2-3691354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691354
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691354
    reference: chr 2
allele count: 10
allele frequency: 8.316423272678887e-5
allele num: 120244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*304C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.384C>T
  hgvsp: ENST00000403096.3:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.390C>T
  hgvsp: ENST00000382062.2:c.390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.240C>T
  hgvsp: ENST00000404205.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.312C>T
  hgvsp: ENST00000402922.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.504C>T
  hgvsp: ENST00000418971.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.558C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.312C>T
  hgvsp: ENST00000402794.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.462C>T
  hgvsp: ENST00000349077.4:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.630C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.453C>T
  hgvsp: ENST00000236693.7:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr168Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

2-3691357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691357
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691357
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 120248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.465G>A
  hgvsp: ENST00000349077.4:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.456G>A
  hgvsp: ENST00000236693.7:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.243G>A
  hgvsp: ENST00000404205.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.315G>A
  hgvsp: ENST00000402794.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.633G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.561G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.507G>A
  hgvsp: ENST00000418971.2:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.315G>A
  hgvsp: ENST00000402922.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*307G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.393G>A
  hgvsp: ENST00000382062.2:c.393G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.387G>A
  hgvsp: ENST00000403096.3:c.387G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 29532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu169Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-3691364-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691364
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691364
    reference: chr 2
allele count: 2
allele frequency: 1.664198106142555e-5
allele num: 120178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.463A>G
  hgvsp: ENSP00000236693.7:p.Lys155Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.250A>G
  hgvsp: ENSP00000385827.1:p.Lys84Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.400A>G
  hgvsp: ENSP00000371494.2:p.Lys134Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.514A>G
  hgvsp: ENSP00000411770.2:p.Lys172Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.394A>G
  hgvsp: ENSP00000385130.3:p.Lys132Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.640A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.322A>G
  hgvsp: ENSP00000385653.1:p.Lys108Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.322A>G
  hgvsp: ENSP00000384882.1:p.Lys108Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.472A>G
  hgvsp: ENSP00000339168.4:p.Lys158Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.568A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*314A>G
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys172Glu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

2-3691370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691370
    reference: chr 2
allele count: 1
allele frequency: 8.321544478655239e-6
allele num: 120170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.574G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.406G>A
  hgvsp: ENSP00000371494.2:p.Glu136Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.400G>A
  hgvsp: ENSP00000385130.3:p.Glu134Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.469G>A
  hgvsp: ENSP00000236693.7:p.Glu157Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.328G>A
  hgvsp: ENSP00000385653.1:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.520G>A
  hgvsp: ENSP00000411770.2:p.Glu174Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.646G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.478G>A
  hgvsp: ENSP00000339168.4:p.Glu160Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.328G>A
  hgvsp: ENSP00000384882.1:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.256G>A
  hgvsp: ENSP00000385827.1:p.Glu86Lys
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu174Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-3691376-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691376
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691376
    reference: chr 2
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.580C>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.475C>A
  hgvsp: ENSP00000236693.7:p.Arg159Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*326C>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.526C>A
  hgvsp: ENSP00000411770.2:p.Arg176Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.484C>A
  hgvsp: ENSP00000339168.4:p.Arg162Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.334C>A
  hgvsp: ENSP00000384882.1:p.Arg112Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.412C>A
  hgvsp: ENSP00000371494.2:p.Arg138Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.262C>A
  hgvsp: ENSP00000385827.1:p.Arg88Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.652C>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.334C>A
  hgvsp: ENSP00000385653.1:p.Arg112Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.406C>A
  hgvsp: ENSP00000385130.3:p.Arg136Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg176Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-3691376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691376
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691376
    reference: chr 2
allele count: 3
allele frequency: 2.497502497502498e-5
allele num: 120120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.475C>T
  hgvsp: ENSP00000236693.7:p.Arg159Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.406C>T
  hgvsp: ENSP00000385130.3:p.Arg136Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.652C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.412C>T
  hgvsp: ENSP00000371494.2:p.Arg138Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.262C>T
  hgvsp: ENSP00000385827.1:p.Arg88Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.580C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.334C>T
  hgvsp: ENSP00000385653.1:p.Arg112Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.484C>T
  hgvsp: ENSP00000339168.4:p.Arg162Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.334C>T
  hgvsp: ENSP00000384882.1:p.Arg112Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*326C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.526C>T
  hgvsp: ENSP00000411770.2:p.Arg176Cys
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg176Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-3691377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691377
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691377
    reference: chr 2
allele count: 2
allele frequency: 1.665029387768694e-5
allele num: 120118
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.407G>A
  hgvsp: ENSP00000385130.3:p.Arg136His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.476G>A
  hgvsp: ENSP00000236693.7:p.Arg159His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*327G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.527G>A
  hgvsp: ENSP00000411770.2:p.Arg176His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.335G>A
  hgvsp: ENSP00000385653.1:p.Arg112His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.413G>A
  hgvsp: ENSP00000371494.2:p.Arg138His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.335G>A
  hgvsp: ENSP00000384882.1:p.Arg112His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.485G>A
  hgvsp: ENSP00000339168.4:p.Arg162His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.263G>A
  hgvsp: ENSP00000385827.1:p.Arg88His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.581G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.653G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg176His
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

2-3691382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691382
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691382
    reference: chr 2
allele count: 1
allele frequency: 8.329446258412741e-6
allele num: 120056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.481G>A
  hgvsp: ENSP00000236693.7:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.586G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.490G>A
  hgvsp: ENSP00000339168.4:p.Ala164Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.658G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.412G>A
  hgvsp: ENSP00000385130.3:p.Ala138Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.340G>A
  hgvsp: ENSP00000385653.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*332G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.418G>A
  hgvsp: ENSP00000371494.2:p.Ala140Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.340G>A
  hgvsp: ENSP00000384882.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.268G>A
  hgvsp: ENSP00000385827.1:p.Ala90Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.532G>A
  hgvsp: ENSP00000411770.2:p.Ala178Thr
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala178Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum

2-3691384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691384
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691384
    reference: chr 2
allele count: 7
allele frequency: 5.831195228416247e-5
allele num: 120044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.588G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.270G>A
  hgvsp: ENST00000404205.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.342G>A
  hgvsp: ENST00000402794.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.342G>A
  hgvsp: ENST00000402922.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.483G>A
  hgvsp: ENST00000236693.7:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*334G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.534G>A
  hgvsp: ENST00000418971.2:c.534G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.414G>A
  hgvsp: ENST00000403096.3:c.414G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.420G>A
  hgvsp: ENST00000382062.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.492G>A
  hgvsp: ENST00000349077.4:c.492G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.660G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala178Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP

2-3691387-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691387
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691387
    reference: chr 2
allele count: 54
allele frequency: 4.499400079989335e-4
allele num: 120016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.273C>G
  hgvsp: ENSP00000385827.1:p.Asp91Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.537C>G
  hgvsp: ENSP00000411770.2:p.Asp179Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.663C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.486C>G
  hgvsp: ENSP00000236693.7:p.Asp162Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.345C>G
  hgvsp: ENSP00000385653.1:p.Asp115Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.345C>G
  hgvsp: ENSP00000384882.1:p.Asp115Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.417C>G
  hgvsp: ENSP00000385130.3:p.Asp139Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.423C>G
  hgvsp: ENSP00000371494.2:p.Asp141Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.591C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*337C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.495C>G
  hgvsp: ENSP00000339168.4:p.Asp165Glu
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp179Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

2-3691387-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691387
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691387
    reference: chr 2
allele count: 22
allele frequency: 1.833088921477136e-4
allele num: 120016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.417C>T
  hgvsp: ENST00000403096.3:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*337C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.423C>T
  hgvsp: ENST00000382062.2:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.591C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.345C>T
  hgvsp: ENST00000402794.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.486C>T
  hgvsp: ENST00000236693.7:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.273C>T
  hgvsp: ENST00000404205.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.345C>T
  hgvsp: ENST00000402922.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.663C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.495C>T
  hgvsp: ENST00000349077.4:c.495C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.537C>T
  hgvsp: ENST00000418971.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11668
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Asp179Asp
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

2-3691399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691399
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691399
    reference: chr 2
allele count: 2
allele frequency: 1.66814019050161e-5
allele num: 119894
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.603C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.498C>T
  hgvsp: ENST00000236693.7:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.429C>T
  hgvsp: ENST00000403096.3:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.549C>T
  hgvsp: ENST00000418971.2:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.435C>T
  hgvsp: ENST00000382062.2:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.507C>T
  hgvsp: ENST00000349077.4:c.507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.675C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.357C>T
  hgvsp: ENST00000402922.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.357C>T
  hgvsp: ENST00000402794.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.285C>T
  hgvsp: ENST00000404205.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11493
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser183Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

2-3691406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691406
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691406
    reference: chr 2
allele count: 76
allele frequency: 6.349949033303811e-4
allele num: 119686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.442G>A
  hgvsp: ENSP00000371494.2:p.Gly148Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.364G>A
  hgvsp: ENSP00000384882.1:p.Gly122Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.364G>A
  hgvsp: ENSP00000385653.1:p.Gly122Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.436G>A
  hgvsp: ENSP00000385130.3:p.Gly146Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.292G>A
  hgvsp: ENSP00000385827.1:p.Gly98Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.682G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.514G>A
  hgvsp: ENSP00000339168.4:p.Gly172Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.505G>A
  hgvsp: ENSP00000236693.7:p.Gly169Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.556G>A
  hgvsp: ENSP00000411770.2:p.Gly186Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*356G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.610G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 28994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10242
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11268
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Gly186Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

2-3691409-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691409
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691409
    reference: chr 2
allele count: 2
allele frequency: 1.672800267648043e-5
allele num: 119560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.367C>T
  hgvsp: ENSP00000385653.1:p.Arg123Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.367C>T
  hgvsp: ENSP00000384882.1:p.Arg123Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.508C>T
  hgvsp: ENSP00000236693.7:p.Arg170Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.439C>T
  hgvsp: ENSP00000385130.3:p.Arg147Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.445C>T
  hgvsp: ENSP00000371494.2:p.Arg149Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.559C>T
  hgvsp: ENSP00000411770.2:p.Arg187Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.295C>T
  hgvsp: ENSP00000385827.1:p.Arg99Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.517C>T
  hgvsp: ENSP00000339168.4:p.Arg173Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*359C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.685C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.613C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg187Cys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

2-3691410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691410
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691410
    reference: chr 2
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.518G>A
  hgvsp: ENSP00000339168.4:p.Arg173His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.368G>A
  hgvsp: ENSP00000385653.1:p.Arg123His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.560G>A
  hgvsp: ENSP00000411770.2:p.Arg187His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.446G>A
  hgvsp: ENSP00000371494.2:p.Arg149His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*360G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.296G>A
  hgvsp: ENSP00000385827.1:p.Arg99His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.614G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.440G>A
  hgvsp: ENSP00000385130.3:p.Arg147His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.686G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.509G>A
  hgvsp: ENSP00000236693.7:p.Arg170His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.368G>A
  hgvsp: ENSP00000384882.1:p.Arg123His
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg187His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

2-3691411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691411
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691411
    reference: chr 2
allele count: 5
allele frequency: 4.181371155229223e-5
allele num: 119578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.297C>T
  hgvsp: ENST00000404205.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.369C>T
  hgvsp: ENST00000402794.1:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.561C>T
  hgvsp: ENST00000418971.2:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.369C>T
  hgvsp: ENST00000402922.1:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.687C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.447C>T
  hgvsp: ENST00000382062.2:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.441C>T
  hgvsp: ENST00000403096.3:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.519C>T
  hgvsp: ENST00000349077.4:c.519C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.615C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.510C>T
  hgvsp: ENST00000236693.7:c.510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*361C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11115
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg187Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

2-3691412-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691412
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691412
    reference: chr 2
allele count: 1
allele frequency: 8.356871855726965e-6
allele num: 119662
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.562G>A
  hgvsp: ENSP00000411770.2:p.Gly188Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.370G>A
  hgvsp: ENSP00000384882.1:p.Gly124Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.370G>A
  hgvsp: ENSP00000385653.1:p.Gly124Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.616G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*362G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.298G>A
  hgvsp: ENSP00000385827.1:p.Gly100Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.511G>A
  hgvsp: ENSP00000236693.7:p.Gly171Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.442G>A
  hgvsp: ENSP00000385130.3:p.Gly148Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.448G>A
  hgvsp: ENSP00000371494.2:p.Gly150Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.688G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.520G>A
  hgvsp: ENSP00000339168.4:p.Gly174Arg
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly188Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

2-3691416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691416
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691416
    reference: chr 2
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.446G>A
  hgvsp: ENSP00000385130.3:p.Gly149Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.566G>A
  hgvsp: ENSP00000411770.2:p.Gly189Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.692G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.374G>A
  hgvsp: ENSP00000384882.1:p.Gly125Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.524G>A
  hgvsp: ENSP00000339168.4:p.Gly175Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.374G>A
  hgvsp: ENSP00000385653.1:p.Gly125Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.302G>A
  hgvsp: ENSP00000385827.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.515G>A
  hgvsp: ENSP00000236693.7:p.Gly172Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*366G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.452G>A
  hgvsp: ENSP00000371494.2:p.Gly151Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.620G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly189Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ

2-3691419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691419
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691419
    reference: chr 2
allele count: 2
allele frequency: 1.670927531872943e-5
allele num: 119694
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.569C>T
  hgvsp: ENSP00000411770.2:p.Thr190Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.527C>T
  hgvsp: ENSP00000339168.4:p.Thr176Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.623C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.449C>T
  hgvsp: ENSP00000385130.3:p.Thr150Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.518C>T
  hgvsp: ENSP00000236693.7:p.Thr173Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.455C>T
  hgvsp: ENSP00000371494.2:p.Thr152Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.377C>T
  hgvsp: ENSP00000385653.1:p.Thr126Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.305C>T
  hgvsp: ENSP00000385827.1:p.Thr102Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.377C>T
  hgvsp: ENSP00000384882.1:p.Thr126Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*369C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.695C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr190Met
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

2-3691420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691420
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691420
    reference: chr 2
allele count: 1
allele frequency: 8.357290900581667e-6
allele num: 119656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.624G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.378G>A
  hgvsp: ENST00000402794.1:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.528G>A
  hgvsp: ENST00000349077.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.456G>A
  hgvsp: ENST00000382062.2:c.456G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.306G>A
  hgvsp: ENST00000404205.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.450G>A
  hgvsp: ENST00000403096.3:c.450G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.570G>A
  hgvsp: ENST00000418971.2:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.519G>A
  hgvsp: ENST00000236693.7:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.378G>A
  hgvsp: ENST00000402922.1:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*370G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.696G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr190Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-3691434-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691434
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691434
    reference: chr 2
allele count: 1
allele frequency: 8.351288603831571e-6
allele num: 119742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.533A>C
  hgvsp: ENSP00000236693.7:p.Lys178Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.464A>C
  hgvsp: ENSP00000385130.3:p.Lys155Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.392A>C
  hgvsp: ENSP00000384882.1:p.Lys131Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.584A>C
  hgvsp: ENSP00000411770.2:p.Lys195Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.638A>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.320A>C
  hgvsp: ENSP00000385827.1:p.Lys107Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.470A>C
  hgvsp: ENSP00000371494.2:p.Lys157Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.392A>C
  hgvsp: ENSP00000385653.1:p.Lys131Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.542A>C
  hgvsp: ENSP00000339168.4:p.Lys181Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.710A>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*384A>C
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys195Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

2-3691434-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691434
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691434
    reference: chr 2
allele count: 1
allele frequency: 8.351288603831571e-6
allele num: 119742
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.470A>G
  hgvsp: ENSP00000371494.2:p.Lys157Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.392A>G
  hgvsp: ENSP00000385653.1:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.584A>G
  hgvsp: ENSP00000411770.2:p.Lys195Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.392A>G
  hgvsp: ENSP00000384882.1:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.464A>G
  hgvsp: ENSP00000385130.3:p.Lys155Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.710A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*384A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.542A>G
  hgvsp: ENSP00000339168.4:p.Lys181Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.638A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.320A>G
  hgvsp: ENSP00000385827.1:p.Lys107Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.533A>G
  hgvsp: ENSP00000236693.7:p.Lys178Arg
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys195Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

2-3691438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691438
    reference: chr 2
allele count: 3
allele frequency: 2.505721397190251e-5
allele num: 119726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.468C>T
  hgvsp: ENST00000403096.3:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.396C>T
  hgvsp: ENST00000402922.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.324C>T
  hgvsp: ENST00000404205.1:c.324C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*388C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.396C>T
  hgvsp: ENST00000402794.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.642C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.714C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.537C>T
  hgvsp: ENST00000236693.7:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.474C>T
  hgvsp: ENST00000382062.2:c.474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.588C>T
  hgvsp: ENST00000418971.2:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.546C>T
  hgvsp: ENST00000349077.4:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2284
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp196Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

2-3691456-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691456
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691456
    reference: chr 2
allele count: 1
allele frequency: 8.325424180361989e-6
allele num: 120114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.564G>C
  hgvsp: ENST00000349077.4:c.564G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.342G>C
  hgvsp: ENST00000404205.1:c.342G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.486G>C
  hgvsp: ENST00000403096.3:c.486G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.414G>C
  hgvsp: ENST00000402922.1:c.414G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.414G>C
  hgvsp: ENST00000402794.1:c.414G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*406G>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.492G>C
  hgvsp: ENST00000382062.2:c.492G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.606G>C
  hgvsp: ENST00000418971.2:c.606G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.660G>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.555G>C
  hgvsp: ENST00000236693.7:c.555G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.732G>C
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu202Leu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

2-3691465-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691465
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691465
    reference: chr 2
allele count: 1
allele frequency: 8.315178526882972e-6
allele num: 120262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.741A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.501A>G
  hgvsp: ENST00000382062.2:c.501A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.351A>G
  hgvsp: ENST00000404205.1:c.351A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.564A>G
  hgvsp: ENST00000236693.7:c.564A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.573A>G
  hgvsp: ENST00000349077.4:c.573A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.423A>G
  hgvsp: ENST00000402922.1:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.495A>G
  hgvsp: ENST00000403096.3:c.495A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*415A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.423A>G
  hgvsp: ENST00000402794.1:c.423A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.669A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.615A>G
  hgvsp: ENST00000418971.2:c.615A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala205Ala
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

2-3691465-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691465
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691465
    reference: chr 2
allele count: 1
allele frequency: 8.315178526882972e-6
allele num: 120262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.495A>T
  hgvsp: ENST00000403096.3:c.495A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.423A>T
  hgvsp: ENST00000402922.1:c.423A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.501A>T
  hgvsp: ENST00000382062.2:c.501A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.351A>T
  hgvsp: ENST00000404205.1:c.351A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.669A>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*415A>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.423A>T
  hgvsp: ENST00000402794.1:c.423A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.564A>T
  hgvsp: ENST00000236693.7:c.564A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.573A>T
  hgvsp: ENST00000349077.4:c.573A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.741A>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.615A>T
  hgvsp: ENST00000418971.2:c.615A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala205Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

2-3691468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691468
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691468
    reference: chr 2
allele count: 26
allele frequency: 2.161622879946791e-4
allele num: 120280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*418C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.504C>T
  hgvsp: ENST00000382062.2:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.744C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.618C>T
  hgvsp: ENST00000418971.2:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.576C>T
  hgvsp: ENST00000349077.4:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.354C>T
  hgvsp: ENST00000404205.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.426C>T
  hgvsp: ENST00000402922.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.426C>T
  hgvsp: ENST00000402794.1:c.426C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.567C>T
  hgvsp: ENST00000236693.7:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.498C>T
  hgvsp: ENST00000403096.3:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.672C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29164
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10243
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Tyr206Tyr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-3691472-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691472
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691472
    reference: chr 2
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.430G>A
  hgvsp: ENSP00000384882.1:p.Ala144Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.358G>A
  hgvsp: ENSP00000385827.1:p.Ala120Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.622G>A
  hgvsp: ENSP00000411770.2:p.Ala208Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.502G>A
  hgvsp: ENSP00000385130.3:p.Ala168Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.508G>A
  hgvsp: ENSP00000371494.2:p.Ala170Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.580G>A
  hgvsp: ENSP00000339168.4:p.Ala194Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*422G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.571G>A
  hgvsp: ENSP00000236693.7:p.Ala191Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.748G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.430G>A
  hgvsp: ENSP00000385653.1:p.Ala144Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.676G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala208Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff

2-3691473-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691473
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691473
    reference: chr 2
allele count: 37
allele frequency: 3.07508186366583e-4
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.431C>T
  hgvsp: ENSP00000385653.1:p.Ala144Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.359C>T
  hgvsp: ENSP00000385827.1:p.Ala120Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.509C>T
  hgvsp: ENSP00000371494.2:p.Ala170Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.503C>T
  hgvsp: ENSP00000385130.3:p.Ala168Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.623C>T
  hgvsp: ENSP00000411770.2:p.Ala208Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.572C>T
  hgvsp: ENSP00000236693.7:p.Ala191Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.431C>T
  hgvsp: ENSP00000384882.1:p.Ala144Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.749C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.581C>T
  hgvsp: ENSP00000339168.4:p.Ala194Val
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*423C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.677C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10226
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29224
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ala208Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

2-3691475-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691475
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691475
    reference: chr 2
allele count: 2
allele frequency: 1.661460756296936e-5
allele num: 120376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.361C>G
  hgvsp: ENSP00000385827.1:p.Gln121Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.433C>G
  hgvsp: ENSP00000384882.1:p.Gln145Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.505C>G
  hgvsp: ENSP00000385130.3:p.Gln169Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.679C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.433C>G
  hgvsp: ENSP00000385653.1:p.Gln145Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*425C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.511C>G
  hgvsp: ENSP00000371494.2:p.Gln171Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.583C>G
  hgvsp: ENSP00000339168.4:p.Gln195Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.625C>G
  hgvsp: ENSP00000411770.2:p.Gln209Glu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.751C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.574C>G
  hgvsp: ENSP00000236693.7:p.Gln192Glu
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln209Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-3691480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691480
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691480
    reference: chr 2
allele count: 10
allele frequency: 8.302751531857658e-5
allele num: 120442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.366C>T
  hgvsp: ENST00000404205.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.438C>T
  hgvsp: ENST00000402922.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.579C>T
  hgvsp: ENST00000236693.7:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.516C>T
  hgvsp: ENST00000382062.2:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.510C>T
  hgvsp: ENST00000403096.3:c.510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.684C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.756C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.630C>T
  hgvsp: ENST00000418971.2:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.438C>T
  hgvsp: ENST00000402794.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*430C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.588C>T
  hgvsp: ENST00000349077.4:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12620
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala210Ala
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

2-3691481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691481
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691481
    reference: chr 2
allele count: 5
allele frequency: 4.150479795464356e-5
allele num: 120468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*431G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.367G>A
  hgvsp: ENSP00000385827.1:p.Gly123Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.580G>A
  hgvsp: ENSP00000236693.7:p.Gly194Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.517G>A
  hgvsp: ENSP00000371494.2:p.Gly173Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.631G>A
  hgvsp: ENSP00000411770.2:p.Gly211Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.439G>A
  hgvsp: ENSP00000384882.1:p.Gly147Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.685G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.589G>A
  hgvsp: ENSP00000339168.4:p.Gly197Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.511G>A
  hgvsp: ENSP00000385130.3:p.Gly171Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.757G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.439G>A
  hgvsp: ENSP00000385653.1:p.Gly147Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Gly211Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

2-3691501-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691501
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691501
    reference: chr 2
allele count: 10
allele frequency: 8.282122210995345e-5
allele num: 120742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.459C>T
  hgvsp: ENST00000402794.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.531C>T
  hgvsp: ENST00000403096.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.537C>T
  hgvsp: ENST00000382062.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.600C>T
  hgvsp: ENST00000236693.7:c.600C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.777C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*451C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.651C>T
  hgvsp: ENST00000418971.2:c.651C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.387C>T
  hgvsp: ENST00000404205.1:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.705C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.609C>T
  hgvsp: ENST00000349077.4:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.459C>T
  hgvsp: ENST00000402922.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile217Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

2-3691502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691502
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691502
    reference: chr 2
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.610G>A
  hgvsp: ENSP00000339168.4:p.Gly204Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*452G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.538G>A
  hgvsp: ENSP00000371494.2:p.Gly180Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.706G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.652G>A
  hgvsp: ENSP00000411770.2:p.Gly218Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.778G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.532G>A
  hgvsp: ENSP00000385130.3:p.Gly178Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.460G>A
  hgvsp: ENSP00000385653.1:p.Gly154Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.460G>A
  hgvsp: ENSP00000384882.1:p.Gly154Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.601G>A
  hgvsp: ENSP00000236693.7:p.Gly201Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.388G>A
  hgvsp: ENSP00000385827.1:p.Gly130Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly218Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-3691510-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691510
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691510
    reference: chr 2
allele count: 2
allele frequency: 1.654861984510492e-5
allele num: 120856
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.660C>T
  hgvsp: ENST00000418971.2:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.546C>T
  hgvsp: ENST00000382062.2:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.714C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.618C>T
  hgvsp: ENST00000349077.4:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.609C>T
  hgvsp: ENST00000236693.7:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.468C>T
  hgvsp: ENST00000402794.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.786C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.396C>T
  hgvsp: ENST00000404205.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.468C>T
  hgvsp: ENST00000402922.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.540C>T
  hgvsp: ENST00000403096.3:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*460C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn220Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

2-3691516-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691516
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691514
    reference: chr 2
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.477_478delGA
  hgvsp: ENSP00000384882.1:p.Lys160GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.555_556delGA
  hgvsp: ENSP00000371494.2:p.Lys186GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.549_550delGA
  hgvsp: ENSP00000385130.3:p.Lys184GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.669_670delGA
  hgvsp: ENSP00000411770.2:p.Lys224GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.405_406delGA
  hgvsp: ENSP00000385827.1:p.Lys136GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.618_619delGA
  hgvsp: ENSP00000236693.7:p.Lys207GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*469_*470delGA
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.477_478delGA
  hgvsp: ENSP00000385653.1:p.Lys160GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.723_724delGA
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.795_796delGA
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.627_628delGA
  hgvsp: ENSP00000339168.4:p.Lys210GlyfsTer8
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys224GlyfsTer8
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GGA
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

2-3691526-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691526
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691526
    reference: chr 2
allele count: 1
allele frequency: 8.264326209484141e-6
allele num: 121002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.556G>A
  hgvsp: ENSP00000385130.3:p.Gly186Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.634G>A
  hgvsp: ENSP00000339168.4:p.Gly212Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.484G>A
  hgvsp: ENSP00000385653.1:p.Gly162Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.412G>A
  hgvsp: ENSP00000385827.1:p.Gly138Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.730G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.676G>A
  hgvsp: ENSP00000411770.2:p.Gly226Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.484G>A
  hgvsp: ENSP00000384882.1:p.Gly162Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.802G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*476G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.562G>A
  hgvsp: ENSP00000371494.2:p.Gly188Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.625G>A
  hgvsp: ENSP00000236693.7:p.Gly209Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly226Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

2-3691528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691528
    reference: chr 2
allele count: 5
allele frequency: 4.132777887985188e-5
allele num: 120984
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.678C>T
  hgvsp: ENST00000418971.2:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.564C>T
  hgvsp: ENST00000382062.2:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.558C>T
  hgvsp: ENST00000403096.3:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*478C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.414C>T
  hgvsp: ENST00000404205.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.804C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.636C>T
  hgvsp: ENST00000349077.4:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.486C>T
  hgvsp: ENST00000402794.1:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.486C>T
  hgvsp: ENST00000402922.1:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.627C>T
  hgvsp: ENST00000236693.7:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.732C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10393
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly226Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

2-3691529-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691529
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691529
    reference: chr 2
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.415G>A
  hgvsp: ENSP00000385827.1:p.Ala139Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.487G>A
  hgvsp: ENSP00000385653.1:p.Ala163Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.637G>A
  hgvsp: ENSP00000339168.4:p.Ala213Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.733G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.487G>A
  hgvsp: ENSP00000384882.1:p.Ala163Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.628G>A
  hgvsp: ENSP00000236693.7:p.Ala210Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*479G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.565G>A
  hgvsp: ENSP00000371494.2:p.Ala189Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.559G>A
  hgvsp: ENSP00000385130.3:p.Ala187Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.805G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.679G>A
  hgvsp: ENSP00000411770.2:p.Ala227Thr
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala227Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-3691531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691531
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691531
    reference: chr 2
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.807C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.561C>T
  hgvsp: ENST00000403096.3:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.681C>T
  hgvsp: ENST00000418971.2:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.417C>T
  hgvsp: ENST00000404205.1:c.417C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.567C>T
  hgvsp: ENST00000382062.2:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.639C>T
  hgvsp: ENST00000349077.4:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*481C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.630C>T
  hgvsp: ENST00000236693.7:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.489C>T
  hgvsp: ENST00000402794.1:c.489C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.489C>T
  hgvsp: ENST00000402922.1:c.489C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.735C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala227Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-3691534-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691534
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691534
    reference: chr 2
allele count: 4
allele frequency: 3.30436506625252e-5
allele num: 121052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.810C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.420C>T
  hgvsp: ENST00000404205.1:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.564C>T
  hgvsp: ENST00000403096.3:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*484C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.633C>T
  hgvsp: ENST00000236693.7:c.633C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.570C>T
  hgvsp: ENST00000382062.2:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.642C>T
  hgvsp: ENST00000349077.4:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.492C>T
  hgvsp: ENST00000402922.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.492C>T
  hgvsp: ENST00000402794.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.738C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.684C>T
  hgvsp: ENST00000418971.2:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe228Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

2-3691535-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691535
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691535
    reference: chr 2
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.571G>A
  hgvsp: ENSP00000371494.2:p.Val191Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.565G>A
  hgvsp: ENSP00000385130.3:p.Val189Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.811G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.634G>A
  hgvsp: ENSP00000236693.7:p.Val212Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.493G>A
  hgvsp: ENSP00000384882.1:p.Val165Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.643G>A
  hgvsp: ENSP00000339168.4:p.Val215Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.739G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.493G>A
  hgvsp: ENSP00000385653.1:p.Val165Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*485G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.421G>A
  hgvsp: ENSP00000385827.1:p.Val141Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.685G>A
  hgvsp: ENSP00000411770.2:p.Val229Met
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13111
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val229Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-3691539-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691539
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691539
    reference: chr 2
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*489A>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.497A>C
  hgvsp: ENSP00000384882.1:p.Tyr166Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.497A>C
  hgvsp: ENSP00000385653.1:p.Tyr166Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.743A>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.815A>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.575A>C
  hgvsp: ENSP00000371494.2:p.Tyr192Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.647A>C
  hgvsp: ENSP00000339168.4:p.Tyr216Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.638A>C
  hgvsp: ENSP00000236693.7:p.Tyr213Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.689A>C
  hgvsp: ENSP00000411770.2:p.Tyr230Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.425A>C
  hgvsp: ENSP00000385827.1:p.Tyr142Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.569A>C
  hgvsp: ENSP00000385130.3:p.Tyr190Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr230Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

2-3691547-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691547
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691547
    reference: chr 2
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.697C>T
  hgvsp: ENSP00000411770.2:p.His233Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.646C>T
  hgvsp: ENSP00000236693.7:p.His216Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.583C>T
  hgvsp: ENSP00000371494.2:p.His195Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.577C>T
  hgvsp: ENSP00000385130.3:p.His193Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.505C>T
  hgvsp: ENSP00000385653.1:p.His169Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.433C>T
  hgvsp: ENSP00000385827.1:p.His145Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.655C>T
  hgvsp: ENSP00000339168.4:p.His219Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.823C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.505C>T
  hgvsp: ENSP00000384882.1:p.His169Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.751C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10430
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His233Tyr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

2-3691548-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691548
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691548
    reference: chr 2
allele count: 11951
allele frequency: 9.864142097791277e-2
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.647A>G
  hgvsp: ENSP00000236693.7:p.His216Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.656A>G
  hgvsp: ENSP00000339168.4:p.His219Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.584A>G
  hgvsp: ENSP00000371494.2:p.His195Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.506A>G
  hgvsp: ENSP00000385653.1:p.His169Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.434A>G
  hgvsp: ENSP00000385827.1:p.His145Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.578A>G
  hgvsp: ENSP00000385130.3:p.His193Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*498A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.752A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.698A>G
  hgvsp: ENSP00000411770.2:p.His233Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.506A>G
  hgvsp: ENSP00000384882.1:p.His169Arg
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.824A>G
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12165
  bin: 2.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.75e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.25e1
  variant carriers: 660
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 5.25e1
  variant carriers: 668
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 672
genotype depth: GenotypeDepth
  all individuals: 28696
  bin: 2.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9179
  bin: 3.25e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.25e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 9.75e1
  variant carriers: 2317
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 675
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.75e1
  variant carriers: 593
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 660
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 3.75e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 8.25e1
  variant carriers: 496
genotype quality: GenotypeQuality
hgvs: p.His233Arg
num of homozygotes: 2588
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

2-3691550-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691550
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691550
    reference: chr 2
allele count: 4
allele frequency: 3.300983693140556e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.586T>A
  hgvsp: ENSP00000371494.2:p.Ser196Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.508T>A
  hgvsp: ENSP00000384882.1:p.Ser170Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.508T>A
  hgvsp: ENSP00000385653.1:p.Ser170Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.826T>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.649T>A
  hgvsp: ENSP00000236693.7:p.Ser217Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.436T>A
  hgvsp: ENSP00000385827.1:p.Ser146Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.658T>A
  hgvsp: ENSP00000339168.4:p.Ser220Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.700T>A
  hgvsp: ENSP00000411770.2:p.Ser234Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.580T>A
  hgvsp: ENSP00000385130.3:p.Ser194Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.754T>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*500T>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser234Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

2-3691551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691551
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691551
    reference: chr 2
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.701C>T
  hgvsp: ENSP00000411770.2:p.Ser234Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.437C>T
  hgvsp: ENSP00000385827.1:p.Ser146Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.587C>T
  hgvsp: ENSP00000371494.2:p.Ser196Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*501C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.581C>T
  hgvsp: ENSP00000385130.3:p.Ser194Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.509C>T
  hgvsp: ENSP00000385653.1:p.Ser170Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.509C>T
  hgvsp: ENSP00000384882.1:p.Ser170Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.650C>T
  hgvsp: ENSP00000236693.7:p.Ser217Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.659C>T
  hgvsp: ENSP00000339168.4:p.Ser220Phe
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.755C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.827C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser234Phe
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-3691555-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.705C>A
  hgvsp: ENST00000418971.2:c.705C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.663C>A
  hgvsp: ENST00000349077.4:c.663C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.654C>A
  hgvsp: ENST00000236693.7:c.654C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.441C>A
  hgvsp: ENST00000404205.1:c.441C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.513C>A
  hgvsp: ENST00000402922.1:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*505C>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.759C>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.513C>A
  hgvsp: ENST00000402794.1:c.513C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.591C>A
  hgvsp: ENST00000382062.2:c.591C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.585C>A
  hgvsp: ENST00000403096.3:c.585C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.831C>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33431
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro235Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

2-3691555-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.705C>G
  hgvsp: ENST00000418971.2:c.705C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.513C>G
  hgvsp: ENST00000402794.1:c.513C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.591C>G
  hgvsp: ENST00000382062.2:c.591C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.441C>G
  hgvsp: ENST00000404205.1:c.441C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.654C>G
  hgvsp: ENST00000236693.7:c.654C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.585C>G
  hgvsp: ENST00000403096.3:c.585C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.513C>G
  hgvsp: ENST00000402922.1:c.513C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.759C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*505C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.663C>G
  hgvsp: ENST00000349077.4:c.663C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.831C>G
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro235Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-3691555-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691555
    reference: chr 2
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.831C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.705C>T
  hgvsp: ENST00000418971.2:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.513C>T
  hgvsp: ENST00000402794.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.585C>T
  hgvsp: ENST00000403096.3:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*505C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.654C>T
  hgvsp: ENST00000236693.7:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.591C>T
  hgvsp: ENST00000382062.2:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.441C>T
  hgvsp: ENST00000404205.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.513C>T
  hgvsp: ENST00000402922.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.663C>T
  hgvsp: ENST00000349077.4:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.759C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro235Pro
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

2-3691557-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691557
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691557
    reference: chr 2
allele count: 2
allele frequency: 1.650464605786529e-5
allele num: 121178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.515T>C
  hgvsp: ENSP00000385653.1:p.Met172Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.656T>C
  hgvsp: ENSP00000236693.7:p.Met219Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.761T>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.833T>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*507T>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.443T>C
  hgvsp: ENSP00000385827.1:p.Met148Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.593T>C
  hgvsp: ENSP00000371494.2:p.Met198Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.587T>C
  hgvsp: ENSP00000385130.3:p.Met196Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.665T>C
  hgvsp: ENSP00000339168.4:p.Met222Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.515T>C
  hgvsp: ENSP00000384882.1:p.Met172Thr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.707T>C
  hgvsp: ENSP00000411770.2:p.Met236Thr
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met236Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

2-3691561-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691561
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691561
    reference: chr 2
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.711G>T
  hgvsp: ENST00000418971.2:c.711G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.660G>T
  hgvsp: ENST00000236693.7:c.660G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.597G>T
  hgvsp: ENST00000382062.2:c.597G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*511G>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.447G>T
  hgvsp: ENST00000404205.1:c.447G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.765G>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.591G>T
  hgvsp: ENST00000403096.3:c.591G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.519G>T
  hgvsp: ENST00000402922.1:c.519G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.669G>T
  hgvsp: ENST00000349077.4:c.669G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.519G>T
  hgvsp: ENST00000402794.1:c.519G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.837G>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg237Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

2-3691577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691577
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691577
    reference: chr 2
allele count: 2
allele frequency: 1.651200422707308e-5
allele num: 121124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.535C>T
  hgvsp: ENSP00000385653.1:p.Arg179Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.853C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.535C>T
  hgvsp: ENSP00000384882.1:p.Arg179Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.463C>T
  hgvsp: ENSP00000385827.1:p.Arg155Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.727C>T
  hgvsp: ENSP00000411770.2:p.Arg243Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.781C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.613C>T
  hgvsp: ENSP00000371494.2:p.Arg205Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.607C>T
  hgvsp: ENSP00000385130.3:p.Arg203Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.685C>T
  hgvsp: ENSP00000339168.4:p.Arg229Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.676C>T
  hgvsp: ENSP00000236693.7:p.Arg226Cys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*527C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg243Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

2-3691578-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691578
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691578
    reference: chr 2
allele count: 4
allele frequency: 3.302400845414616e-5
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.728G>A
  hgvsp: ENSP00000411770.2:p.Arg243His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.608G>A
  hgvsp: ENSP00000385130.3:p.Arg203His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.782G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.536G>A
  hgvsp: ENSP00000385653.1:p.Arg179His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.854G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.677G>A
  hgvsp: ENSP00000236693.7:p.Arg226His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.536G>A
  hgvsp: ENSP00000384882.1:p.Arg179His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.686G>A
  hgvsp: ENSP00000339168.4:p.Arg229His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.614G>A
  hgvsp: ENSP00000371494.2:p.Arg205His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.464G>A
  hgvsp: ENSP00000385827.1:p.Arg155His
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*528G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg243His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

2-3691580-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691580
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691580
    reference: chr 2
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.856A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*530A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.616A>G
  hgvsp: ENSP00000371494.2:p.Ser206Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.538A>G
  hgvsp: ENSP00000385653.1:p.Ser180Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.610A>G
  hgvsp: ENSP00000385130.3:p.Ser204Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.538A>G
  hgvsp: ENSP00000384882.1:p.Ser180Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.688A>G
  hgvsp: ENSP00000339168.4:p.Ser230Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.679A>G
  hgvsp: ENSP00000236693.7:p.Ser227Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.466A>G
  hgvsp: ENSP00000385827.1:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.784A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.730A>G
  hgvsp: ENSP00000411770.2:p.Ser244Gly
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser244Gly
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

2-3691582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691582
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691582
    reference: chr 2
allele count: 6
allele frequency: 4.954173891503591e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.732C>T
  hgvsp: ENST00000418971.2:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.681C>T
  hgvsp: ENST00000236693.7:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.858C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*532C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.618C>T
  hgvsp: ENST00000382062.2:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.612C>T
  hgvsp: ENST00000403096.3:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.786C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.690C>T
  hgvsp: ENST00000349077.4:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.540C>T
  hgvsp: ENST00000402922.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.468C>T
  hgvsp: ENST00000404205.1:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.540C>T
  hgvsp: ENST00000402794.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13789
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser244Ser
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum

2-3691583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691583
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691583
    reference: chr 2
allele count: 3
allele frequency: 2.477373323644051e-5
allele num: 121096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.859G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.619G>A
  hgvsp: ENSP00000371494.2:p.Gly207Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.613G>A
  hgvsp: ENSP00000385130.3:p.Gly205Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.682G>A
  hgvsp: ENSP00000236693.7:p.Gly228Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.787G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.691G>A
  hgvsp: ENSP00000339168.4:p.Gly231Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.541G>A
  hgvsp: ENSP00000384882.1:p.Gly181Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.469G>A
  hgvsp: ENSP00000385827.1:p.Gly157Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.541G>A
  hgvsp: ENSP00000385653.1:p.Gly181Ser
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*533G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.733G>A
  hgvsp: ENSP00000411770.2:p.Gly245Ser
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10864
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly245Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

2-3691594-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691594
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691594
    reference: chr 2
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.624C>G
  hgvsp: ENSP00000385130.3:p.Asn208Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.744C>G
  hgvsp: ENSP00000411770.2:p.Asn248Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.552C>G
  hgvsp: ENSP00000384882.1:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.552C>G
  hgvsp: ENSP00000385653.1:p.Asn184Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.480C>G
  hgvsp: ENSP00000385827.1:p.Asn160Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.693C>G
  hgvsp: ENSP00000236693.7:p.Asn231Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.630C>G
  hgvsp: ENSP00000371494.2:p.Asn210Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.702C>G
  hgvsp: ENSP00000339168.4:p.Asn234Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.798C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.870C>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*544C>G
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn248Lys
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

2-3691595-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691595
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691595
    reference: chr 2
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.553A>G
  hgvsp: ENSP00000385653.1:p.Asn185Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.745A>G
  hgvsp: ENSP00000411770.2:p.Asn249Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.625A>G
  hgvsp: ENSP00000385130.3:p.Asn209Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.631A>G
  hgvsp: ENSP00000371494.2:p.Asn211Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.871A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.481A>G
  hgvsp: ENSP00000385827.1:p.Asn161Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.553A>G
  hgvsp: ENSP00000384882.1:p.Asn185Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*545A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.799A>G
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.694A>G
  hgvsp: ENSP00000236693.7:p.Asn232Asp
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.703A>G
  hgvsp: ENSP00000339168.4:p.Asn235Asp
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn249Asp
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

2-3691597-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691597
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691597
    reference: chr 2
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.705T>A
  hgvsp: ENSP00000339168.4:p.Asn235Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.555T>A
  hgvsp: ENSP00000384882.1:p.Asn185Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.633T>A
  hgvsp: ENSP00000371494.2:p.Asn211Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.483T>A
  hgvsp: ENSP00000385827.1:p.Asn161Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.555T>A
  hgvsp: ENSP00000385653.1:p.Asn185Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.627T>A
  hgvsp: ENSP00000385130.3:p.Asn209Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.696T>A
  hgvsp: ENSP00000236693.7:p.Asn232Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.801T>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.873T>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.747T>A
  hgvsp: ENSP00000411770.2:p.Asn249Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*547T>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn249Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

2-3691597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691597
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691597
    reference: chr 2
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.801T>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.705T>C
  hgvsp: ENST00000349077.4:c.705T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.555T>C
  hgvsp: ENST00000402794.1:c.555T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.483T>C
  hgvsp: ENST00000404205.1:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.555T>C
  hgvsp: ENST00000402922.1:c.555T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.747T>C
  hgvsp: ENST00000418971.2:c.747T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.873T>C
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.627T>C
  hgvsp: ENST00000403096.3:c.627T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.633T>C
  hgvsp: ENST00000382062.2:c.633T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.696T>C
  hgvsp: ENST00000236693.7:c.696T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*547T>C
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn249Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

2-3691600-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691600
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691600
    reference: chr 2
allele count: 1
allele frequency: 8.265282507356101e-6
allele num: 120988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.699C>T
  hgvsp: ENST00000236693.7:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.636C>T
  hgvsp: ENST00000382062.2:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.486C>T
  hgvsp: ENST00000404205.1:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.876C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.708C>T
  hgvsp: ENST00000349077.4:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.630C>T
  hgvsp: ENST00000403096.3:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.558C>T
  hgvsp: ENST00000402922.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.750C>T
  hgvsp: ENST00000418971.2:c.750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.804C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.558C>T
  hgvsp: ENST00000402794.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*550C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10837
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13651
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala250Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

2-3691606-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691606
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691606
    reference: chr 2
allele count: 5
allele frequency: 4.134828487314346e-5
allele num: 120924
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.810C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.714C>T
  hgvsp: ENST00000349077.4:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.564C>T
  hgvsp: ENST00000402922.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.756C>T
  hgvsp: ENST00000418971.2:c.756C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.705C>T
  hgvsp: ENST00000236693.7:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.882C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*556C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.564C>T
  hgvsp: ENST00000402794.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.636C>T
  hgvsp: ENST00000403096.3:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.642C>T
  hgvsp: ENST00000382062.2:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.492C>T
  hgvsp: ENST00000404205.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Asp252Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

2-3691607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691607
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691607
    reference: chr 2
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.643G>A
  hgvsp: ENSP00000371494.2:p.Glu215Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.757G>A
  hgvsp: ENSP00000411770.2:p.Glu253Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.715G>A
  hgvsp: ENSP00000339168.4:p.Glu239Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.811G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.493G>A
  hgvsp: ENSP00000385827.1:p.Glu165Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.565G>A
  hgvsp: ENSP00000384882.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.565G>A
  hgvsp: ENSP00000385653.1:p.Glu189Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.637G>A
  hgvsp: ENSP00000385130.3:p.Glu213Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.883G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.706G>A
  hgvsp: ENSP00000236693.7:p.Glu236Lys
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*557G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu253Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

2-3691617-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691617
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691617
    reference: chr 2
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.647G>A
  hgvsp: ENSP00000385130.3:p.Cys216Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.767G>A
  hgvsp: ENSP00000411770.2:p.Cys256Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.821G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.575G>A
  hgvsp: ENSP00000384882.1:p.Cys192Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.653G>A
  hgvsp: ENSP00000371494.2:p.Cys218Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.725G>A
  hgvsp: ENSP00000339168.4:p.Cys242Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.716G>A
  hgvsp: ENSP00000236693.7:p.Cys239Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.893G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*567G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.503G>A
  hgvsp: ENSP00000385827.1:p.Cys168Tyr
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.575G>A
  hgvsp: ENSP00000385653.1:p.Cys192Tyr
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys256Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

2-3691618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691618
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691618
    reference: chr 2
allele count: 6
allele frequency: 4.967709885742673e-5
allele num: 120780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.576C>T
  hgvsp: ENST00000402922.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.654C>T
  hgvsp: ENST00000382062.2:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.648C>T
  hgvsp: ENST00000403096.3:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.894C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.717C>T
  hgvsp: ENST00000236693.7:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.726C>T
  hgvsp: ENST00000349077.4:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.822C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.504C>T
  hgvsp: ENST00000404205.1:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.768C>T
  hgvsp: ENST00000418971.2:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*568C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.576C>T
  hgvsp: ENST00000402794.1:c.576C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys256Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

2-3691628-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691628
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691628
    reference: chr 2
allele count: 1
allele frequency: 8.29324929507381e-6
allele num: 120580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.904G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.586G>A
  hgvsp: ENSP00000384882.1:p.Val196Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.664G>A
  hgvsp: ENSP00000371494.2:p.Val222Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.727G>A
  hgvsp: ENSP00000236693.7:p.Val243Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.778G>A
  hgvsp: ENSP00000411770.2:p.Val260Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.736G>A
  hgvsp: ENSP00000339168.4:p.Val246Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*578G>A
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.658G>A
  hgvsp: ENSP00000385130.3:p.Val220Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.586G>A
  hgvsp: ENSP00000385653.1:p.Val196Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.514G>A
  hgvsp: ENSP00000385827.1:p.Val172Met
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.832G>A
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val260Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum

2-3691635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3691635
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 3691635
    reference: chr 2
allele count: 3
allele frequency: 2.491115023084333e-5
allele num: 120428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000384882
  ensembl transcript: ENST00000402794
  gene symbol: COLEC11
  hgvsc: ENST00000402794.1:c.593C>T
  hgvsp: ENSP00000384882.1:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385653
  ensembl transcript: ENST00000402922
  gene symbol: COLEC11
  hgvsc: ENST00000402922.1:c.593C>T
  hgvsp: ENSP00000385653.1:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000236693
  ensembl transcript: ENST00000236693
  gene symbol: COLEC11
  hgvsc: ENST00000236693.7:c.734C>T
  hgvsp: ENSP00000236693.7:p.Ser245Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000410919
  ensembl transcript: ENST00000416132
  gene symbol: COLEC11
  hgvsc: ENST00000416132.1:c.*585C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000460971
  gene symbol: COLEC11
  hgvsc: ENST00000460971.1:n.839C>T
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000371494
  ensembl transcript: ENST00000382062
  gene symbol: COLEC11
  hgvsc: ENST00000382062.2:c.671C>T
  hgvsp: ENSP00000371494.2:p.Ser224Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385827
  ensembl transcript: ENST00000404205
  gene symbol: COLEC11
  hgvsc: ENST00000404205.1:c.521C>T
  hgvsp: ENSP00000385827.1:p.Ser174Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000411770
  ensembl transcript: ENST00000418971
  gene symbol: COLEC11
  hgvsc: ENST00000418971.2:c.785C>T
  hgvsp: ENSP00000411770.2:p.Ser262Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000339168
  ensembl transcript: ENST00000349077
  gene symbol: COLEC11
  hgvsc: ENST00000349077.4:c.743C>T
  hgvsp: ENSP00000339168.4:p.Ser248Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000118004
  ensembl protein: ENSP00000385130
  ensembl transcript: ENST00000403096
  gene symbol: COLEC11
  hgvsc: ENST00000403096.3:c.665C>T
  hgvsp: ENSP00000385130.3:p.Ser222Leu
  variant of: http://identifiers.org/hgnc/17213
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000118004
  ensembl transcript: ENST00000487365
  gene symbol: COLEC11
  hgvsc: ENST00000487365.1:n.911C>T
  variant of: http://identifiers.org/hgnc/17213
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser262Leu
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 1466
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4270
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.056201550387597e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65826
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 3.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

DP
type: SiteQuality
SIO_000300: 1.825492e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeDepth
all individuals: 1467
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40231
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.916e0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

DP
type: SiteQuality
SIO_000300: 1.824101e6

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeDepth
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40094
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7848
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65776
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.94e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 1.344e1

DP
type: SiteQuality
SIO_000300: 1.82279e6

MQRankSum
type: SiteQuality
SIO_000300: -6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e0

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

FS
type: SiteQuality
SIO_000300: 4.491e0

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 898
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7837
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

DP
type: SiteQuality
SIO_000300: 1.821697e6

MQ
type: SiteQuality
SIO_000300: 5.845e1

VQSLOD
type: SiteQuality
SIO_000300: -2.122e0

FS
type: SiteQuality
SIO_000300: 4.441e0

MQRankSum
type: SiteQuality
SIO_000300: 2.37e0

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.123e0

GenotypeDepth
all individuals: 102
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39739
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.801999607920016e-5
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.228e1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.819136e6

FS
type: SiteQuality
SIO_000300: 1.536e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

GenotypeDepth
all individuals: 69
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4253
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520820026158104e-5
allele num: 65754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.327205026762858e-4
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.7e0

FS
type: SiteQuality
SIO_000300: 1.536e0

DP
type: SiteQuality
SIO_000300: 1.819136e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7812
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52077376969402e-5
allele num: 65756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 1.149e0

QD
type: SiteQuality
SIO_000300: 1.144e1

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.351e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

DP
type: SiteQuality
SIO_000300: 1.81899e6

GenotypeDepth
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4245
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39529
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.816095e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.459e0

VQSLOD
type: SiteQuality
SIO_000300: -7.502e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 1.0547e1

QD
type: SiteQuality
SIO_000300: 1.41e1

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

GenotypeDepth
all individuals: 92
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39537
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 623
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.086056843770921e-5
allele num: 65724
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.733402669440111e-4
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.214e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

DP
type: SiteQuality
SIO_000300: 1.815224e6

GenotypeDepth
all individuals: 129
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7771
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39451
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 1137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 52
allele frequency: 3.150369562583303e-3
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73370319001387e-4
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

DP
type: SiteQuality
SIO_000300: 1.813807e6

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeDepth
all individuals: 379
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39451
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 2244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7771
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423361201987156e-4
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.467406380027739e-4
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.609886764884939e-5
allele num: 65704
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.851298190401259e-4
allele num: 10168
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.64e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

DP
type: SiteQuality
SIO_000300: 1.813807e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeDepth
all individuals: 99
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39057
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4169
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7647
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2217
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.047201145747631e-5
allele num: 65634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.579e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.536e0

MQ
type: SiteQuality
SIO_000300: 5.876e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.802283e6

QD
type: SiteQuality
SIO_000300: 1.338e1

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.294e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.304e-1

GenotypeDepth
all individuals: 66
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4177
bin: 9.75e1
variant carriers: 76

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7479
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38738
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.604166666666667e-4
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.189730439295418e-4
allele num: 65514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 2.363922899745424e-3
allele num: 16498
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

DP
type: SiteQuality
SIO_000300: 1.79607e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.149e0

QD
type: SiteQuality
SIO_000300: 1.38e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

GenotypeDepth
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.054927598215922e-5
allele num: 65468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.32e-1

DP
type: SiteQuality
SIO_000300: 1.789748e6

VQSLOD
type: SiteQuality
SIO_000300: -1.334e-1

QD
type: SiteQuality
SIO_000300: 7.52e0

GenotypeDepth
all individuals: 734
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38667
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527230520174715e-5
allele num: 65478
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.615e1

DP
type: SiteQuality
SIO_000300: 1.788972e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.194e0

MQRankSum
type: SiteQuality
SIO_000300: -6.76e-1

GenotypeDepth
all individuals: 790
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4094
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 234
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.983293556085919e-4
allele num: 10056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527463799107961e-5
allele num: 65468
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 4.206e0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.394e1

DP
type: SiteQuality
SIO_000300: 1.788725e6

GenotypeDepth
all individuals: 10400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39200
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 539
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526344709689236e-5
allele num: 65516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.124e0

FS
type: SiteQuality
SIO_000300: 8.611000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.789327e6

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeDepth
all individuals: 2397
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1079
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38861
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525692664469669e-5
allele num: 65544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.437e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.785212e6

VQSLOD
type: SiteQuality
SIO_000300: -9.416e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.425e1

FS
type: SiteQuality
SIO_000300: 7.052e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 363
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4070
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7385
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525646111128063e-5
allele num: 65546
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.403e1

DP
type: SiteQuality
SIO_000300: 1.784263e6

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

GenotypeDepth
all individuals: 361
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4062
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39061
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65518
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 1.783373e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.095e0

FS
type: SiteQuality
SIO_000300: 1.279e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.81e-1

QD
type: SiteQuality
SIO_000300: 1.078e1

GenotypeDepth
all individuals: 121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4034
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.69e0

QD
type: SiteQuality
SIO_000300: 1.204e1

DP
type: SiteQuality
SIO_000300: 1.776212e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeDepth
all individuals: 503
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4034
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 1.204e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 1.776212e6

GenotypeDepth
all individuals: 88
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4029
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 514
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818843215714805e-4
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65588
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 1.774945e6

QD
type: SiteQuality
SIO_000300: 1.52e1

GenotypeDepth
all individuals: 28973
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40322
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1020
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4005
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 300
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.327e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 3.824e0

VQSLOD
type: SiteQuality
SIO_000300: 9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.780463e6

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

GenotypeDepth
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7125
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3967
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516254245511887e-5
allele num: 65952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.202e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.780955e6

GenotypeDepth
all individuals: 164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7125
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3967
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 902
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40969
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65952
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.202e1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.780955e6

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

GenotypeDepth
all individuals: 96
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3980
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41168
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 19
allele frequency: 2.209302325581395e-3
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.24345295829292e-4
allele num: 16496
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.242e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

DP
type: SiteQuality
SIO_000300: 1.782172e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.08e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

GenotypeDepth
all individuals: 121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7064
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 540
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.318e0

DP
type: SiteQuality
SIO_000300: 1.782474e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -1.17e0

FS
type: SiteQuality
SIO_000300: 6.714e0

QD
type: SiteQuality
SIO_000300: 1.526e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeDepth
all individuals: 733
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3974
bin: 9.75e1
variant carriers: 37

GenotypeQuality
all individuals: 1818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.923107100823852e-4
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.69640043631075e-4
allele num: 66008
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.294e1

DP
type: SiteQuality
SIO_000300: 1.783287e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.12e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.453e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeDepth
all individuals: 732
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 769
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41403
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212268153715602e-4
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.783357e6

QD
type: SiteQuality
SIO_000300: 1.585e1

FS
type: SiteQuality
SIO_000300: 6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.068e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeDepth
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 41300
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7052
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.811435284903074e-4
allele num: 10214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

FS
type: SiteQuality
SIO_000300: 2.521e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.41e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

DP
type: SiteQuality
SIO_000300: 1.786391e6

GenotypeDepth
all individuals: 160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1932
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41657
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3934
bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

DP
type: SiteQuality
SIO_000300: 1.787604e6

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeDepth
all individuals: 96
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 945
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3942
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1933
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1838
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42306760358614e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508614187007815e-5
allele num: 66286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.636068613815484e-4
allele num: 8628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 1.796485e6

FS
type: SiteQuality
SIO_000300: 3.662e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.924e0

GenotypeDepth
all individuals: 738
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1936
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508477644361311e-5
allele num: 66292
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 2.115e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 1.796609e6

QD
type: SiteQuality
SIO_000300: 1.063e1

GenotypeDepth
all individuals: 1235
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42841
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7277
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013772942346524e-5
allele num: 66362
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.676e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.47e0

DP
type: SiteQuality
SIO_000300: 1.79914e6

QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeDepth
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3945
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7294
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505570611261668e-5
allele num: 66420
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.429e0

FS
type: SiteQuality
SIO_000300: 7.525e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

DP
type: SiteQuality
SIO_000300: 1.800632e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7304
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42975
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.701e0

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

DP
type: SiteQuality
SIO_000300: 1.802245e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.747e0

QD
type: SiteQuality
SIO_000300: 3.246e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.04e-1

GenotypeDepth
all individuals: 160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3952
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 247
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.909796314258002e-4
allele num: 10310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009691205682297e-5
allele num: 66452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

FS
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 1.802542e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.591e0

QD
type: SiteQuality
SIO_000300: 8.6e0

GenotypeDepth
all individuals: 726
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3950
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

FS
type: SiteQuality
SIO_000300: 8.64e-1

QD
type: SiteQuality
SIO_000300: 1.594e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.802679e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeDepth
all individuals: 501
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7313
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 988
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504166541319455e-5
allele num: 66482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

MQRankSum
type: SiteQuality
SIO_000300: 7.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 9.82e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 1.849e0

QD
type: SiteQuality
SIO_000300: 1.392e1

DP
type: SiteQuality
SIO_000300: 1.803244e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

GenotypeDepth
all individuals: 163
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 43093
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1965
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3954
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.631773969430292e-4
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: 3.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.247e0

MQRankSum
type: SiteQuality
SIO_000300: -1.112e0

QD
type: SiteQuality
SIO_000300: 1.104e1

DP
type: SiteQuality
SIO_000300: 1.803659e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.86e-1

GenotypeDepth
all individuals: 96
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43118
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7327
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.3e0

QD
type: SiteQuality
SIO_000300: 9.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.145e-1

DP
type: SiteQuality
SIO_000300: 1.803628e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

GenotypeDepth
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1883
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.248e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.159e1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

DP
type: SiteQuality
SIO_000300: 1.804142e6

GenotypeDepth
all individuals: 727
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43128
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7331
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.663703131039814e-5
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 1.804861e6

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.59e-1

FS
type: SiteQuality
SIO_000300: 9.9e0

QD
type: SiteQuality
SIO_000300: 1.069e1

GenotypeDepth
all individuals: 430
bin: 8.75e1
variant carriers: 419

GenotypeQuality
all individuals: 166
bin: 9.25e1
variant carriers: 53

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 14

GenotypeQuality
all individuals: 9438
bin: 9.75e1
variant carriers: 9070

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 41176
bin: 6.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1214
bin: 7.75e1
variant carriers: 32

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 17

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 11

GenotypeQuality
all individuals: 6351
bin: 6.75e1
variant carriers: 25

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 445
bin: 8.25e1
variant carriers: 45

GenotypeQuality
all individuals: 1395
bin: 7.25e1
variant carriers: 19

East Asian
type: Population
allele count: 152
allele frequency: 1.759666589488307e-2
allele num: 8638
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 2283
allele frequency: 3.430091048408906e-2
allele num: 66558
num of homozygotes: 46

African
type: Population
allele count: 7012
allele frequency: 6.764422149334363e-1
allele num: 10366
num of homozygotes: 2390

European (Finnish)
type: Population
allele count: 128
allele frequency: 1.935288781372846e-2
allele num: 6614
num of homozygotes: 1

Latino
type: Population
allele count: 502
allele frequency: 4.339557399723375e-2
allele num: 11568
num of homozygotes: 13

Other
type: Population
allele count: 72
allele frequency: 7.964601769911504e-2
allele num: 904
num of homozygotes: 5

South Asian
type: Population
allele count: 1802
allele frequency: 1.091591955415556e-1
allele num: 16508
num of homozygotes: 131

BaseQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.782e1

QD
type: SiteQuality
SIO_000300: 1.517e1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

FS
type: SiteQuality
SIO_000300: 5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.576e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

DP
type: SiteQuality
SIO_000300: 2.178763e6

GenotypeDepth
all individuals: 1304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 154
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7657
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.00943481265587e-5
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.309e0

FS
type: SiteQuality
SIO_000300: 2.574e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

DP
type: SiteQuality
SIO_000300: 1.660962e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

QD
type: SiteQuality
SIO_000300: 1.143e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeDepth
all individuals: 49
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48027
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.101e0

QD
type: SiteQuality
SIO_000300: 1.288e1

FS
type: SiteQuality
SIO_000300: 1.0193e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.199e0

DP
type: SiteQuality
SIO_000300: 1.660852e6

MQ
type: SiteQuality
SIO_000300: 5.918e1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.462e0

GenotypeDepth
all individuals: 54
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.660743e6

QD
type: SiteQuality
SIO_000300: 1.293e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 1.0257e1

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.073e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.985e-1

GenotypeDepth
all individuals: 45
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.073e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.985e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 1.0257e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

DP
type: SiteQuality
SIO_000300: 1.660743e6

GenotypeDepth
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.073e0

DP
type: SiteQuality
SIO_000300: 1.660743e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 1.293e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.0257e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.985e-1

GenotypeDepth
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1728
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2081e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.451e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.867e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.660485e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

GenotypeDepth
all individuals: 34
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48083
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.247e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 6.974e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

DP
type: SiteQuality
SIO_000300: 1.660522e6

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeDepth
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48012
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.451e0

FS
type: SiteQuality
SIO_000300: 2.111e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.125e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.77e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.65964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

GenotypeDepth
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47996
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.509786236132407e-5
allele num: 66522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

FS
type: SiteQuality
SIO_000300: 2.507e0

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 1.659477e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.061e1

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

FS
type: SiteQuality
SIO_000300: 2.612e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.603e0

DP
type: SiteQuality
SIO_000300: 1.659267e6

MQ
type: SiteQuality
SIO_000300: 5.862e1

GenotypeDepth
all individuals: 33
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1717
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48026
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.823461315840247e-4
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.113e0

DP
type: SiteQuality
SIO_000300: 1.659212e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.49e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.002e1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

GenotypeDepth
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48018
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.92975685063682e-4
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.063e0

QD
type: SiteQuality
SIO_000300: 2.997e1

FS
type: SiteQuality
SIO_000300: 3.055e0

DP
type: SiteQuality
SIO_000300: 1.659025e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeDepth
all individuals: 33
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47932
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 6.2e0

FS
type: SiteQuality
SIO_000300: 9.837999999999999e0

DP
type: SiteQuality
SIO_000300: 1.65733e6

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 49
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504845602841149e-5
allele num: 66452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.343e0

VQSLOD
type: SiteQuality
SIO_000300: 6.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

DP
type: SiteQuality
SIO_000300: 1.657047e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.905e0

QD
type: SiteQuality
SIO_000300: 1.166e1

GenotypeDepth
all individuals: 33
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

FS
type: SiteQuality
SIO_000300: 3.849e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.156e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.37e0

DP
type: SiteQuality
SIO_000300: 1.656834e6

GenotypeDepth
all individuals: 157
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47892
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 3.849e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.656834e6

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

GenotypeDepth
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1455
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47862
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505661286437003e-5
allele num: 66416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

DP
type: SiteQuality
SIO_000300: 1.65611e6

QD
type: SiteQuality
SIO_000300: 8.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

FS
type: SiteQuality
SIO_000300: 3.963e0

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.845e1

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028834504482675e-4
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

FS
type: SiteQuality
SIO_000300: 8.529e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.654817e6

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeDepth
all individuals: 15
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.481e1

DP
type: SiteQuality
SIO_000300: 1.6541e6

MQRankSum
type: SiteQuality
SIO_000300: -1.006e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeDepth
all individuals: 13526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.678668215253581e-5
allele num: 10332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.9e0

DP
type: SiteQuality
SIO_000300: 1.652e6

FS
type: SiteQuality
SIO_000300: 9.419999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.091e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeDepth
all individuals: 32
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47621
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017410458344649e-5
allele num: 66282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.209e1

DP
type: SiteQuality
SIO_000300: 1.652118e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47212
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7513
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.706853038245001e-5
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e0

QD
type: SiteQuality
SIO_000300: 1.419e1

DP
type: SiteQuality
SIO_000300: 1.645939e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

GenotypeDepth
all individuals: 16
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0