3-9911542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911542
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911542
    reference: chr 3
allele count: 5
allele frequency: 4.222901640174997e-5
allele num: 118402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.584+24G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.554+24G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2562G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.332+24G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2562G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.332+24G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13156
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6845
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

3-9911543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911543
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911543
    reference: chr 3
allele count: 1
allele frequency: 8.434547908232118e-6
allele num: 118560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2563G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.584+23G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2563G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.332+23G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.554+23G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.332+23G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6845
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

3-9911575-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911575
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911575
    reference: chr 3
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.575G>C
  hgvsp: ENSP00000408631.1:p.Arg192Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.323G>C
  hgvsp: ENSP00000392975.1:p.Arg108Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.323G>C
  hgvsp: ENSP00000400649.1:p.Arg108Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2595G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.545G>C
  hgvsp: ENSP00000338642.2:p.Arg182Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2595G>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34807
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg192Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ

3-9911575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911575
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911575
    reference: chr 3
allele count: 4
allele frequency: 3.302128221638846e-5
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.323G>A
  hgvsp: ENSP00000392975.1:p.Arg108His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.323G>A
  hgvsp: ENSP00000400649.1:p.Arg108His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.545G>A
  hgvsp: ENSP00000338642.2:p.Arg182His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.575G>A
  hgvsp: ENSP00000408631.1:p.Arg192His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2595G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2595G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14917
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29760
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6886
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg192His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

3-9911576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911576
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911576
    reference: chr 3
allele count: 2
allele frequency: 1.650655310158133e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.322C>T
  hgvsp: ENSP00000400649.1:p.Arg108Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.544C>T
  hgvsp: ENSP00000338642.2:p.Arg182Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.574C>T
  hgvsp: ENSP00000408631.1:p.Arg192Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.322C>T
  hgvsp: ENSP00000392975.1:p.Arg108Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2596C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2596C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34865
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6885
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg192Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

3-9911577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911577
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911577
    reference: chr 3
allele count: 5
allele frequency: 4.12609341475491e-5
allele num: 121180
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2597G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.543G>A
  hgvsp: ENST00000336832.2:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2597G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.573G>A
  hgvsp: ENST00000430427.1:c.573G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.321G>A
  hgvsp: ENST00000423850.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.321G>A
  hgvsp: ENST00000455015.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6796
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29754
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6888
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7582
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2831
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34880
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys191Lys
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum

3-9911581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911581
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911581
    reference: chr 3
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2601C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.317C>T
  hgvsp: ENSP00000392975.1:p.Ala106Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.317C>T
  hgvsp: ENSP00000400649.1:p.Ala106Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.539C>T
  hgvsp: ENSP00000338642.2:p.Ala180Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2601C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.569C>T
  hgvsp: ENSP00000408631.1:p.Ala190Val
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6893
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34890
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7590
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala190Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

3-9911586-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911586
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911586
    reference: chr 3
allele count: 10
allele frequency: 8.246470510621453e-5
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2606T>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.312T>A
  hgvsp: ENSP00000392975.1:p.Cys104Ter
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.312T>A
  hgvsp: ENSP00000400649.1:p.Cys104Ter
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.534T>A
  hgvsp: ENSP00000338642.2:p.Cys178Ter
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2606T>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.564T>A
  hgvsp: ENSP00000408631.1:p.Cys188Ter
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6907
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys188Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

3-9911592-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911592
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911592
    reference: chr 3
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.306C>G
  hgvsp: ENSP00000392975.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2612C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.306C>G
  hgvsp: ENSP00000400649.1:p.His102Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2612C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.528C>G
  hgvsp: ENSP00000338642.2:p.His176Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.558C>G
  hgvsp: ENSP00000408631.1:p.His186Gln
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6902
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His186Gln
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

3-9911593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911593
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911593
    reference: chr 3
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.305A>G
  hgvsp: ENSP00000400649.1:p.His102Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.527A>G
  hgvsp: ENSP00000338642.2:p.His176Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2613A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2613A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.557A>G
  hgvsp: ENSP00000408631.1:p.His186Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.305A>G
  hgvsp: ENSP00000392975.1:p.His102Arg
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6903
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3386
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His186Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

3-9911599-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911599
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911599
    reference: chr 3
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.299A>T
  hgvsp: ENSP00000392975.1:p.Asp100Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2619A>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.299A>T
  hgvsp: ENSP00000400649.1:p.Asp100Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2619A>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.521A>T
  hgvsp: ENSP00000338642.2:p.Asp174Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.551A>T
  hgvsp: ENSP00000408631.1:p.Asp184Val
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3387
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6907
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp184Val
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

3-9911602-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911602
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911602
    reference: chr 3
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.296A>G
  hgvsp: ENSP00000392975.1:p.Tyr99Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.548A>G
  hgvsp: ENSP00000408631.1:p.Tyr183Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2622A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2622A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.296A>G
  hgvsp: ENSP00000400649.1:p.Tyr99Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.518A>G
  hgvsp: ENSP00000338642.2:p.Tyr173Cys
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6907
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr183Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

3-9911604-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911604
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911604
    reference: chr 3
allele count: 5
allele frequency: 4.120109430106464e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.294C>T
  hgvsp: ENST00000423850.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.294C>T
  hgvsp: ENST00000455015.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.516C>T
  hgvsp: ENST00000336832.2:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2624C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.546C>T
  hgvsp: ENST00000430427.1:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2624C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7616
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser182Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

3-9911610-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911610
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911610
    reference: chr 3
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2630C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2630C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.288C>T
  hgvsp: ENST00000455015.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.288C>T
  hgvsp: ENST00000423850.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.510C>T
  hgvsp: ENST00000336832.2:c.510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.540C>T
  hgvsp: ENST00000430427.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6908
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser180Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

3-9911616-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911616
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911616
    reference: chr 3
allele count: 14
allele frequency: 1.153497569415836e-4
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.534A>G
  hgvsp: ENST00000430427.1:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2636A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.504A>G
  hgvsp: ENST00000336832.2:c.504A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.282A>G
  hgvsp: ENST00000423850.1:c.282A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.282A>G
  hgvsp: ENST00000455015.1:c.282A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2636A>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7624
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr178Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

3-9911620-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911620
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911620
    reference: chr 3
allele count: 7
allele frequency: 5.767202741892961e-5
allele num: 121376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.278A>G
  hgvsp: ENSP00000392975.1:p.Asp93Gly
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2640A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2640A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.278A>G
  hgvsp: ENSP00000400649.1:p.Asp93Gly
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.500A>G
  hgvsp: ENSP00000338642.2:p.Asp167Gly
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.530A>G
  hgvsp: ENSP00000408631.1:p.Asp177Gly
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6909
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp177Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

3-9911623-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911623
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911623
    reference: chr 3
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.275A>G
  hgvsp: ENSP00000392975.1:p.Tyr92Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2643A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2643A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.497A>G
  hgvsp: ENSP00000338642.2:p.Tyr166Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.275A>G
  hgvsp: ENSP00000400649.1:p.Tyr92Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.527A>G
  hgvsp: ENSP00000408631.1:p.Tyr176Cys
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7630
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr176Cys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/3-9911626-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911626
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911626
    reference: chr 3
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2646T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.524T>G
  hgvsp: ENSP00000408631.1:p.Phe175Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2646T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.272T>G
  hgvsp: ENSP00000392975.1:p.Phe91Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.494T>G
  hgvsp: ENSP00000338642.2:p.Phe165Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.272T>G
  hgvsp: ENSP00000400649.1:p.Phe91Cys
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6904
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe175Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

3-9911631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911631
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911631
    reference: chr 3
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.267G>A
  hgvsp: ENST00000455015.1:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.519G>A
  hgvsp: ENST00000430427.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2651G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.267G>A
  hgvsp: ENST00000423850.1:c.267G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.489G>A
  hgvsp: ENST00000336832.2:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2651G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala173Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

3-9911632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911632
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911632
    reference: chr 3
allele count: 11
allele frequency: 9.062149871482238e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.266C>T
  hgvsp: ENSP00000392975.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.266C>T
  hgvsp: ENSP00000400649.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.488C>T
  hgvsp: ENSP00000338642.2:p.Ala163Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.518C>T
  hgvsp: ENSP00000408631.1:p.Ala173Val
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2652C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2652C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala173Val
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

3-9911635-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911635
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911635
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.263A>G
  hgvsp: ENSP00000400649.1:p.Lys88Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2655A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.263A>G
  hgvsp: ENSP00000392975.1:p.Lys88Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.515A>G
  hgvsp: ENSP00000408631.1:p.Lys172Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.485A>G
  hgvsp: ENSP00000338642.2:p.Lys162Arg
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2655A>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7632
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35008
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys172Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-9911636-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911636
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911636
    reference: chr 3
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.484A>C
  hgvsp: ENSP00000338642.2:p.Lys162Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2656A>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.262A>C
  hgvsp: ENSP00000400649.1:p.Lys88Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.262A>C
  hgvsp: ENSP00000392975.1:p.Lys88Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.514A>C
  hgvsp: ENSP00000408631.1:p.Lys172Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2656A>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6906
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35007
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys172Gln
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum

3-9911637-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911637
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911637
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2657G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.261G>A
  hgvsp: ENST00000455015.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2657G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.483G>A
  hgvsp: ENST00000336832.2:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.261G>A
  hgvsp: ENST00000423850.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.513G>A
  hgvsp: ENST00000430427.1:c.513G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val171Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-9911639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911639
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911639
    reference: chr 3
allele count: 82
allele frequency: 6.755086909959635e-4
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2659G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.481G>A
  hgvsp: ENSP00000338642.2:p.Val161Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.259G>A
  hgvsp: ENSP00000392975.1:p.Val87Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2659G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.511G>A
  hgvsp: ENSP00000408631.1:p.Val171Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.259G>A
  hgvsp: ENSP00000400649.1:p.Val87Met
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val171Met
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

3-9911640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911640
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911640
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.480C>T
  hgvsp: ENST00000336832.2:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.258C>T
  hgvsp: ENST00000455015.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.258C>T
  hgvsp: ENST00000423850.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2660C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2660C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.510C>T
  hgvsp: ENST00000430427.1:c.510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6915
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35004
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn170Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

3-9911646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911646
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911646
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2666C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.252C>T
  hgvsp: ENST00000423850.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.504C>T
  hgvsp: ENST00000430427.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.252C>T
  hgvsp: ENST00000455015.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2666C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.474C>T
  hgvsp: ENST00000336832.2:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys168Cys
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-9911651-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911651
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911651
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2671G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.469G>T
  hgvsp: ENSP00000338642.2:p.Gly157Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2671G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.247G>T
  hgvsp: ENSP00000400649.1:p.Gly83Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.247G>T
  hgvsp: ENSP00000392975.1:p.Gly83Cys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.499G>T
  hgvsp: ENSP00000408631.1:p.Gly167Cys
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7638
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly167Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-9911653-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911653
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911653
    reference: chr 3
allele count: 8
allele frequency: 6.590220113351786e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2673T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.245T>C
  hgvsp: ENSP00000392975.1:p.Ile82Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.245T>C
  hgvsp: ENSP00000400649.1:p.Ile82Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.497T>C
  hgvsp: ENSP00000408631.1:p.Ile166Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.467T>C
  hgvsp: ENSP00000338642.2:p.Ile156Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2673T>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6922
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile166Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

3-9911673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911673
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911673
    reference: chr 3
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.225G>A
  hgvsp: ENST00000423850.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.447G>A
  hgvsp: ENST00000336832.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2693G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.225G>A
  hgvsp: ENST00000455015.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2693G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.477G>A
  hgvsp: ENST00000430427.1:c.477G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34999
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys159Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

3-9911677-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911677
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911676
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.220delT
  hgvsp: ENSP00000400649.1:p.Tyr74ThrfsTer3
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2698delT
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.220delT
  hgvsp: ENSP00000392975.1:p.Tyr74ThrfsTer3
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.442delT
  hgvsp: ENSP00000338642.2:p.Tyr148ThrfsTer3
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2698delT
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.472delT
  hgvsp: ENSP00000408631.1:p.Tyr158ThrfsTer3
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Tyr158ThrfsTer3
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: TA
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

3-9911679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911679
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911679
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2699G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.441G>A
  hgvsp: ENST00000336832.2:c.441G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.219G>A
  hgvsp: ENST00000455015.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2699G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.219G>A
  hgvsp: ENST00000423850.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.471G>A
  hgvsp: ENST00000430427.1:c.471G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu157Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-9911682-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911682
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911682
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.216T>C
  hgvsp: ENST00000423850.1:c.216T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.438T>C
  hgvsp: ENST00000336832.2:c.438T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.216T>C
  hgvsp: ENST00000455015.1:c.216T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.468T>C
  hgvsp: ENST00000430427.1:c.468T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2702T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2702T>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp156Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

3-9911688-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911688
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911688
    reference: chr 3
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.210G>C
  hgvsp: ENST00000423850.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.210G>C
  hgvsp: ENST00000455015.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2708G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.462G>C
  hgvsp: ENST00000430427.1:c.462G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.432G>C
  hgvsp: ENST00000336832.2:c.432G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2708G>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr154Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

3-9911688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911688
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911688
    reference: chr 3
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.210G>A
  hgvsp: ENST00000455015.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2708G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.462G>A
  hgvsp: ENST00000430427.1:c.462G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2708G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.432G>A
  hgvsp: ENST00000336832.2:c.432G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.210G>A
  hgvsp: ENST00000423850.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2350
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34978
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr154Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

3-9911689-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911689
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911689
    reference: chr 3
allele count: 10
allele frequency: 8.237775141689732e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.209C>T
  hgvsp: ENSP00000400649.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.209C>T
  hgvsp: ENSP00000392975.1:p.Thr70Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.431C>T
  hgvsp: ENSP00000338642.2:p.Thr144Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2709C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.461C>T
  hgvsp: ENSP00000408631.1:p.Thr154Met
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2709C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15213
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7633
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2348
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr154Met
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff

3-9911689-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911689
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911689
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.209C>A
  hgvsp: ENSP00000392975.1:p.Thr70Lys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.209C>A
  hgvsp: ENSP00000400649.1:p.Thr70Lys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.461C>A
  hgvsp: ENSP00000408631.1:p.Thr154Lys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.431C>A
  hgvsp: ENSP00000338642.2:p.Thr144Lys
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2709C>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2709C>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7633
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr154Lys
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

3-9911693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911693
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911693
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.427G>A
  hgvsp: ENSP00000338642.2:p.Val143Ile
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2713G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.205G>A
  hgvsp: ENSP00000392975.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.205G>A
  hgvsp: ENSP00000400649.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.457G>A
  hgvsp: ENSP00000408631.1:p.Val153Ile
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2713G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val153Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

3-9911695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911695
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911695
    reference: chr 3
allele count: 26
allele frequency: 2.141856825109152e-4
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2715G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.455G>A
  hgvsp: ENSP00000408631.1:p.Arg152His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2715G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.203G>A
  hgvsp: ENSP00000400649.1:p.Arg68His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.425G>A
  hgvsp: ENSP00000338642.2:p.Arg142His
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.203G>A
  hgvsp: ENSP00000392975.1:p.Arg68His
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg152His
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-9911699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911699
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911699
    reference: chr 3
allele count: 3
allele frequency: 2.471413978317461e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2719G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.421G>A
  hgvsp: ENSP00000338642.2:p.Ala141Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.199G>A
  hgvsp: ENSP00000392975.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.199G>A
  hgvsp: ENSP00000400649.1:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.451G>A
  hgvsp: ENSP00000408631.1:p.Ala151Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2719G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala151Thr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

3-9911707-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911707
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911707
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.413T>C
  hgvsp: ENSP00000338642.2:p.Ile138Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2727T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.191T>C
  hgvsp: ENSP00000400649.1:p.Ile64Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.443T>C
  hgvsp: ENSP00000408631.1:p.Ile148Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2727T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.191T>C
  hgvsp: ENSP00000392975.1:p.Ile64Thr
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7629
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile148Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

3-9911707-ATCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911707
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911704
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.188_190delAGA
  hgvsp: ENSP00000400649.1:p.Lys63del
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2730_208-2728delAGA
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.440_442delAGA
  hgvsp: ENSP00000408631.1:p.Lys147del
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.188_190delAGA
  hgvsp: ENSP00000392975.1:p.Lys63del
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.410_412delAGA
  hgvsp: ENSP00000338642.2:p.Lys137del
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2730_208-2728delAGA
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7629
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys147del
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: ATCT
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

3-9911712-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911712
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911712
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.186G>C
  hgvsp: ENSP00000392975.1:p.Lys62Asn
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2732G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.438G>C
  hgvsp: ENSP00000408631.1:p.Lys146Asn
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2732G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.186G>C
  hgvsp: ENSP00000400649.1:p.Lys62Asn
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.408G>C
  hgvsp: ENSP00000338642.2:p.Lys136Asn
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34956
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys146Asn
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-9911717-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911717
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911717
    reference: chr 3
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2737G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.433G>T
  hgvsp: ENSP00000408631.1:p.Ala145Ser
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.181G>T
  hgvsp: ENSP00000392975.1:p.Ala61Ser
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.403G>T
  hgvsp: ENSP00000338642.2:p.Ala135Ser
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.181G>T
  hgvsp: ENSP00000400649.1:p.Ala61Ser
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2737G>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6976
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala145Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

3-9911717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911717
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911717
    reference: chr 3
allele count: 58
allele frequency: 4.778145749921737e-4
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.433G>A
  hgvsp: ENSP00000408631.1:p.Ala145Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.181G>A
  hgvsp: ENSP00000400649.1:p.Ala61Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2737G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2737G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.181G>A
  hgvsp: ENSP00000392975.1:p.Ala61Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.403G>A
  hgvsp: ENSP00000338642.2:p.Ala135Thr
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala145Thr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

3-9911723-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911723
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911723
    reference: chr 3
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.427A>C
  hgvsp: ENSP00000408631.1:p.Lys143Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.175A>C
  hgvsp: ENSP00000392975.1:p.Lys59Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2743A>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2743A>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.175A>C
  hgvsp: ENSP00000400649.1:p.Lys59Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.397A>C
  hgvsp: ENSP00000338642.2:p.Lys133Gln
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys143Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-9911725-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911725
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911725
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.173A>C
  hgvsp: ENSP00000400649.1:p.His58Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.395A>C
  hgvsp: ENSP00000338642.2:p.His132Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2745A>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2745A>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.173A>C
  hgvsp: ENSP00000392975.1:p.His58Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.425A>C
  hgvsp: ENSP00000408631.1:p.His142Pro
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His142Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-9911728-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911728
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911728
    reference: chr 3
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2748C>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.170C>A
  hgvsp: ENSP00000400649.1:p.Ser57Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.170C>A
  hgvsp: ENSP00000392975.1:p.Ser57Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.422C>A
  hgvsp: ENSP00000408631.1:p.Ser141Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.392C>A
  hgvsp: ENSP00000338642.2:p.Ser131Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2748C>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser141Tyr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

3-9911732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911732
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911732
    reference: chr 3
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.418C>T
  hgvsp: ENSP00000408631.1:p.Leu140Phe
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.166C>T
  hgvsp: ENSP00000400649.1:p.Leu56Phe
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2752C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2752C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.166C>T
  hgvsp: ENSP00000392975.1:p.Leu56Phe
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.388C>T
  hgvsp: ENSP00000338642.2:p.Leu130Phe
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu140Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum

3-9911733-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911733
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911733
    reference: chr 3
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.165C>G
  hgvsp: ENST00000423850.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.165C>G
  hgvsp: ENST00000455015.1:c.165C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2753C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.417C>G
  hgvsp: ENST00000430427.1:c.417C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2753C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.387C>G
  hgvsp: ENST00000336832.2:c.387C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7626
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser139Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

3-9911737-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911737
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911737
    reference: chr 3
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.161T>C
  hgvsp: ENSP00000400649.1:p.Leu54Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.383T>C
  hgvsp: ENSP00000338642.2:p.Leu128Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.161T>C
  hgvsp: ENSP00000392975.1:p.Leu54Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.413T>C
  hgvsp: ENSP00000408631.1:p.Leu138Pro
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2757T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2757T>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6941
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu138Pro
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

3-9911737-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911737
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911737
    reference: chr 3
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.161T>A
  hgvsp: ENSP00000392975.1:p.Leu54Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2757T>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.383T>A
  hgvsp: ENSP00000338642.2:p.Leu128Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2757T>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.413T>A
  hgvsp: ENSP00000408631.1:p.Leu138Gln
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.161T>A
  hgvsp: ENSP00000400649.1:p.Leu54Gln
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6941
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu138Gln
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

3-9911740-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911740
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911740
    reference: chr 3
allele count: 7
allele frequency: 5.76672762921589e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2760C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2760C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.410C>T
  hgvsp: ENSP00000408631.1:p.Pro137Leu
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.158C>T
  hgvsp: ENSP00000392975.1:p.Pro53Leu
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.380C>T
  hgvsp: ENSP00000338642.2:p.Pro127Leu
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.158C>T
  hgvsp: ENSP00000400649.1:p.Pro53Leu
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34961
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6946
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Pro137Leu
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

3-9911741-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911741
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911741
    reference: chr 3
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2761C>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.409C>A
  hgvsp: ENSP00000408631.1:p.Pro137Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.157C>A
  hgvsp: ENSP00000400649.1:p.Pro53Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2761C>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.157C>A
  hgvsp: ENSP00000392975.1:p.Pro53Thr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.379C>A
  hgvsp: ENSP00000338642.2:p.Pro127Thr
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6941
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro137Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

3-9911742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911742
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911742
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.156C>T
  hgvsp: ENST00000423850.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2762C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2762C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.156C>T
  hgvsp: ENST00000455015.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.378C>T
  hgvsp: ENST00000336832.2:c.378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.408C>T
  hgvsp: ENST00000430427.1:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7628
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His136His
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

3-9911744-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911744
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911744
    reference: chr 3
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.376C>T
  hgvsp: ENSP00000338642.2:p.His126Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.154C>T
  hgvsp: ENSP00000400649.1:p.His52Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.406C>T
  hgvsp: ENSP00000408631.1:p.His136Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.154C>T
  hgvsp: ENSP00000392975.1:p.His52Tyr
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2764C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2764C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His136Tyr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

3-9911744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911744
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911744
    reference: chr 3
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.406C>G
  hgvsp: ENSP00000408631.1:p.His136Asp
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2764C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2764C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.154C>G
  hgvsp: ENSP00000400649.1:p.His52Asp
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.154C>G
  hgvsp: ENSP00000392975.1:p.His52Asp
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.376C>G
  hgvsp: ENSP00000338642.2:p.His126Asp
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His136Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

3-9911754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911754
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911754
    reference: chr 3
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2774G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2774G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-1G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-1G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-1G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-1G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6941
  bin: 9.75e1
  variant carriers: 1
hgvs: c.397-1G>A
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

3-9911759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911759
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911759
    reference: chr 3
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-6A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-6A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-6A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2779A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-6A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2779A>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 8.75e1
  variant carriers: 0
hgvs: c.397-6A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

3-9911765-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911765
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911765
    reference: chr 3
allele count: 57
allele frequency: 4.695996045477014e-4
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-12G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-12G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2785G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-12G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2785G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-12G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum

3-9911768-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911768
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911768
    reference: chr 3
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-15C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2788C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-15C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-15C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-15C>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2788C>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2864
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34948
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

3-9911778-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911778
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911778
    reference: chr 3
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-25T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2798T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-25T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2798T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-25T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-25T>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34922
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6951
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7615
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/3-9911782-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911782
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911782
    reference: chr 3
allele count: 2126
allele frequency: 1.75163958738424e-2
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2802G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2802G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-29G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-29G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-29G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-29G>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 14779
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 5.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 28404
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 6.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 9.75e1
  variant carriers: 1215
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 6.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 175
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

3-9911794-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911794
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911794
    reference: chr 3
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-41T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-41T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2814T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-41T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-41T>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2814T>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7586
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34671
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

3-9911795-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911795
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911795
    reference: chr 3
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-42A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2815A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-42A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-42A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-42A>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2815A>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2842
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

3-9911799-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911799
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911799
    reference: chr 3
allele count: 975
allele frequency: 8.033683794205861e-3
allele num: 121364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-46G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-46G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-46G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2819G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2819G>C
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-46G>C
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 27914
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15195
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 6.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 9.75e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3320
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8062
  bin: 9.75e1
  variant carriers: 958
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 17
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

3-9911800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911800
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911800
    reference: chr 3
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2820G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.367-47G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.145-47G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.397-47G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2820G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.145-47G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7293
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

3-9911804-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911804
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911804
    reference: chr 3
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2824C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+44C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+44C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+44C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+44C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2824C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7293
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/3-9911806-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911806
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911806
    reference: chr 3
allele count: 24
allele frequency: 1.977619934408939e-4
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2826G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+42G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+42G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+42G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2826G>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+42G>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

3-9911808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911808
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911808
    reference: chr 3
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2828G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+40G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+40G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+40G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2828G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+40G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34348
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

3-9911809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911809
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911809
    reference: chr 3
allele count: 21
allele frequency: 1.730560042192702e-4
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+39C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+39C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+39C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+39C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2829C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2829C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2857
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/3-9911810-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911810
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911810
    reference: chr 3
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2830T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2830T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+38T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+38T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+38T>G
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+38T>G
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3389
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

3-9911818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911818
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911818
    reference: chr 3
allele count: 4
allele frequency: 3.297174321606383e-5
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+30G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+30G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2838G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+30G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2838G>A
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+30G>A
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34189
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

3-9911829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 9911829
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 9911829
    reference: chr 3
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000400649
  ensembl transcript: ENST00000423850
  gene symbol: CIDEC
  hgvsc: ENST00000423850.1:c.144+19C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000411356
  ensembl transcript: ENST00000443115
  gene symbol: CIDEC
  hgvsc: ENST00000443115.1:c.208-2849C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000373328
  ensembl transcript: ENST00000383817
  gene symbol: CIDEC
  hgvsc: ENST00000383817.1:c.208-2849C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000338642
  ensembl transcript: ENST00000336832
  gene symbol: CIDEC
  hgvsc: ENST00000336832.2:c.366+19C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000408631
  ensembl transcript: ENST00000430427
  gene symbol: CIDEC
  hgvsc: ENST00000430427.1:c.396+19C>T
  variant of: http://identifiers.org/hgnc/24229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187288
  ensembl protein: ENSP00000392975
  ensembl transcript: ENST00000455015
  gene symbol: CIDEC
  hgvsc: ENST00000455015.1:c.144+19C>T
  variant of: http://identifiers.org/hgnc/24229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.790510295434199e-4
allele num: 11170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.598123965422108e-5
allele num: 65244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.374e1

DP
type: SiteQuality
SIO_000300: 1.651095e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

FS
type: SiteQuality
SIO_000300: 7.562e0

MQRankSum
type: SiteQuality
SIO_000300: 8.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 31313
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 599
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530549773478634e-5
allele num: 65336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.272e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.86e-1

DP
type: SiteQuality
SIO_000300: 1.655995e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.8e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

GenotypeQuality
all individuals: 2325
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.233e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

DP
type: SiteQuality
SIO_000300: 1.710836e6

FS
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003724618526973e-5
allele num: 66584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 1.710836e6

FS
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.233e0

QD
type: SiteQuality
SIO_000300: 1.267e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 3.367e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

DP
type: SiteQuality
SIO_000300: 1.711893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.464e1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 1415
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.507282063601693e-5
allele num: 66602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.14e-1

FS
type: SiteQuality
SIO_000300: 1.9773e1

DP
type: SiteQuality
SIO_000300: 1.711946e6

MQRankSum
type: SiteQuality
SIO_000300: -3.506e0

VQSLOD
type: SiteQuality
SIO_000300: -5.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.765e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 5.13e0

MQ
type: SiteQuality
SIO_000300: 5.588e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2835
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GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.712739e6

FS
type: SiteQuality
SIO_000300: 2.803e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.01e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.665511265164644e-4
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.69e0

DP
type: SiteQuality
SIO_000300: 1.714364e6

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2854
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GenotypeQuality
all individuals: 8
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.714994e6

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
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ClippingRankSum
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SIO_000300: 1.01e0

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.031e0

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.68e-1

VQSLOD
type: SiteQuality
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QD
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SIO_000300: 1.341e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 1.893e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 1.716113e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.36e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
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SIO_000300: 2.03e0

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.716432e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.633e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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FS
type: SiteQuality
SIO_000300: 6.437e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.857e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.499160470136724e-4
allele num: 66704
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

DP
type: SiteQuality
SIO_000300: 1.717126e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.282e0

MQ
type: SiteQuality
SIO_000300: 5.414e1

VQSLOD
type: SiteQuality
SIO_000300: -2.424e0

FS
type: SiteQuality
SIO_000300: 8.936e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.728181468665898e-4
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.138e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

DP
type: SiteQuality
SIO_000300: 1.717086e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 6903
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.334e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.744e0

DP
type: SiteQuality
SIO_000300: 1.717053e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

QD
type: SiteQuality
SIO_000300: 1.524e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2347
bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.137e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

BaseQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
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allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
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Other
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Latino
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South Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498845888665727e-4
allele num: 66718
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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FS
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DP
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VQSLOD
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ClippingRankSum
type: SiteQuality
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498800959232614e-5
allele num: 66720
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European (Finnish)
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African
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South Asian
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Other
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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allele num: 16512
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Other
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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QD
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MQ
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7631
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6905
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.209e0

QD
type: SiteQuality
SIO_000300: 1.507e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.31e-1

DP
type: SiteQuality
SIO_000300: 1.717191e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6970
bin: 9.75e1
variant carriers: 82

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.909656244601831e-4
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 63
allele frequency: 9.442446043165468e-4
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.72361e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.597e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.271e0

MQRankSum
type: SiteQuality
SIO_000300: -2.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.881999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1422
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variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 2.094e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

DP
type: SiteQuality
SIO_000300: 1.718121e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 6915
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0293e1

VQSLOD
type: SiteQuality
SIO_000300: -8.550000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.718137e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.388e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.604e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6916
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35000
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.718276e6

VQSLOD
type: SiteQuality
SIO_000300: -7.102000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.715e0

FS
type: SiteQuality
SIO_000300: 3.801e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 1.057e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.326e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.075e0

GenotypeQuality
all individuals: 2352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 4.804920238324044e-4
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

DP
type: SiteQuality
SIO_000300: 1.718909e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

QD
type: SiteQuality
SIO_000300: 1.953e1

FS
type: SiteQuality
SIO_000300: 6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.94e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 6920
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.556e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.131e0

FS
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 1.718746e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

GenotypeQuality
all individuals: 7638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2859
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variant carriers: 0

GenotypeQuality
all individuals: 1422
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variant carriers: 0

GenotypeQuality
all individuals: 2350
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 6921
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 3.83e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

FS
type: SiteQuality
SIO_000300: 5.9e-1

DP
type: SiteQuality
SIO_000300: 1.718784e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

GenotypeQuality
all individuals: 2858
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 34990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 8.25e1
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GenotypeQuality
all individuals: 7637
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.372e0

QD
type: SiteQuality
SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.576e0

DP
type: SiteQuality
SIO_000300: 1.718944e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
all individuals: 34984
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7639
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6921
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.648e1

FS
type: SiteQuality
SIO_000300: 1.833e0

VQSLOD
type: SiteQuality
SIO_000300: -1.274e0

QD
type: SiteQuality
SIO_000300: 1.212e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.655e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

DP
type: SiteQuality
SIO_000300: 1.718774e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

GenotypeQuality
all individuals: 34978
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7634
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variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6923
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.719059e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.617e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 7634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6923
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.617e0

QD
type: SiteQuality
SIO_000300: 1.32e1

DP
type: SiteQuality
SIO_000300: 1.719059e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6927
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 34972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.202e1

DP
type: SiteQuality
SIO_000300: 1.719604e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.599999999999999e-2

GenotypeQuality
all individuals: 2348
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6927
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.923e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.56e-1

QD
type: SiteQuality
SIO_000300: 1.202e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.719604e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6922
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.718761e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.035e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.227e1

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

FS
type: SiteQuality
SIO_000300: 8.206e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.449e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 34958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6940
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.447242206235012e-4
allele num: 66720
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.722189e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.268e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6924
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34971
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.117e1

DP
type: SiteQuality
SIO_000300: 1.719222e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.121e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.914e0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1423
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.183e0

DP
type: SiteQuality
SIO_000300: 1.719188e6

FS
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.581e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.055e0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 34968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 6924
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.719188e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

QD
type: SiteQuality
SIO_000300: 1.581e1

FS
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: -1.183e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.055e0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6925
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GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.719141e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 8.53e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.439e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 34933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7614
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.726629e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.458e0

MQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6976
bin: 9.75e1
variant carriers: 58

GenotypeQuality
all individuals: 7614
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 55
allele frequency: 5.285412262156448e-3
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.458e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

DP
type: SiteQuality
SIO_000300: 1.726629e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
all individuals: 3383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7621
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34960
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6939
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.55e0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.923e1

DP
type: SiteQuality
SIO_000300: 1.720839e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.525e1

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6938
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2342
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34961
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 1.720687e6

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 5.19e-1

FS
type: SiteQuality
SIO_000300: 2.363e0

QD
type: SiteQuality
SIO_000300: 1.273e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.76e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6938
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3381
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7624
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 8.340999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 1.720767e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.928e0

QD
type: SiteQuality
SIO_000300: 9.51e0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6938
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3378
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7626
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.754e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.264e1

DP
type: SiteQuality
SIO_000300: 1.720898e6

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

GenotypeQuality
all individuals: 34968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6939
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

DP
type: SiteQuality
SIO_000300: 1.721235e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.057e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.218e1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 34970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7625
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.360000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.151e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.34e1

DP
type: SiteQuality
SIO_000300: 1.721478e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

DP
type: SiteQuality
SIO_000300: 1.721478e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.360000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.151e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
SIO_000300: 1.34e1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

GenotypeQuality
all individuals: 1428
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.088745088976196e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.284e1

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

DP
type: SiteQuality
SIO_000300: 1.721872e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7624
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997781641585227e-5
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0274e1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.352e0

DP
type: SiteQuality
SIO_000300: 1.721295e6

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.678e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.046e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.721101e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

GenotypeQuality
all individuals: 34965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.454e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.721511e6

QD
type: SiteQuality
SIO_000300: 1.492e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

FS
type: SiteQuality
SIO_000300: 1.816e0

GenotypeQuality
all individuals: 34965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995563283170454e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

FS
type: SiteQuality
SIO_000300: 1.816e0

QD
type: SiteQuality
SIO_000300: 1.492e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.454e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 1.721511e6

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 6.31e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: -6.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.721131e6

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.582e1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

DP
type: SiteQuality
SIO_000300: 1.721228e6

FS
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.437e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.93e0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6989
bin: 9.75e1
variant carriers: 57

GenotypeQuality
all individuals: 1110
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
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GenotypeQuality
all individuals: 2
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 7.345005396330495e-4
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.559721802237678e-4
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.76e0

DP
type: SiteQuality
SIO_000300: 1.726927e6

QD
type: SiteQuality
SIO_000300: 1.299e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.343e0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1426
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variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7619
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 6949
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.721853e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

QD
type: SiteQuality
SIO_000300: 8.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.101e0

FS
type: SiteQuality
SIO_000300: 4.029e0

VQSLOD
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
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FS
type: SiteQuality
SIO_000300: 2.336e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.252e0

QD
type: SiteQuality
SIO_000300: 1.145e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

DP
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SIO_000300: 1.721801e6

MQ
type: SiteQuality
SIO_000300: 5.785e1

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1951

GenotypeQuality
all individuals: 2224
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 74
allele frequency: 6.391432026256694e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.405286343612335e-3
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 38
allele frequency: 2.301914223406833e-3
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1945
allele frequency: 1.869113972708053e-1
allele num: 10406
num of homozygotes: 175

European (Non-Finnish)
type: Population
allele count: 64
allele frequency: 9.594339339789524e-4
allele num: 66706
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

DP
type: SiteQuality
SIO_000300: 1.887661e6

QD
type: SiteQuality
SIO_000300: 1.631e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.474e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.082e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 14
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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allele num: 8652
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

DP
type: SiteQuality
SIO_000300: 1.746506e6

QD
type: SiteQuality
SIO_000300: 8.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.391e1

VQSLOD
type: SiteQuality
SIO_000300: -3.199e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.5621e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3379
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.973e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

QD
type: SiteQuality
SIO_000300: 1.439e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

DP
type: SiteQuality
SIO_000300: 1.746475e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -9.891e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34068
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2790
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 610
allele frequency: 5.269523151347616e-2
allele num: 11576
num of homozygotes: 16

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 32
allele frequency: 1.938219261053907e-3
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.415011037527594e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 23
allele frequency: 3.477472029029332e-3
allele num: 6614
num of homozygotes: 1

African
type: Population
allele count: 17
allele frequency: 1.633986928104575e-3
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 289
allele frequency: 4.33270366705646e-3
allele num: 66702
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 6.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.12e-2

QD
type: SiteQuality
SIO_000300: 1.539e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

DP
type: SiteQuality
SIO_000300: 1.816383e6

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.529e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.948e0

FS
type: SiteQuality
SIO_000300: 6.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.869e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.271e1

DP
type: SiteQuality
SIO_000300: 1.756614e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 1.161e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.658e0

QD
type: SiteQuality
SIO_000300: 2.65e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.756379e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
all individuals: 34402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7582
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7314
bin: 9.75e1
variant carriers: 24

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.448379261746979e-4
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.179e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.758159e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7293
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7581
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 5.16e0

DP
type: SiteQuality
SIO_000300: 1.756274e6

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.554e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7306
bin: 9.75e1
variant carriers: 21

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.090116279069767e-3
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: -2.618e0

DP
type: SiteQuality
SIO_000300: 1.756926e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 2.802e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 2314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

VQSLOD
type: SiteQuality
SIO_000300: -3.072e0

QD
type: SiteQuality
SIO_000300: 2.006e1

FS
type: SiteQuality
SIO_000300: 6.345e0

DP
type: SiteQuality
SIO_000300: 1.756176e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.924e1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.028e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1111
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3390
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7301
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456022118541559e-4
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.37e-2

DP
type: SiteQuality
SIO_000300: 1.754905e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e-1

QD
type: SiteQuality
SIO_000300: 1.972e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

FS
type: SiteQuality
SIO_000300: 5.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.5e-2