1-35485253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485253
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485253
    reference: chr 1
allele count: 2
allele frequency: 2.40639137549331e-5
allele num: 83112
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.179-50G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.179-50G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.179-50G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+731G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.179-50G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.179-50G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.179-50G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.119-50G>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13645
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4917
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2929
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

1-35485255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485255
    reference: chr 1
allele count: 1
allele frequency: 1.202877282459643e-5
allele num: 83134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.179-52C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+729C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.179-52C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.179-52C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.179-52C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.179-52C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.179-52C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.119-52C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13602
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6409
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 8139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4922
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6373
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-35485934-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485934
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485934
    reference: chr 1
allele count: 3
allele frequency: 2.492770964203809e-5
allele num: 120348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.178+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.178+50A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.178+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.178+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.178+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.178+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+50A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.118+50A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8348
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

1-35485966-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485966
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485966
    reference: chr 1
allele count: 4
allele frequency: 3.308902602451897e-5
allele num: 120886
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.178+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.178+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.178+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.178+18A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.178+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.118+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+18A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.178+18A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3370
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8772
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-35485967-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485967
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485967
    reference: chr 1
allele count: 3
allele frequency: 2.481430627471092e-5
allele num: 120898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.178+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.178+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.178+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.178+17T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.178+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.178+17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.118+17T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13933
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25081
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

1-35485981-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485981
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485981
    reference: chr 1
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.178+3A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.178+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.178+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.178+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.376+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.178+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.118+3A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.178+3A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14103
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: c.178+3A>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-35485990-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485990
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485990
    reference: chr 1
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.172C>A
  hgvsp: ENSP00000362430.1:p.Pro58Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.112C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.370C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.172C>A
  hgvsp: ENSP00000349708.4:p.Pro58Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.172C>A
  hgvsp: ENSP00000326695.5:p.Pro58Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.172C>A
  hgvsp: ENSP00000421752.1:p.Pro58Thr
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.172C>A
  hgvsp: ENSP00000391337.1:p.Pro58Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.172C>A
  hgvsp: ENSP00000362437.2:p.Pro58Thr
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25526
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8865
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro58Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-35485999-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35485999
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35485999
    reference: chr 1
allele count: 10
allele frequency: 8.244974687927708e-5
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.163A>C
  hgvsp: ENSP00000362430.1:p.Asn55His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.163A>C
  hgvsp: ENSP00000421752.1:p.Asn55His
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.361A>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.163A>C
  hgvsp: ENSP00000326695.5:p.Asn55His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.103A>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.163A>C
  hgvsp: ENSP00000391337.1:p.Asn55His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.163A>C
  hgvsp: ENSP00000362437.2:p.Asn55His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.163A>C
  hgvsp: ENSP00000349708.4:p.Asn55His
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4445
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10788
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn55His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/1-35486000-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486000
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486000
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.162T>G
  hgvsp: ENST00000373333.1:c.162T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.162T>G
  hgvsp: ENST00000487874.1:c.162T>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.162T>G
  hgvsp: ENST00000317538.5:c.162T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.162T>G
  hgvsp: ENST00000415531.1:c.162T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.360T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.162T>G
  hgvsp: ENST00000373340.2:c.162T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.162T>G
  hgvsp: ENST00000357182.4:c.162T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.102T>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val54Val
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-35486013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486013
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486013
    reference: chr 1
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.149G>A
  hgvsp: ENSP00000362430.1:p.Gly50Asp
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.149G>A
  hgvsp: ENSP00000349708.4:p.Gly50Asp
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.149G>A
  hgvsp: ENSP00000362437.2:p.Gly50Asp
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.347G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.149G>A
  hgvsp: ENSP00000421752.1:p.Gly50Asp
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.149G>A
  hgvsp: ENSP00000391337.1:p.Gly50Asp
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.149G>A
  hgvsp: ENSP00000326695.5:p.Gly50Asp
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.89G>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly50Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-35486017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486017
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486017
    reference: chr 1
allele count: 3
allele frequency: 2.473043822336532e-5
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.145G>A
  hgvsp: ENSP00000349708.4:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.145G>A
  hgvsp: ENSP00000362430.1:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.85G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.145G>A
  hgvsp: ENSP00000421752.1:p.Gly49Ser
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.145G>A
  hgvsp: ENSP00000362437.2:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.145G>A
  hgvsp: ENSP00000391337.1:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.145G>A
  hgvsp: ENSP00000326695.5:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.343G>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25597
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly49Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-35486022-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486022
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486022
    reference: chr 1
allele count: 27
allele frequency: 2.225739440102879e-4
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.140A>C
  hgvsp: ENSP00000362430.1:p.Lys47Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.140A>C
  hgvsp: ENSP00000421752.1:p.Lys47Thr
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.338A>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.140A>C
  hgvsp: ENSP00000349708.4:p.Lys47Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.140A>C
  hgvsp: ENSP00000326695.5:p.Lys47Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.80A>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.140A>C
  hgvsp: ENSP00000391337.1:p.Lys47Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.140A>C
  hgvsp: ENSP00000362437.2:p.Lys47Thr
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10790
  bin: 9.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys47Thr
num of homozygotes: 1
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-35486029-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486029
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486029
    reference: chr 1
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.133A>G
  hgvsp: ENSP00000391337.1:p.Lys45Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.133A>G
  hgvsp: ENSP00000362437.2:p.Lys45Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.331A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.133A>G
  hgvsp: ENSP00000421752.1:p.Lys45Glu
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.133A>G
  hgvsp: ENSP00000326695.5:p.Lys45Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.133A>G
  hgvsp: ENSP00000349708.4:p.Lys45Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.73A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.133A>G
  hgvsp: ENSP00000362430.1:p.Lys45Glu
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys45Glu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-35486038-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486038
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486038
    reference: chr 1
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.124C>A
  hgvsp: ENSP00000362430.1:p.Gln42Lys
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.124C>A
  hgvsp: ENSP00000349708.4:p.Gln42Lys
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.124C>A
  hgvsp: ENSP00000326695.5:p.Gln42Lys
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.124C>A
  hgvsp: ENSP00000421752.1:p.Gln42Lys
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.124C>A
  hgvsp: ENSP00000362437.2:p.Gln42Lys
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.124C>A
  hgvsp: ENSP00000391337.1:p.Gln42Lys
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.322C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.64C>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25533
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8871
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10768
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln42Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

1-35486040-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486040
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486040
    reference: chr 1
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.122C>T
  hgvsp: ENSP00000326695.5:p.Thr41Ile
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.320C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.122C>T
  hgvsp: ENSP00000421752.1:p.Thr41Ile
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.122C>T
  hgvsp: ENSP00000362430.1:p.Thr41Ile
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.122C>T
  hgvsp: ENSP00000391337.1:p.Thr41Ile
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.122C>T
  hgvsp: ENSP00000362437.2:p.Thr41Ile
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.122C>T
  hgvsp: ENSP00000349708.4:p.Thr41Ile
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.62C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr41Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

1-35486049-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486049
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486049
    reference: chr 1
allele count: 3
allele frequency: 2.473533194815474e-5
allele num: 121284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.113A>G
  hgvsp: ENSP00000362430.1:p.Gln38Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.113A>G
  hgvsp: ENSP00000362437.2:p.Gln38Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.113A>G
  hgvsp: ENSP00000421752.1:p.Gln38Arg
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.311A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.113A>G
  hgvsp: ENSP00000326695.5:p.Gln38Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.113A>G
  hgvsp: ENSP00000349708.4:p.Gln38Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.113A>G
  hgvsp: ENSP00000391337.1:p.Gln38Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.53A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3402
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8865
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln38Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-35486060-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486060
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486060
    reference: chr 1
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.102A>G
  hgvsp: ENST00000317538.5:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.42A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.300A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.102A>G
  hgvsp: ENST00000357182.4:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.102A>G
  hgvsp: ENST00000373340.2:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.102A>G
  hgvsp: ENST00000373333.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.102A>G
  hgvsp: ENST00000487874.1:c.102A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.102A>G
  hgvsp: ENST00000415531.1:c.102A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23622
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly34Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/1-35486068-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486068
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486068
    reference: chr 1
allele count: 1
allele frequency: 8.421619982819896e-6
allele num: 118742
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94G>T
  hgvsp: ENSP00000349708.4:p.Glu32Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94G>T
  hgvsp: ENSP00000362437.2:p.Glu32Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94G>T
  hgvsp: ENSP00000391337.1:p.Glu32Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94G>T
  hgvsp: ENSP00000326695.5:p.Glu32Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94G>T
  hgvsp: ENSP00000421752.1:p.Glu32Ter
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94G>T
  hgvsp: ENSP00000362430.1:p.Glu32Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292G>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34G>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10752
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu32Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-35486072-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486073
    reference: chr 1
allele count: 1495
allele frequency: 1.5293804730338e-2
allele num: 97752
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-5dupT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-5dupT
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 6.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 4.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 3.25e1
  variant carriers: 384
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 5.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 424
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 4.75e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 2.25e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 5.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 9089
  bin: 6.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 2.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 17
hgvs: c.94-5dupT
num of homozygotes: 5
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum

1-35486072-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486071
    reference: chr 1
allele count: 21993
allele frequency: 2.249877240363369e-1
allele num: 97752
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-5delT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-5delT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-5delT
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 5.75e1
  variant carriers: 982
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 328
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 802
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 5.25e1
  variant carriers: 1360
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 6.25e1
  variant carriers: 687
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 2791
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 4.75e1
  variant carriers: 1721
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 4.25e1
  variant carriers: 2247
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 2.25e1
  variant carriers: 1863
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 3.25e1
  variant carriers: 2987
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 2855
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 909
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 467
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 451
genotype quality: GenotypeQuality
  all individuals: 18302
  bin: 9.75e1
  variant carriers: 14589
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 452
genotype quality: GenotypeQuality
  all individuals: 9089
  bin: 6.25e1
  variant carriers: 281
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 382
hgvs: c.94-5delT
num of homozygotes: 2754
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: TA
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-35486072-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486070
    reference: chr 1
allele count: 58
allele frequency: 5.933382437187986e-4
allele num: 97752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-6_94-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-6_34-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-6_94-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-6_94-5delTT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-6_94-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-6_292-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-6_94-5delTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-6_94-5delTT
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 8
hgvs: c.94-6_94-5delTT
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: TAA
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-35486072-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486072
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486072
    reference: chr 1
allele count: 3
allele frequency: 3.068990915786889e-5
allele num: 97752
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5876
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18302
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8810
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9830
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 3.821461326811372e-5
  allele num: 52336
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7924
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-35486079-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486080
    reference: chr 1
allele count: 1
allele frequency: 8.392218734789103e-6
allele num: 119158
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-12_94-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-12_94-11insC
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-12_94-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-12_34-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-12_292-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-12_94-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-12_94-11insC
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-12_94-11insC
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-35486079-AAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486074
    reference: chr 1
allele count: 1
allele frequency: 8.392218734789103e-6
allele num: 119158
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-16_34-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-16_94-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-16_94-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-16_94-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-16_94-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-16_292-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-16_94-12delCTTTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-16_94-12delCTTTT
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32077
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9420
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: AAAAAG
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

1-35486082-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486082
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486082
    reference: chr 1
allele count: 1
allele frequency: 8.453657052040712e-6
allele num: 118292
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-14T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-14T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-14T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23406
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5119
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-35486084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486084
    reference: chr 1
allele count: 3
allele frequency: 2.567833604382436e-5
allele num: 116830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-16C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-16C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-16C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

1-35486084-GAAAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486084
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486080
    reference: chr 1
allele count: 1
allele frequency: 8.559445347941453e-6
allele num: 116830
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-20_94-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-20_292-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-20_94-17delTTTT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-20_94-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-20_34-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-20_94-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-20_94-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-20_94-17delTTTT
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2055
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: GAAAA
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

1-35486086-AAAGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486086
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486081
    reference: chr 1
allele count: 3
allele frequency: 2.550933641712867e-5
allele num: 117604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-23_94-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-23_94-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-23_94-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-23_292-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-23_34-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-23_94-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-23_94-19delCTCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-23_94-19delCTCTT
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1871
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7400
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: AAAGAG
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-35486098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486098
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486098
    reference: chr 1
allele count: 1
allele frequency: 8.574417368339821e-6
allele num: 116626
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-30C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-30C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-30C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3521
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

1-35486104-A-AATACAATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486112
    reference: chr 1
allele count: 1
allele frequency: 8.623068432671082e-6
allele num: 115968
alternate allele: AATACAATG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16232
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5038
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

1-35486113-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486113
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486113
    reference: chr 1
allele count: 66
allele frequency: 5.771753388718845e-4
allele num: 114350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-45A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-45A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-45A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9234
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13679
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10899
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5637
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4184
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6168
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1447
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13236
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

1-35486115-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486115
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486115
    reference: chr 1
allele count: 1
allele frequency: 8.775624824487504e-6
allele num: 113952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-47A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-47A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-47A>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13659
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5079
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5347
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5841
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-35486115-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35486115
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35486115
    reference: chr 1
allele count: 1
allele frequency: 8.775624824487504e-6
allele num: 113952
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.94-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.94-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.94-47A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.292-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.94-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.94-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.94-47A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.34-47A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13659
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5079
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4210
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

1-35496103-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496103
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496103
    reference: chr 1
allele count: 1
allele frequency: 8.741258741258741e-6
allele num: 114400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+45T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+45T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+45T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+45T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.333T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+45T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+45T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1313T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+45T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10297
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

1-35496104-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496104
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496104
    reference: chr 1
allele count: 1
allele frequency: 8.743704532736431e-6
allele num: 114368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+44T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+44T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+44T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+44T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+44T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1312T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+44T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.332T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+44T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5782
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

1-35496107-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496107
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496107
    reference: chr 1
allele count: 1
allele frequency: 8.719308035714285e-6
allele num: 114688
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+41T>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+41T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+41T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+41T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+41T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1309T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.329T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+41T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+41T>A
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18699
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-35496114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496114
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496114
    reference: chr 1
allele count: 6
allele frequency: 5.199757344657249e-5
allele num: 115390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+34A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+34A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+34A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.322A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1302A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+34A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+34A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+34A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+34A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-35496118-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496118
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496118
    reference: chr 1
allele count: 13
allele frequency: 1.121540478984057e-4
allele num: 115912
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+30A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+30A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+30A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+30A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1298A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+30A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.318A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+30A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+30A>T
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12422
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8547
  bin: 9.75e1
  variant carriers: 13
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-35496119-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496119
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496119
    reference: chr 1
allele count: 4
allele frequency: 3.445365122568864e-5
allele num: 116098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+29T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1297T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.317T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+29T>A
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7117
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-35496127-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496127
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496127
    reference: chr 1
allele count: 1
allele frequency: 8.440670526866655e-6
allele num: 118474
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1289T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+21T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.309T>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+21T>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8599
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3132
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

1-35496137-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496137
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496137
    reference: chr 1
allele count: 2
allele frequency: 1.661212352775055e-5
allele num: 120394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+11C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+11C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+11C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+11C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1279C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.299C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+11C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+11C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+11C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ

1-35496144-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496144
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496144
    reference: chr 1
allele count: 1
allele frequency: 8.276501357346223e-6
allele num: 120824
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.292A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1272A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.93+4A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.93+4A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.291+4A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.93+4A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.93+4A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.93+4A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.93+4A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: c.93+4A>G
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

1-35496149-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496149
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496149
    reference: chr 1
allele count: 5
allele frequency: 4.132641253678051e-5
allele num: 120988
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.92A>G
  hgvsp: ENSP00000421752.1:p.Gln31Arg
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1267A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.92A>G
  hgvsp: ENSP00000362430.1:p.Gln31Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.287A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.92A>G
  hgvsp: ENSP00000326695.5:p.Gln31Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.92A>G
  hgvsp: ENSP00000391337.1:p.Gln31Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.92A>G
  hgvsp: ENSP00000349708.4:p.Gln31Arg
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.290A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.92A>G
  hgvsp: ENSP00000362437.2:p.Gln31Arg
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30417
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln31Arg
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

1-35496155-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496155
    reference: chr 1
allele count: 2
allele frequency: 1.65144584083365e-5
allele num: 121106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.86A>G
  hgvsp: ENSP00000326695.5:p.Asn29Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.86A>G
  hgvsp: ENSP00000421752.1:p.Asn29Ser
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.86A>G
  hgvsp: ENSP00000362437.2:p.Asn29Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.86A>G
  hgvsp: ENSP00000362430.1:p.Asn29Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1261A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.86A>G
  hgvsp: ENSP00000349708.4:p.Asn29Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.86A>G
  hgvsp: ENSP00000391337.1:p.Asn29Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.284A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.281A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn29Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-35496159-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496159
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496159
    reference: chr 1
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.82G>T
  hgvsp: ENSP00000362430.1:p.Asp28Tyr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1257G>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.82G>T
  hgvsp: ENSP00000362437.2:p.Asp28Tyr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.277G>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.82G>T
  hgvsp: ENSP00000391337.1:p.Asp28Tyr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.82G>T
  hgvsp: ENSP00000326695.5:p.Asp28Tyr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.82G>T
  hgvsp: ENSP00000349708.4:p.Asp28Tyr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.280G>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.82G>T
  hgvsp: ENSP00000421752.1:p.Asp28Tyr
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7842
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp28Tyr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

1-35496159-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496159
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496159
    reference: chr 1
allele count: 69
allele frequency: 5.695418902187371e-4
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.82G>C
  hgvsp: ENSP00000362437.2:p.Asp28His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1257G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.280G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.82G>C
  hgvsp: ENSP00000391337.1:p.Asp28His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.82G>C
  hgvsp: ENSP00000362430.1:p.Asp28His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.82G>C
  hgvsp: ENSP00000349708.4:p.Asp28His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.82G>C
  hgvsp: ENSP00000326695.5:p.Asp28His
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.82G>C
  hgvsp: ENSP00000421752.1:p.Asp28His
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.277G>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8691
  bin: 9.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3455
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp28His
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-35496160-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496160
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496160
    reference: chr 1
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.279A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.81A>G
  hgvsp: ENST00000357182.4:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.81A>G
  hgvsp: ENST00000317538.5:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.81A>G
  hgvsp: ENST00000373340.2:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.81A>G
  hgvsp: ENST00000415531.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.81A>G
  hgvsp: ENST00000373333.1:c.81A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.276A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.81A>G
  hgvsp: ENST00000487874.1:c.81A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1256A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7845
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro27Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

1-35496166-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496166
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496166
    reference: chr 1
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.75A>G
  hgvsp: ENST00000373333.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.273A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.75A>G
  hgvsp: ENST00000415531.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.75A>G
  hgvsp: ENST00000317538.5:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.75A>G
  hgvsp: ENST00000487874.1:c.75A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.75A>G
  hgvsp: ENST00000373340.2:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.270A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.75A>G
  hgvsp: ENST00000357182.4:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1250A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu25Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-35496174-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496174
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496174
    reference: chr 1
allele count: 230
allele frequency: 1.896469268952324e-3
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.262A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.67A>G
  hgvsp: ENSP00000421752.1:p.Ile23Val
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1242A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.265A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.67A>G
  hgvsp: ENSP00000362437.2:p.Ile23Val
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.67A>G
  hgvsp: ENSP00000326695.5:p.Ile23Val
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.67A>G
  hgvsp: ENSP00000362430.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.67A>G
  hgvsp: ENSP00000391337.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.67A>G
  hgvsp: ENSP00000349708.4:p.Ile23Val
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7365
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile23Val
num of homozygotes: 3
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

1-35496177-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496177
    reference: chr 1
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.64A>G
  hgvsp: ENSP00000362430.1:p.Lys22Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.259A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.262A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.64A>G
  hgvsp: ENSP00000362437.2:p.Lys22Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.64A>G
  hgvsp: ENSP00000349708.4:p.Lys22Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.64A>G
  hgvsp: ENSP00000326695.5:p.Lys22Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1239A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.64A>G
  hgvsp: ENSP00000391337.1:p.Lys22Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.64A>G
  hgvsp: ENSP00000421752.1:p.Lys22Glu
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys22Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

1-35496178-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496178
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496178
    reference: chr 1
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.63C>A
  hgvsp: ENSP00000362437.2:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1238C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.261C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.63C>A
  hgvsp: ENSP00000391337.1:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.258C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.63C>A
  hgvsp: ENSP00000349708.4:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.63C>A
  hgvsp: ENSP00000326695.5:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.63C>A
  hgvsp: ENSP00000362430.1:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.63C>A
  hgvsp: ENSP00000421752.1:p.Asp21Glu
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4477
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp21Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

1-35496187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496187
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496187
    reference: chr 1
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.54G>A
  hgvsp: ENST00000487874.1:c.54G>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.54G>A
  hgvsp: ENST00000415531.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.54G>A
  hgvsp: ENST00000317538.5:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.54G>A
  hgvsp: ENST00000373340.2:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.54G>A
  hgvsp: ENST00000373333.1:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.252G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.249G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.54G>A
  hgvsp: ENST00000357182.4:c.54G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1229G>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu18Glu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-35496192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496192
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496192
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.49C>T
  hgvsp: ENSP00000421752.1:p.Gln17Ter
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.49C>T
  hgvsp: ENSP00000362430.1:p.Gln17Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.247C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.49C>T
  hgvsp: ENSP00000391337.1:p.Gln17Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.49C>T
  hgvsp: ENSP00000362437.2:p.Gln17Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.49C>T
  hgvsp: ENSP00000326695.5:p.Gln17Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.244C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.49C>T
  hgvsp: ENSP00000349708.4:p.Gln17Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1224C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln17Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

1-35496192-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496192
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496192
    reference: chr 1
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.49C>G
  hgvsp: ENSP00000421752.1:p.Gln17Glu
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.49C>G
  hgvsp: ENSP00000349708.4:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.49C>G
  hgvsp: ENSP00000391337.1:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.247C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.244C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.49C>G
  hgvsp: ENSP00000326695.5:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.49C>G
  hgvsp: ENSP00000362430.1:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1224C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.49C>G
  hgvsp: ENSP00000362437.2:p.Gln17Glu
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln17Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

1-35496194-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496194
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496194
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.242A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1222A>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.47A>T
  hgvsp: ENSP00000349708.4:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.47A>T
  hgvsp: ENSP00000362430.1:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.47A>T
  hgvsp: ENSP00000362437.2:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.47A>T
  hgvsp: ENSP00000421752.1:p.Gln16Leu
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.47A>T
  hgvsp: ENSP00000326695.5:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.47A>T
  hgvsp: ENSP00000391337.1:p.Gln16Leu
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.245A>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4479
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln16Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

1-35496195-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496195
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496195
    reference: chr 1
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.46C>T
  hgvsp: ENSP00000391337.1:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.46C>T
  hgvsp: ENSP00000421752.1:p.Gln16Ter
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.241C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.46C>T
  hgvsp: ENSP00000349708.4:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.46C>T
  hgvsp: ENSP00000362430.1:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.46C>T
  hgvsp: ENSP00000362437.2:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.46C>T
  hgvsp: ENSP00000326695.5:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.244C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1221C>T
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln16Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-35496199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496199
    reference: chr 1
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.42A>G
  hgvsp: ENST00000373333.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.42A>G
  hgvsp: ENST00000415531.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.237A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.42A>G
  hgvsp: ENST00000357182.4:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.42A>G
  hgvsp: ENST00000373340.2:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.42A>G
  hgvsp: ENST00000317538.5:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.240A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.42A>G
  hgvsp: ENST00000487874.1:c.42A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1217A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8801
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val14Val
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-35496211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496211
    reference: chr 1
allele count: 6
allele frequency: 4.943072284193702e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.30C>T
  hgvsp: ENST00000415531.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.225C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.228C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.30C>T
  hgvsp: ENST00000317538.5:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.30C>T
  hgvsp: ENST00000373333.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.30C>T
  hgvsp: ENST00000373340.2:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.30C>T
  hgvsp: ENST00000357182.4:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1205C>T
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.30C>T
  hgvsp: ENST00000487874.1:c.30C>T(p.%3D)
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly10Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

1-35496216-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496216
    reference: chr 1
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.25T>A
  hgvsp: ENSP00000421752.1:p.Cys9Ser
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1200T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.25T>A
  hgvsp: ENSP00000362437.2:p.Cys9Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.25T>A
  hgvsp: ENSP00000349708.4:p.Cys9Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.220T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.25T>A
  hgvsp: ENSP00000326695.5:p.Cys9Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.25T>A
  hgvsp: ENSP00000391337.1:p.Cys9Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.25T>A
  hgvsp: ENSP00000362430.1:p.Cys9Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.223T>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Cys9Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-35496227-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496227
    reference: chr 1
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.14T>C
  hgvsp: ENSP00000349708.4:p.Leu5Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.14T>C
  hgvsp: ENSP00000326695.5:p.Leu5Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.14T>C
  hgvsp: ENSP00000362430.1:p.Leu5Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1189T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.14T>C
  hgvsp: ENSP00000391337.1:p.Leu5Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.14T>C
  hgvsp: ENSP00000362437.2:p.Leu5Ser
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.14T>C
  hgvsp: ENSP00000421752.1:p.Leu5Ser
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.209T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.212T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu5Ser
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-35496227-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496227
    reference: chr 1
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.14T>A
  hgvsp: ENSP00000349708.4:p.Leu5Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.14T>A
  hgvsp: ENSP00000362430.1:p.Leu5Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.14T>A
  hgvsp: ENSP00000391337.1:p.Leu5Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1189T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.14T>A
  hgvsp: ENSP00000421752.1:p.Leu5Ter
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.212T>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.14T>A
  hgvsp: ENSP00000362437.2:p.Leu5Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.14T>A
  hgvsp: ENSP00000326695.5:p.Leu5Ter
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.209T>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu5Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-35496231-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496231
    reference: chr 1
allele count: 3
allele frequency: 2.471739775236463e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.10C>A
  hgvsp: ENSP00000349708.4:p.Pro4Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1185C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.10C>A
  hgvsp: ENSP00000326695.5:p.Pro4Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.10C>A
  hgvsp: ENSP00000421752.1:p.Pro4Thr
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.10C>A
  hgvsp: ENSP00000362430.1:p.Pro4Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.10C>A
  hgvsp: ENSP00000362437.2:p.Pro4Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.10C>A
  hgvsp: ENSP00000391337.1:p.Pro4Thr
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.205C>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.208C>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8806
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Pro4Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

1-35496242-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496242
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496242
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-2G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.194G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-2G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-2G>C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-2G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-2G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.197G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-2G>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1174G>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30363
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

1-35496246-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496246
    reference: chr 1
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-6A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-6A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.190A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-6A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-6A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-6A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1170A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.193A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-6A>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8804
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3208
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

1-35496247-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496247
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496247
    reference: chr 1
allele count: 16
allele frequency: 1.318500206015657e-4
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.192A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-7A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-7A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-7A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1169A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-7A>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-7A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.189A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

1-35496251-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496251
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496251
    reference: chr 1
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.188A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-11A>G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-11A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1165A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-11A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-11A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.185A>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-11A>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-35496257-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496257
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496257
    reference: chr 1
allele count: 402
allele frequency: 3.313441693317069e-3
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1159T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-17T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.182T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-17T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.179T>C
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-17T>C
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 13172
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 30006
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7351
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 9.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 8
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

1-35496268-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496268
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496268
    reference: chr 1
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-28G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-28G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-28G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1148G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-28G>A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-28G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-28G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.171G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.168G>A
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

1-35496270-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496270
    reference: chr 1
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-30C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-30C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.166C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-30C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.169C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1146C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-30C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-30C>G
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-30C>G
  variant of: http://identifiers.org/hgnc/13050
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8998
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

1-35496278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 35496278
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 35496278
    reference: chr 1
allele count: 2
allele frequency: 1.649212501030758e-5
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362430
  ensembl transcript: ENST00000373333
  gene symbol: ZMYM6
  hgvsc: ENST00000373333.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000471566
  gene symbol: ZMYM6
  hgvsc: ENST00000471566.1:n.158G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000349708
  ensembl transcript: ENST00000357182
  gene symbol: ZMYM6
  hgvsc: ENST00000357182.4:c.-38G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000493328
  gene symbol: ZMYM6
  hgvsc: ENST00000493328.1:n.161G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000391337
  ensembl transcript: ENST00000415531
  gene symbol: ZMYM6
  hgvsc: ENST00000415531.1:c.-38G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000326695
  ensembl transcript: ENST00000317538
  gene symbol: ZMYM6
  hgvsc: ENST00000317538.5:c.-38G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000163867
  ensembl transcript: ENST00000460607
  gene symbol: ZMYM6
  hgvsc: ENST00000460607.1:n.33+1138G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000163867
  ensembl protein: ENSP00000362437
  ensembl transcript: ENST00000373340
  gene symbol: ZMYM6
  hgvsc: ENST00000373340.2:c.-38G>A
  variant of: http://identifiers.org/hgnc/13050
annotation: Annotation
  canonical: true
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000271741
  ensembl protein: ENSP00000421752
  ensembl transcript: ENST00000487874
  gene symbol: RP11-244H3.4
  hgvsc: ENST00000487874.1:c.-38G>A
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7390
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13232
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9000
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2078
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

1-35496282-T-C
type: Variant
allele count: 11
allele frequency: 9.071267173558081e-5
allele num: 121262
alternate allele: C
canonical: true
consequence: 5' UTR
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 6492
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6364
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 367
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8144
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.964719833975689e-4
allele num: 6746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.29e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.733e0

DP
type: SiteQuality
SIO_000300: 8.91365e5

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10626
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.485001485001485e-4
allele num: 6734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5702
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.91249e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

QD
type: SiteQuality
SIO_000300: 1.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: 2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.28e-1

GenotypeQuality
all individuals: 733
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10793
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3451
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18285
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.16242e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.94e-1

FS
type: SiteQuality
SIO_000300: 3.297e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e0

QD
type: SiteQuality
SIO_000300: 1.474e1

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10793
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2363
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.015942246954429e-5
allele num: 66490
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

DP
type: SiteQuality
SIO_000300: 2.213717e6

QD
type: SiteQuality
SIO_000300: 1.522e1

FS
type: SiteQuality
SIO_000300: 4.625e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.55e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 3490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10790
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8776
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.891287586738628e-4
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.85e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

FS
type: SiteQuality
SIO_000300: 4.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 2.214278e6

VQSLOD
type: SiteQuality
SIO_000300: -1.343e0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10786
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3395
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.22078e6

VQSLOD
type: SiteQuality
SIO_000300: -1.958e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.08e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 1637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10785
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

QD
type: SiteQuality
SIO_000300: 7.61e0

FS
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 2.22289e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.009e0

VQSLOD
type: SiteQuality
SIO_000300: -1.641e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25600
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.064281382656155e-4
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.224646e6

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.889e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e-1

GenotypeQuality
all individuals: 25609
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10783
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4446
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

FS
type: SiteQuality
SIO_000300: 9.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.382e0

VQSLOD
type: SiteQuality
SIO_000300: -2.826e0

QD
type: SiteQuality
SIO_000300: 5.14e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

DP
type: SiteQuality
SIO_000300: 2.224241e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25599
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

QD
type: SiteQuality
SIO_000300: 1.126e1

DP
type: SiteQuality
SIO_000300: 2.224519e6

VQSLOD
type: SiteQuality
SIO_000300: -1.328e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.473e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 8.19e0

MQ
type: SiteQuality
SIO_000300: 5.839e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

DP
type: SiteQuality
SIO_000300: 2.224635e6

VQSLOD
type: SiteQuality
SIO_000300: -1.608e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.360000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 2.307692307692308e-3
allele num: 10400
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Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.93e-1

DP
type: SiteQuality
SIO_000300: 2.226723e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.91e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 1.425e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.225227e6

QD
type: SiteQuality
SIO_000300: 1.431e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.631e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.2e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.797e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 2.225103e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8866
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e-1

DP
type: SiteQuality
SIO_000300: 2.224905e6

MQRankSum
type: SiteQuality
SIO_000300: 7.38e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
type: SiteQuality
SIO_000300: 1.152e1

InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.501665616278023e-5
allele num: 66642
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.374e1

VQSLOD
type: SiteQuality
SIO_000300: 9.09e-1

DP
type: SiteQuality
SIO_000300: 2.224608e6

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 2.569e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 2.228421e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.134969325153375e-5
allele num: 16300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.329000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.014e1

DP
type: SiteQuality
SIO_000300: 2.340357e6

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.872e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

GenotypeQuality
all individuals: 5876
bin: 2.5e0
variant carriers: 155

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 27

GenotypeQuality
all individuals: 1273
bin: 4.75e1
variant carriers: 62

GenotypeQuality
all individuals: 1464
bin: 4.25e1
variant carriers: 59

GenotypeQuality
all individuals: 856
bin: 5.75e1
variant carriers: 38

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1583
bin: 3.75e1
variant carriers: 66

GenotypeQuality
all individuals: 2052
bin: 7.5e0
variant carriers: 180

GenotypeQuality
all individuals: 1520
bin: 7.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1864
bin: 1.25e1
variant carriers: 132

GenotypeQuality
all individuals: 2196
bin: 2.75e1
variant carriers: 96

GenotypeQuality
all individuals: 3219
bin: 6.75e1
variant carriers: 34

GenotypeQuality
all individuals: 1072
bin: 8.25e1
variant carriers: 22

GenotypeQuality
all individuals: 18302
bin: 9.75e1
variant carriers: 716

African
type: Population
allele count: 27
allele frequency: 2.746693794506613e-3
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 78
allele frequency: 1.25968992248062e-2
allele num: 6192
num of homozygotes: 0

Latino
type: Population
allele count: 61
allele frequency: 6.923950056753689e-3
allele num: 8810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 865
allele frequency: 1.652782023845919e-2
allele num: 52336
num of homozygotes: 5

South Asian
type: Population
allele count: 426
allele frequency: 3.576826196473552e-2
allele num: 11910
num of homozygotes: 0

East Asian
type: Population
allele count: 28
allele frequency: 3.53356890459364e-3
allele num: 7924
num of homozygotes: 0

Other
type: Population
allele count: 10
allele frequency: 1.333333333333333e-2
allele num: 750
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.082e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

MQ
type: SiteQuality
SIO_000300: 5.996e1

QD
type: SiteQuality
SIO_000300: 1.075e1

DP
type: SiteQuality
SIO_000300: 2.471718e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 229

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 200

GenotypeQuality
all individuals: 1072
bin: 8.25e1
variant carriers: 216

GenotypeQuality
all individuals: 1583
bin: 3.75e1
variant carriers: 424

GenotypeQuality
all individuals: 5876
bin: 2.5e0
variant carriers: 391

GenotypeQuality
all individuals: 1520
bin: 7.75e1
variant carriers: 252

GenotypeQuality
all individuals: 856
bin: 5.75e1
variant carriers: 294

GenotypeQuality
all individuals: 1273
bin: 4.75e1
variant carriers: 339

GenotypeQuality
all individuals: 1068
bin: 5.25e1
variant carriers: 300

GenotypeQuality
all individuals: 1932
bin: 3.25e1
variant carriers: 449

GenotypeQuality
all individuals: 2795
bin: 2.25e1
variant carriers: 445

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 199

GenotypeQuality
all individuals: 2052
bin: 7.5e0
variant carriers: 433

GenotypeQuality
all individuals: 3219
bin: 6.75e1
variant carriers: 239

European (Non-Finnish)
type: Population
allele count: 7063
allele frequency: 1.349549067563436e-1
allele num: 52336
num of homozygotes: 171

South Asian
type: Population
allele count: 3135
allele frequency: 2.632241813602015e-1
allele num: 11910
num of homozygotes: 137

African
type: Population
allele count: 5900
allele frequency: 6.002034587995931e-1
allele num: 9830
num of homozygotes: 1686

Other
type: Population
allele count: 150
allele frequency: 2.0e-1
allele num: 750
num of homozygotes: 8

Latino
type: Population
allele count: 1931
allele frequency: 2.191827468785471e-1
allele num: 8810
num of homozygotes: 112

East Asian
type: Population
allele count: 3460
allele frequency: 4.366481574962141e-1
allele num: 7924
num of homozygotes: 635

European (Finnish)
type: Population
allele count: 354
allele frequency: 5.717054263565891e-2
allele num: 6192
num of homozygotes: 5

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.082e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

DP
type: SiteQuality
SIO_000300: 2.471718e6

GenotypeQuality
all individuals: 5876
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 749
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 7.5e0
variant carriers: 11

GenotypeQuality
all individuals: 2795
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9089
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 18302
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1273
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1464
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 856
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3219
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1583
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1520
bin: 7.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.614987080103359e-4
allele num: 6192
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.40522133938706e-4
allele num: 8810
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 8.396305625524769e-4
allele num: 11910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.483949862427392e-4
allele num: 52336
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 1.009591115598183e-3
allele num: 7924
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 2.339776195320448e-3
allele num: 9830
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.075e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.082e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

DP
type: SiteQuality
SIO_000300: 2.471718e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.396305625524769e-5
allele num: 11910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 5.996e1

DP
type: SiteQuality
SIO_000300: 2.471718e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.082e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.075e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5136
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 383
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.859988168014199e-5
allele num: 10142
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.117e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

MQRankSum
type: SiteQuality
SIO_000300: -3.56e-1

DP
type: SiteQuality
SIO_000300: 1.858788e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 5.879e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.02e-1

GenotypeQuality
all individuals: 2963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2601
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5136
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 730
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527790509365356e-5
allele num: 65454
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 1.858788e6

MQRankSum
type: SiteQuality
SIO_000300: -3.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.117e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.879e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.02e-1

GenotypeQuality
all individuals: 409
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540594669542443e-5
allele num: 64910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.264e1

VQSLOD
type: SiteQuality
SIO_000300: -3.784e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e0

FS
type: SiteQuality
SIO_000300: 9.355e0

DP
type: SiteQuality
SIO_000300: 1.822664e6

MQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 912
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7229
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5040
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1895
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27158
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.117206982543641e-5
allele num: 64160
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.006238679814852e-4
allele num: 9938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.747e0

MQ
type: SiteQuality
SIO_000300: 5.867e1

DP
type: SiteQuality
SIO_000300: 1.781099e6

QD
type: SiteQuality
SIO_000300: 3.25e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.377e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.124e0

VQSLOD
type: SiteQuality
SIO_000300: -1.524e0

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
all individuals: 2516
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27158
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55860349127182e-5
allele num: 64160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.867e1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

FS
type: SiteQuality
SIO_000300: 9.747e0

DP
type: SiteQuality
SIO_000300: 1.781099e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.48e0

VQSLOD
type: SiteQuality
SIO_000300: -1.524e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.124e0

QD
type: SiteQuality
SIO_000300: 3.25e0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5053
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.648568240981777e-5
allele num: 64536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQRankSum
type: SiteQuality
SIO_000300: -2.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
SIO_000300: 1.047e1

DP
type: SiteQuality
SIO_000300: 1.764482e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.505e1

GenotypeQuality
all individuals: 659
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563526063979486e-5
allele num: 63958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

DP
type: SiteQuality
SIO_000300: 1.67401e6

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.257e0

QD
type: SiteQuality
SIO_000300: 1.335e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572722697533971e-5
allele num: 63584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.346e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 4.996e1

DP
type: SiteQuality
SIO_000300: 1.602383e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 6.63e0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 66

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 47
allele frequency: 7.510386705017577e-4
allele num: 62580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.214833759590793e-3
allele num: 15640
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11100
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.527145e6

VQSLOD
type: SiteQuality
SIO_000300: 5.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

QD
type: SiteQuality
SIO_000300: 1.608e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6350
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GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6039521380682e-5
allele num: 62346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.515962e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1551
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GenotypeQuality
all individuals: 11010
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6039521380682e-5
allele num: 62346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.39e0

DP
type: SiteQuality
SIO_000300: 1.515962e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600819619645258e-5
allele num: 62468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.995e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

QD
type: SiteQuality
SIO_000300: 1.84e1

DP
type: SiteQuality
SIO_000300: 1.564321e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16196
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.048657718120805e-4
allele num: 9536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.573435e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.04602510460251e-4
allele num: 9560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.601331e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.16e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63076
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.385996409335727e-4
allele num: 11140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16272
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

FS
type: SiteQuality
SIO_000300: 1.0881e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

DP
type: SiteQuality
SIO_000300: 1.652349e6

VQSLOD
type: SiteQuality
SIO_000300: -1.007e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

GenotypeQuality
all individuals: 322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.15288331178863e-5
allele num: 63434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.03498240529911e-3
allele num: 9662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.301e0

DP
type: SiteQuality
SIO_000300: 1.67726e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1489
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.032417922775139e-4
allele num: 9686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.22684333210649e-4
allele num: 16302
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.14e-1

FS
type: SiteQuality
SIO_000300: 4.279e0

QD
type: SiteQuality
SIO_000300: 9.9e0

VQSLOD
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

DP
type: SiteQuality
SIO_000300: 1.684363e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.804366966015144e-5
allele num: 11358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65180
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.988e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.099e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
type: SiteQuality
SIO_000300: 1.729006e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -1.29e0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510391493475109e-5
allele num: 66208
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

DP
type: SiteQuality
SIO_000300: 1.750858e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.706e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.099e1

VQSLOD
type: SiteQuality
SIO_000300: 2.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7824
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.755126e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

MQRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.58e0

VQSLOD
type: SiteQuality
SIO_000300: -1.888e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7835
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.816658911121452e-4
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.91e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

QD
type: SiteQuality
SIO_000300: 1.424e1

MQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

FS
type: SiteQuality
SIO_000300: 7.033e0

DP
type: SiteQuality
SIO_000300: 1.756868e6

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2061
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
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African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.461e1

BaseQRankSum
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SIO_000300: 4.14e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4484
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.762629e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

FS
type: SiteQuality
SIO_000300: 7.23e-1

QD
type: SiteQuality
SIO_000300: 1.44e1

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29230
bin: 6.25e1
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GenotypeQuality
all individuals: 4484
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
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GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 59
allele frequency: 8.857262955623611e-4
allele num: 66612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.901915264074289e-4
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 7.23e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.762629e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

QD
type: SiteQuality
SIO_000300: 1.44e1

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8673
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.760462e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 1.242e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.365e0

FS
type: SiteQuality
SIO_000300: 9.545999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -5.086000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29267
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 8674
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variant carriers: 1

GenotypeQuality
all individuals: 1555
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

QD
type: SiteQuality
SIO_000300: 1.36e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.076e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.761074e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4472
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7819
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 8858
bin: 9.75e1
variant carriers: 227

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456619426201175e-4
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 224
allele frequency: 2.161327672713238e-2
allele num: 10364
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999310158663508e-5
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.58e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.58e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

QD
type: SiteQuality
SIO_000300: 1.467e1

DP
type: SiteQuality
SIO_000300: 1.781987e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3453
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8798
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4476
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3208
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2066
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 29245
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7827
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

MQ
type: SiteQuality
SIO_000300: 5.873e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.763e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.768078e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: -5.993000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
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variant carriers: 0

GenotypeQuality
all individuals: 8797
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variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 29240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 7827
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3453
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

FS
type: SiteQuality
SIO_000300: 5.265e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.547e0

DP
type: SiteQuality
SIO_000300: 1.768301e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8798
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.768749e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

FS
type: SiteQuality
SIO_000300: 2.087e0

QD
type: SiteQuality
SIO_000300: 1.071e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.536e0

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.78e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.656e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1554
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GenotypeQuality
all individuals: 8800
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.768942e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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SIO_000300: -1.74e-1

BaseQRankSum
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SIO_000300: -2.97e-1

FS
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SIO_000300: 3.413e0

ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10380
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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allele frequency: 6.056935190793458e-5
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European (Finnish)
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allele frequency: 0.0e0
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FS
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SIO_000300: 3.413e0

ReadPosRankSum
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DP
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VQSLOD
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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Latino
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Other
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DP
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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African
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South Asian
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQRankSum
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MQ
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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European (Non-Finnish)
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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Other
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European (Finnish)
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ReadPosRankSum
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QD
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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East Asian
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Latino
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Other
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European (Non-Finnish)
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MQRankSum
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QD
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BaseQRankSum
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FS
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MQ
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VQSLOD
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10382
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Latino
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 9.27e-1

VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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QD
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MQ
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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SIO_000300: 5.957e1

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66718
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South Asian
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allele num: 16510
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Other
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.049192122066009e-4
allele num: 66718
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.360749924402782e-3
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
type: Population
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Latino
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 4.15e0

VQSLOD
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DP
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MQ
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InbreedingCoeff
type: SiteQuality
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FS
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

East Asian
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allele count: 378
allele frequency: 4.373987502892849e-2
allele num: 8642
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African
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allele frequency: 3.856536829926726e-4
allele num: 10372
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Other
type: Population
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South Asian
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allele frequency: 1.029678982434888e-3
allele num: 16510
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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Latino
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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African
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East Asian
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South Asian
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Latino
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Other
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European (Non-Finnish)
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allele num: 66686
num of homozygotes: 0

FS
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999490086685263e-5
allele num: 66678
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.557e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.772266e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.259e1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1