22-46751515-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751515
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751514
    reference: chr 22
allele count: 3
allele frequency: 2.527678074920378e-5
allele num: 118686
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1218delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.913delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+34delC
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+34delC
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: GC
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

22-46751515-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751515
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751515
    reference: chr 22
allele count: 2
allele frequency: 1.685118716613585e-5
allele num: 118686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1214G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.909G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+30G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+30G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

22-46751527-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751527
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751527
    reference: chr 22
allele count: 8
allele frequency: 6.747296864193783e-5
allele num: 118566
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.921T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+42T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1226T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+42T>C
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11893
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6430
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/22-46751529-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751529
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751529
    reference: chr 22
allele count: 2
allele frequency: 1.686568171085475e-5
allele num: 118584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1228A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.923A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+44A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+44A>C
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30434
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

22-46751530-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751530
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751530
    reference: chr 22
allele count: 13
allele frequency: 1.097176037675337e-4
allele num: 118486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.924G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+45G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1229G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+45G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11886
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1310
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

22-46751531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751531
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751531
    reference: chr 22
allele count: 1
allele frequency: 8.438248894589395e-6
allele num: 118508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1230C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.925C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+46C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+46C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

22-46751535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751535
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751535
    reference: chr 22
allele count: 1
allele frequency: 8.445945945945946e-6
allele num: 118400
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1018+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*556+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.929C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*611+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1234C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*552+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*462+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2072+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+50C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

22-46751837-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751837
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751837
    reference: chr 22
allele count: 2
allele frequency: 1.697187759881876e-5
allele num: 117842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1231C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1536C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+352C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+352C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

22-46751838-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751838
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751838
    reference: chr 22
allele count: 6
allele frequency: 5.08949020273136e-5
allele num: 117890
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1537G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-49G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+353G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1232G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-49G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-49G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-49G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+353G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-49G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-49G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

22-46751838-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751838
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751838
    reference: chr 22
allele count: 1
allele frequency: 8.482483671218934e-6
allele num: 117890
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+353G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-49G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-49G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-49G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+353G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1232G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1537G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-49G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-49G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-49G>C
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8182
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

22-46751848-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751848
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751848
    reference: chr 22
allele count: 2
allele frequency: 1.688561683158286e-5
allele num: 118444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-39G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-39G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+363G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-39G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1547G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-39G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1242G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-39G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+363G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-39G>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

22-46751851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751851
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751851
    reference: chr 22
allele count: 1
allele frequency: 8.429286713758282e-6
allele num: 118634
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-36C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-36C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+366C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1550C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1245C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-36C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-36C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-36C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+366C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-36C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14043
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

22-46751854-T-TGCCCCCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751854
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751862
    reference: chr 22
allele count: 2
allele frequency: 1.682991686021071e-5
allele num: 118836
alternate allele: TGCCCCCTC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14422
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3891
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

22-46751863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751863
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751863
    reference: chr 22
allele count: 1
allele frequency: 8.367780697203488e-6
allele num: 119506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-24C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-24C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1562C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-24C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-24C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-24C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+378C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1257C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+378C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-24C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8695
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

22-46751865-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751865
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751865
    reference: chr 22
allele count: 1
allele frequency: 8.355614973262032e-6
allele num: 119680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-22A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+380A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1259A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-22A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1564A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-22A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-22A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-22A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+380A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-22A>G
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/22-46751869-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751869
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751869
    reference: chr 22
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1263C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1568C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-18C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+384C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+384C>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

22-46751869-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751869
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751869
    reference: chr 22
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-18C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+384C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1568C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+384C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-18C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-18C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1263C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-18C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-18C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-18C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15971
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/22-46751870-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751870
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751870
    reference: chr 22
allele count: 1
allele frequency: 8.338475393159114e-6
allele num: 119926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1264C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1569C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-17C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+385C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+385C>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-46751871-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751871
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751869
    reference: chr 22
allele count: 2
allele frequency: 1.667083437526048e-5
allele num: 119970
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-11_1019-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-11_*553-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1270_1271delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+391_1018+392delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-11_*612-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-11_*557-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-11_2073-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1575_1576delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-11_*463-10delCT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+391_*552+392delCT
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8666
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: CCT
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

22-46751874-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751874
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751874
    reference: chr 22
allele count: 2
allele frequency: 1.665417603464068e-5
allele num: 120090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1573C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1268C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+389C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-13C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+389C>G
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8417
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-46751876-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751876
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751874
    reference: chr 22
allele count: 1
allele frequency: 8.322375538873816e-6
allele num: 120158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+392_1018+393delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-10_*463-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1576_1577delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1271_1272delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-10_2073-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-10_1019-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-10_*612-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-10_*553-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-10_*557-9delTT
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+392_*552+393delTT
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8688
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4022
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CTT
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

22-46751876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751876
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751876
    reference: chr 22
allele count: 2
allele frequency: 1.664475107774763e-5
allele num: 120158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+391C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1575C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-11C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-11C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-11C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+391C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-11C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-11C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1270C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-11C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8688
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

22-46751878-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751878
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751878
    reference: chr 22
allele count: 1
allele frequency: 8.319605983460623e-6
allele num: 120198
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1272T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+393T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-9T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1577T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+393T>C
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

22-46751879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751879
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751879
    reference: chr 22
allele count: 2
allele frequency: 1.663672056964131e-5
allele num: 120216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-8C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1273C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+394C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1578C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-8C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-8C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-8C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-8C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+394C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-8C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16282
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1019-8C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

22-46751883-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751883
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751883
    reference: chr 22
allele count: 4
allele frequency: 3.324136555529701e-5
allele num: 120332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-4C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+398C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1277C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1582C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-4C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-4C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-4C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+398C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-4C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-4C>G
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1019-4C>G
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

22-46751886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751886
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751886
    reference: chr 22
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+401G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2073-1G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1585G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*463-1G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1019-1G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1280G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*612-1G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*553-1G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+401G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*557-1G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1019-1G>A
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

22-46751889-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751889
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751889
    reference: chr 22
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*614C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+404C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1021C>G
  hgvsp: ENSP00000290846.4:p.Pro341Ala
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*559C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1283C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*465C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+404C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*555C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1588C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2075C>G
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro341Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

22-46751889-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751889
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751889
    reference: chr 22
allele count: 1
allele frequency: 8.302337938363443e-6
allele num: 120448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+404C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+404C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1588C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1021C>T
  hgvsp: ENSP00000290846.4:p.Pro341Ser
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2075C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1283C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*465C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*555C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*559C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*614C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro341Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

22-46751890-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751890
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751890
    reference: chr 22
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*560C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*615C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*466C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*556C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1284C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1589C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1022C>G
  hgvsp: ENSP00000290846.4:p.Pro341Arg
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+405C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2076C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+405C>G
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro341Arg
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-46751890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751890
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751890
    reference: chr 22
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*615C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2076C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1022C>T
  hgvsp: ENSP00000290846.4:p.Pro341Leu
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+405C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1284C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*556C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*560C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*466C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1589C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+405C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro341Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

22-46751897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751897
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751897
    reference: chr 22
allele count: 3
allele frequency: 2.488057324840764e-5
allele num: 120576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1596G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*567G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1029G>A
  hgvsp: ENST00000290846.4:c.1029G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*622G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+412G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*563G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*473G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2083G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1291G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+412G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8700
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Val343Val
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

22-46751904-C-CTCAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751904
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751908
    reference: chr 22
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: CTCAA
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1041_1044dupTCAA
  hgvsp: ENSP00000290846.4:p.Asp349SerfsTer58
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+424_*552+427dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2095_2098dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*485_*488dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*634_*637dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*579_*582dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*575_*578dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1303_1306dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+424_1018+427dupTCAA
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1608_1611dupTCAA
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8558
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp349SerfsTer58
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-46751921-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751921
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751921
    reference: chr 22
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+436C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*497C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1053C>A
  hgvsp: ENST00000290846.4:c.1053C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*587C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1315C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+436C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*591C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1620C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2107C>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*646C>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr351Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

22-46751921-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751921
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751921
    reference: chr 22
allele count: 5
allele frequency: 4.143394600328157e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+436C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1315C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1053C>T
  hgvsp: ENST00000290846.4:c.1053C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*587C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1620C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+436C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*591C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*646C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2107C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22609
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8802
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr351Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

22-46751922-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751922
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751922
    reference: chr 22
allele count: 5
allele frequency: 4.143188597944978e-5
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1054G>A
  hgvsp: ENSP00000290846.4:p.Val352Met
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1316G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*647G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*588G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1621G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*592G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+437G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*498G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2108G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+437G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4029
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val352Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

22-46751922-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751922
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751922
    reference: chr 22
allele count: 2
allele frequency: 1.657275439177991e-5
allele num: 120680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+437G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*592G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1054G>T
  hgvsp: ENSP00000290846.4:p.Val352Leu
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1316G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*498G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+437G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1621G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*588G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*647G>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2108G>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val352Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

22-46751930-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751930
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751930
    reference: chr 22
allele count: 3
allele frequency: 2.485789569626966e-5
allele num: 120686
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*655G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1629G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1062G>A
  hgvsp: ENST00000290846.4:c.1062G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+445G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*596G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+445G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1324G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*600G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*506G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2116G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8801
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val354Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

22-46751932-CAGCTGTGCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751932
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751923
    reference: chr 22
allele count: 2
allele frequency: 1.657550140891762e-5
allele num: 120660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsp: ENSP00000290846.4:p.Gln358_Val360del
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln358_Val360del
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: CAGCTGTGCA
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

22-46751933-A-AGCTGTGCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751933
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751942
    reference: chr 22
allele count: 4
allele frequency: 3.314990386527879e-5
allele num: 120664
alternate allele: AGCTGTGCAG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsp: ENSP00000290846.4:p.Gln358_Val360dup
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16689
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln358_Val360dup
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/22-46751933-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751933
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751933
    reference: chr 22
allele count: 1
allele frequency: 8.287475966319697e-6
allele num: 120664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+448A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*599A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*658A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1327A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1065A>C
  hgvsp: ENST00000290846.4:c.1065A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2119A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*603A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1632A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*509A>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+448A>C
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr355Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

22-46751949-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751949
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751949
    reference: chr 22
allele count: 15
allele frequency: 1.243781094527363e-4
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*674C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*525C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*615C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1081C>T
  hgvsp: ENSP00000290846.4:p.Arg361Cys
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1648C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2135C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+464C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1343C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+464C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*619C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 22423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg361Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

22-46751950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751950
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751950
    reference: chr 22
allele count: 5
allele frequency: 4.146074496666556e-5
allele num: 120596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1649G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*675G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*526G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2136G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+465G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1344G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*616G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1082G>A
  hgvsp: ENSP00000290846.4:p.Arg361His
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*620G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+465G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg361His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

22-46751959-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751959
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751959
    reference: chr 22
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+474C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2145C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*535C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+474C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*625C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1353C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*629C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1091C>T
  hgvsp: ENSP00000290846.4:p.Ala364Val
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*684C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1658C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala364Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

22-46751960-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751960
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751960
    reference: chr 22
allele count: 1
allele frequency: 8.295037908323241e-6
allele num: 120554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*685C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2146C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*630C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*536C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1659C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1354C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*626C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1092C>G
  hgvsp: ENST00000290846.4:c.1092C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+475C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+475C>G
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala364Ala
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

22-46751961-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751961
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751961
    reference: chr 22
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1660A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*627A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*686A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2147A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1093A>G
  hgvsp: ENSP00000290846.4:p.Thr365Ala
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+476A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*631A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*537A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+476A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1355A>G
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8704
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr365Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

22-46751962-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751962
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751962
    reference: chr 22
allele count: 1
allele frequency: 8.296689620841284e-6
allele num: 120530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1661C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2148C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*687C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1094C>T
  hgvsp: ENSP00000290846.4:p.Thr365Ile
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1356C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+477C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+477C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*628C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*632C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*538C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr365Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

22-46751967-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751967
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751967
    reference: chr 22
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2153C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+482C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*633C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1666C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*637C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*692C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*543C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+482C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1361C>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1099C>G
  hgvsp: ENSP00000290846.4:p.Gln367Glu
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22130
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln367Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

22-46751968-A-AGGTGCGTGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751968
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751977
    reference: chr 22
allele count: 1
allele frequency: 8.299168423323983e-6
allele num: 120494
alternate allele: AGGTGCGTGG
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3393
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

22-46751970-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751970
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751970
    reference: chr 22
allele count: 1
allele frequency: 8.301097405076952e-6
allele num: 120466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+485G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1669G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+485G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+1G>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+1G>C
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16617
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1101+1G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

22-46751973-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751973
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751973
    reference: chr 22
allele count: 3
allele frequency: 2.491156394798465e-5
allele num: 120426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+488C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+4C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1672C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+488C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1101+4C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

22-46751977-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751977
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751977
    reference: chr 22
allele count: 2
allele frequency: 1.661874927292972e-5
allele num: 120346
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+492G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+8G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1676G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+492G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1101+8G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

22-46751982-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751982
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751982
    reference: chr 22
allele count: 1
allele frequency: 8.31255195344971e-6
allele num: 120300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+497T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1681T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+497T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+13T>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+13T>G
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

22-46751984-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751984
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751984
    reference: chr 22
allele count: 1
allele frequency: 8.315040244794785e-6
allele num: 120264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+499G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1683G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+15G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+499G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

22-46751989-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751989
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751989
    reference: chr 22
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1688G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+504G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+504G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+20G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+20G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2813
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

22-46751994-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751994
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751994
    reference: chr 22
allele count: 7
allele frequency: 5.832750058327501e-5
allele num: 120012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+509C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+509C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+25C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1693C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+25C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

22-46751995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751995
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751995
    reference: chr 22
allele count: 2
allele frequency: 1.666694444907415e-5
allele num: 119998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+510G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+510G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1694G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+26G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+26G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

22-46751997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751997
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751997
    reference: chr 22
allele count: 1
allele frequency: 8.330417687142833e-6
allele num: 120042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+512G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1696G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+512G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+28G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+28G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

22-46751997-GGAGGACTGTACTGCTCTGCACCCTGCCAGGGCACCCGGGTTACA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751997
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751953
    reference: chr 22
allele count: 1
allele frequency: 8.330417687142833e-6
allele num: 120042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8696
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3307
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: GGAGGACTGTACTGCTCTGCACCCTGCCAGGGCACCCGGGTTACA
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

22-46751998-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46751998
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46751998
    reference: chr 22
allele count: 10
allele frequency: 8.332500083325001e-5
allele num: 120012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+513G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1697G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+29G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+513G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+29G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16153
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2795
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

22-46752004-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752004
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752004
    reference: chr 22
allele count: 2
allele frequency: 1.668891855807744e-5
allele num: 119840
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1703T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+519T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+35T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+519T>C
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+35T>C
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

22-46752007-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752007
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752007
    reference: chr 22
allele count: 1
allele frequency: 8.354498061756449e-6
allele num: 119696
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+522A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+522A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+38A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1706A>G
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+38A>G
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2772
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

22-46752008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752008
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752008
    reference: chr 22
allele count: 3
allele frequency: 2.506600715216737e-5
allele num: 119684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+523C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1707C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+39C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+523C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+39C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15214
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

22-46752016-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752016
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752016
    reference: chr 22
allele count: 1
allele frequency: 8.37408722449253e-6
allele num: 119416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1715C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+531C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+531C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+47C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+47C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14344
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3847
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18165
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

22-46752018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752018
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752018
    reference: chr 22
allele count: 1
allele frequency: 8.380262805041566e-6
allele num: 119328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1717C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+533C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+533C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+49C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+49C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8677
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

22-46752019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752019
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752019
    reference: chr 22
allele count: 4
allele frequency: 3.35536690937154e-5
allele num: 119212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*552+534C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*635+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*694+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*545+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*639+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2155+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1101+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.1718C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1363+50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1018+534C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15159
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8397
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

22-46752688-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752688
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752688
    reference: chr 22
allele count: 1
allele frequency: 8.40152571707022e-6
allele num: 119026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*546-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2156-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*636-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*553-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*695-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1364-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.2387C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1102-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*640-51C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1019-51C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

22-46752689-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752689
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752689
    reference: chr 22
allele count: 1
allele frequency: 8.40180806909647e-6
allele num: 119022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1019-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1364-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2156-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*546-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*636-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*553-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.2388C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*695-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*640-50C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1102-50C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25783
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

22-46752691-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752691
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752691
    reference: chr 22
allele count: 1
allele frequency: 8.405339071378139e-6
allele num: 118972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*695-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.2390C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*636-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1019-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*546-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2156-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*553-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1364-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1102-48C>T
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*640-48C>T
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

22-46752692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 46752692
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 46752692
    reference: chr 22
allele count: 1
allele frequency: 8.39278220730172e-6
allele num: 119150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000491612
  gene symbol: TRMU
  hgvsc: ENST00000491612.1:n.2391G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000393014
  ensembl transcript: ENST00000441818
  gene symbol: TRMU
  hgvsc: ENST00000441818.1:c.*636-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370409
  ensembl transcript: ENST00000381021
  gene symbol: TRMU
  hgvsc: ENST00000381021.3:c.*695-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000370407
  ensembl transcript: ENST00000381019
  gene symbol: TRMU
  hgvsc: ENST00000381019.3:c.1019-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000407700
  ensembl transcript: ENST00000457572
  gene symbol: TRMU
  hgvsc: ENST00000457572.1:c.*546-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000413880
  ensembl transcript: ENST00000456595
  gene symbol: TRMU
  hgvsc: ENST00000456595.1:c.*553-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000290846
  ensembl transcript: ENST00000290846
  gene symbol: TRMU
  hgvsc: ENST00000290846.4:c.1102-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000485559
  gene symbol: TRMU
  hgvsc: ENST00000485559.1:n.2156-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl protein: ENSP00000398488
  ensembl transcript: ENST00000453630
  gene symbol: TRMU
  hgvsc: ENST00000453630.1:c.*640-47G>A
  variant of: http://identifiers.org/hgnc/25481
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100416
  ensembl transcript: ENST00000470831
  gene symbol: TRMU
  hgvsc: ENST00000470831.1:n.1364-47G>A
  variant of: http://identifiers.org/hgnc/25481
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33463
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6743
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6419
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.635352286773795e-5
allele num: 64720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.997e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.674014e6

FS
type: SiteQuality
SIO_000300: 7.33e0

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.03e-1

QD
type: SiteQuality
SIO_000300: 1.149e1

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.090234857849197e-5
allele num: 64720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.149e1

DP
type: SiteQuality
SIO_000300: 1.674014e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
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allele count: 8
allele frequency: 6.962576153176675e-4
allele num: 11490
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.22e0

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

FS
type: SiteQuality
SIO_000300: 1.8264e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: -2.5e0

DP
type: SiteQuality
SIO_000300: 1.665733e6

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.093867953715735e-5
allele num: 64644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.704e0

DP
type: SiteQuality
SIO_000300: 1.665352e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.499e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

QD
type: SiteQuality
SIO_000300: 6.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.309691718718517e-3
allele num: 9926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.665063e6

FS
type: SiteQuality
SIO_000300: 7.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.64e0

MQRankSum
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SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ReadPosRankSum
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SIO_000300: 2.7e-2

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6554
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.547987616099071e-5
allele num: 64600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.33e-1

InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.549042691616581e-5
allele num: 64556
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.550195324610901e-5
allele num: 64508
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.184553423359394e-4
allele num: 8442
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6314
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African
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allele count: 0
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South Asian
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.223840411210378e-4
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.185395922238028e-4
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.647416036683604e-5
allele num: 64552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.772e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 1.687516e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.185395922238028e-4
allele num: 8436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
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QD
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SIO_000300: 1.266e1

FS
type: SiteQuality
SIO_000300: 1.772e0

BaseQRankSum
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SIO_000300: 2.45e0

InbreedingCoeff
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SIO_000300: 4.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.687516e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.222643354933366e-4
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64878
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

DP
type: SiteQuality
SIO_000300: 1.742659e6

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 3.416e0

BaseQRankSum
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SIO_000300: -5.033e0

QD
type: SiteQuality
SIO_000300: 1.341e1

ReadPosRankSum
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SIO_000300: 1.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.861e1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.941e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 1.756127e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.112e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.132832080200501e-4
allele num: 6384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 1.769388e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

MQ
type: SiteQuality
SIO_000300: 5.127e1

FS
type: SiteQuality
SIO_000300: 1.139e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.215e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65514
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16434
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Latino
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allele count: 1
allele frequency: 8.732099196646873e-5
allele num: 11452
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.801101e6

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: 5.56e-1

BaseQRankSum
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SIO_000300: -1.22e0

MQ
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SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 1.434e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

European (Finnish)
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allele count: 0
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allele num: 6416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65632
num of homozygotes: 0

Latino
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
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Latino
type: Population
allele count: 1
allele frequency: 8.700191404210893e-5
allele num: 11494
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African
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South Asian
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allele count: 0
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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MQ
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8346
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65750
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.337e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.107e0

FS
type: SiteQuality
SIO_000300: 7.322e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.812537e6

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520265134239411e-5
allele num: 65778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.813943e6

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.619e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 5.997e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

MQ
type: SiteQuality
SIO_000300: 5.773e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

QD
type: SiteQuality
SIO_000300: 1.811e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 8388
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variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.754194303550527e-5
allele num: 10252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519710647092794e-5
allele num: 65802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 1.815174e6

FS
type: SiteQuality
SIO_000300: 2.955e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
SIO_000300: 2.077e1

GenotypeQuality
all individuals: 4020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

QD
type: SiteQuality
SIO_000300: 1.043e1

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

DP
type: SiteQuality
SIO_000300: 1.818443e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 8700
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65922
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.276e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

DP
type: SiteQuality
SIO_000300: 1.820014e6

MQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

MQ
type: SiteQuality
SIO_000300: 5.87e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

GenotypeQuality
all individuals: 606
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variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.742790335151988e-5
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.276e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.082e0

DP
type: SiteQuality
SIO_000300: 1.820014e6

MQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.87e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516576177621402e-5
allele num: 65938
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 5.724e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.820875e6

QD
type: SiteQuality
SIO_000300: 1.27e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65946
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.094e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.821588e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-2

QD
type: SiteQuality
SIO_000300: 1.317e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 4021
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 510
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GenotypeQuality
all individuals: 21
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.059871530723549e-5
allele num: 66008
num of homozygotes: 0

MQRankSum
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SIO_000300: -1.038e0

FS
type: SiteQuality
SIO_000300: 3.554e0

DP
type: SiteQuality
SIO_000300: 1.824156e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.744e0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

InbreedingCoeff
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SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

ReadPosRankSum
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SIO_000300: 9.5e-1

FS
type: SiteQuality
SIO_000300: 5.823e0

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.825102e6

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.444e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66080
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.418e0

ReadPosRankSum
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SIO_000300: 3.7e-2

DP
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SIO_000300: 1.826231e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.094e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-5
allele num: 66080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

DP
type: SiteQuality
SIO_000300: 1.826231e6

QD
type: SiteQuality
SIO_000300: 1.094e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 1.418e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.262e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51290508033526e-5
allele num: 66098
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 6.687e0

InbreedingCoeff
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SIO_000300: 3.0e-4

BaseQRankSum
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MQ
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QD
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DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.57e-1

ReadPosRankSum
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SIO_000300: 2.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.51290508033526e-5
allele num: 66098
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511944360447535e-5
allele num: 66140
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Other
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allele count: 0
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allele num: 900
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.828347e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.298e0

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ClippingRankSum
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SIO_000300: 5.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66176
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.829262e6

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.71e1

ClippingRankSum
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SIO_000300: 4.04e-1

MQRankSum
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SIO_000300: -6.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.11e0

GenotypeQuality
all individuals: 2821
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8704
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510756586898719e-5
allele num: 66192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.830622e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.04e1

FS
type: SiteQuality
SIO_000300: 1.805e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

GenotypeQuality
all individuals: 4029
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-4
allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.043026347594876e-5
allele num: 66192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.830622e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.04e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

FS
type: SiteQuality
SIO_000300: 1.805e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8565
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29486
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.531722054380665e-5
allele num: 66200
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.74e-1

DP
type: SiteQuality
SIO_000300: 1.830767e6

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.045e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

GenotypeQuality
all individuals: 8565
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4029
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variant carriers: 0

GenotypeQuality
all individuals: 1380
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variant carriers: 0

GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 1660
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8703
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021148036253776e-5
allele num: 66200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

DP
type: SiteQuality
SIO_000300: 1.830767e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.045e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
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variant carriers: 0

GenotypeQuality
all individuals: 8704
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variant carriers: 3

GenotypeQuality
all individuals: 22
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.667440061871617e-5
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020874241005347e-5
allele num: 66206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.452e0

DP
type: SiteQuality
SIO_000300: 1.830632e6

QD
type: SiteQuality
SIO_000300: 1.218e1

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4027
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021695775669306e-5
allele num: 66188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e0

FS
type: SiteQuality
SIO_000300: 2.795e0

MQ
type: SiteQuality
SIO_000300: 5.655e1

MQRankSum
type: SiteQuality
SIO_000300: -3.077e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

DP
type: SiteQuality
SIO_000300: 1.830541e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.16e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e0

QD
type: SiteQuality
SIO_000300: 2.58e0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 47
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.532406707961928e-5
allele num: 66190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.531e0

MQ
type: SiteQuality
SIO_000300: 5.139e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.830197e6

QD
type: SiteQuality
SIO_000300: 5.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 376
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GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 3420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8571
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66190
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.139e1

InbreedingCoeff
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SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.531e0

DP
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SIO_000300: 1.830197e6

VQSLOD
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SIO_000300: 1.57e0

ReadPosRankSum
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SIO_000300: -8.139999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.53e-1

QD
type: SiteQuality
SIO_000300: 5.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 1.37e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.530924678505818e-4
allele num: 6532
num of homozygotes: 0

Latino
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allele count: 11
allele frequency: 9.530410674059955e-4
allele num: 11542
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.53514739229025e-5
allele num: 66150
num of homozygotes: 0

South Asian
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QD
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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SIO_000300: 1.829994e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.07e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.511761504505049e-5
allele num: 66148
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.732801940738174e-4
allele num: 11542
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
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allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -1.256e0

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
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SIO_000300: -1.438e0

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

QD
type: SiteQuality
SIO_000300: 1.079e1

DP
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SIO_000300: 1.829506e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.512310205069264e-5
allele num: 66124
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 2.39e-1

VQSLOD
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ReadPosRankSum
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SIO_000300: 2.6e-1

DP
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SIO_000300: 1.828042e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.764e0

QD
type: SiteQuality
SIO_000300: 1.039e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66122
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.916e1

ClippingRankSum
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FS
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InbreedingCoeff
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DP
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66114
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
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allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ClippingRankSum
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DP
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 66096
num of homozygotes: 0

East Asian
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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Latino
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European (Finnish)
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Other
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BaseQRankSum
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MQRankSum
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66070
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South Asian
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African
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Other
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East Asian
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European (Finnish)
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Latino
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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Other
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East Asian
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QD
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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African
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DP
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BaseQRankSum
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FS
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MQ
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele num: 6476
num of homozygotes: 0

East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65986
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African
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Other
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South Asian
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Finnish)
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Other
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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InbreedingCoeff
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QD
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MQRankSum
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FS
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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African
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ReadPosRankSum
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QD
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FS
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MQ
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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Latino
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InbreedingCoeff
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1377
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519803033526855e-5
allele num: 65798
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.807111e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.492e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

QD
type: SiteQuality
SIO_000300: 2.554e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8111
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518971959777622e-5
allele num: 65834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

DP
type: SiteQuality
SIO_000300: 1.804283e6

MQ
type: SiteQuality
SIO_000300: 5.78e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

QD
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.349e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65834
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.804283e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.78e-1

QD
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.78e1

FS
type: SiteQuality
SIO_000300: 9.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

VQSLOD
type: SiteQuality
SIO_000300: -5.349e-1

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 643
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variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.159823706796567e-3
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.80278e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.806e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 8.159999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

GenotypeQuality
all individuals: 1294
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1646
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GenotypeQuality
all individuals: 24054
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042565491222199e-5
allele num: 65734
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

FS
type: SiteQuality
SIO_000300: 5.208e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 8.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.448e0

DP
type: SiteQuality
SIO_000300: 1.788089e6

GenotypeQuality
all individuals: 7545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 986
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.912e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.781852e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: -9.691e-1

QD
type: SiteQuality
SIO_000300: 1.753e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1361
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.613695765812859e-4
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.044e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

DP
type: SiteQuality
SIO_000300: 1.782031e6

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.588e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1620
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527697149317119e-5
allele num: 65458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

FS
type: SiteQuality
SIO_000300: 2.905e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.663e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.769587e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.281e0

GenotypeQuality
all individuals: 77
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.076810889645114e-5
allele num: 16456
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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VQSLOD
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -1.3e-3

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Latino
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East Asian
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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DP
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BaseQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.532707988474036e-5
allele num: 65244
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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East Asian
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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ReadPosRankSum
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: 1.9e-3

VQSLOD
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ClippingRankSum
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DP
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SIO_000300: 1.816143e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.533224985434363e-5
allele num: 65222
num of homozygotes: 0

African
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MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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DP
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