22-31059860-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059860
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059860
    reference: chr 22
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.131A>G
  hgvsp: ENSP00000385463.1:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.131A>G
  hgvsp: ENSP00000386063.1:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.131A>G
  hgvsp: ENSP00000366291.3:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.131A>G
  hgvsp: ENSP00000384946.1:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1620T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2934A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.131A>G
  hgvsp: ENSP00000333917.3:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.131A>G
  hgvsp: ENSP00000340795.4:p.Asn44Ser
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn44Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

22-31059877-CTTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059877
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059874
    reference: chr 22
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.111_113delCAA
  hgvsp: ENSP00000340795.4:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.111_113delCAA
  hgvsp: ENSP00000385463.1:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.111_113delCAA
  hgvsp: ENSP00000384946.1:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.111_113delCAA
  hgvsp: ENSP00000366291.3:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1596_548-1594delTTG
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.111_113delCAA
  hgvsp: ENSP00000333917.3:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.111_113delCAA
  hgvsp: ENSP00000386063.1:p.Asn37del
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2914_558+2916delCAA
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1820
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47143
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn37del
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CTTG
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum

22-31059888-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059888
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059888
    reference: chr 22
allele count: 18
allele frequency: 1.482579688658265e-4
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.103G>A
  hgvsp: ENSP00000386063.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.103G>A
  hgvsp: ENSP00000366291.3:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.103G>A
  hgvsp: ENSP00000384946.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2906G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.103G>A
  hgvsp: ENSP00000385463.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.103G>A
  hgvsp: ENSP00000340795.4:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.103G>A
  hgvsp: ENSP00000333917.3:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1592C>T
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47139
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala35Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

22-31059889-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059889
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059889
    reference: chr 22
allele count: 4
allele frequency: 3.294621530351701e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.102C>T
  hgvsp: ENST00000404885.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.102C>T
  hgvsp: ENST00000403268.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1591G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.102C>T
  hgvsp: ENST00000334679.3:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.102C>T
  hgvsp: ENST00000377087.3:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.102C>T
  hgvsp: ENST00000342474.4:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.102C>T
  hgvsp: ENST00000407308.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2905C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala34Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

22-31059899-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059899
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059899
    reference: chr 22
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.92A>G
  hgvsp: ENSP00000333917.3:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.92A>G
  hgvsp: ENSP00000366291.3:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1581T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.92A>G
  hgvsp: ENSP00000386063.1:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.92A>G
  hgvsp: ENSP00000384946.1:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.92A>G
  hgvsp: ENSP00000385463.1:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2895A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.92A>G
  hgvsp: ENSP00000340795.4:p.Asn31Ser
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn31Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

22-31059906-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059906
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059906
    reference: chr 22
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2888A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.85A>G
  hgvsp: ENSP00000385463.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1574T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.85A>G
  hgvsp: ENSP00000340795.4:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.85A>G
  hgvsp: ENSP00000366291.3:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.85A>G
  hgvsp: ENSP00000386063.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.85A>G
  hgvsp: ENSP00000333917.3:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.85A>G
  hgvsp: ENSP00000384946.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile29Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

22-31059917-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059917
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059917
    reference: chr 22
allele count: 4
allele frequency: 3.296250515039143e-5
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2877A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.74A>G
  hgvsp: ENSP00000340795.4:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1563T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.74A>G
  hgvsp: ENSP00000366291.3:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.74A>G
  hgvsp: ENSP00000384946.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.74A>G
  hgvsp: ENSP00000333917.3:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.74A>G
  hgvsp: ENSP00000386063.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.74A>G
  hgvsp: ENSP00000385463.1:p.Lys25Arg
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys25Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

22-31059920-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059920
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059920
    reference: chr 22
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.71C>G
  hgvsp: ENSP00000384946.1:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.71C>G
  hgvsp: ENSP00000333917.3:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.71C>G
  hgvsp: ENSP00000366291.3:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.71C>G
  hgvsp: ENSP00000386063.1:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2874C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.71C>G
  hgvsp: ENSP00000385463.1:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1560G>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.71C>G
  hgvsp: ENSP00000340795.4:p.Thr24Ser
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr24Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum

22-31059920-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059920
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059920
    reference: chr 22
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.71C>A
  hgvsp: ENSP00000385463.1:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.71C>A
  hgvsp: ENSP00000333917.3:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.71C>A
  hgvsp: ENSP00000386063.1:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1560G>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2874C>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.71C>A
  hgvsp: ENSP00000384946.1:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.71C>A
  hgvsp: ENSP00000340795.4:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.71C>A
  hgvsp: ENSP00000366291.3:p.Thr24Asn
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47015
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr24Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

22-31059924-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059924
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059924
    reference: chr 22
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1556T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.67A>G
  hgvsp: ENSP00000366291.3:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.67A>G
  hgvsp: ENSP00000384946.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.67A>G
  hgvsp: ENSP00000385463.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.67A>G
  hgvsp: ENSP00000340795.4:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.67A>G
  hgvsp: ENSP00000386063.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.67A>G
  hgvsp: ENSP00000333917.3:p.Ile23Val
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2870A>G
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile23Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

22-31059925-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059925
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059925
    reference: chr 22
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.66G>C
  hgvsp: ENSP00000384946.1:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.66G>C
  hgvsp: ENSP00000333917.3:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.66G>C
  hgvsp: ENSP00000340795.4:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1555C>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.66G>C
  hgvsp: ENSP00000366291.3:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.66G>C
  hgvsp: ENSP00000386063.1:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.66G>C
  hgvsp: ENSP00000385463.1:p.Gln22His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2869G>C
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46828
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln22His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

22-31059929-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059929
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059929
    reference: chr 22
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.62C>T
  hgvsp: ENSP00000384946.1:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.62C>T
  hgvsp: ENSP00000386063.1:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2865C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.62C>T
  hgvsp: ENSP00000385463.1:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.62C>T
  hgvsp: ENSP00000333917.3:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1551G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.62C>T
  hgvsp: ENSP00000366291.3:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.62C>T
  hgvsp: ENSP00000340795.4:p.Ser21Leu
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28359
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser21Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

22-31059929-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059929
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059930
    reference: chr 22
allele count: 32
allele frequency: 2.644234741939216e-4
allele num: 121018
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.61dupT
  hgvsp: ENSP00000385463.1:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2864dupT
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.61dupT
  hgvsp: ENSP00000333917.3:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.61dupT
  hgvsp: ENSP00000366291.3:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.61dupT
  hgvsp: ENSP00000384946.1:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.61dupT
  hgvsp: ENSP00000340795.4:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1550dupA
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.61dupT
  hgvsp: ENSP00000386063.1:p.Ser21PhefsTer23
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21544
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser21PhefsTer23
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

22-31059936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059936
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059936
    reference: chr 22
allele count: 2
allele frequency: 1.656973372437905e-5
allele num: 120702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.55G>A
  hgvsp: ENSP00000384946.1:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.55G>A
  hgvsp: ENSP00000385463.1:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1544C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.55G>A
  hgvsp: ENSP00000386063.1:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2858G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.55G>A
  hgvsp: ENSP00000366291.3:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.55G>A
  hgvsp: ENSP00000333917.3:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.55G>A
  hgvsp: ENSP00000340795.4:p.Gly19Ser
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7522
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly19Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

22-31059937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059937
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059937
    reference: chr 22
allele count: 2
allele frequency: 1.658704883227176e-5
allele num: 120576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2857C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.54C>T
  hgvsp: ENST00000342474.4:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.54C>T
  hgvsp: ENST00000407308.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.54C>T
  hgvsp: ENST00000404885.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.54C>T
  hgvsp: ENST00000403268.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.54C>T
  hgvsp: ENST00000377087.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1543G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.54C>T
  hgvsp: ENST00000334679.3:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser18Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-31059943-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059943
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059943
    reference: chr 22
allele count: 1
allele frequency: 8.321405984755183e-6
allele num: 120172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.48A>C
  hgvsp: ENST00000404885.1:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1537T>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.48A>C
  hgvsp: ENST00000377087.3:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.48A>C
  hgvsp: ENST00000403268.1:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.48A>C
  hgvsp: ENST00000342474.4:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.48A>C
  hgvsp: ENST00000407308.1:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.48A>C
  hgvsp: ENST00000334679.3:c.48A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2851A>C
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45612
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser16Ser
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

22-31059951-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059951
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059951
    reference: chr 22
allele count: 8
allele frequency: 6.706908115358819e-5
allele num: 119280
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.40C>T
  hgvsp: ENSP00000340795.4:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.40C>T
  hgvsp: ENSP00000385463.1:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.40C>T
  hgvsp: ENSP00000366291.3:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.40C>T
  hgvsp: ENSP00000386063.1:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.40C>T
  hgvsp: ENSP00000384946.1:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.40C>T
  hgvsp: ENSP00000333917.3:p.Gln14Ter
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2843C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1529G>A
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln14Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

22-31059953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059953
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059953
    reference: chr 22
allele count: 4
allele frequency: 3.364058400053825e-5
allele num: 118904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1527C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2841G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.38G>A
  hgvsp: ENSP00000384946.1:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.38G>A
  hgvsp: ENSP00000340795.4:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.38G>A
  hgvsp: ENSP00000386063.1:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.38G>A
  hgvsp: ENSP00000366291.3:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.38G>A
  hgvsp: ENSP00000333917.3:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.38G>A
  hgvsp: ENSP00000385463.1:p.Arg13Gln
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44213
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg13Gln
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

22-31059954-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059954
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059954
    reference: chr 22
allele count: 3
allele frequency: 2.524275112330242e-5
allele num: 118846
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.37C>T
  hgvsp: ENSP00000384946.1:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.37C>T
  hgvsp: ENSP00000386063.1:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.37C>T
  hgvsp: ENSP00000385463.1:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1526G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.37C>T
  hgvsp: ENSP00000366291.3:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.37C>T
  hgvsp: ENSP00000333917.3:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2840C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.37C>T
  hgvsp: ENSP00000340795.4:p.Arg13Trp
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg13Trp
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

22-31059955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059955
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059955
    reference: chr 22
allele count: 1
allele frequency: 8.437252155717926e-6
allele num: 118522
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.36C>T
  hgvsp: ENST00000404885.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.36C>T
  hgvsp: ENST00000407308.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2839C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.36C>T
  hgvsp: ENST00000403268.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1525G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.36C>T
  hgvsp: ENST00000334679.3:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.36C>T
  hgvsp: ENST00000342474.4:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.36C>T
  hgvsp: ENST00000377087.3:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2612
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe12Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

22-31059958-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059958
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059958
    reference: chr 22
allele count: 9
allele frequency: 7.614084364054754e-5
allele num: 118202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1522C>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.33G>C
  hgvsp: ENSP00000386063.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.33G>C
  hgvsp: ENSP00000340795.4:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.33G>C
  hgvsp: ENSP00000384946.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2836G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.33G>C
  hgvsp: ENSP00000385463.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.33G>C
  hgvsp: ENSP00000403378.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.33G>C
  hgvsp: ENSP00000333917.3:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.33G>C
  hgvsp: ENSP00000366291.3:p.Gln11His
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20197
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln11His
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS

22-31059958-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059958
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059958
    reference: chr 22
allele count: 1
allele frequency: 8.460093737838614e-6
allele num: 118202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.33G>A
  hgvsp: ENST00000404885.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.33G>A
  hgvsp: ENST00000442752.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.33G>A
  hgvsp: ENST00000407308.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1522C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.33G>A
  hgvsp: ENST00000342474.4:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.33G>A
  hgvsp: ENST00000334679.3:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2836G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.33G>A
  hgvsp: ENST00000403268.1:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.33G>A
  hgvsp: ENST00000377087.3:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln11Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/22-31059963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059963
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059963
    reference: chr 22
allele count: 1
allele frequency: 8.540001366400219e-6
allele num: 117096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.28G>T
  hgvsp: ENSP00000386063.1:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.28G>T
  hgvsp: ENSP00000340795.4:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.28G>T
  hgvsp: ENSP00000366291.3:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.28G>T
  hgvsp: ENSP00000384946.1:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.28G>T
  hgvsp: ENSP00000333917.3:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.28G>T
  hgvsp: ENSP00000385463.1:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1517C>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.28G>T
  hgvsp: ENSP00000403378.1:p.Val10Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2831G>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7059
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6732
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val10Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-31059964-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059964
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059964
    reference: chr 22
allele count: 1
allele frequency: 8.565603960735272e-6
allele num: 116746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.27A>G
  hgvsp: ENST00000442752.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.27A>G
  hgvsp: ENST00000334679.3:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.27A>G
  hgvsp: ENST00000407308.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2830A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.27A>G
  hgvsp: ENST00000403268.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1516T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.27A>G
  hgvsp: ENST00000377087.3:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.27A>G
  hgvsp: ENST00000342474.4:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.27A>G
  hgvsp: ENST00000404885.1:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro9Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

22-31059965-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059965
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059965
    reference: chr 22
allele count: 1
allele frequency: 8.587966541282354e-6
allele num: 116442
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.26C>T
  hgvsp: ENSP00000333917.3:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.26C>T
  hgvsp: ENSP00000403378.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.26C>T
  hgvsp: ENSP00000386063.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.26C>T
  hgvsp: ENSP00000340795.4:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2829C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.26C>T
  hgvsp: ENSP00000366291.3:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.26C>T
  hgvsp: ENSP00000385463.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.26C>T
  hgvsp: ENSP00000384946.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1515G>A
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4790
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro9Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

22-31059967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059967
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059967
    reference: chr 22
allele count: 3
allele frequency: 2.618257985686856e-5
allele num: 114580
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.24C>T
  hgvsp: ENST00000407308.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2827C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.24C>T
  hgvsp: ENST00000342474.4:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.24C>T
  hgvsp: ENST00000403268.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.24C>T
  hgvsp: ENST00000334679.3:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1513G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.24C>T
  hgvsp: ENST00000377087.3:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.24C>T
  hgvsp: ENST00000404885.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.24C>T
  hgvsp: ENST00000442752.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Phe8Phe
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

22-31059968-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059968
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059968
    reference: chr 22
allele count: 2
allele frequency: 1.746023431634452e-5
allele num: 114546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1512A>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.23T>C
  hgvsp: ENSP00000385463.1:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.23T>C
  hgvsp: ENSP00000386063.1:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2826T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.23T>C
  hgvsp: ENSP00000384946.1:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.23T>C
  hgvsp: ENSP00000403378.1:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.23T>C
  hgvsp: ENSP00000333917.3:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.23T>C
  hgvsp: ENSP00000366291.3:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.23T>C
  hgvsp: ENSP00000340795.4:p.Phe8Ser
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe8Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

22-31059969-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059969
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059969
    reference: chr 22
allele count: 1
allele frequency: 8.778706369829343e-6
allele num: 113912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.22T>C
  hgvsp: ENSP00000386063.1:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2825T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.22T>C
  hgvsp: ENSP00000403378.1:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.22T>C
  hgvsp: ENSP00000385463.1:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.22T>C
  hgvsp: ENSP00000384946.1:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.22T>C
  hgvsp: ENSP00000366291.3:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.22T>C
  hgvsp: ENSP00000333917.3:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.22T>C
  hgvsp: ENSP00000340795.4:p.Phe8Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1511A>G
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37804
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe8Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-31059974-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059974
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059974
    reference: chr 22
allele count: 2
allele frequency: 1.777619767131811e-5
allele num: 112510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2820G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.17G>T
  hgvsp: ENSP00000366291.3:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.17G>T
  hgvsp: ENSP00000340795.4:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.17G>T
  hgvsp: ENSP00000384946.1:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.17G>T
  hgvsp: ENSP00000333917.3:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.17G>T
  hgvsp: ENSP00000403378.1:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1506C>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.17G>T
  hgvsp: ENSP00000385463.1:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.17G>T
  hgvsp: ENSP00000386063.1:p.Cys6Phe
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys6Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

22-31059974-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059974
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059974
    reference: chr 22
allele count: 7
allele frequency: 6.221669184961337e-5
allele num: 112510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.17G>A
  hgvsp: ENSP00000386063.1:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.17G>A
  hgvsp: ENSP00000403378.1:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.17G>A
  hgvsp: ENSP00000366291.3:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.17G>A
  hgvsp: ENSP00000333917.3:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2820G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.17G>A
  hgvsp: ENSP00000385463.1:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1506C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.17G>A
  hgvsp: ENSP00000384946.1:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.17G>A
  hgvsp: ENSP00000340795.4:p.Cys6Tyr
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17121
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys6Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS

22-31059976-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059976
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059976
    reference: chr 22
allele count: 1
allele frequency: 8.915516565029779e-6
allele num: 112164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.15G>A
  hgvsp: ENST00000377087.3:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.15G>A
  hgvsp: ENST00000442752.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.15G>A
  hgvsp: ENST00000342474.4:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.15G>A
  hgvsp: ENST00000404885.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2818G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1504C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.15G>A
  hgvsp: ENST00000403268.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.15G>A
  hgvsp: ENST00000407308.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.15G>A
  hgvsp: ENST00000334679.3:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser5Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-31059977-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059977
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059977
    reference: chr 22
allele count: 4
allele frequency: 3.576473954328428e-5
allele num: 111842
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.14C>T
  hgvsp: ENSP00000366291.3:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2817C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.14C>T
  hgvsp: ENSP00000403378.1:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.14C>T
  hgvsp: ENSP00000333917.3:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.14C>T
  hgvsp: ENSP00000386063.1:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.14C>T
  hgvsp: ENSP00000340795.4:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1503G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.14C>T
  hgvsp: ENSP00000385463.1:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.14C>T
  hgvsp: ENSP00000384946.1:p.Ser5Leu
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5612
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22085
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser5Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

22-31059985-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059985
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059985
    reference: chr 22
allele count: 1
allele frequency: 9.238728750923873e-6
allele num: 108240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2809A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1495T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.6A>G
  hgvsp: ENST00000403268.1:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.6A>G
  hgvsp: ENST00000404885.1:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.6A>G
  hgvsp: ENST00000334679.3:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.6A>G
  hgvsp: ENST00000442752.1:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.6A>G
  hgvsp: ENST00000342474.4:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.6A>G
  hgvsp: ENST00000407308.1:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.6A>G
  hgvsp: ENST00000377087.3:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14011
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr2Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

22-31059990-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059990
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059990
    reference: chr 22
allele count: 1
allele frequency: 9.46181212625842e-6
allele num: 105688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2804A>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.1A>T
  hgvsp: ENSP00000333917.3:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.1A>T
  hgvsp: ENSP00000340795.4:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.1A>T
  hgvsp: ENSP00000386063.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.1A>T
  hgvsp: ENSP00000385463.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.1A>T
  hgvsp: ENSP00000403378.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.1A>T
  hgvsp: ENSP00000384946.1:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.1A>T
  hgvsp: ENSP00000366291.3:p.Met1?
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1490T>A
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

22-31059994-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059994
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059994
    reference: chr 22
allele count: 2
allele frequency: 1.925150161712613e-5
allele num: 103888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1486G>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-4C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2800C>G
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10797
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

22-31059996-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059996
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059996
    reference: chr 22
allele count: 2
allele frequency: 1.94829232177996e-5
allele num: 102654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2798G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1484C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-6G>A
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19765
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

22-31059997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059997
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059997
    reference: chr 22
allele count: 1
allele frequency: 9.792209318266388e-6
allele num: 102122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2797C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1483G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-7C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21852
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3630
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19503
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

22-31059999-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059999
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059999
    reference: chr 22
allele count: 4
allele frequency: 3.945862762893107e-5
allele num: 101372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-9A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1481T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2795A>G
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

22-31059999-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31059999
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31059998
    reference: chr 22
allele count: 1
allele frequency: 9.864656907232767e-6
allele num: 101372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2794delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1478delG
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-10delC
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: TG
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

22-31060000-G-GGGTCAGCGGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060000
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060011
    reference: chr 22
allele count: 1
allele frequency: 9.901774397972116e-6
allele num: 100992
alternate allele: GGGTCAGCGGTT
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

22-31060003-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060003
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060003
    reference: chr 22
allele count: 2
allele frequency: 2.011627205246324e-5
allele num: 99422
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1477T>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-13A>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2791A>G
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7191
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15194
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

22-31060015-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060015
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060015
    reference: chr 22
allele count: 1
allele frequency: 1.108303409141286e-5
allele num: 90228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2779T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1465A>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-25T>C
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6267
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

22-31060021-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060021
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060021
    reference: chr 22
allele count: 2
allele frequency: 2.440333837668993e-5
allele num: 81956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-31G>A
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1459C>T
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2773G>A
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23111
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

22-31060022-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060022
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060022
    reference: chr 22
allele count: 1
allele frequency: 1.225129863765559e-5
allele num: 81624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2772C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1458G>A
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14563
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23045
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5488
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3676
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

22-31060025-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060025
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060025
    reference: chr 22
allele count: 1
allele frequency: 1.250625312656328e-5
allele num: 79960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2769C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1455G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-35C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9406
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22522
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21745
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

22-31060027-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060027
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060027
    reference: chr 22
allele count: 1
allele frequency: 1.303746968788298e-5
allele num: 76702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2767T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1453A>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-37T>C
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

22-31060029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060029
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060029
    reference: chr 22
allele count: 5
allele frequency: 6.773415698068222e-5
allele num: 73818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2765C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1451G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-39C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21226
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17156
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

22-31060029-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060029
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060029
    reference: chr 22
allele count: 28867
allele frequency: 3.910563819122707e-1
allele num: 73818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1451G>C
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-39C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2765C>G
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 992
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 2.5e0
  variant carriers: 567
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 17156
  bin: 7.5e0
  variant carriers: 7742
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.75e1
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 21226
  bin: 1.25e1
  variant carriers: 11346
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 550
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 9.75e1
  variant carriers: 434
genotype depth: GenotypeDepth
  all individuals: 9263
  bin: 1.75e1
  variant carriers: 6299
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.75e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 2.25e1
  variant carriers: 2496
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.25e1
  variant carriers: 277
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 2.5e0
  variant carriers: 133
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 7.5e0
  variant carriers: 322
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 4.75e1
  variant carriers: 835
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 9.25e1
  variant carriers: 749
genotype quality: GenotypeQuality
  all individuals: 1976
  bin: 1.25e1
  variant carriers: 393
num of homozygotes: 5911
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-31060038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31060038
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31060038
    reference: chr 22
allele count: 2
allele frequency: 3.646042221168921e-5
allele num: 54854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-1442G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-48C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+2756C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24224
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/22-31061438-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061438
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061438
    reference: chr 22
allele count: 1
allele frequency: 6.318716036901302e-5
allele num: 15826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1356G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-330G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1371G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1371G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1356G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1371G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1371G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1356G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-42C>A
  variant of: http://identifiers.org/hgnc/17058
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3217
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-31061444-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061444
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061444
    reference: chr 22
allele count: 1
allele frequency: 6.293266205160478e-5
allele num: 15890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1377G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-336G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1377G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1377G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1350G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1350G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1350G>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-36C>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1377G>T
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-31061456-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061456
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061456
    reference: chr 22
allele count: 1
allele frequency: 6.232859636000998e-5
allele num: 16044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1389A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-348A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1389A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.548-24T>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1389A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1338A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1338A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1389A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1338A>C
  variant of: http://identifiers.org/hgnc/18484
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

22-31061498-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061498
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061498
    reference: chr 22
allele count: 1
allele frequency: 6.105006105006105e-5
allele num: 16380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1296G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1296G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-390G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1296G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1431G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1431G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1431G>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.566C>G
  hgvsp: ENSP00000413552.1:p.Ser189Ter
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1431G>C
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser189Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

22-31061504-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061504
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061504
    reference: chr 22
allele count: 1
allele frequency: 6.098304671301378e-5
allele num: 16398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1437T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-396T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.572A>G
  hgvsp: ENSP00000413552.1:p.Glu191Gly
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1437T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1290T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1437T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1290T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1437T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1290T>C
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5877
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu191Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

22-31061506-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061506
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061506
    reference: chr 22
allele count: 595
allele frequency: 3.62539605166951e-2
allele num: 16412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1288C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1439C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.574G>C
  hgvsp: ENSP00000413552.1:p.Asp192His
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1439C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1288C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1439C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-398C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1288C>G
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1439C>G
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp192His
num of homozygotes: 13
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

22-31061521-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061521
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061521
    reference: chr 22
allele count: 374
allele frequency: 2.284387979477156e-2
allele num: 16372
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1454T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1273T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1454T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1273T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1454T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1273T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.589A>G
  hgvsp: ENSP00000413552.1:p.Arg197Gly
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-413T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1454T>C
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 2.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5742
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 2
hgvs: p.Arg197Gly
num of homozygotes: 10
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

22-31061547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061547
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061547
    reference: chr 22
allele count: 1
allele frequency: 6.181998021760633e-5
allele num: 16176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1480C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1247C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1480C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1480C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1247C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.*2+1G>A
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-439C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1480C>T
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1247C>T
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
hgvs: c.*2+1G>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

22-31061549-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061549
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061549
    reference: chr 22
allele count: 1
allele frequency: 6.195786864931847e-5
allele num: 16140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1245T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1245T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1482T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-441T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1482T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1482T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.*2+3A>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1245T>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1482T>C
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5514
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
hgvs: c.*2+3A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

22-31061552-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31061552
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31061552
    reference: chr 22
allele count: 6
allele frequency: 3.723470274295643e-4
allele num: 16114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000384946
  ensembl transcript: ENST00000403268
  gene symbol: DUSP18
  hgvsc: ENST00000403268.1:c.-77-1485A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000386063
  ensembl transcript: ENST00000407308
  gene symbol: DUSP18
  hgvsc: ENST00000407308.1:c.-78+1242A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000340795
  ensembl transcript: ENST00000342474
  gene symbol: DUSP18
  hgvsc: ENST00000342474.4:c.-244-444A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000403378
  ensembl transcript: ENST00000442752
  gene symbol: DUSP18
  hgvsc: ENST00000442752.1:c.-78+1242A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000333917
  ensembl transcript: ENST00000334679
  gene symbol: DUSP18
  hgvsc: ENST00000334679.3:c.-77-1485A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100036
  ensembl protein: ENSP00000413552
  ensembl transcript: ENST00000451479
  gene symbol: SLC35E4
  hgvsc: ENST00000451479.1:c.*2+6T>G
  variant of: http://identifiers.org/hgnc/17058
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000366291
  ensembl transcript: ENST00000377087
  gene symbol: DUSP18
  hgvsc: ENST00000377087.3:c.-77-1485A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl transcript: ENST00000461301
  gene symbol: DUSP18
  hgvsc: ENST00000461301.1:n.558+1242A>C
  variant of: http://identifiers.org/hgnc/18484
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000167065
  ensembl protein: ENSP00000385463
  ensembl transcript: ENST00000404885
  gene symbol: DUSP18
  hgvsc: ENST00000404885.1:c.-77-1485A>C
  variant of: http://identifiers.org/hgnc/18484
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 9.75e1
  variant carriers: 6
hgvs: c.*2+6T>G
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-31090003-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090003
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090003
    reference: chr 22
allele count: 4
allele frequency: 2.401536983669548e-4
allele num: 16656
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.-45A>G
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.-45A>G
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3667
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 4
  allele frequency: 5.23149359142035e-4
  allele num: 7646
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

22-31090039-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090039
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090039
    reference: chr 22
allele count: 1
allele frequency: 6.210408644888833e-5
allele num: 16102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.-9T>G
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.-9T>G
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3632
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 442
  num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

22-31090042-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090042
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090042
    reference: chr 22
allele count: 2
allele frequency: 1.256597134958532e-4
allele num: 15916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.-6G>A
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.-6G>A
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3629
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 196
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum

22-31090052-A-ACAGACAGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090052
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090061
    reference: chr 22
allele count: 39
allele frequency: 2.697841726618705e-3
allele num: 14456
alternate allele: ACAGACAGGT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.6_12+2dupCAGACAGGT
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.6_12+2dupCAGACAGGT
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3579
  bin: 9.75e1
  variant carriers: 42
num of homozygotes: 0
population: African
  type: Population
  allele count: 38
  allele frequency: 6.050955414012739e-2
  allele num: 628
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

22-31090067-T-TCCACAACTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090067
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090076
    reference: chr 22
allele count: 6687
allele frequency: 3.948393953708078e-1
allele num: 16936
alternate allele: TCCACAACTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.5e0
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.75e1
  variant carriers: 410
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.75e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.25e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 2.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.25e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.25e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 408
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.75e1
  variant carriers: 369
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 5.75e1
  variant carriers: 392
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 347
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 312
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 7.5e0
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 6.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 6.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 7488
  bin: 9.75e1
  variant carriers: 4882
num of homozygotes: 1453
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

22-31090076-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090076
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090076
    reference: chr 22
allele count: 1
allele frequency: 7.432733759476735e-5
allele num: 13454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.12+17G>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.12+17G>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-131G>T
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3636
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

22-31090077-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090077
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090077
    reference: chr 22
allele count: 1
allele frequency: 5.863039399624765e-5
allele num: 17056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.12+18C>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.12+18C>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-130C>T
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4861
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

22-31090099-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090099
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090099
    reference: chr 22
allele count: 2
allele frequency: 1.189343482397717e-4
allele num: 16816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.12+40C>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-108C>T
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.12+40C>T
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4134
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ

22-31090103-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090103
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090103
    reference: chr 22
allele count: 1
allele frequency: 5.965875193890944e-5
allele num: 16762
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.12+44G>A
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-104G>A
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.12+44G>A
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4135
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

22-31090151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090151
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090151
    reference: chr 22
allele count: 1
allele frequency: 6.155361319709468e-5
allele num: 16246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.13-44A>G
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.13-44A>G
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

22-31090164-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090164
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090164
    reference: chr 22
allele count: 15
allele frequency: 9.282178217821782e-4
allele num: 16160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-43G>C
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.13-31G>C
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.13-31G>C
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5005
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ

22-31090179-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31090179
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 31090179
    reference: chr 22
allele count: 3
allele frequency: 1.861042183622829e-4
allele num: 16120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000411052
  ensembl transcript: ENST00000438716
  gene symbol: OSBP2
  hgvsc: ENST00000438716.1:c.13-16T>C
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000384213
  ensembl transcript: ENST00000403222
  gene symbol: OSBP2
  hgvsc: ENST00000403222.3:c.13-16T>C
  variant of: http://identifiers.org/hgnc/8504
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000184792
  ensembl protein: ENSP00000385237
  ensembl transcript: ENST00000407373
  gene symbol: OSBP2
  hgvsc: ENST00000407373.1:c.-28T>C
  variant of: http://identifiers.org/hgnc/8504
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1721
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
reference allele: T

GenotypeQuality
all individuals: 1323
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

MQRankSum
type: SiteQuality
SIO_000300: -3.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

DP
type: SiteQuality
SIO_000300: 1.616619e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.529e1

DP
type: SiteQuality
SIO_000300: 1.616604e6

MQ
type: SiteQuality
SIO_000300: 5.854e1

MQRankSum
type: SiteQuality
SIO_000300: 8.35e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.271088513981974e-3
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.03e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

DP
type: SiteQuality
SIO_000300: 1.618402e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7651
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

FS
type: SiteQuality
SIO_000300: 2.489e0

DP
type: SiteQuality
SIO_000300: 1.616699e6

VQSLOD
type: SiteQuality
SIO_000300: 3.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.463e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1311
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variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 2.533e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.382e0

QD
type: SiteQuality
SIO_000300: 1.697e1

DP
type: SiteQuality
SIO_000300: 1.616268e6

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.905e1

VQSLOD
type: SiteQuality
SIO_000300: -8.88e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

DP
type: SiteQuality
SIO_000300: 1.616087e6

FS
type: SiteQuality
SIO_000300: 3.352e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.542701393095094e-4
allele num: 6604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.38e1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

FS
type: SiteQuality
SIO_000300: 6.638e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 1.615447e6

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.067e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 4.874e0

DP
type: SiteQuality
SIO_000300: 1.614647e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.141e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1573
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GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.874e0

BaseQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.614647e6

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 1308
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1814
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.117e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.173e0

DP
type: SiteQuality
SIO_000300: 1.613176e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

QD
type: SiteQuality
SIO_000300: 1.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501231009427731e-5
allele num: 66612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.25e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.394e0

MQRankSum
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SIO_000300: 1.57e0

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -3.059e0

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

MQ
type: SiteQuality
SIO_000300: 6.006e1

DP
type: SiteQuality
SIO_000300: 1.611148e6

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeQuality
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variant carriers: 32

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 27
allele frequency: 3.140995812005584e-3
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.823461315840247e-4
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

FS
type: SiteQuality
SIO_000300: 7.75e-1

DP
type: SiteQuality
SIO_000300: 1.611148e6

QD
type: SiteQuality
SIO_000300: 1.413e1

VQSLOD
type: SiteQuality
SIO_000300: 4.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.006e1

GenotypeQuality
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GenotypeQuality
all individuals: 1302
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333177788147457e-4
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 1.466e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.098e0

FS
type: SiteQuality
SIO_000300: 2.602e0

DP
type: SiteQuality
SIO_000300: 1.604528e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1541
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508159140952553e-5
allele num: 66306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.237e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.175e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.173158141717503e-4
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

DP
type: SiteQuality
SIO_000300: 1.594487e6

GenotypeQuality
all individuals: 44640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 239
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.065384147083891e-4
allele num: 65704
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.800078400627205e-5
allele num: 10204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.261e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 242
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GenotypeQuality
all individuals: 1287
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.949852507374631e-4
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526391305675123e-5
allele num: 65514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

FS
type: SiteQuality
SIO_000300: 3.027e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

DP
type: SiteQuality
SIO_000300: 1.572433e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188777936281503e-4
allele num: 8412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526904049349539e-5
allele num: 65492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83477576711251e-5
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.795e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 2.468e0

VQSLOD
type: SiteQuality
SIO_000300: 2.84e-1

QD
type: SiteQuality
SIO_000300: 1.373e1

DP
type: SiteQuality
SIO_000300: 1.57201e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.922198429693076e-5
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 1.564198e6

QD
type: SiteQuality
SIO_000300: 1.528e1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 2.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.65e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.570845114671693e-4
allele num: 6366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.227747084100675e-4
allele num: 65160
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

QD
type: SiteQuality
SIO_000300: 1.338e1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

DP
type: SiteQuality
SIO_000300: 1.557874e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

FS
type: SiteQuality
SIO_000300: 2.909e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534683855125844e-5
allele num: 65160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.338e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 2.909e0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

DP
type: SiteQuality
SIO_000300: 1.557874e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16000
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10022
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547556408431087e-5
allele num: 64618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.914e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.269592476489028e-5
allele num: 15950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6284
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 1.529364e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 1.394e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6266
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.555258328408349e-5
allele num: 64298
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DP
type: SiteQuality
SIO_000300: 1.522461e6

FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.86e-1

MQRankSum
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 207
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.034174125305126e-4
allele num: 9832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63336
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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South Asian
type: Population
allele count: 1
allele frequency: 6.369426751592356e-5
allele num: 15700
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VQSLOD
type: SiteQuality
SIO_000300: 1.04e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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QD
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele count: 2
allele frequency: 2.035830618892508e-4
allele num: 9824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.479404e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e0

QD
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SIO_000300: 1.687e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 9.534706331045004e-5
allele num: 10488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15644
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62978
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.625e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -7.25e-1

MQRankSum
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QD
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SIO_000300: 1.603e1

InbreedingCoeff
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SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.254e-1

DP
type: SiteQuality
SIO_000300: 1.463268e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.06e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.211922656902422e-5
allele num: 62268
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 6.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.98e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.328e0

DP
type: SiteQuality
SIO_000300: 1.427199e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15474
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.219471947194719e-4
allele num: 9696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62268
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.427199e6

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.328e0

QD
type: SiteQuality
SIO_000300: 1.075e1

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

FS
type: SiteQuality
SIO_000300: 6.81e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.609321188322765e-5
allele num: 62138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.202e-1

FS
type: SiteQuality
SIO_000300: 6.673e0

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

DP
type: SiteQuality
SIO_000300: 1.417439e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

QD
type: SiteQuality
SIO_000300: 1.573e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.500260010400417e-5
allele num: 15384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613944480309878e-5
allele num: 61960
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.538715410002539e-4
allele num: 7878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 3.703e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

DP
type: SiteQuality
SIO_000300: 1.40666e6

VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

QD
type: SiteQuality
SIO_000300: 1.241e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.704210244033253e-5
allele num: 14916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.026e1

DP
type: SiteQuality
SIO_000300: 1.309004e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703577512776831e-5
allele num: 58700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
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InbreedingCoeff
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QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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VQSLOD
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DP
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 9.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 21880
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.464043231259526e-5
allele num: 57736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14266
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.179904e6

VQSLOD
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.154e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

FS
type: SiteQuality
SIO_000300: 1.781e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeQuality
all individuals: 155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4045
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 1
allele frequency: 7.085163667280714e-5
allele num: 14114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.830161054172767e-4
allele num: 5464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

QD
type: SiteQuality
SIO_000300: 1.511e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

DP
type: SiteQuality
SIO_000300: 1.149964e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
all individuals: 139
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
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GenotypeQuality
all individuals: 1241
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 831
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
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GenotypeQuality
all individuals: 3980
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.111363959607453e-5
allele num: 14062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7172
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.11e-1

DP
type: SiteQuality
SIO_000300: 1.138243e6

VQSLOD
type: SiteQuality
SIO_000300: 4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

QD
type: SiteQuality
SIO_000300: 1.497e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.913e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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GenotypeQuality
all individuals: 23102
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GenotypeQuality
all individuals: 1245
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
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variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.104290991759022e-5
allele num: 56304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

DP
type: SiteQuality
SIO_000300: 1.106035e6

FS
type: SiteQuality
SIO_000300: 3.041e0

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

GenotypeQuality
all individuals: 422
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1237
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GenotypeQuality
all individuals: 3780
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
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variant carriers: 0

GenotypeQuality
all individuals: 152
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GenotypeQuality
all individuals: 293
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variant carriers: 0

GenotypeQuality
all individuals: 192
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variant carriers: 0

GenotypeQuality
all individuals: 17555
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variant carriers: 0

GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 679
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variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.776072747939756e-5
allele num: 56304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 5.919e1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e0

FS
type: SiteQuality
SIO_000300: 3.041e0

DP
type: SiteQuality
SIO_000300: 1.106035e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.05e-1

QD
type: SiteQuality
SIO_000300: 1.301e1

GenotypeQuality
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17855
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variant carriers: 0

GenotypeQuality
all individuals: 1239
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variant carriers: 1

GenotypeQuality
all individuals: 404
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variant carriers: 0

GenotypeQuality
all individuals: 329
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variant carriers: 0

GenotypeQuality
all individuals: 147
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variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56106
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.194244604316547e-5
allele num: 13900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

DP
type: SiteQuality
SIO_000300: 1.104562e6

QD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

GenotypeQuality
all individuals: 341
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24754
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.75e1
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GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6978
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.455604075691412e-4
allele num: 13740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 2.943e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

QD
type: SiteQuality
SIO_000300: 1.049e1

MQRankSum
type: SiteQuality
SIO_000300: 4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

DP
type: SiteQuality
SIO_000300: 1.056761e6

GenotypeQuality
all individuals: 1354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
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GenotypeQuality
all individuals: 6779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5505
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 7.25e1
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GenotypeQuality
all individuals: 3133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1323
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50112
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.560549313358302e-4
allele num: 6408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.933e1

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

DP
type: SiteQuality
SIO_000300: 8.96005e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.96e-1

GenotypeQuality
all individuals: 1238
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
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variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
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GenotypeQuality
all individuals: 442
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GenotypeQuality
all individuals: 6640
bin: 3.25e1
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GenotypeQuality
all individuals: 2529
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
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GenotypeQuality
all individuals: 369
bin: 7.75e1
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GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 853
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.704739174906239e-4
allele num: 5866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.187322280064745e-5
allele num: 45718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4330
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.357e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 8.37873e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.31e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2596
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5677
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6619
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.194618794715358e-5
allele num: 45566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.29e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 8.34094e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

GenotypeQuality
all individuals: 499
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5934
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6667
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3444
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5518
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44634
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.748863238894718e-4
allele num: 5718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.302e0

MQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-1

DP
type: SiteQuality
SIO_000300: 8.23494e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.22e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.393e0

QD
type: SiteQuality
SIO_000300: 4.33e0

GenotypeQuality
all individuals: 364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3364
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6721
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19418
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1553
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4110
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.367989056087551e-4
allele num: 7310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10762
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.12019e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.282e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

GenotypeQuality
all individuals: 1976
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 11195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19568
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 847
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 775
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variant carriers: 0

GenotypeQuality
all individuals: 815
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variant carriers: 0

GenotypeQuality
all individuals: 2271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 548
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2917
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.322073611246705e-5
allele num: 40972
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.767897513187641e-4
allele num: 5308
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

DP
type: SiteQuality
SIO_000300: 8.46244e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.208e-1

QD
type: SiteQuality
SIO_000300: 2.203e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e0

GenotypeQuality
all individuals: 19568
bin: 9.75e1
variant carriers: 19130

GenotypeQuality
all individuals: 847
bin: 4.25e1
variant carriers: 543

GenotypeQuality
all individuals: 452
bin: 7.75e1
variant carriers: 329

GenotypeQuality
all individuals: 2271
bin: 3.75e1
variant carriers: 1183

GenotypeQuality
all individuals: 2917
bin: 2.75e1
variant carriers: 843

GenotypeQuality
all individuals: 775
bin: 5.25e1
variant carriers: 711

GenotypeQuality
all individuals: 11195
bin: 2.25e1
variant carriers: 1294

GenotypeQuality
all individuals: 548
bin: 5.75e1
variant carriers: 496

GenotypeQuality
all individuals: 2360
bin: 1.75e1
variant carriers: 1027

GenotypeQuality
all individuals: 1595
bin: 6.25e1
variant carriers: 603

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 410

GenotypeQuality
all individuals: 668
bin: 6.75e1
variant carriers: 429

GenotypeQuality
all individuals: 605
bin: 8.75e1
variant carriers: 544

GenotypeQuality
all individuals: 3602
bin: 3.25e1
variant carriers: 1390

Latino
type: Population
allele count: 3043
allele frequency: 5.732856066314996e-1
allele num: 5308
num of homozygotes: 832

South Asian
type: Population
allele count: 3585
allele frequency: 3.444465795541891e-1
allele num: 10408
num of homozygotes: 585

European (Finnish)
type: Population
allele count: 1448
allele frequency: 3.739669421487603e-1
allele num: 3872
num of homozygotes: 243

African
type: Population
allele count: 5452
allele frequency: 7.34375e-1
allele num: 7424
num of homozygotes: 1997

East Asian
type: Population
allele count: 2424
allele frequency: 4.597875569044006e-1
allele num: 5272
num of homozygotes: 480

Other
type: Population
allele count: 216
allele frequency: 3.843416370106761e-1
allele num: 562
num of homozygotes: 36

European (Non-Finnish)
type: Population
allele count: 12699
allele frequency: 3.09943375964073e-1
allele num: 40972
num of homozygotes: 1738

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.208e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

DP
type: SiteQuality
SIO_000300: 8.46244e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.68e0

QD
type: SiteQuality
SIO_000300: 2.203e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

GenotypeQuality
all individuals: 1127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9556
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 450
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
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variant carriers: 0

GenotypeQuality
all individuals: 7302
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variant carriers: 0

GenotypeQuality
all individuals: 17008
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5253
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variant carriers: 0

GenotypeQuality
all individuals: 182
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variant carriers: 0

GenotypeQuality
all individuals: 5868
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 6.863417982155113e-4
allele num: 2914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2998
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

DP
type: SiteQuality
SIO_000300: 7.11138e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.23e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

QD
type: SiteQuality
SIO_000300: 1.343e1

GenotypeQuality
all individuals: 794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.25e1
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GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
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GenotypeQuality
all individuals: 372
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 7.5e0
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GenotypeQuality
all individuals: 590
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
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variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.357220412595005e-4
allele num: 7368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5068
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.83929e5

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.584e0

QD
type: SiteQuality
SIO_000300: 1.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.415e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
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GenotypeQuality
all individuals: 270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.25e1
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GenotypeQuality
all individuals: 157
bin: 9.75e1
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GenotypeQuality
all individuals: 819
bin: 6.75e1
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GenotypeQuality
all individuals: 3939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.347708894878706e-4
allele num: 7420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.746e0

MQRankSum
type: SiteQuality
SIO_000300: -1.161e0

FS
type: SiteQuality
SIO_000300: 2.84e0

DP
type: SiteQuality
SIO_000300: 1.88327e5

QD
type: SiteQuality
SIO_000300: 6.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.32e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.21e-1

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 348
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GenotypeQuality
all individuals: 4897
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GenotypeQuality
all individuals: 106
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GenotypeQuality
all individuals: 145
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GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 158
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GenotypeQuality
all individuals: 77
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GenotypeQuality
all individuals: 278
bin: 3.25e1
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GenotypeQuality
all individuals: 274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.330494944119212e-4
allele num: 7516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.649e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.13e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.97472e5

MQRankSum
type: SiteQuality
SIO_000300: -1.606e0

VQSLOD
type: SiteQuality
SIO_000300: -1.013e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.13e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.504e1

GenotypeQuality
all individuals: 343
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
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GenotypeQuality
all individuals: 1535
bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.307873397855088e-4
allele num: 7646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.09628e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

QD
type: SiteQuality
SIO_000300: 9.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.85e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 12
bin: 4.25e1
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GenotypeQuality
all individuals: 985
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 170
bin: 2.5e0
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GenotypeQuality
all individuals: 166
bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.892505677517033e-4
allele num: 5284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

FS
type: SiteQuality
SIO_000300: 7.865e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.049e0

VQSLOD
type: SiteQuality
SIO_000300: -1.704e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 7.79e0

DP
type: SiteQuality
SIO_000300: 2.09786e5

GenotypeQuality
all individuals: 129
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 902
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 3.25e1
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GenotypeQuality
all individuals: 23
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variant carriers: 1

GenotypeQuality
all individuals: 137
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variant carriers: 2

GenotypeQuality
all individuals: 5565
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GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.5e0
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GenotypeQuality
all individuals: 729
bin: 9.75e1
variant carriers: 576

GenotypeQuality
all individuals: 68
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variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 128
allele frequency: 2.419659735349717e-2
allele num: 5290
num of homozygotes: 2

Other
type: Population
allele count: 6
allele frequency: 2.912621359223301e-2
allele num: 206
num of homozygotes: 0

South Asian
type: Population
allele count: 398
allele frequency: 5.19989547948785e-2
allele num: 7654
num of homozygotes: 11

African
type: Population
allele count: 5
allele frequency: 5.605381165919282e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.724137931034483e-2
allele num: 290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 53
allele frequency: 3.30423940149626e-2
allele num: 1604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

DP
type: SiteQuality
SIO_000300: 2.25054e5

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 29
bin: 3.75e1
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GenotypeQuality
all individuals: 935
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 231
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 509
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variant carriers: 358

GenotypeQuality
all individuals: 66
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variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 265
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 6.726457399103139e-3
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

South Asian
type: Population
allele count: 67
allele frequency: 8.767338393090815e-3
allele num: 7642
num of homozygotes: 1

Latino
type: Population
allele count: 9
allele frequency: 3.103448275862069e-2
allele num: 290
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 4.368932038834952e-2
allele num: 206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 74
allele frequency: 4.665825977301387e-2
allele num: 1586
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 209
allele frequency: 3.955336866010598e-2
allele num: 5284
num of homozygotes: 4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.18726e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.227e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
all individuals: 197
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 1643
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GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 388
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GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 122
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GenotypeQuality
all individuals: 5642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
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variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.315097317201473e-4
allele num: 7604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.227e0

QD
type: SiteQuality
SIO_000300: 1.241e1

FS
type: SiteQuality
SIO_000300: 2.814e0

VQSLOD
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 2.07923e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.53e-1

MQ
type: SiteQuality
SIO_000300: 5.915e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.05e-1

GenotypeQuality
all individuals: 452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1635
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GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
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GenotypeQuality
all individuals: 258
bin: 7.25e1
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GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 63
bin: 9.25e1
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 172
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variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.913509376195943e-4
allele num: 5226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.409e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.265e0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.06377e5

GenotypeQuality
all individuals: 5426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
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GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1482
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 7.923930269413629e-4
allele num: 7572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5222
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

QD
type: SiteQuality
SIO_000300: 1.355e1

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.84e-2

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: 5.87e-1

FS
type: SiteQuality
SIO_000300: 2.008e0

DP
type: SiteQuality
SIO_000300: 2.05296e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.257e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

DP
type: SiteQuality
SIO_000300: 3.98809e5

QD
type: SiteQuality
SIO_000300: 1.076e1

MQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.896094046264695e-4
allele num: 5274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.12871e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

FS
type: SiteQuality
SIO_000300: 1.353e0

QD
type: SiteQuality
SIO_000300: 5.34e0

VQSLOD
type: SiteQuality
SIO_000300: -1.674e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.08e-1

MQ
type: SiteQuality
SIO_000300: 5.575e1

MQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.865481252415926e-4
allele num: 5174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.881e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

DP
type: SiteQuality
SIO_000300: 4.14668e5

MQ
type: SiteQuality
SIO_000300: 5.365e1

FS
type: SiteQuality
SIO_000300: 1.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.213368747233289e-4
allele num: 4518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-2

QD
type: SiteQuality
SIO_000300: 3.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 4.033e1

FS
type: SiteQuality
SIO_000300: 1.986e0

MQRankSum
type: SiteQuality
SIO_000300: -1.133e0

VQSLOD
type: SiteQuality
SIO_000300: 5.71e-1

DP
type: SiteQuality
SIO_000300: 4.30095e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

African
type: Population
allele count: 598
allele frequency: 6.674107142857143e-1
allele num: 896
num of homozygotes: 201

European (Non-Finnish)
type: Population
allele count: 2859
allele frequency: 4.956657420249653e-1
allele num: 5768
num of homozygotes: 690

Other
type: Population
allele count: 87
allele frequency: 4.103773584905661e-1
allele num: 212
num of homozygotes: 17

East Asian
type: Population
allele count: 28
allele frequency: 6.167400881057269e-2
allele num: 454
num of homozygotes: 0

South Asian
type: Population
allele count: 2324
allele frequency: 3.04029304029304e-1
allele num: 7644
num of homozygotes: 381

Latino
type: Population
allele count: 84
allele frequency: 2.978723404255319e-1
allele num: 282
num of homozygotes: 12

European (Finnish)
type: Population
allele count: 707
allele frequency: 4.208333333333333e-1
allele num: 1680
num of homozygotes: 152

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -5.228e0

DP
type: SiteQuality
SIO_000300: 4.81221e5

FS
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 5.007e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.191e-1

QD
type: SiteQuality
SIO_000300: 7.05e0

VQSLOD
type: SiteQuality
SIO_000300: -6.325e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 8.025682182985554e-4
allele num: 1246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.537e0

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.81e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 1.146e0

MQ
type: SiteQuality
SIO_000300: 5.83e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 4.56142e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.965e0

GenotypeQuality
all individuals: 150
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.075268817204301e-3
allele num: 930
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.59092e5

MQRankSum
type: SiteQuality
SIO_000300: -3.016e0

FS
type: SiteQuality
SIO_000300: 2.276e0

MQ
type: SiteQuality
SIO_000300: 4.824e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

QD
type: SiteQuality
SIO_000300: 1.497e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

VQSLOD
type: SiteQuality
SIO_000300: -1.981e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5670
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.613012803762738e-4
allele num: 7654
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.606e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.508e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.184e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 3.277e1

DP
type: SiteQuality
SIO_000300: 4.42908e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 1118
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.77430801987225e-4
allele num: 5636
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.42e-2

DP
type: SiteQuality
SIO_000300: 4.42984e5

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.38e0

MQ
type: SiteQuality
SIO_000300: 5.787e1

FS
type: SiteQuality
SIO_000300: 9.818e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.67e0

QD
type: SiteQuality
SIO_000300: 1.361e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.65e-1

GenotypeQuality
all individuals: 4987
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.30890052356021e-4
allele num: 7640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.154e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.47e-2

FS
type: SiteQuality
SIO_000300: 5.795e0

DP
type: SiteQuality
SIO_000300: 2.44861e5

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

QD
type: SiteQuality
SIO_000300: 1.621e1

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.26e0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.694915254237288e-2
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.90625e-3
allele num: 256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.411e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 2.43772e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 1.102e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

GenotypeQuality
all individuals: 301
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0