22-30950986-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30950986
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30950986
    reference: chr 22
allele count: 4
allele frequency: 3.464943434798427e-5
allele num: 115442
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1226G>C
  hgvsp: ENSP00000385825.1:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1226G>C
  hgvsp: ENSP00000385735.1:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1226G>C
  hgvsp: ENSP00000385207.1:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1226G>C
  hgvsp: ENSP00000402587.2:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1226G>C
  hgvsp: ENSP00000343234.5:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1226G>C
  hgvsp: ENSP00000384388.1:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1226G>C
  hgvsp: ENSP00000384122.1:p.Trp409Ser
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36584
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6157
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp409Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-30950992-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30950992
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30950992
    reference: chr 22
allele count: 1
allele frequency: 8.60540763815982e-6
allele num: 116206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1220A>G
  hgvsp: ENSP00000384122.1:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1220A>G
  hgvsp: ENSP00000385825.1:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1220A>G
  hgvsp: ENSP00000384388.1:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1220A>G
  hgvsp: ENSP00000343234.5:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1220A>G
  hgvsp: ENSP00000385735.1:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1220A>G
  hgvsp: ENSP00000402587.2:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1220A>G
  hgvsp: ENSP00000385207.1:p.Asn407Ser
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn407Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

22-30951005-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951005
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951005
    reference: chr 22
allele count: 6
allele frequency: 5.08457340429138e-5
allele num: 118004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1207G>A
  hgvsp: ENSP00000385207.1:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1207G>A
  hgvsp: ENSP00000402587.2:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1207G>A
  hgvsp: ENSP00000384388.1:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1207G>A
  hgvsp: ENSP00000384122.1:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1207G>A
  hgvsp: ENSP00000343234.5:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1207G>A
  hgvsp: ENSP00000385735.1:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1207G>A
  hgvsp: ENSP00000385825.1:p.Asp403Asn
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp403Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

22-30951011-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951011
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951011
    reference: chr 22
allele count: 1
allele frequency: 8.443949066099234e-6
allele num: 118428
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1201C>T
  hgvsp: ENST00000443111.2:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1201C>T
  hgvsp: ENST00000406955.1:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1201C>T
  hgvsp: ENST00000402321.1:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1201C>T
  hgvsp: ENST00000402369.1:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1201C>T
  hgvsp: ENST00000401975.1:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1201C>T
  hgvsp: ENST00000338911.5:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1201C>T
  hgvsp: ENST00000406361.1:c.1201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6419
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu401Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

22-30951032-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951032
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951032
    reference: chr 22
allele count: 1
allele frequency: 8.402514032198434e-6
allele num: 119012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1180C>A
  hgvsp: ENSP00000385825.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1180C>A
  hgvsp: ENSP00000385207.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1180C>A
  hgvsp: ENSP00000384122.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1180C>A
  hgvsp: ENSP00000384388.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1180C>A
  hgvsp: ENSP00000343234.5:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1180C>A
  hgvsp: ENSP00000385735.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1180C>A
  hgvsp: ENSP00000402587.2:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu394Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

22-30951036-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951036
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951036
    reference: chr 22
allele count: 102
allele frequency: 8.565094719871019e-4
allele num: 119088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1176C>T
  hgvsp: ENST00000401975.1:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1176C>T
  hgvsp: ENST00000402369.1:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1176C>T
  hgvsp: ENST00000406955.1:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1176C>T
  hgvsp: ENST00000402321.1:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1176C>T
  hgvsp: ENST00000406361.1:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1176C>T
  hgvsp: ENST00000443111.2:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1176C>T
  hgvsp: ENST00000338911.5:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 37410
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6475
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Arg392Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

22-30951038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951038
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951038
    reference: chr 22
allele count: 1
allele frequency: 8.397433744247758e-6
allele num: 119084
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1174C>T
  hgvsp: ENSP00000385825.1:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1174C>T
  hgvsp: ENSP00000385207.1:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1174C>T
  hgvsp: ENSP00000384388.1:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1174C>T
  hgvsp: ENSP00000343234.5:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1174C>T
  hgvsp: ENSP00000385735.1:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1174C>T
  hgvsp: ENSP00000402587.2:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1174C>T
  hgvsp: ENSP00000384122.1:p.Arg392Cys
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg392Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

22-30951040-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951040
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951040
    reference: chr 22
allele count: 3
allele frequency: 2.519103199261063e-5
allele num: 119090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1172G>A
  hgvsp: ENSP00000343234.5:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1172G>A
  hgvsp: ENSP00000384122.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1172G>A
  hgvsp: ENSP00000384388.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1172G>A
  hgvsp: ENSP00000402587.2:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1172G>A
  hgvsp: ENSP00000385825.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1172G>A
  hgvsp: ENSP00000385207.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1172G>A
  hgvsp: ENSP00000385735.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6493
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg391Gln
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

22-30951041-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951041
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951041
    reference: chr 22
allele count: 2
allele frequency: 1.679402132840709e-5
allele num: 119090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1171C>T
  hgvsp: ENSP00000385207.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1171C>T
  hgvsp: ENSP00000385825.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1171C>T
  hgvsp: ENSP00000384122.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1171C>T
  hgvsp: ENSP00000385735.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1171C>T
  hgvsp: ENSP00000343234.5:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1171C>T
  hgvsp: ENSP00000402587.2:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1171C>T
  hgvsp: ENSP00000384388.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg391Trp
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

22-30951045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951045
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951045
    reference: chr 22
allele count: 1
allele frequency: 8.395882659143956e-6
allele num: 119106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1167C>T
  hgvsp: ENST00000338911.5:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1167C>T
  hgvsp: ENST00000443111.2:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1167C>T
  hgvsp: ENST00000402369.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1167C>T
  hgvsp: ENST00000406955.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1167C>T
  hgvsp: ENST00000402321.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1167C>T
  hgvsp: ENST00000406361.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1167C>T
  hgvsp: ENST00000401975.1:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6482
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu389Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

22-30951048-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951048
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951048
    reference: chr 22
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1164G>C
  hgvsp: ENSP00000384388.1:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1164G>C
  hgvsp: ENSP00000385825.1:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1164G>C
  hgvsp: ENSP00000384122.1:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1164G>C
  hgvsp: ENSP00000402587.2:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1164G>C
  hgvsp: ENSP00000385735.1:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1164G>C
  hgvsp: ENSP00000385207.1:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1164G>C
  hgvsp: ENSP00000343234.5:p.Gln388His
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln388His
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/22-30951051-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951051
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951051
    reference: chr 22
allele count: 5
allele frequency: 4.200551112305935e-5
allele num: 119032
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1161G>T
  hgvsp: ENST00000402321.1:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1161G>T
  hgvsp: ENST00000406361.1:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1161G>T
  hgvsp: ENST00000338911.5:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1161G>T
  hgvsp: ENST00000401975.1:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1161G>T
  hgvsp: ENST00000406955.1:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1161G>T
  hgvsp: ENST00000402369.1:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1161G>T
  hgvsp: ENST00000443111.2:c.1161G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16736
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala387Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

22-30951054-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951054
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951054
    reference: chr 22
allele count: 1
allele frequency: 8.400961069946402e-6
allele num: 119034
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1158C>T
  hgvsp: ENST00000402321.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1158C>T
  hgvsp: ENST00000406361.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1158C>T
  hgvsp: ENST00000406955.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1158C>T
  hgvsp: ENST00000443111.2:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1158C>T
  hgvsp: ENST00000401975.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1158C>T
  hgvsp: ENST00000402369.1:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1158C>T
  hgvsp: ENST00000338911.5:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His386His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-30951058-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951058
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951058
    reference: chr 22
allele count: 2
allele frequency: 1.681378730559058e-5
allele num: 118950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1154G>C
  hgvsp: ENSP00000343234.5:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1154G>C
  hgvsp: ENSP00000384388.1:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1154G>C
  hgvsp: ENSP00000385735.1:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1154G>C
  hgvsp: ENSP00000385825.1:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1154G>C
  hgvsp: ENSP00000402587.2:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1154G>C
  hgvsp: ENSP00000384122.1:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1154G>C
  hgvsp: ENSP00000385207.1:p.Arg385Pro
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg385Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

22-30951072-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951072
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951072
    reference: chr 22
allele count: 6
allele frequency: 5.049145011444729e-5
allele num: 118832
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1140G>A
  hgvsp: ENST00000402321.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1140G>A
  hgvsp: ENST00000406361.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1140G>A
  hgvsp: ENST00000402369.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1140G>A
  hgvsp: ENST00000401975.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1140G>A
  hgvsp: ENST00000338911.5:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1140G>A
  hgvsp: ENST00000406955.1:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1140G>A
  hgvsp: ENST00000443111.2:c.1140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6482
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys380Lys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

22-30951080-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951080
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951080
    reference: chr 22
allele count: 1
allele frequency: 8.421619982819896e-6
allele num: 118742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1132C>A
  hgvsp: ENSP00000384388.1:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1132C>A
  hgvsp: ENSP00000385735.1:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1132C>A
  hgvsp: ENSP00000343234.5:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1132C>A
  hgvsp: ENSP00000385207.1:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1132C>A
  hgvsp: ENSP00000384122.1:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1132C>A
  hgvsp: ENSP00000402587.2:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1132C>A
  hgvsp: ENSP00000385825.1:p.Leu378Ile
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu378Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

22-30951108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951108
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951108
    reference: chr 22
allele count: 2
allele frequency: 1.701577362214773e-5
allele num: 117538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1104G>A
  hgvsp: ENST00000401975.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1104G>A
  hgvsp: ENST00000402369.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1104G>A
  hgvsp: ENST00000443111.2:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1104G>A
  hgvsp: ENST00000406955.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1104G>A
  hgvsp: ENST00000338911.5:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1104G>A
  hgvsp: ENST00000406361.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1104G>A
  hgvsp: ENST00000402321.1:c.1104G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu368Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

22-30951134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951134
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951134
    reference: chr 22
allele count: 1
allele frequency: 8.601262665359275e-6
allele num: 116262
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1078G>A
  hgvsp: ENSP00000385735.1:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1078G>A
  hgvsp: ENSP00000385825.1:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1078G>A
  hgvsp: ENSP00000402587.2:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1078G>A
  hgvsp: ENSP00000385207.1:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1078G>A
  hgvsp: ENSP00000343234.5:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1078G>A
  hgvsp: ENSP00000384122.1:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1078G>A
  hgvsp: ENSP00000384388.1:p.Glu360Lys
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu360Lys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-30951138-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951138
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951138
    reference: chr 22
allele count: 1
allele frequency: 8.646480017984679e-6
allele num: 115654
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1074G>A
  hgvsp: ENST00000402321.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1074G>A
  hgvsp: ENST00000338911.5:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1074G>A
  hgvsp: ENST00000401975.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1074G>A
  hgvsp: ENST00000406955.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1074G>A
  hgvsp: ENST00000406361.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1074G>A
  hgvsp: ENST00000402369.1:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1074G>A
  hgvsp: ENST00000443111.2:c.1074G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln358Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

22-30951147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951147
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951147
    reference: chr 22
allele count: 1
allele frequency: 8.736218615134625e-6
allele num: 114466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1065C>T
  hgvsp: ENST00000402369.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1065C>T
  hgvsp: ENST00000338911.5:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1065C>T
  hgvsp: ENST00000443111.2:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1065C>T
  hgvsp: ENST00000406955.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1065C>T
  hgvsp: ENST00000402321.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1065C>T
  hgvsp: ENST00000401975.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1065C>T
  hgvsp: ENST00000406361.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala355Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-30951154-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951154
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951154
    reference: chr 22
allele count: 1
allele frequency: 8.788890841975743e-6
allele num: 113780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1058A>C
  hgvsp: ENSP00000384122.1:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1058A>C
  hgvsp: ENSP00000402587.2:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1058A>C
  hgvsp: ENSP00000384388.1:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1058A>C
  hgvsp: ENSP00000385825.1:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1058A>C
  hgvsp: ENSP00000385207.1:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1058A>C
  hgvsp: ENSP00000343234.5:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1058A>C
  hgvsp: ENSP00000385735.1:p.Asp353Ala
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3970
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp353Ala
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

22-30951162-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951162
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951162
    reference: chr 22
allele count: 2
allele frequency: 1.767221574240978e-5
allele num: 113172
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1050C>A
  hgvsp: ENSP00000385735.1:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1050C>A
  hgvsp: ENSP00000402587.2:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1050C>A
  hgvsp: ENSP00000343234.5:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1050C>A
  hgvsp: ENSP00000385825.1:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1050C>A
  hgvsp: ENSP00000384122.1:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1050C>A
  hgvsp: ENSP00000384388.1:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1050C>A
  hgvsp: ENSP00000385207.1:p.His350Gln
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15276
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32043
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4379
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His350Gln
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

22-30951166-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951166
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951166
    reference: chr 22
allele count: 1
allele frequency: 8.856140848064048e-6
allele num: 112916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1046G>A
  hgvsp: ENSP00000384388.1:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1046G>A
  hgvsp: ENSP00000343234.5:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1046G>A
  hgvsp: ENSP00000402587.2:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1046G>A
  hgvsp: ENSP00000384122.1:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1046G>A
  hgvsp: ENSP00000385207.1:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1046G>A
  hgvsp: ENSP00000385825.1:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1046G>A
  hgvsp: ENSP00000385735.1:p.Gly349Asp
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15338
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40834
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly349Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

22-30951168-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951168
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951168
    reference: chr 22
allele count: 2
allele frequency: 1.771353668473447e-5
allele num: 112908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1044G>A
  hgvsp: ENST00000406361.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1044G>A
  hgvsp: ENST00000401975.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1044G>A
  hgvsp: ENST00000406955.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1044G>A
  hgvsp: ENST00000402369.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1044G>A
  hgvsp: ENST00000402321.1:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1044G>A
  hgvsp: ENST00000338911.5:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1044G>A
  hgvsp: ENST00000443111.2:c.1044G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly348Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

22-30951171-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951171
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951171
    reference: chr 22
allele count: 2
allele frequency: 1.773615692951651e-5
allele num: 112764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1041C>T
  hgvsp: ENST00000406955.1:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1041C>T
  hgvsp: ENST00000402369.1:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1041C>T
  hgvsp: ENST00000338911.5:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1041C>T
  hgvsp: ENST00000401975.1:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1041C>T
  hgvsp: ENST00000402321.1:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1041C>T
  hgvsp: ENST00000406361.1:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1041C>T
  hgvsp: ENST00000443111.2:c.1041C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31513
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4984
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp347Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

22-30951174-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951174
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951174
    reference: chr 22
allele count: 2
allele frequency: 1.776482919116733e-5
allele num: 112582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1038C>T
  hgvsp: ENST00000406955.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1038C>T
  hgvsp: ENST00000402369.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1038C>T
  hgvsp: ENST00000443111.2:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1038C>T
  hgvsp: ENST00000402321.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1038C>T
  hgvsp: ENST00000401975.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1038C>T
  hgvsp: ENST00000406361.1:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1038C>T
  hgvsp: ENST00000338911.5:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40838
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile346Ile
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-30951180-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951180
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951180
    reference: chr 22
allele count: 15
allele frequency: 1.334116014728641e-4
allele num: 112434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1032C>T
  hgvsp: ENST00000406361.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1032C>T
  hgvsp: ENST00000443111.2:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1032C>T
  hgvsp: ENST00000406955.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1032C>T
  hgvsp: ENST00000402369.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1032C>T
  hgvsp: ENST00000401975.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1032C>T
  hgvsp: ENST00000338911.5:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1032C>T
  hgvsp: ENST00000402321.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15037
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30747
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5440
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40399
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile344Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-30951182-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951182
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951182
    reference: chr 22
allele count: 32
allele frequency: 2.852965300809529e-4
allele num: 112164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1030A>G
  hgvsp: ENSP00000402587.2:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1030A>G
  hgvsp: ENSP00000384388.1:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1030A>G
  hgvsp: ENSP00000385825.1:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1030A>G
  hgvsp: ENSP00000343234.5:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1030A>G
  hgvsp: ENSP00000384122.1:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1030A>G
  hgvsp: ENSP00000385207.1:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1030A>G
  hgvsp: ENSP00000385735.1:p.Ile344Val
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14906
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30085
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile344Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

22-30951187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951187
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951187
    reference: chr 22
allele count: 2
allele frequency: 1.795170990036801e-5
allele num: 111410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1025G>A
  hgvsp: ENSP00000385825.1:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1025G>A
  hgvsp: ENSP00000402587.2:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1025G>A
  hgvsp: ENSP00000384122.1:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1025G>A
  hgvsp: ENSP00000384388.1:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1025G>A
  hgvsp: ENSP00000385207.1:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1025G>A
  hgvsp: ENSP00000385735.1:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1025G>A
  hgvsp: ENSP00000343234.5:p.Arg342Gln
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14649
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 36495
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6378
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg342Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

22-30951190-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951190
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951190
    reference: chr 22
allele count: 1
allele frequency: 8.974566079730045e-6
allele num: 111426
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1022T>C
  hgvsp: ENSP00000385825.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1022T>C
  hgvsp: ENSP00000343234.5:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1022T>C
  hgvsp: ENSP00000384122.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1022T>C
  hgvsp: ENSP00000385207.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1022T>C
  hgvsp: ENSP00000402587.2:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1022T>C
  hgvsp: ENSP00000384388.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1022T>C
  hgvsp: ENSP00000385735.1:p.Met341Thr
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met341Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/22-30951193-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951193
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951193
    reference: chr 22
allele count: 4
allele frequency: 3.608219524075845e-5
allele num: 110858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1019G>T
  hgvsp: ENSP00000385825.1:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1019G>T
  hgvsp: ENSP00000385735.1:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1019G>T
  hgvsp: ENSP00000384388.1:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1019G>T
  hgvsp: ENSP00000384122.1:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1019G>T
  hgvsp: ENSP00000385207.1:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1019G>T
  hgvsp: ENSP00000343234.5:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1019G>T
  hgvsp: ENSP00000402587.2:p.Arg340Leu
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27515
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35414
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg340Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

22-30951193-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951193
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951193
    reference: chr 22
allele count: 1
allele frequency: 9.020548810189612e-6
allele num: 110858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1019G>A
  hgvsp: ENSP00000384388.1:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1019G>A
  hgvsp: ENSP00000385735.1:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1019G>A
  hgvsp: ENSP00000385825.1:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1019G>A
  hgvsp: ENSP00000384122.1:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1019G>A
  hgvsp: ENSP00000343234.5:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1019G>A
  hgvsp: ENSP00000402587.2:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1019G>A
  hgvsp: ENSP00000385207.1:p.Arg340His
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6860
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35414
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg340His
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

22-30951199-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951199
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951199
    reference: chr 22
allele count: 1
allele frequency: 9.049118615846816e-6
allele num: 110508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1013A>G
  hgvsp: ENSP00000384122.1:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1013A>G
  hgvsp: ENSP00000343234.5:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1013A>G
  hgvsp: ENSP00000384388.1:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1013A>G
  hgvsp: ENSP00000385825.1:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1013A>G
  hgvsp: ENSP00000385207.1:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1013A>G
  hgvsp: ENSP00000402587.2:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1013A>G
  hgvsp: ENSP00000385735.1:p.Asn338Ser
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34703
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asn338Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

22-30951201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951201
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951201
    reference: chr 22
allele count: 13
allele frequency: 1.179074154694529e-4
allele num: 110256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1011C>T
  hgvsp: ENST00000402321.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1011C>T
  hgvsp: ENST00000406361.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1011C>T
  hgvsp: ENST00000338911.5:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1011C>T
  hgvsp: ENST00000401975.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1011C>T
  hgvsp: ENST00000402369.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1011C>T
  hgvsp: ENST00000406955.1:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1011C>T
  hgvsp: ENST00000443111.2:c.1011C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13958
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25492
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7644
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala337Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-30951208-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951208
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951208
    reference: chr 22
allele count: 93
allele frequency: 8.539317589157822e-4
allele num: 108908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1004G>A
  hgvsp: ENSP00000384388.1:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1004G>A
  hgvsp: ENSP00000385207.1:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1004G>A
  hgvsp: ENSP00000385735.1:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1004G>A
  hgvsp: ENSP00000402587.2:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1004G>A
  hgvsp: ENSP00000385825.1:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1004G>A
  hgvsp: ENSP00000343234.5:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1004G>A
  hgvsp: ENSP00000384122.1:p.Arg335His
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13029
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 22847
  bin: 2.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg335His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-30951212-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951212
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951212
    reference: chr 22
allele count: 1
allele frequency: 9.188980574495065e-6
allele num: 108826
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.1000C>G
  hgvsp: ENSP00000385825.1:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.1000C>G
  hgvsp: ENSP00000384388.1:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.1000C>G
  hgvsp: ENSP00000384122.1:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.1000C>G
  hgvsp: ENSP00000385735.1:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.1000C>G
  hgvsp: ENSP00000343234.5:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.1000C>G
  hgvsp: ENSP00000385207.1:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.1000C>G
  hgvsp: ENSP00000402587.2:p.Leu334Val
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22296
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3605
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu334Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

22-30951214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951214
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951214
    reference: chr 22
allele count: 1
allele frequency: 9.207255317189945e-6
allele num: 108610
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.998C>T
  hgvsp: ENSP00000384122.1:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.998C>T
  hgvsp: ENSP00000385825.1:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.998C>T
  hgvsp: ENSP00000385207.1:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.998C>T
  hgvsp: ENSP00000402587.2:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.998C>T
  hgvsp: ENSP00000384388.1:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.998C>T
  hgvsp: ENSP00000343234.5:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.998C>T
  hgvsp: ENSP00000385735.1:p.Ala333Val
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3841
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2639
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala333Val
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

22-30951216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951216
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951216
    reference: chr 22
allele count: 2
allele frequency: 1.850104530905996e-5
allele num: 108102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.996C>T
  hgvsp: ENST00000338911.5:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.996C>T
  hgvsp: ENST00000406361.1:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.996C>T
  hgvsp: ENST00000401975.1:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.996C>T
  hgvsp: ENST00000402369.1:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.996C>T
  hgvsp: ENST00000406955.1:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.996C>T
  hgvsp: ENST00000443111.2:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.996C>T
  hgvsp: ENST00000402321.1:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8478
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala332Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/22-30951219-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951219
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951219
    reference: chr 22
allele count: 1
allele frequency: 9.269558769002595e-6
allele num: 107880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.993G>T
  hgvsp: ENST00000402369.1:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.993G>T
  hgvsp: ENST00000406361.1:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.993G>T
  hgvsp: ENST00000443111.2:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.993G>T
  hgvsp: ENST00000406955.1:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.993G>T
  hgvsp: ENST00000401975.1:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.993G>T
  hgvsp: ENST00000338911.5:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.993G>T
  hgvsp: ENST00000402321.1:c.993G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4524
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24359
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val331Val
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

22-30951219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951219
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951219
    reference: chr 22
allele count: 5
allele frequency: 4.634779384501297e-5
allele num: 107880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.993G>A
  hgvsp: ENST00000443111.2:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.993G>A
  hgvsp: ENST00000406955.1:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.993G>A
  hgvsp: ENST00000406361.1:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.993G>A
  hgvsp: ENST00000402369.1:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.993G>A
  hgvsp: ENST00000401975.1:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.993G>A
  hgvsp: ENST00000402321.1:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.993G>A
  hgvsp: ENST00000338911.5:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19178
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9578
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3843
  bin: 6.75e1
  variant carriers: 1
hgvs: p.Val331Val
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

22-30951222-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951222
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951222
    reference: chr 22
allele count: 1
allele frequency: 9.282637754344274e-6
allele num: 107728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.990G>A
  hgvsp: ENST00000402321.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.990G>A
  hgvsp: ENST00000401975.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.990G>A
  hgvsp: ENST00000406361.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.990G>A
  hgvsp: ENST00000402369.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.990G>A
  hgvsp: ENST00000406955.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.990G>A
  hgvsp: ENST00000443111.2:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.990G>A
  hgvsp: ENST00000338911.5:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11609
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4711
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23726
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu330Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

22-30951226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951226
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951226
    reference: chr 22
allele count: 735
allele frequency: 6.869415679090807e-3
allele num: 106996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.986G>A
  hgvsp: ENSP00000384122.1:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.986G>A
  hgvsp: ENSP00000385825.1:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.986G>A
  hgvsp: ENSP00000384388.1:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.986G>A
  hgvsp: ENSP00000343234.5:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.986G>A
  hgvsp: ENSP00000385735.1:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.986G>A
  hgvsp: ENSP00000385207.1:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.986G>A
  hgvsp: ENSP00000402587.2:p.Arg329His
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 1.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 2.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 18062
  bin: 2.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 11049
  bin: 1.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 9.75e1
  variant carriers: 687
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.25e1
  variant carriers: 3
hgvs: p.Arg329His
num of homozygotes: 10
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

22-30951232-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951232
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951232
    reference: chr 22
allele count: 1
allele frequency: 9.347716352894987e-6
allele num: 106978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.980T>C
  hgvsp: ENSP00000384388.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.980T>C
  hgvsp: ENSP00000402587.2:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.980T>C
  hgvsp: ENSP00000385735.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.980T>C
  hgvsp: ENSP00000384122.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.980T>C
  hgvsp: ENSP00000385825.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.980T>C
  hgvsp: ENSP00000385207.1:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.980T>C
  hgvsp: ENSP00000343234.5:p.Met327Thr
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met327Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

22-30951237-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951237
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951237
    reference: chr 22
allele count: 3
allele frequency: 2.814470129090363e-5
allele num: 106592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.975G>A
  hgvsp: ENST00000406361.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.975G>A
  hgvsp: ENST00000402321.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.975G>A
  hgvsp: ENST00000401975.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.975G>A
  hgvsp: ENST00000402369.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.975G>A
  hgvsp: ENST00000406955.1:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.975G>A
  hgvsp: ENST00000338911.5:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.975G>A
  hgvsp: ENST00000443111.2:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17738
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20296
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu325Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/22-30951241-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951241
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951241
    reference: chr 22
allele count: 2
allele frequency: 1.884872017190033e-5
allele num: 106108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.971G>T
  hgvsp: ENSP00000402587.2:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.971G>T
  hgvsp: ENSP00000385825.1:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.971G>T
  hgvsp: ENSP00000384122.1:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.971G>T
  hgvsp: ENSP00000385735.1:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.971G>T
  hgvsp: ENSP00000384388.1:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.971G>T
  hgvsp: ENSP00000385207.1:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.971G>T
  hgvsp: ENSP00000343234.5:p.Arg324Leu
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18944
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5215
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Arg324Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

22-30951241-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951241
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951241
    reference: chr 22
allele count: 2
allele frequency: 1.884872017190033e-5
allele num: 106108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.971G>A
  hgvsp: ENSP00000385207.1:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.971G>A
  hgvsp: ENSP00000402587.2:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.971G>A
  hgvsp: ENSP00000384122.1:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.971G>A
  hgvsp: ENSP00000384388.1:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.971G>A
  hgvsp: ENSP00000385735.1:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.971G>A
  hgvsp: ENSP00000385825.1:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.971G>A
  hgvsp: ENSP00000343234.5:p.Arg324Gln
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10425
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1982
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4262
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18944
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg324Gln
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

22-30951242-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951242
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951242
    reference: chr 22
allele count: 1
allele frequency: 9.41566389846148e-6
allele num: 106206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.970C>A
  hgvsp: ENST00000338911.5:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.970C>A
  hgvsp: ENST00000402321.1:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.970C>A
  hgvsp: ENST00000406361.1:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.970C>A
  hgvsp: ENST00000443111.2:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.970C>A
  hgvsp: ENST00000402369.1:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.970C>A
  hgvsp: ENST00000406955.1:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.970C>A
  hgvsp: ENST00000401975.1:c.970C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19867
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg324Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

22-30951243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951243
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951243
    reference: chr 22
allele count: 5
allele frequency: 4.691575806481881e-5
allele num: 106574
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.969G>A
  hgvsp: ENST00000402321.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.969G>A
  hgvsp: ENST00000443111.2:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.969G>A
  hgvsp: ENST00000401975.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.969G>A
  hgvsp: ENST00000406361.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.969G>A
  hgvsp: ENST00000406955.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.969G>A
  hgvsp: ENST00000402369.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.969G>A
  hgvsp: ENST00000338911.5:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10389
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18171
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9484
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4108
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly323Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

22-30951246-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951246
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951246
    reference: chr 22
allele count: 1
allele frequency: 9.394964299135663e-6
allele num: 106440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.966C>T
  hgvsp: ENST00000443111.2:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.966C>T
  hgvsp: ENST00000406361.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.966C>T
  hgvsp: ENST00000402321.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.966C>T
  hgvsp: ENST00000406955.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.966C>T
  hgvsp: ENST00000401975.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.966C>T
  hgvsp: ENST00000402369.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.966C>T
  hgvsp: ENST00000338911.5:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4850
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe322Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

22-30951257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951257
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951257
    reference: chr 22
allele count: 1
allele frequency: 9.32540052595259e-6
allele num: 107234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.955G>A
  hgvsp: ENSP00000385207.1:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.955G>A
  hgvsp: ENSP00000385825.1:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.955G>A
  hgvsp: ENSP00000343234.5:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.955G>A
  hgvsp: ENSP00000402587.2:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.955G>A
  hgvsp: ENSP00000385735.1:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.955G>A
  hgvsp: ENSP00000384388.1:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.955G>A
  hgvsp: ENSP00000384122.1:p.Val319Met
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21728
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2941
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4015
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val319Met
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

22-30951276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951276
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951276
    reference: chr 22
allele count: 1
allele frequency: 9.183242419233382e-6
allele num: 108894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.936C>T
  hgvsp: ENST00000402369.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.936C>T
  hgvsp: ENST00000406361.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.936C>T
  hgvsp: ENST00000338911.5:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.936C>T
  hgvsp: ENST00000401975.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.936C>T
  hgvsp: ENST00000402321.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.936C>T
  hgvsp: ENST00000443111.2:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.936C>T
  hgvsp: ENST00000406955.1:c.936C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4661
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32093
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn312Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-30951276-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951276
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951276
    reference: chr 22
allele count: 2
allele frequency: 1.836648483846676e-5
allele num: 108894
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.936C>G
  hgvsp: ENSP00000384122.1:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.936C>G
  hgvsp: ENSP00000385825.1:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.936C>G
  hgvsp: ENSP00000385207.1:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.936C>G
  hgvsp: ENSP00000384388.1:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.936C>G
  hgvsp: ENSP00000402587.2:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.936C>G
  hgvsp: ENSP00000385735.1:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.936C>G
  hgvsp: ENSP00000343234.5:p.Asn312Lys
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12930
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2881
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4661
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2602
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn312Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-30951286-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951286
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951286
    reference: chr 22
allele count: 1
allele frequency: 9.410878976096367e-6
allele num: 106260
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.926G>T
  hgvsp: ENSP00000385735.1:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.926G>T
  hgvsp: ENSP00000384122.1:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.926G>T
  hgvsp: ENSP00000384388.1:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.926G>T
  hgvsp: ENSP00000402587.2:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.926G>T
  hgvsp: ENSP00000385207.1:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.926G>T
  hgvsp: ENSP00000385825.1:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.926G>T
  hgvsp: ENSP00000343234.5:p.Arg309Leu
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28118
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8315
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg309Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

22-30951287-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951287
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951287
    reference: chr 22
allele count: 1
allele frequency: 9.543259595747523e-6
allele num: 104786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.925C>A
  hgvsp: ENSP00000384122.1:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.925C>A
  hgvsp: ENSP00000402587.2:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.925C>A
  hgvsp: ENSP00000385207.1:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.925C>A
  hgvsp: ENSP00000343234.5:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.925C>A
  hgvsp: ENSP00000385825.1:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.925C>A
  hgvsp: ENSP00000384388.1:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.925C>A
  hgvsp: ENSP00000385735.1:p.Arg309Ser
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6509
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2883
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3385
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg309Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

22-30951294-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951294
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951294
    reference: chr 22
allele count: 1
allele frequency: 9.263204698297423e-6
allele num: 107954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.918C>A
  hgvsp: ENSP00000343234.5:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.918C>A
  hgvsp: ENSP00000384388.1:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.918C>A
  hgvsp: ENSP00000402587.2:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.918C>A
  hgvsp: ENSP00000385825.1:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.918C>A
  hgvsp: ENSP00000384122.1:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.918C>A
  hgvsp: ENSP00000385207.1:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.918C>A
  hgvsp: ENSP00000385735.1:p.His306Gln
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25170
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4083
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His306Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

22-30951295-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951295
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951295
    reference: chr 22
allele count: 1476
allele frequency: 1.504004565000306e-2
allele num: 98138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.917A>C
  hgvsp: ENSP00000402587.2:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.917A>C
  hgvsp: ENSP00000385825.1:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.917A>C
  hgvsp: ENSP00000385735.1:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.917A>C
  hgvsp: ENSP00000384122.1:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.917A>C
  hgvsp: ENSP00000385207.1:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.917A>C
  hgvsp: ENSP00000343234.5:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.917A>C
  hgvsp: ENSP00000384388.1:p.His306Pro
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.75e1
  variant carriers: 236
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13828
  bin: 2.75e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 1.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25209
  bin: 2.25e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 1.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6566
  bin: 2.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 1.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 5.25e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 5.75e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 9.75e1
  variant carriers: 475
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 2.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 4.25e1
  variant carriers: 72
hgvs: p.His306Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

22-30951308-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951308
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951308
    reference: chr 22
allele count: 1
allele frequency: 9.032281373629351e-6
allele num: 110714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.904A>G
  hgvsp: ENSP00000385825.1:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.904A>G
  hgvsp: ENSP00000343234.5:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.904A>G
  hgvsp: ENSP00000402587.2:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.904A>G
  hgvsp: ENSP00000384122.1:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.904A>G
  hgvsp: ENSP00000385207.1:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.904A>G
  hgvsp: ENSP00000384388.1:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.904A>G
  hgvsp: ENSP00000385735.1:p.Met302Val
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15820
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met302Val
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

22-30951309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951309
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951309
    reference: chr 22
allele count: 1
allele frequency: 9.017457798297504e-6
allele num: 110896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.903C>T
  hgvsp: ENST00000443111.2:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.903C>T
  hgvsp: ENST00000402369.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.903C>T
  hgvsp: ENST00000338911.5:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.903C>T
  hgvsp: ENST00000406955.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.903C>T
  hgvsp: ENST00000406361.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.903C>T
  hgvsp: ENST00000401975.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.903C>T
  hgvsp: ENST00000402321.1:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15958
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3816
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn301Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

22-30951317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951317
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951317
    reference: chr 22
allele count: 4
allele frequency: 3.561951236887567e-5
allele num: 112298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.895G>A
  hgvsp: ENSP00000385207.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.895G>A
  hgvsp: ENSP00000343234.5:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.895G>A
  hgvsp: ENSP00000385825.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.895G>A
  hgvsp: ENSP00000385735.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.895G>A
  hgvsp: ENSP00000402587.2:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.895G>A
  hgvsp: ENSP00000384122.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.895G>A
  hgvsp: ENSP00000384388.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31506
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5587
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41924
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala299Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

22-30951319-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951319
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951319
    reference: chr 22
allele count: 1
allele frequency: 8.834546611067921e-6
allele num: 113192
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.893C>A
  hgvsp: ENSP00000385735.1:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.893C>A
  hgvsp: ENSP00000385207.1:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.893C>A
  hgvsp: ENSP00000402587.2:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.893C>A
  hgvsp: ENSP00000384122.1:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.893C>A
  hgvsp: ENSP00000385825.1:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.893C>A
  hgvsp: ENSP00000343234.5:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.893C>A
  hgvsp: ENSP00000384388.1:p.Thr298Asn
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr298Asn
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/22-30951323-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951323
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951323
    reference: chr 22
allele count: 1
allele frequency: 8.786265310067303e-6
allele num: 113814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.889G>T
  hgvsp: ENSP00000385825.1:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.889G>T
  hgvsp: ENSP00000385207.1:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.889G>T
  hgvsp: ENSP00000343234.5:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.889G>T
  hgvsp: ENSP00000384388.1:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.889G>T
  hgvsp: ENSP00000384122.1:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.889G>T
  hgvsp: ENSP00000402587.2:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.889G>T
  hgvsp: ENSP00000385735.1:p.Ala297Ser
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala297Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

22-30951324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951324
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951324
    reference: chr 22
allele count: 1
allele frequency: 8.748141020033243e-6
allele num: 114310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.888C>T
  hgvsp: ENST00000401975.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.888C>T
  hgvsp: ENST00000406361.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.888C>T
  hgvsp: ENST00000402321.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.888C>T
  hgvsp: ENST00000406955.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.888C>T
  hgvsp: ENST00000402369.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.888C>T
  hgvsp: ENST00000443111.2:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.888C>T
  hgvsp: ENST00000338911.5:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32684
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44466
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg296Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

22-30951335-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951335
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951335
    reference: chr 22
allele count: 1
allele frequency: 8.580303056303948e-6
allele num: 116546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.877C>G
  hgvsp: ENSP00000402587.2:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.877C>G
  hgvsp: ENSP00000385735.1:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.877C>G
  hgvsp: ENSP00000343234.5:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.877C>G
  hgvsp: ENSP00000384122.1:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.877C>G
  hgvsp: ENSP00000384388.1:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.877C>G
  hgvsp: ENSP00000385207.1:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.877C>G
  hgvsp: ENSP00000385825.1:p.Leu293Val
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu293Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

22-30951339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951339
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951339
    reference: chr 22
allele count: 1
allele frequency: 8.550516451193652e-6
allele num: 116952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.873G>A
  hgvsp: ENST00000338911.5:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.873G>A
  hgvsp: ENST00000406361.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.873G>A
  hgvsp: ENST00000401975.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.873G>A
  hgvsp: ENST00000406955.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.873G>A
  hgvsp: ENST00000402369.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.873G>A
  hgvsp: ENST00000443111.2:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.873G>A
  hgvsp: ENST00000402321.1:c.873G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6438
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly291Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD

22-30951342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951342
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951342
    reference: chr 22
allele count: 3
allele frequency: 2.560032768419436e-5
allele num: 117186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.870G>A
  hgvsp: ENST00000338911.5:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.870G>A
  hgvsp: ENST00000406955.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.870G>A
  hgvsp: ENST00000406361.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.870G>A
  hgvsp: ENST00000401975.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.870G>A
  hgvsp: ENST00000402321.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.870G>A
  hgvsp: ENST00000402369.1:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.870G>A
  hgvsp: ENST00000443111.2:c.870G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19028
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser290Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

22-30951343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951343
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951343
    reference: chr 22
allele count: 1
allele frequency: 8.521226374899876e-6
allele num: 117354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.869C>T
  hgvsp: ENSP00000385825.1:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.869C>T
  hgvsp: ENSP00000385207.1:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.869C>T
  hgvsp: ENSP00000385735.1:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.869C>T
  hgvsp: ENSP00000402587.2:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.869C>T
  hgvsp: ENSP00000384122.1:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.869C>T
  hgvsp: ENSP00000384388.1:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.869C>T
  hgvsp: ENSP00000343234.5:p.Ser290Leu
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser290Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

22-30951360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951360
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951360
    reference: chr 22
allele count: 1
allele frequency: 8.471848048933394e-6
allele num: 118038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.852G>A
  hgvsp: ENST00000402369.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.852G>A
  hgvsp: ENST00000402321.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.852G>A
  hgvsp: ENST00000406955.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.852G>A
  hgvsp: ENST00000406361.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.852G>A
  hgvsp: ENST00000401975.1:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.852G>A
  hgvsp: ENST00000443111.2:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.852G>A
  hgvsp: ENST00000338911.5:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6505
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser284Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

22-30951361-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951361
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951361
    reference: chr 22
allele count: 1
allele frequency: 8.465823470648991e-6
allele num: 118122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.851C>T
  hgvsp: ENSP00000385825.1:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.851C>T
  hgvsp: ENSP00000385207.1:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.851C>T
  hgvsp: ENSP00000385735.1:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.851C>T
  hgvsp: ENSP00000384122.1:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.851C>T
  hgvsp: ENSP00000384388.1:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.851C>T
  hgvsp: ENSP00000343234.5:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.851C>T
  hgvsp: ENSP00000402587.2:p.Ser284Leu
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser284Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

22-30951362-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951362
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951362
    reference: chr 22
allele count: 1
allele frequency: 8.459234946791412e-6
allele num: 118214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.850T>A
  hgvsp: ENSP00000384388.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.850T>A
  hgvsp: ENSP00000343234.5:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.850T>A
  hgvsp: ENSP00000385825.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.850T>A
  hgvsp: ENSP00000385735.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.850T>A
  hgvsp: ENSP00000402587.2:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.850T>A
  hgvsp: ENSP00000385207.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.850T>A
  hgvsp: ENSP00000384122.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser284Thr
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

22-30951365-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951365
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951365
    reference: chr 22
allele count: 1
allele frequency: 8.471704506946798e-6
allele num: 118040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.847G>A
  hgvsp: ENSP00000385207.1:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.847G>A
  hgvsp: ENSP00000384122.1:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.847G>A
  hgvsp: ENSP00000385735.1:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.847G>A
  hgvsp: ENSP00000402587.2:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.847G>A
  hgvsp: ENSP00000385825.1:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.847G>A
  hgvsp: ENSP00000384388.1:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.847G>A
  hgvsp: ENSP00000343234.5:p.Asp283Asn
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp283Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

22-30951368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951368
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951368
    reference: chr 22
allele count: 1
allele frequency: 8.448514751106756e-6
allele num: 118364
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.844C>T
  hgvsp: ENSP00000385735.1:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.844C>T
  hgvsp: ENSP00000384122.1:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.844C>T
  hgvsp: ENSP00000385825.1:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.844C>T
  hgvsp: ENSP00000384388.1:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.844C>T
  hgvsp: ENSP00000385207.1:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.844C>T
  hgvsp: ENSP00000343234.5:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.844C>T
  hgvsp: ENSP00000402587.2:p.Arg282Cys
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg282Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

22-30951368-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30951368
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 30951368
    reference: chr 22
allele count: 3
allele frequency: 2.534554425332027e-5
allele num: 118364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000343234
  ensembl transcript: ENST00000338911
  gene symbol: GAL3ST1
  hgvsc: ENST00000338911.5:c.844C>G
  hgvsp: ENSP00000343234.5:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000402587
  ensembl transcript: ENST00000443111
  gene symbol: GAL3ST1
  hgvsc: ENST00000443111.2:c.844C>G
  hgvsp: ENSP00000402587.2:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385207
  ensembl transcript: ENST00000406361
  gene symbol: GAL3ST1
  hgvsc: ENST00000406361.1:c.844C>G
  hgvsp: ENSP00000385207.1:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384388
  ensembl transcript: ENST00000401975
  gene symbol: GAL3ST1
  hgvsc: ENST00000401975.1:c.844C>G
  hgvsp: ENSP00000384388.1:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385735
  ensembl transcript: ENST00000402321
  gene symbol: GAL3ST1
  hgvsc: ENST00000402321.1:c.844C>G
  hgvsp: ENSP00000385735.1:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000385825
  ensembl transcript: ENST00000406955
  gene symbol: GAL3ST1
  hgvsc: ENST00000406955.1:c.844C>G
  hgvsp: ENSP00000385825.1:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128242
  ensembl protein: ENSP00000384122
  ensembl transcript: ENST00000402369
  gene symbol: GAL3ST1
  hgvsc: ENST00000402369.1:c.844C>G
  hgvsp: ENSP00000384122.1:p.Arg282Gly
  variant of: http://identifiers.org/hgnc/24240
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg282Gly
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1160
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.859185132237312e-4
allele num: 13990
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.648e0

QD
type: SiteQuality
SIO_000300: 1.667e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.816e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.397649e6

VQSLOD
type: SiteQuality
SIO_000300: -5.409e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

GenotypeQuality
all individuals: 46433
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6193
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.394e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.136e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: -9.788e-1

DP
type: SiteQuality
SIO_000300: 1.404506e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47677
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.024116132053383e-4
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.599e0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 2.456e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.424949e6

QD
type: SiteQuality
SIO_000300: 1.3e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 8.25e1
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GenotypeQuality
all individuals: 48087
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64980
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.22e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.151e1

FS
type: SiteQuality
SIO_000300: 3.793e0

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

DP
type: SiteQuality
SIO_000300: 1.429696e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.316e0

GenotypeQuality
all individuals: 188
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 200
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variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 1.282e1

FS
type: SiteQuality
SIO_000300: 5.745e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: -8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.072e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.863e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.649e0

DP
type: SiteQuality
SIO_000300: 1.437086e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 101

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 173
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.842808440062656e-4
allele num: 65118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

South Asian
type: Population
allele count: 86
allele frequency: 5.256081163671922e-3
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.480076561684357e-4
allele num: 11494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 1.441131e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.984e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 133
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.438343e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.608436511106332e-5
allele num: 65098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.14e-1

DP
type: SiteQuality
SIO_000300: 1.438711e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 8.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.102e1

MQ
type: SiteQuality
SIO_000300: 5.917e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.971608832807571e-4
allele num: 10144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.438846e6

VQSLOD
type: SiteQuality
SIO_000300: 4.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 1.321e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536428725071444e-5
allele num: 65086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e0

QD
type: SiteQuality
SIO_000300: 1.132e1

FS
type: SiteQuality
SIO_000300: 9.84e-1

DP
type: SiteQuality
SIO_000300: 1.438425e6

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.798e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65058
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: -8.21e-1

DP
type: SiteQuality
SIO_000300: 1.437614e6

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.265e0

QD
type: SiteQuality
SIO_000300: 1.069e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.042102701387199e-4
allele num: 16436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65034
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
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allele num: 8530
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VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.437711e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 195
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537988311288834e-5
allele num: 65020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.437201e6

VQSLOD
type: SiteQuality
SIO_000300: -1.078e0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.309e1

FS
type: SiteQuality
SIO_000300: 1.127e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e0

GenotypeQuality
all individuals: 388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48190
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1544
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.918666931164451e-5
allele num: 10082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539314081645219e-5
allele num: 64964
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

DP
type: SiteQuality
SIO_000300: 1.436055e6

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.44e-1

QD
type: SiteQuality
SIO_000300: 1.136e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.645643456069996e-4
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 1.121e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.818e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
SIO_000300: 1.433009e6

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 8.33e-1

FS
type: SiteQuality
SIO_000300: 2.301e0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6478
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10016
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

FS
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.162e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.865e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

DP
type: SiteQuality
SIO_000300: 1.430685e6

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

GenotypeQuality
all individuals: 226
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46385
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6255
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560598021161709e-5
allele num: 64078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.410876e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 3.477e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.607e0

QD
type: SiteQuality
SIO_000300: 9.279999999999999e0

GenotypeQuality
all individuals: 613
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3089
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6056
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576143492103521e-5
allele num: 63446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.388991e6

MQRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.001e1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 44148
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
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variant carriers: 0

GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584987003106575e-5
allele num: 63092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.384e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

QD
type: SiteQuality
SIO_000300: 1.291e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 3.441e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

DP
type: SiteQuality
SIO_000300: 1.378716e6

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeQuality
all individuals: 385
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 1068
bin: 7.75e1
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GenotypeQuality
all individuals: 42598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1393
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62456
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.089087344805053e-4
allele num: 9182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.362508e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.208e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 8.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e0

GenotypeQuality
all individuals: 575
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 7.5e0
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GenotypeQuality
all individuals: 1373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 320
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variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.612591111397794e-5
allele num: 62012
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.353077e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 3.274e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.215e1

GenotypeQuality
all individuals: 1033
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 7.5e0
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GenotypeQuality
all individuals: 1000
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.201188641866608e-4
allele num: 9086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.458e0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

DP
type: SiteQuality
SIO_000300: 1.34341e6

FS
type: SiteQuality
SIO_000300: 4.33e0

MQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

QD
type: SiteQuality
SIO_000300: 1.496e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.103022281050077e-4
allele num: 9066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.868e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 7.716e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

DP
type: SiteQuality
SIO_000300: 1.341144e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 40474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.104484205875856e-4
allele num: 9054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11200
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2758880381574e-5
allele num: 15934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.06e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

VQSLOD
type: SiteQuality
SIO_000300: -5.528999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.0351e1

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.42e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

DP
type: SiteQuality
SIO_000300: 1.337674e6

GenotypeQuality
all individuals: 1068
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.28693574751666e-5
allele num: 15906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627021574306075e-5
allele num: 61462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 1.275e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.877e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 6.84e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.33677e6

GenotypeQuality
all individuals: 1001
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1001
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.258390355164549e-5
allele num: 61380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.892e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.808e0

QD
type: SiteQuality
SIO_000300: 1.379e1

DP
type: SiteQuality
SIO_000300: 1.332746e6

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 850
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 98
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.452987143937484e-4
allele num: 15868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.222e0

QD
type: SiteQuality
SIO_000300: 1.354e1

FS
type: SiteQuality
SIO_000300: 1.899e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.323535e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

GenotypeQuality
all individuals: 350
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 3.092555776452397e-3
allele num: 9054
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.593244699964068e-4
allele num: 11132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 2.74e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.214e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 1.315412e6

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

GenotypeQuality
all individuals: 627
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.297391763115376e-5
allele num: 60654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.298345e6

MQRankSum
type: SiteQuality
SIO_000300: -7.52e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.217e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.861e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.064e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 7.94e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.647446457990115e-5
allele num: 60700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15762
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6000
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

DP
type: SiteQuality
SIO_000300: 1.29504e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

FS
type: SiteQuality
SIO_000300: 1.929e1

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.809e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

QD
type: SiteQuality
SIO_000300: 1.322e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.47127207690588e-4
allele num: 8946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.253e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 1.285011e6

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11026
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60366
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8946
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.246882793017456e-3
allele num: 802
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

FS
type: SiteQuality
SIO_000300: 1.253e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

DP
type: SiteQuality
SIO_000300: 1.285011e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10994
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15678
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5954
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African
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allele count: 1
allele frequency: 1.119068934646374e-4
allele num: 8936
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 794
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60132
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East Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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BaseQRankSum
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MQRankSum
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MQ
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QD
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InbreedingCoeff
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SIO_000300: -2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 2.363e0

ClippingRankSum
type: SiteQuality
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DP
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SIO_000300: 1.265057e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5928
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.670891564657616e-5
allele num: 59962
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10972
num of homozygotes: 0

East Asian
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allele count: 7
allele frequency: 8.741258741258741e-4
allele num: 8008
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South Asian
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allele frequency: 6.382435537401073e-5
allele num: 15668
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Other
type: Population
allele count: 1
allele frequency: 1.259445843828715e-3
allele num: 794
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African
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

VQSLOD
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.708817498291183e-4
allele num: 5852
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7898
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European (Non-Finnish)
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allele count: 80
allele frequency: 1.351808043257857e-3
allele num: 59180
num of homozygotes: 0

African
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allele count: 5
allele frequency: 5.706459712394431e-4
allele num: 8762
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.674444240308654e-4
allele num: 10886
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.929012345679012e-4
allele num: 15552
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.787e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

DP
type: SiteQuality
SIO_000300: 1.224652e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59096
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.140771161305042e-4
allele num: 8766
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

DP
type: SiteQuality
SIO_000300: 1.213962e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 2.222e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.068e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8712
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58966
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7884
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10872
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European (Finnish)
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allele count: 1
allele frequency: 1.714089818306479e-4
allele num: 5834
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.203395e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 6.454944487477407e-5
allele num: 15492
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703229322796021e-5
allele num: 58712
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
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FS
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10808
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.453278265358803e-5
allele num: 15496
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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African
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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FS
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Non-Finnish)
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African
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Other
type: Population
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele num: 15496
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East Asian
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VQSLOD
type: SiteQuality
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MQ
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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FS
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BaseQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 540
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10788
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5740
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.708467163261122e-5
allele num: 58532
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.39e-1

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

DP
type: SiteQuality
SIO_000300: 1.171836e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.03e-1

GenotypeQuality
all individuals: 1620
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4077
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4900
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 790
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1912
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1765
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 21143
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 308
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 946
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 9142
bin: 2.25e1
variant carriers: 5

Other
type: Population
allele count: 5
allele frequency: 6.578947368421052e-3
allele num: 760
num of homozygotes: 0

Latino
type: Population
allele count: 52
allele frequency: 4.849841447491139e-3
allele num: 10722
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.232645646814584e-3
allele num: 15414
num of homozygotes: 0

East Asian
type: Population
allele count: 50
allele frequency: 6.458279514337381e-3
allele num: 7742
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.761183515322296e-3
allele num: 5678
num of homozygotes: 0

African
type: Population
allele count: 450
allele frequency: 5.247201492537314e-2
allele num: 8576
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 149
allele frequency: 2.564367341319014e-3
allele num: 58104
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 5.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

QD
type: SiteQuality
SIO_000300: 1.372e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.16132e6

GenotypeQuality
all individuals: 459
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2629
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3514
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21552
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.721585235685019e-5
allele num: 58086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

DP
type: SiteQuality
SIO_000300: 1.149828e6

QD
type: SiteQuality
SIO_000300: 8.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.007e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

FS
type: SiteQuality
SIO_000300: 1.44e0

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.184e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 1996
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4340
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1985
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.950838860710105e-4
allele num: 15378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5686
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.554e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 1.816e0

QD
type: SiteQuality
SIO_000300: 1.185e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.21e-1

DP
type: SiteQuality
SIO_000300: 1.147687e6

GenotypeQuality
all individuals: 243
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.317175974710221e-4
allele num: 7592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.735026719411479e-5
allele num: 57636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15336
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

QD
type: SiteQuality
SIO_000300: 6.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.646e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

DP
type: SiteQuality
SIO_000300: 1.14817e6

FS
type: SiteQuality
SIO_000300: 9.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.086e0

GenotypeQuality
all individuals: 3414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 794
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4278
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.470053438822958e-5
allele num: 57636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15336
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

FS
type: SiteQuality
SIO_000300: 9.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.646e-1

QD
type: SiteQuality
SIO_000300: 6.05e0

DP
type: SiteQuality
SIO_000300: 1.14817e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.086e0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 225
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5168
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9303
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.521455588887439e-5
allele num: 15334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.150341e6

VQSLOD
type: SiteQuality
SIO_000300: -1.453e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.88e-1

FS
type: SiteQuality
SIO_000300: 1.154e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.272e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.301e0

GenotypeQuality
all individuals: 4169
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1697
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 132
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variant carriers: 0

GenotypeQuality
all individuals: 5134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1894
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variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 21257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2633
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15360
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.50140056022409e-4
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.453515678961183e-5
allele num: 57912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

QD
type: SiteQuality
SIO_000300: 1.521e1

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

DP
type: SiteQuality
SIO_000300: 1.152672e6

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 2.621e0

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.061e0

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23517
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.727712508638563e-5
allele num: 57880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.718e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

DP
type: SiteQuality
SIO_000300: 1.163235e6

GenotypeQuality
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4161
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1296
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.713737318343844e-5
allele num: 58352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.727e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.190275e6

VQSLOD
type: SiteQuality
SIO_000300: -1.31e0

QD
type: SiteQuality
SIO_000300: 5.94e0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.397e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

GenotypeQuality
all individuals: 8277
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2602
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.137656427758817e-4
allele num: 8790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59272
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.257252e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

QD
type: SiteQuality
SIO_000300: 1.272e1

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

FS
type: SiteQuality
SIO_000300: 2.571e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32093
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variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 379
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15556
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.85013876040703e-4
allele num: 10810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59272
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

FS
type: SiteQuality
SIO_000300: 2.571e0

DP
type: SiteQuality
SIO_000300: 1.257252e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 326
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3695
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.738767561552372e-5
allele num: 57512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5476
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.839e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.153e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.204e0

QD
type: SiteQuality
SIO_000300: 1.31e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

DP
type: SiteQuality
SIO_000300: 1.25852e6

MQRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

GenotypeQuality
all individuals: 25525
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10762
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.290322580645161e-4
allele num: 7750
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15600
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.852e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.252025e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

FS
type: SiteQuality
SIO_000300: 1.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

QD
type: SiteQuality
SIO_000300: 1.135e1

GenotypeQuality
all individuals: 700
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1826
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 953
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variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
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variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31820
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.74e-1

DP
type: SiteQuality
SIO_000300: 1.259978e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.63e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.375e0

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 63

GenotypeQuality
all individuals: 4304
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 2173
bin: 3.25e1
variant carriers: 38

GenotypeQuality
all individuals: 29888
bin: 6.25e1
variant carriers: 97

GenotypeQuality
all individuals: 762
bin: 1.75e1
variant carriers: 23

GenotypeQuality
all individuals: 341
bin: 8.25e1
variant carriers: 87

GenotypeQuality
all individuals: 974
bin: 7.25e1
variant carriers: 81

GenotypeQuality
all individuals: 739
bin: 7.75e1
variant carriers: 72

GenotypeQuality
all individuals: 137
bin: 9.25e1
variant carriers: 61

GenotypeQuality
all individuals: 1535
bin: 3.75e1
variant carriers: 49

GenotypeQuality
all individuals: 3829
bin: 6.75e1
variant carriers: 85

East Asian
type: Population
allele count: 26
allele frequency: 3.349652151507343e-3
allele num: 7762
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 5.094243504839531e-4
allele num: 15704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 27
allele frequency: 5.096262740656852e-3
allele num: 5298
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.23728813559322e-3
allele num: 708
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 2.122641509433962e-3
allele num: 8480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1382
allele frequency: 2.796778240984336e-2
allele num: 49414
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.113999257333828e-3
allele num: 10772
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.062e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.16e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.622e1

DP
type: SiteQuality
SIO_000300: 1.267952e6

MQRankSum
type: SiteQuality
SIO_000300: -6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.715e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e0

FS
type: SiteQuality
SIO_000300: 1.41057e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.706e0

GenotypeQuality
all individuals: 138
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5344
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variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 477
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variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5888
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.2306177701206e-4
allele num: 8126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59870
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

QD
type: SiteQuality
SIO_000300: 1.51e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 1.321587e6

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
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GenotypeQuality
all individuals: 723
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5334
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.234413965087281e-5
allele num: 16040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.639e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.084e0

DP
type: SiteQuality
SIO_000300: 1.326301e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

QD
type: SiteQuality
SIO_000300: 8.24e0

GenotypeQuality
all individuals: 417
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
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GenotypeQuality
all individuals: 848
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variant carriers: 0

GenotypeQuality
all individuals: 517
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GenotypeQuality
all individuals: 141
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GenotypeQuality
all individuals: 1122
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
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variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.299241174529858e-4
allele num: 6062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.285259042675515e-5
allele num: 60878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.915e1

DP
type: SiteQuality
SIO_000300: 1.365097e6

VQSLOD
type: SiteQuality
SIO_000300: 8.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.364e0

FS
type: SiteQuality
SIO_000300: 3.505e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3780
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
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GenotypeQuality
all individuals: 1219
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
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GenotypeQuality
all individuals: 555
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GenotypeQuality
all individuals: 5884
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variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.914244963451596e-5
allele num: 11218
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -9.0e-4

BaseQRankSum
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DP
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MQRankSum
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SIO_000300: 3.4e-2

FS
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ReadPosRankSum
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QD
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 830
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European (Non-Finnish)
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allele frequency: 1.617128626410945e-5
allele num: 61838
num of homozygotes: 0

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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FS
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DP
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16252
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6302
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Latino
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DP
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FS
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MQ
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QD
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.771e0

MQRankSum
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SIO_000300: -1.303e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.573217544522056e-5
allele num: 63564
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8362
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African
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.685e0

InbreedingCoeff
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MQ
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FS
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

DP
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.03e-1

QD
type: SiteQuality
SIO_000300: 1.559e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.047998323202683e-4
allele num: 9542
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63840
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.815e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
SIO_000300: 2.848e0

VQSLOD
type: SiteQuality
SIO_000300: -7.4e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.043187982474442e-4
allele num: 9586
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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South Asian
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allele frequency: 1.218917601170161e-4
allele num: 16408
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 6546
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African
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

African
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Latino
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele num: 6590
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FS
type: SiteQuality
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DP
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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African
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Latino
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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DP
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 1.455014e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

QD
type: SiteQuality
SIO_000300: 1.394e1

VQSLOD
type: SiteQuality
SIO_000300: 9.89e-1

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45355
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.431e-1

DP
type: SiteQuality
SIO_000300: 1.475725e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

GenotypeQuality
all individuals: 1338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-1

FS
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.984e1

QD
type: SiteQuality
SIO_000300: 1.436e1

DP
type: SiteQuality
SIO_000300: 1.472392e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-1