Non-Finnish)
type: Population
allele count: 27355
allele frequency: 4.535280854168048e-1
allele num: 60316
num of homozygotes: 5856

African
type: Population
allele count: 967
allele frequency: 1.07111209570226e-1
allele num: 9028
num of homozygotes: 46

Other
type: Population
allele count: 410
allele frequency: 5.0e-1
allele num: 820
num of homozygotes: 100

South Asian
type: Population
allele count: 10283
allele frequency: 6.727950798220361e-1
allele num: 15284
num of homozygotes: 3433

DP
type: SiteQuality
SIO_000300: 2.336284e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.140000000000001e-2

QD
type: SiteQuality
SIO_000300: 2.059e1

GenotypeDepth
all individuals: 136
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 96
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variant carriers: 0

GenotypeDepth
all individuals: 3053
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variant carriers: 0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 1808
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 718
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GenotypeQuality
all individuals: 6720
bin: 9.75e1
variant carriers: 16

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13928
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56048
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.463963963963964e-3
allele num: 8880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.298878381350341e-4
allele num: 9094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.398e0

QD
type: SiteQuality
SIO_000300: 1.412e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

DP
type: SiteQuality
SIO_000300: 1.898573e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

GenotypeDepth
all individuals: 564
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.262164124909223e-5
allele num: 13770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

FS
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 1.87236e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

BaseQRankSum
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SIO_000300: -2.536e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

GenotypeDepth
all individuals: 1327
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 690
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8810
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.311010381634741e-5
allele num: 13678
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 1.858941e6

QD
type: SiteQuality
SIO_000300: 1.364e1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeDepth
all individuals: 94
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variant carriers: 0

GenotypeDepth
all individuals: 990
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
all individuals: 1325
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1713
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GenotypeQuality
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GenotypeQuality
all individuals: 1786
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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Other
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European (Non-Finnish)
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allele num: 54020
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South Asian
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East Asian
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FS
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MQRankSum
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MQ
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VQSLOD
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele num: 52794
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European (Finnish)
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.790835038412539e-5
allele num: 51806
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FS
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QD
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MQ
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VQSLOD
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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East Asian
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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InbreedingCoeff
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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MQ
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QD
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MQRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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East Asian
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VQSLOD
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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Other
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South Asian
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ReadPosRankSum
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MQRankSum
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MQ
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FS
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QD
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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MQ
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QD
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Other
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Latino
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European (Finnish)
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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FS
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DP
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele frequency: 1.893580761219466e-5
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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Latino
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FS
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 7654
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South Asian
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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FS
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BaseQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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Latino
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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FS
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

South Asian
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allele num: 12790
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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ClippingRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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Other
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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DP
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SIO_000300: 1.143899e6

MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Other
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European (Finnish)
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MQ
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QD
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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South Asian
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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Latino
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DP
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MQ
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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