17-56772535-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772535
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772536
    reference: chr 17
allele count: 2
allele frequency: 1.6839836316791e-5
allele num: 118766
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1514dupA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1097dupA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.394dupA
  hgvsp: ENSP00000336701.4:p.Thr132AsnfsTer23
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.394dupA
  hgvsp: ENSP00000463121.1:p.Thr132AsnfsTer23
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.394dupA
  hgvsp: ENSP00000433332.1:p.Thr132AsnfsTer52
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1258dupA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.190dupA
  hgvsp: ENSP00000407282.1:p.Thr64AsnfsTer23
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.43dupA
  hgvsp: ENSP00000464056.1:p.Thr15AsnfsTer23
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.394dupA
  hgvsp: ENSP00000431637.1:p.Thr132AsnfsTer61
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.32dupA
  hgvsp: ENSP00000401741.1:p.Thr12AsnfsTer23
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.306dupA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.394dupA
  hgvsp: ENSP00000391450.2:p.Thr132AsnfsTer7
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr132AsnfsTer23
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

17-56772538-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772538
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772538
    reference: chr 17
allele count: 1
allele frequency: 8.445660619573662e-6
allele num: 118404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.392A>G
  hgvsp: ENSP00000463121.1:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.392A>G
  hgvsp: ENSP00000391450.2:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.392A>G
  hgvsp: ENSP00000431637.1:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.392A>G
  hgvsp: ENSP00000336701.4:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.392A>G
  hgvsp: ENSP00000433332.1:p.Lys131Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.41A>G
  hgvsp: ENSP00000464056.1:p.Lys14Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.188A>G
  hgvsp: ENSP00000407282.1:p.Lys63Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.30A>G
  hgvsp: ENSP00000401741.1:p.Lys11Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.304A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1095A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1256A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1516A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys131Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-56772542-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772542
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772542
    reference: chr 17
allele count: 2
allele frequency: 1.694714186452455e-5
allele num: 118014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.396A>C
  hgvsp: ENST00000482007.1:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1260A>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.396A>C
  hgvsp: ENST00000421782.2:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1512A>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.396A>C
  hgvsp: ENST00000583539.1:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1099A>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.396A>C
  hgvsp: ENST00000337432.4:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.45A>C
  hgvsp: ENST00000461271.1:c.45A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.192A>C
  hgvsp: ENST00000425173.1:c.192A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.396A>C
  hgvsp: ENST00000487525.1:c.396A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.34A>C
  hgvsp: ENST00000413590.1:c.34A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.308A>C
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr132Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS

17-56772542-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772542
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772542
    reference: chr 17
allele count: 1
allele frequency: 8.473570932262274e-6
allele num: 118014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.45A>T
  hgvsp: ENST00000461271.1:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.396A>T
  hgvsp: ENST00000482007.1:c.396A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1099A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.192A>T
  hgvsp: ENST00000425173.1:c.192A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.396A>T
  hgvsp: ENST00000583539.1:c.396A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.396A>T
  hgvsp: ENST00000487525.1:c.396A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1260A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.396A>T
  hgvsp: ENST00000337432.4:c.396A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.308A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.396A>T
  hgvsp: ENST00000421782.2:c.396A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1512A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.34A>T
  hgvsp: ENST00000413590.1:c.34A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr132Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

17-56772543-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772543
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772543
    reference: chr 17
allele count: 1
allele frequency: 8.484498820654664e-6
allele num: 117862
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1511C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.397C>T
  hgvsp: ENSP00000336701.4:p.Gln133Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1100C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.397C>T
  hgvsp: ENSP00000433332.1:p.Gln133Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.309C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.397C>T
  hgvsp: ENSP00000391450.2:p.Gln133Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.46C>T
  hgvsp: ENSP00000464056.1:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.397C>T
  hgvsp: ENSP00000431637.1:p.Gln133Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.397C>T
  hgvsp: ENSP00000463121.1:p.Gln133Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.193C>T
  hgvsp: ENSP00000407282.1:p.Gln65Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.35C>T
  hgvsp: ENSP00000401741.1:p.Gln13Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1261C>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln133Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

17-56772550-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772550
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772550
    reference: chr 17
allele count: 1
allele frequency: 8.541752084187508e-6
allele num: 117072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404G>A
  hgvsp: ENST00000482007.1:c.404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.404G>A
  hgvsp: ENSP00000391450.2:p.Trp135Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404G>A
  hgvsp: ENSP00000336701.4:p.Cys135Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53G>A
  hgvsp: ENSP00000464056.1:p.Cys18Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1268G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42G>A
  hgvsp: ENSP00000401741.1:p.Cys15Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200G>A
  hgvsp: ENSP00000407282.1:p.Cys67Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1504G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404G>A
  hgvsp: ENSP00000463121.1:p.Cys135Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404G>A
  hgvsp: ENST00000487525.1:c.404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp135Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

17-56772551-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772551
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772551
    reference: chr 17
allele count: 1
allele frequency: 8.572653236176597e-6
allele num: 116650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.405G>A
  hgvsp: ENSP00000391450.2:p.Trp135Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1269G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1503G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+1G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+1G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.404+1G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-56772551-GTAAAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772551
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772546
    reference: chr 17
allele count: 1
allele frequency: 8.572653236176597e-6
allele num: 116650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+6_42+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+6_404+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+6_404+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*2_*6delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+6_316+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+6_53+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+6_200+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+6_*1107+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+6_404+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+6_404+10delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1274_*1278delATAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1498_127-1494delATAAA
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.404+6_404+10delATAAA
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: GTAAAA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS

17-56772563-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772563
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772563
    reference: chr 17
allele count: 13
allele frequency: 1.132996339550288e-4
allele num: 114740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1491G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*9G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1281G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+13G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+13G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12231
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23394
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4496
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

17-56772565-TCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772565
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772562
    reference: chr 17
allele count: 2
allele frequency: 1.749046769510617e-5
allele num: 114348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+18_200+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1286_*1288delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*14_*16delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+18_404+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+18_316+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+18_42+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+18_*1107+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+18_53+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+18_404+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+18_404+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+18_404+20delCCT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1486_127-1484delCCT
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12122
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: TCTC
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

17-56772575-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772575
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772575
    reference: chr 17
allele count: 1
allele frequency: 8.870281010502412e-6
allele num: 112736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1293A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1479A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*21A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+25A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+25A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

17-56772582-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772582
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772582
    reference: chr 17
allele count: 1
allele frequency: 8.959931187728478e-6
allele num: 111608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1300G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1472G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*28G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+32G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2041
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

17-56772591-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772591
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772589
    reference: chr 17
allele count: 13
allele frequency: 1.18332423083925e-4
allele num: 109860
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+44_404+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+44_316+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+44_404+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1460_127-1459delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*40_*41delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+44_404+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+44_*1107+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+44_53+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1312_*1313delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+44_200+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+44_42+45delAT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+44_404+45delAT
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4132
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9203
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: CAT
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-56772592-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772592
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772592
    reference: chr 17
allele count: 3
allele frequency: 2.732688418866481e-5
allele num: 109782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*38A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1462A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1310A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+42A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+42A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8981
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14218
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

17-56772594-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772594
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772594
    reference: chr 17
allele count: 2
allele frequency: 1.827285019917407e-5
allele num: 109452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1460A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*40A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+44A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1312A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+44A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

17-56772595-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772595
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772595
    reference: chr 17
allele count: 1
allele frequency: 9.147791723078049e-6
allele num: 109316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*41T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1313T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1459T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+45T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+45T>C
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

17-56772598-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56772598
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56772598
    reference: chr 17
allele count: 2
allele frequency: 1.837458427503078e-5
allele num: 108846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1107+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.316+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-1456T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.53+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000391450
  ensembl transcript: ENST00000421782
  gene symbol: RAD51C
  hgvsc: ENST00000421782.2:c.*44T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.42+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000436761
  ensembl transcript: ENST00000486827
  gene symbol: RAD51C
  hgvsc: ENST00000486827.1:c.*1316T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.404+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.200+48T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.404+48T>C
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6490
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

17-56774004-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774004
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774004
    reference: chr 17
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1454A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-50A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1454A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-50A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5899
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56027
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

17-56774005-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774005
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774005
    reference: chr 17
allele count: 297
allele frequency: 2.446296784396416e-3
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1455C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-49C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1455C>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 9885
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 4.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 5.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

17-56774010-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774010
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774010
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1460G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-44G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1460G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9873
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

17-56774030-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774030
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774030
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1480T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-24T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1480T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-24T>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-56774032-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774032
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774032
    reference: chr 17
allele count: 33
allele frequency: 2.718062762540153e-4
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1482T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-22T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1482T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-22T>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9892
  bin: 9.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

17-56774044-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774044
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774044
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1494C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1494C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-10C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-10C>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9891
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

17-56774051-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774051
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774051
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.405-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1501C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.127-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.201-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.317-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.405-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.43-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1501C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.54-3C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1108-3C>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9892
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: c.405-3C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

17-56774055-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774055
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774055
    reference: chr 17
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.202A>T
  hgvsp: ENSP00000407282.1:p.Met68Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.55A>T
  hgvsp: ENSP00000464056.1:p.Met19Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.128A>T
  hgvsp: ENST00000584617.1:c.128A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1505A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1505A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1109A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.406A>T
  hgvsp: ENSP00000336701.4:p.Met136Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.318A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.406A>T
  hgvsp: ENSP00000463121.1:p.Met136Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.44A>T
  hgvsp: ENSP00000401741.1:p.Met16Leu
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9894
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met136Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

17-56774057-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774057
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774057
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1507G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.130G>A
  hgvsp: ENSP00000463473.1:p.Cys44Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.204G>A
  hgvsp: ENSP00000407282.1:p.Met68Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1507G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.320G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.408G>A
  hgvsp: ENSP00000463121.1:p.Met136Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.57G>A
  hgvsp: ENSP00000464056.1:p.Met19Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.408G>A
  hgvsp: ENSP00000336701.4:p.Met136Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1111G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.46G>A
  hgvsp: ENSP00000401741.1:p.Met16Ile
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met136Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-56774068-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774068
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774068
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.68T>A
  hgvsp: ENSP00000464056.1:p.Val23Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.215T>A
  hgvsp: ENSP00000407282.1:p.Val72Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1122T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.141T>A
  hgvsp: ENSP00000463473.1:p.Ter48LysextTer30
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.57T>A
  hgvsp: ENSP00000401741.1:p.Val20Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1518T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.419T>A
  hgvsp: ENSP00000336701.4:p.Val140Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1518T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.331T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.419T>A
  hgvsp: ENSP00000463121.1:p.Val140Glu
  variant of: http://identifiers.org/hgnc/9820
canonical: false
consequence: stop lost
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ter48LysextTer30
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

17-56774077-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774077
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774077
    reference: chr 17
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.340A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1131A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.224A>G
  hgvsp: ENSP00000407282.1:p.Gln75Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.66A>G
  hgvsp: ENSP00000401741.1:p.Gln23Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1527A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*7A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.428A>G
  hgvsp: ENSP00000336701.4:p.Gln143Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.428A>G
  hgvsp: ENSP00000463121.1:p.Gln143Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.77A>G
  hgvsp: ENSP00000464056.1:p.Gln26Arg
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1527A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9899
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln143Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

17-56774080-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774080
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774080
    reference: chr 17
allele count: 4
allele frequency: 3.294567258590584e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.431T>C
  hgvsp: ENSP00000463121.1:p.Ile144Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.431T>C
  hgvsp: ENSP00000336701.4:p.Ile144Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.69T>C
  hgvsp: ENSP00000401741.1:p.Ile24Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.227T>C
  hgvsp: ENSP00000407282.1:p.Ile76Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.343T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*10T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1530T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1134T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.80T>C
  hgvsp: ENSP00000464056.1:p.Ile27Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1530T>C
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile144Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-56774089-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774089
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774089
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.236G>A
  hgvsp: ENSP00000407282.1:p.Cys79Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1539G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.440G>A
  hgvsp: ENSP00000463121.1:p.Cys147Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1143G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.440G>A
  hgvsp: ENSP00000336701.4:p.Cys147Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1539G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*19G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.78G>A
  hgvsp: ENSP00000401741.1:p.Cys27Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.352G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.89G>A
  hgvsp: ENSP00000464056.1:p.Cys30Tyr
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5589
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys147Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-56774100-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774100
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774100
    reference: chr 17
allele count: 3
allele frequency: 2.470966147763776e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.363G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1550G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.89G>A
  hgvsp: ENSP00000401741.1:p.Val31Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.451G>A
  hgvsp: ENSP00000463121.1:p.Val151Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.451G>A
  hgvsp: ENSP00000336701.4:p.Val151Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.100G>A
  hgvsp: ENSP00000464056.1:p.Val34Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1550G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.247G>A
  hgvsp: ENSP00000407282.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1154G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*30G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56039
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Val151Met
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

17-56774102-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774102
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774102
    reference: chr 17
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.102G>A
  hgvsp: ENST00000461271.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1156G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1552G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1552G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.91G>A
  hgvsp: ENST00000413590.1:c.91G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.249G>A
  hgvsp: ENST00000425173.1:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.453G>A
  hgvsp: ENST00000337432.4:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.365G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.453G>A
  hgvsp: ENST00000583539.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9906
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val151Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

17-56774107-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774107
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774107
    reference: chr 17
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*37G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.458G>A
  hgvsp: ENSP00000336701.4:p.Gly153Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.107G>A
  hgvsp: ENSP00000464056.1:p.Gly36Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.254G>A
  hgvsp: ENSP00000407282.1:p.Gly85Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.458G>A
  hgvsp: ENSP00000463121.1:p.Gly153Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.96G>A
  hgvsp: ENSP00000401741.1:p.Gly33Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1161G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1557G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.370G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1557G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly153Asp
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-56774108-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774108
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774108
    reference: chr 17
allele count: 26472
allele frequency: 4.288908330903082e-1
allele num: 61722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1558T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.97T>G
  hgvsp: ENST00000413590.1:c.97T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.255T>G
  hgvsp: ENST00000425173.1:c.255T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1162T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.459T>G
  hgvsp: ENST00000337432.4:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.371T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.108T>G
  hgvsp: ENST00000461271.1:c.108T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1558T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.459T>G
  hgvsp: ENST00000583539.1:c.459T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 849
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 8.25e1
  variant carriers: 1005
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 6.25e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 5.75e1
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 650
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 6.75e1
  variant carriers: 506
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 8.75e1
  variant carriers: 1209
genotype depth: GenotypeDepth
  all individuals: 38008
  bin: 9.75e1
  variant carriers: 20607
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 9.25e1
  variant carriers: 1313
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 7.5e0
  variant carriers: 190
hgvs: p.Gly153Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

17-56774110-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774110
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774110
    reference: chr 17
allele count: 4642
allele frequency: 4.041301016854715e-2
allele num: 114864
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.461A>G
  hgvsp: ENSP00000336701.4:p.Glu154Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1560A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.110A>G
  hgvsp: ENSP00000464056.1:p.Glu37Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.99A>G
  hgvsp: ENSP00000401741.1:p.Glu34Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.461A>G
  hgvsp: ENSP00000463121.1:p.Glu154Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*40A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.257A>G
  hgvsp: ENSP00000407282.1:p.Glu86Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1164A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1560A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.373A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 4.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.25e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 5.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 5.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 8.75e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 9.75e1
  variant carriers: 2757
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 16
hgvs: p.Glu154Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

17-56774110-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774110
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774110
    reference: chr 17
allele count: 1
allele frequency: 8.705947903607744e-6
allele num: 114864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.373A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*40A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.461A>T
  hgvsp: ENSP00000463121.1:p.Glu154Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1560A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.257A>T
  hgvsp: ENSP00000407282.1:p.Glu86Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1560A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.110A>T
  hgvsp: ENSP00000464056.1:p.Glu37Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.461A>T
  hgvsp: ENSP00000336701.4:p.Glu154Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1164A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.99A>T
  hgvsp: ENSP00000401741.1:p.Glu34Val
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu154Val
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

17-56774111-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774111
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774111
    reference: chr 17
allele count: 945
allele frequency: 7.79137260075193e-3
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.258A>G
  hgvsp: ENST00000425173.1:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.462A>G
  hgvsp: ENST00000337432.4:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.374A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.462A>G
  hgvsp: ENST00000583539.1:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.111A>G
  hgvsp: ENST00000461271.1:c.111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1561A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*41A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1561A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.100A>G
  hgvsp: ENST00000413590.1:c.100A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1165A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 9.75e1
  variant carriers: 878
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu154Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

17-56774112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774112
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774112
    reference: chr 17
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1562G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.259G>A
  hgvsp: ENSP00000407282.1:p.Ala87Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.463G>A
  hgvsp: ENSP00000336701.4:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.112G>A
  hgvsp: ENSP00000464056.1:p.Ala38Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1562G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.463G>A
  hgvsp: ENSP00000463121.1:p.Ala155Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.375G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1166G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*42G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.101G>A
  hgvsp: ENSP00000401741.1:p.Ala35Thr
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala155Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/17-56774113-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774113
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774113
    reference: chr 17
allele count: 16
allele frequency: 1.31974001121779e-4
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.102C>A
  hgvsp: ENSP00000401741.1:p.Ala35Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.376C>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.464C>A
  hgvsp: ENSP00000336701.4:p.Ala155Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*43C>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.260C>A
  hgvsp: ENSP00000407282.1:p.Ala87Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.464C>A
  hgvsp: ENSP00000463121.1:p.Ala155Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1563C>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1167C>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.113C>A
  hgvsp: ENSP00000464056.1:p.Ala38Glu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1563C>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala155Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

17-56774113-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774113
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774113
    reference: chr 17
allele count: 4
allele frequency: 3.299350028044475e-5
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*43C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.464C>G
  hgvsp: ENSP00000336701.4:p.Ala155Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1563C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.102C>G
  hgvsp: ENSP00000401741.1:p.Ala35Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.376C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1563C>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.464C>G
  hgvsp: ENSP00000463121.1:p.Ala155Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.260C>G
  hgvsp: ENSP00000407282.1:p.Ala87Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.113C>G
  hgvsp: ENSP00000464056.1:p.Ala38Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1167C>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala155Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

17-56774115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774115
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774115
    reference: chr 17
allele count: 1
allele frequency: 8.383072899201931e-6
allele num: 119288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.466G>A
  hgvsp: ENSP00000463121.1:p.Val156Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.466G>A
  hgvsp: ENSP00000336701.4:p.Val156Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1565G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.262G>A
  hgvsp: ENSP00000407282.1:p.Val88Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.378G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1169G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*45G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1565G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.115G>A
  hgvsp: ENSP00000464056.1:p.Val39Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.104G>A
  hgvsp: ENSP00000401741.1:p.Val36Ile
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val156Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

17-56774116-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774116
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774116
    reference: chr 17
allele count: 6
allele frequency: 5.275838418655365e-5
allele num: 113726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1566T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1566T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.379T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.263T>A
  hgvsp: ENSP00000407282.1:p.Val88Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.467T>A
  hgvsp: ENSP00000463121.1:p.Val156Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.116T>A
  hgvsp: ENSP00000464056.1:p.Val39Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.105T>A
  hgvsp: ENSP00000401741.1:p.Val36Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*46T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.467T>A
  hgvsp: ENSP00000336701.4:p.Val156Asp
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1170T>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val156Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

17-56774116-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774116
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774116
    reference: chr 17
allele count: 16
allele frequency: 1.406890244974764e-4
allele num: 113726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.116T>G
  hgvsp: ENSP00000464056.1:p.Val39Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.263T>G
  hgvsp: ENSP00000407282.1:p.Val88Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.379T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.467T>G
  hgvsp: ENSP00000463121.1:p.Val156Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*46T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1566T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.105T>G
  hgvsp: ENSP00000401741.1:p.Val36Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1170T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.467T>G
  hgvsp: ENSP00000336701.4:p.Val156Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1566T>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val156Gly
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-56774116-TTTTTATTGATACAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774116
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774102
    reference: chr 17
allele count: 1
allele frequency: 8.793064031092274e-6
allele num: 113726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsp: ENSP00000407282.1:p.Phe89GlyfsTer6
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsp: ENSP00000336701.4:p.Phe157GlyfsTer6
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsp: ENSP00000463121.1:p.Phe157GlyfsTer6
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsp: ENSP00000401741.1:p.Phe37GlyfsTer6
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsp: ENSP00000464056.1:p.Phe40GlyfsTer6
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Phe157GlyfsTer6
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: TTTTTATTGATACAG
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ

17-56774117-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774117
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774117
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1567T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.117T>G
  hgvsp: ENST00000461271.1:c.117T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.468T>G
  hgvsp: ENST00000337432.4:c.468T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.380T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*47T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.106T>G
  hgvsp: ENST00000413590.1:c.106T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.468T>G
  hgvsp: ENST00000583539.1:c.468T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1567T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.264T>G
  hgvsp: ENST00000425173.1:c.264T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1171T>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val156Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

17-56774118-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774118
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774118
    reference: chr 17
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.469T>A
  hgvsp: ENSP00000336701.4:p.Phe157Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*48T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.265T>A
  hgvsp: ENSP00000407282.1:p.Phe89Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1172T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1568T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.118T>A
  hgvsp: ENSP00000464056.1:p.Phe40Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.107T>A
  hgvsp: ENSP00000401741.1:p.Phe37Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.381T>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.469T>A
  hgvsp: ENSP00000463121.1:p.Phe157Ile
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1568T>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe157Ile
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

17-56774121-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774121
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774121
    reference: chr 17
allele count: 5
allele frequency: 4.273431223397891e-5
allele num: 117002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.384A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.121A>T
  hgvsp: ENSP00000464056.1:p.Ile41Phe
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.472A>T
  hgvsp: ENSP00000463121.1:p.Ile158Phe
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1571A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.472A>T
  hgvsp: ENSP00000336701.4:p.Ile158Phe
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1175A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.110A>T
  hgvsp: ENSP00000401741.1:p.Ile38Phe
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1571A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.268A>T
  hgvsp: ENSP00000407282.1:p.Ile90Phe
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*51A>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile158Phe
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

17-56774124-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774124
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774124
    reference: chr 17
allele count: 3
allele frequency: 2.493475406020912e-5
allele num: 120314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.124G>T
  hgvsp: ENSP00000464056.1:p.Asp42Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.113G>T
  hgvsp: ENSP00000401741.1:p.Asp39Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.475G>T
  hgvsp: ENSP00000463121.1:p.Asp159Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*54G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.271G>T
  hgvsp: ENSP00000407282.1:p.Asp91Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1574G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1574G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.387G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.475G>T
  hgvsp: ENSP00000336701.4:p.Asp159Tyr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1178G>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4707
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20341
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp159Tyr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

17-56774126-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774126
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774126
    reference: chr 17
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.126T>C
  hgvsp: ENST00000461271.1:c.126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.389T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.477T>C
  hgvsp: ENST00000337432.4:c.477T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1576T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*56T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1576T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.273T>C
  hgvsp: ENST00000425173.1:c.273T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1180T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.477T>C
  hgvsp: ENST00000583539.1:c.477T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.115T>C
  hgvsp: ENST00000413590.1:c.115T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9888
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp159Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

17-56774130-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774130
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774130
    reference: chr 17
allele count: 3
allele frequency: 2.472065658063878e-5
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*60G>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.130G>C
  hgvsp: ENSP00000464056.1:p.Glu44Gln
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.119G>C
  hgvsp: ENSP00000401741.1:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.277G>C
  hgvsp: ENSP00000407282.1:p.Glu93Gln
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1184G>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.393G>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1580G>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.481G>C
  hgvsp: ENSP00000336701.4:p.Glu161Gln
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.481G>C
  hgvsp: ENSP00000463121.1:p.Glu161Gln
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1580G>C
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu161Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

17-56774134-G-GAAGTTAGGTATCACTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774134
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774150
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: GAAGTTAGGTATCACTA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsp: ENSP00000401741.1:p.Phe44Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsp: ENSP00000463121.1:p.Phe164Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsp: ENSP00000336701.4:p.Phe164Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsp: ENSP00000464056.1:p.Phe47Ter
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsp: ENSP00000407282.1:p.Phe96Ter
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe164Ter
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

17-56774136-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774136
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774136
    reference: chr 17
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*66A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.125A>G
  hgvsp: ENSP00000401741.1:p.Ser43Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1586A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1190A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.487A>G
  hgvsp: ENSP00000336701.4:p.Ser163Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1586A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.136A>G
  hgvsp: ENSP00000464056.1:p.Ser46Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.399A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.283A>G
  hgvsp: ENSP00000407282.1:p.Ser95Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.487A>G
  hgvsp: ENSP00000463121.1:p.Ser163Gly
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16095
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4803
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13303
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser163Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

17-56774141-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774141
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774141
    reference: chr 17
allele count: 4
allele frequency: 3.294838635277837e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*71T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.492T>G
  hgvsp: ENSP00000336701.4:p.Phe164Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1591T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.288T>G
  hgvsp: ENSP00000407282.1:p.Phe96Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.404T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1591T>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.492T>G
  hgvsp: ENSP00000463121.1:p.Phe164Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.141T>G
  hgvsp: ENSP00000464056.1:p.Phe47Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.130T>G
  hgvsp: ENSP00000401741.1:p.Phe44Leu
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1195T>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11138
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe164Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

17-56774145-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774145
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774144
    reference: chr 17
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1597delT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.498delT
  hgvsp: ENSP00000463121.1:p.Asp167IlefsTer4
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.498delT
  hgvsp: ENSP00000336701.4:p.Asp167IlefsTer4
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.136delT
  hgvsp: ENSP00000401741.1:p.Asp47IlefsTer4
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.147delT
  hgvsp: ENSP00000464056.1:p.Asp50IlefsTer4
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*77delT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.294delT
  hgvsp: ENSP00000407282.1:p.Asp99IlefsTer4
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1597delT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.410delT
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1201delT
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp167IlefsTer4
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: GT
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

17-56774146-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774146
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774146
    reference: chr 17
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*76T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.135T>C
  hgvsp: ENSP00000401741.1:p.Val46Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1596T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1200T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.497T>C
  hgvsp: ENSP00000336701.4:p.Val166Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1596T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.497T>C
  hgvsp: ENSP00000463121.1:p.Val166Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.146T>C
  hgvsp: ENSP00000464056.1:p.Val49Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.409T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.293T>C
  hgvsp: ENSP00000407282.1:p.Val98Ala
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val166Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

17-56774151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774151
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774151
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.151A>G
  hgvsp: ENSP00000464056.1:p.Arg51Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.414A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1601A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.298A>G
  hgvsp: ENSP00000407282.1:p.Arg100Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*81A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1601A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1205A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.502A>G
  hgvsp: ENSP00000336701.4:p.Arg168Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.140A>G
  hgvsp: ENSP00000401741.1:p.Arg48Gly
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.502A>G
  hgvsp: ENSP00000463121.1:p.Arg168Gly
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13270
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg168Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

17-56774155-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774155
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774155
    reference: chr 17
allele count: 20
allele frequency: 1.647283629295292e-4
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*85T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.506T>C
  hgvsp: ENSP00000336701.4:p.Val169Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.144T>C
  hgvsp: ENSP00000401741.1:p.Val49Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1605T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.302T>C
  hgvsp: ENSP00000407282.1:p.Val101Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.506T>C
  hgvsp: ENSP00000463121.1:p.Val169Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.418T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.155T>C
  hgvsp: ENSP00000464056.1:p.Val52Ala
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1209T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1605T>C
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9926
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9228
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val169Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-56774162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774162
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774162
    reference: chr 17
allele count: 5
allele frequency: 4.11820907323823e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.151C>T
  hgvsp: ENST00000413590.1:c.151C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.309C>T
  hgvsp: ENST00000425173.1:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1612C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.162C>T
  hgvsp: ENST00000461271.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1612C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.513C>T
  hgvsp: ENST00000337432.4:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*92C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.513C>T
  hgvsp: ENST00000583539.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1216C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.425C>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp171Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

17-56774172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774172
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774172
    reference: chr 17
allele count: 6
allele frequency: 4.941850887885876e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1226G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.161G>A
  hgvsp: ENSP00000401741.1:p.Ala55Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.319G>A
  hgvsp: ENSP00000407282.1:p.Ala107Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1622G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.523G>A
  hgvsp: ENSP00000336701.4:p.Ala175Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.523G>A
  hgvsp: ENSP00000463121.1:p.Ala175Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.172G>A
  hgvsp: ENSP00000464056.1:p.Ala58Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1622G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.435G>A
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*102G>A
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala175Thr
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

17-56774172-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774172
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774173
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.525dupC
  hgvsp: ENSP00000463121.1:p.Cys176LeufsTer27
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1624dupC
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.174dupC
  hgvsp: ENSP00000464056.1:p.Cys59LeufsTer27
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1228dupC
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.321dupC
  hgvsp: ENSP00000407282.1:p.Cys108LeufsTer27
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.525dupC
  hgvsp: ENSP00000336701.4:p.Cys176LeufsTer27
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*104dupC
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.437dupC
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.163dupC
  hgvsp: ENSP00000401741.1:p.Cys56LeufsTer27
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1624dupC
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys176LeufsTer27
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

17-56774186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774186
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774186
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.175C>T
  hgvsp: ENST00000413590.1:c.175C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1240C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1636C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.537C>T
  hgvsp: ENST00000337432.4:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.333C>T
  hgvsp: ENST00000425173.1:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1636C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.537C>T
  hgvsp: ENST00000583539.1:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*116C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.449C>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.186C>T
  hgvsp: ENST00000461271.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His179His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

17-56774192-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774192
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774192
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.181G>T
  hgvsp: ENSP00000401741.1:p.Gln61His
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.339G>T
  hgvsp: ENSP00000407282.1:p.Gln113His
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1642G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.543G>T
  hgvsp: ENSP00000336701.4:p.Gln181His
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*122G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.192G>T
  hgvsp: ENSP00000464056.1:p.Gln64His
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1642G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.543G>T
  hgvsp: ENSP00000463121.1:p.Gln181His
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1246G>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.455G>T
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln181His
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

17-56774196-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774196
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774196
    reference: chr 17
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.196A>G
  hgvsp: ENSP00000464056.1:p.Ile66Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.459A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.185A>G
  hgvsp: ENSP00000401741.1:p.Ile63Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*126A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.343A>G
  hgvsp: ENSP00000407282.1:p.Ile115Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1250A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.547A>G
  hgvsp: ENSP00000336701.4:p.Ile183Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1646A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.547A>G
  hgvsp: ENSP00000463121.1:p.Ile183Val
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1646A>G
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile183Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-56774197-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774197
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774197
    reference: chr 17
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.548T>C
  hgvsp: ENSP00000336701.4:p.Ile183Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*127T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.460T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.186T>C
  hgvsp: ENSP00000401741.1:p.Ile63Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1647T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.548T>C
  hgvsp: ENSP00000463121.1:p.Ile183Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.344T>C
  hgvsp: ENSP00000407282.1:p.Ile115Thr
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1251T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1647T>C
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.197T>C
  hgvsp: ENSP00000464056.1:p.Ile66Thr
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile183Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

17-56774201-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774201
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774201
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.190A>G
  hgvsp: ENST00000413590.1:c.190A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.552A>G
  hgvsp: ENST00000583539.1:c.552A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.348A>G
  hgvsp: ENST00000425173.1:c.348A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1651A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.464A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1255A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1651A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.201A>G
  hgvsp: ENST00000461271.1:c.201A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*131A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.552A>G
  hgvsp: ENST00000337432.4:c.552A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala184Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

17-56774202-G-GAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774202
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774205
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: GAAA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*135_*137dupAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.194_196dupAAA
  hgvsp: ENSP00000401741.1:p.Lys66dup
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1655_404+1657dupAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.352_354dupAAA
  hgvsp: ENSP00000407282.1:p.Lys118dup
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.556_558dupAAA
  hgvsp: ENSP00000463121.1:p.Lys186dup
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1655_404+1657dupAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.468_470dupAAA
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.556_558dupAAA
  hgvsp: ENSP00000336701.4:p.Lys186dup
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.205_207dupAAA
  hgvsp: ENSP00000464056.1:p.Lys69dup
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1259_*1261dupAAA
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys186dup
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

17-56774207-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774207
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774207
    reference: chr 17
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.354A>G
  hgvsp: ENST00000425173.1:c.354A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*137A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1657A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.207A>G
  hgvsp: ENST00000461271.1:c.207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1657A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1261A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.558A>G
  hgvsp: ENST00000337432.4:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.558A>G
  hgvsp: ENST00000583539.1:c.558A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.470A>G
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.196A>G
  hgvsp: ENST00000413590.1:c.196A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys186Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

17-56774212-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56774212
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56774212
    reference: chr 17
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000108384
  ensembl transcript: ENST00000487921
  gene symbol: RAD51C
  hgvsc: ENST00000487921.1:n.475A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463473
  ensembl transcript: ENST00000584617
  gene symbol: RAD51C
  hgvsc: ENST00000584617.1:c.*142A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000407282
  ensembl transcript: ENST00000425173
  gene symbol: RAD51C
  hgvsc: ENST00000425173.1:c.359A>T
  hgvsp: ENSP00000407282.1:p.Lys120Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000401741
  ensembl transcript: ENST00000413590
  gene symbol: RAD51C
  hgvsc: ENST00000413590.1:c.201A>T
  hgvsp: ENSP00000401741.1:p.Lys68Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000432421
  ensembl transcript: ENST00000475762
  gene symbol: RAD51C
  hgvsc: ENST00000475762.1:c.*1266A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000431637
  ensembl transcript: ENST00000487525
  gene symbol: RAD51C
  hgvsc: ENST00000487525.1:c.404+1662A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000463121
  ensembl transcript: ENST00000583539
  gene symbol: RAD51C
  hgvsc: ENST00000583539.1:c.563A>T
  hgvsp: ENSP00000463121.1:p.Lys188Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000433332
  ensembl transcript: ENST00000482007
  gene symbol: RAD51C
  hgvsc: ENST00000482007.1:c.404+1662A>T
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000336701
  ensembl transcript: ENST00000337432
  gene symbol: RAD51C
  hgvsc: ENST00000337432.4:c.563A>T
  hgvsp: ENSP00000336701.4:p.Lys188Met
  variant of: http://identifiers.org/hgnc/9820
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000108384
  ensembl protein: ENSP00000464056
  ensembl transcript: ENST00000461271
  gene symbol: RAD51C
  hgvsc: ENST00000461271.1:c.212A>T
  hgvsp: ENSP00000464056.1:p.Lys71Met
  variant of: http://identifiers.org/hgnc/9820
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20500
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys188Met
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

17-56774217-G-A
type: Variant
location: Region
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
canonical: true
consequence: missense
filter: PASS
hgvs: p.Glu190Lys
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 202
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 744
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1079
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4742
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8883
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.356823002592505e-4
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

VQSLOD
type: SiteQuality
SIO_000300: -4.405e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

FS
type: SiteQuality
SIO_000300: 1.3736e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 7.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.21e-1

DP
type: SiteQuality
SIO_000300: 1.830725e6

GenotypeDepth
all individuals: 527
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 244
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4739
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.132711885195633e-5
allele num: 16306
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.251e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

VQSLOD
type: SiteQuality
SIO_000300: 8.080000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.823038e6

QD
type: SiteQuality
SIO_000300: 1.448e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeDepth
all individuals: 358
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 742
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2633
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4735
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8769
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64706
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.747335313646689e-4
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.071e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.71e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

DP
type: SiteQuality
SIO_000300: 1.815357e6

FS
type: SiteQuality
SIO_000300: 5.35e-1

GenotypeDepth
all individuals: 244
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 527
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4735
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8769
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2633
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32681
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545451735542299e-5
allele num: 64706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

QD
type: SiteQuality
SIO_000300: 1.071e1

FS
type: SiteQuality
SIO_000300: 5.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e0

DP
type: SiteQuality
SIO_000300: 1.815357e6

VQSLOD
type: SiteQuality
SIO_000300: 4.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 2711
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.547173314354674e-5
allele num: 64634
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.205e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

BaseQRankSum
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SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.812769e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557389814670612e-5
allele num: 64210
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
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SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 5.118e0

VQSLOD
type: SiteQuality
SIO_000300: 3.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

DP
type: SiteQuality
SIO_000300: 1.795501e6

QD
type: SiteQuality
SIO_000300: 1.051e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 322
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64026
num of homozygotes: 0

South Asian
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allele num: 15786
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
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SIO_000300: 1.785771e6

MQRankSum
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SIO_000300: 4.98e-1

ReadPosRankSum
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BaseQRankSum
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FS
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SIO_000300: 2.256e0

VQSLOD
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SIO_000300: 2.06e0

QD
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SIO_000300: 9.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 9538
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64026
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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ReadPosRankSum
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

FS
type: SiteQuality
SIO_000300: 2.256e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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allele num: 9208
num of homozygotes: 0

South Asian
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allele count: 13
allele frequency: 8.547008547008547e-4
allele num: 15210
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

MQRankSum
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InbreedingCoeff
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DP
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MQ
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ClippingRankSum
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BaseQRankSum
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FS
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
type: Population
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 62938
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East Asian
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European (Finnish)
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South Asian
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MQ
type: SiteQuality
SIO_000300: 5.703e1

DP
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
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Other
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8326
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VQSLOD
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DP
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FS
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Other
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.623060442770889e-5
allele num: 61612
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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European (Non-Finnish)
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allele frequency: 1.80623973727422e-4
allele num: 60900
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 2.233139794551139e-4
allele num: 13434
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BaseQRankSum
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SIO_000300: 1.96e0

InbreedingCoeff
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QD
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ClippingRankSum
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FS
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VQSLOD
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DP
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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allele num: 60698
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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East Asian
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Latino
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allele num: 11258
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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FS
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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FS
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ReadPosRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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Latino
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African
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European (Finnish)
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DP
type: SiteQuality
SIO_000300: 4.348708e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.62e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 3.287e0

VQSLOD
type: SiteQuality
SIO_000300: -4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.358e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 528
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 297

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.295560545862843e-3
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 278
allele frequency: 2.671535652508168e-2
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

DP
type: SiteQuality
SIO_000300: 4.349233e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.026e0

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

FS
type: SiteQuality
SIO_000300: 1.271e0

QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.531e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e0

MQ
type: SiteQuality
SIO_000300: 5.927e1

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

DP
type: SiteQuality
SIO_000300: 4.347983e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.574e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.752e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 999
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GenotypeQuality
all individuals: 56024
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.348595e6

QD
type: SiteQuality
SIO_000300: 1.513e1

FS
type: SiteQuality
SIO_000300: 1.827e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.286e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 56027
bin: 9.75e1
variant carriers: 33

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.813784764207981e-3
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.4983967155144e-4
allele num: 66738
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.98e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 4.34981e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

QD
type: SiteQuality
SIO_000300: 1.377e1

FS
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
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BaseQRankSum
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SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-2

MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.914e1

BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.691e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.176e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
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DP
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ClippingRankSum
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VQSLOD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
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SIO_000300: 2.74e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 56027
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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InbreedingCoeff
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MQ
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SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 1.815e0

ReadPosRankSum
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SIO_000300: 1.8e0

VQSLOD
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SIO_000300: 3.61e-1

MQRankSum
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SIO_000300: -1.54e-1

BaseQRankSum
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SIO_000300: -7.54e-1

DP
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SIO_000300: 4.350235e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.97e-1

QD
type: SiteQuality
SIO_000300: 1.089e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66740
num of homozygotes: 0

African
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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BaseQRankSum
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VQSLOD
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.491759065028469e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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VQSLOD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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DP
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SIO_000300: 4.350903e6

MQ
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SIO_000300: 5.926e1

BaseQRankSum
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SIO_000300: -2.586e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.904e1

FS
type: SiteQuality
SIO_000300: 1.108e0

ClippingRankSum
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SIO_000300: 1.19e-1

BaseQRankSum
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SIO_000300: 4.0e0

MQRankSum
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SIO_000300: 1.04e-1

VQSLOD
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ReadPosRankSum
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DP
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SIO_000300: 4.351118e6

InbreedingCoeff
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SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.362e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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BaseQRankSum
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DP
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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DP
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ClippingRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Latino
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African
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BaseQRankSum
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MQRankSum
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 246

GenotypeQuality
all individuals: 445
bin: 5.75e1
variant carriers: 263

GenotypeQuality
all individuals: 425
bin: 8.75e1
variant carriers: 300

GenotypeQuality
all individuals: 649
bin: 6.75e1
variant carriers: 248

GenotypeQuality
all individuals: 433
bin: 4.25e1
variant carriers: 249

GenotypeQuality
all individuals: 453
bin: 1.25e1
variant carriers: 199

GenotypeQuality
all individuals: 470
bin: 3.25e1
variant carriers: 256

GenotypeQuality
all individuals: 441
bin: 2.25e1
variant carriers: 218

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 282

GenotypeQuality
all individuals: 477
bin: 4.75e1
variant carriers: 264

GenotypeQuality
all individuals: 454
bin: 7.25e1
variant carriers: 257

GenotypeQuality
all individuals: 516
bin: 8.25e1
variant carriers: 299

GenotypeQuality
all individuals: 23334
bin: 9.75e1
variant carriers: 22678

Other
type: Population
allele count: 209
allele frequency: 4.300411522633745e-1
allele num: 486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1601
allele frequency: 4.37192790824686e-1
allele num: 3662
num of homozygotes: 0

South Asian
type: Population
allele count: 3321
allele frequency: 3.850881261595547e-1
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15144
allele frequency: 4.270245883149109e-1
allele num: 35464
num of homozygotes: 0

East Asian
type: Population
allele count: 1907
allele frequency: 4.722634967805844e-1
allele num: 4038
num of homozygotes: 0

African
type: Population
allele count: 1935
allele frequency: 4.365974729241877e-1
allele num: 4432
num of homozygotes: 0

Latino
type: Population
allele count: 2355
allele frequency: 4.694976076555024e-1
allele num: 5016
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.017123e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.466e0

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

MQ
type: SiteQuality
SIO_000300: 5.919e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.044999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.841e2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e0

FS
type: SiteQuality
SIO_000300: 3.53482e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.206e0

QD
type: SiteQuality
SIO_000300: 3.15e0

GenotypeQuality
all individuals: 2613
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 21

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 22

GenotypeQuality
all individuals: 1872
bin: 8.75e1
variant carriers: 24

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 17

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 15

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 18

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 22

GenotypeQuality
all individuals: 4111
bin: 7.75e1
variant carriers: 14

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 19

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 19397
bin: 9.75e1
variant carriers: 4369

GenotypeQuality
all individuals: 2979
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 24

GenotypeQuality
all individuals: 2895
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 7050
bin: 6.75e1
variant carriers: 18

GenotypeQuality
all individuals: 14967
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 3485
bin: 8.25e1
variant carriers: 21

European (Finnish)
type: Population
allele count: 625
allele frequency: 1.099964801126364e-1
allele num: 5682
num of homozygotes: 0

Other
type: Population
allele count: 39
allele frequency: 4.6875e-2
allele num: 832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2223
allele frequency: 3.535530250015904e-2
allele num: 62876
num of homozygotes: 0

South Asian
type: Population
allele count: 321
allele frequency: 1.955409356725146e-2
allele num: 16416
num of homozygotes: 0

East Asian
type: Population
allele count: 340
allele frequency: 4.051477597712107e-2
allele num: 8392
num of homozygotes: 0

African
type: Population
allele count: 525
allele frequency: 5.567338282078473e-2
allele num: 9430
num of homozygotes: 0

Latino
type: Population
allele count: 569
allele frequency: 5.064079743681026e-2
allele num: 11236
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e0

VQSLOD
type: SiteQuality
SIO_000300: -1.877e2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.872e0

FS
type: SiteQuality
SIO_000300: 1.98981e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.823e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.31e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 3.449652e6

MQ
type: SiteQuality
SIO_000300: 5.916e1

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19397
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7050
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2613
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14967
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590431961320695e-5
allele num: 62876
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.877e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.31e-2

FS
type: SiteQuality
SIO_000300: 1.98981e2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.872e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e0

DP
type: SiteQuality
SIO_000300: 3.449652e6

MQ
type: SiteQuality
SIO_000300: 5.916e1

MQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.823e0

QD
type: SiteQuality
SIO_000300: 8.15e0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2061
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4569
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19764
bin: 9.75e1
variant carriers: 940

GenotypeQuality
all individuals: 7785
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 559
allele frequency: 8.381060901376353e-3
allele num: 66698
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.20918984280532e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 117
allele frequency: 1.125649413122956e-2
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.850994909763998e-3
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 221
allele frequency: 3.36890243902439e-2
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 16
allele frequency: 1.773835920177384e-2
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.909e1

FS
type: SiteQuality
SIO_000300: 9.453400000000001e1

VQSLOD
type: SiteQuality
SIO_000300: -5.068e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.296e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.051e0

QD
type: SiteQuality
SIO_000300: 1.272e1

MQRankSum
type: SiteQuality
SIO_000300: -9.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

DP
type: SiteQuality
SIO_000300: 2.994828e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19651
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16498
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7819
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 3.522e0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
SIO_000300: 2.915717e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.215e0

MQ
type: SiteQuality
SIO_000300: 5.906e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

GenotypeQuality
all individuals: 7818
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
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variant carriers: 2

GenotypeQuality
all individuals: 3859
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 3204
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 2960
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GenotypeQuality
all individuals: 4597
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variant carriers: 0

GenotypeQuality
all individuals: 19502
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16502
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312673450508788e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.540832049306626e-4
allele num: 6490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.199112656634091e-4
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.811e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 6.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 1.1119e2

DP
type: SiteQuality
SIO_000300: 2.912556e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: -5.832e1

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 19502
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2960
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 1

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7818
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variant carriers: 0

GenotypeQuality
all individuals: 3859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16502
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49667246237784e-5
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.832e1

MQ
type: SiteQuality
SIO_000300: 5.952e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.811e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.49e-1

FS
type: SiteQuality
SIO_000300: 1.1119e2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 6.97e0

DP
type: SiteQuality
SIO_000300: 2.912556e6

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 2035
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GenotypeQuality
all individuals: 198
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variant carriers: 0

GenotypeQuality
all individuals: 16519
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GenotypeQuality
all individuals: 7793
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GenotypeQuality
all individuals: 190
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GenotypeQuality
all individuals: 3177
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GenotypeQuality
all individuals: 2900
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 219
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GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3828
bin: 8.25e1
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GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17259
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4564
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529660109523664e-5
allele num: 65374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Other
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
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VQSLOD
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 15902
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European (Non-Finnish)
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allele frequency: 8.015903552648455e-5
allele num: 62376
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East Asian
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allele num: 7922
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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DP
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FS
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 2.524614996213078e-4
allele num: 7922
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South Asian
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allele num: 15902
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.698327037236913e-4
allele num: 11118
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European (Non-Finnish)
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allele frequency: 1.282544568423753e-4
allele num: 62376
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DP
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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MQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.603180710529691e-5
allele num: 62376
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9790
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11118
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.947e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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South Asian
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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African
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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QD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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South Asian
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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African
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South Asian
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European (Finnish)
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Other
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InbreedingCoeff
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ClippingRankSum
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DP
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MQ
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
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Latino
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Other
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allele frequency: 0.0e0
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African
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South Asian
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East Asian
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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QD
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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African
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Other
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European (Finnish)
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FS
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DP
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

East Asian
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allele num: 8654
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African
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

Latino
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allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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QD
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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allele num: 66724
num of homozygotes: 0

South Asian
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East Asian
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MQ
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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African
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MQ
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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Other
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FS
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MQRankSum
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QD
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ReadPosRankSum
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DP
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SIO_000300: 2.468115e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.272e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 20
allele frequency: 2.996703626011388e-4
allele num: 66740
num of homozygotes: 0

African
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allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
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MQ
type: SiteQuality
SIO_000300: 5.928e1

VQSLOD
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DP
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QD
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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SIO_000300: -5.52e-1

ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
allele num: 10406
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

South Asian
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InbreedingCoeff
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ReadPosRankSum
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MQ
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MQRankSum
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VQSLOD
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SIO_000300: 7.8e-1

BaseQRankSum
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FS
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SIO_000300: 1.153e0

QD
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SIO_000300: 1.371e1

ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 2.466798e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.993407252022775e-5
allele num: 66740
num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.18e1

MQ
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MQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
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SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.79e-1

BaseQRankSum
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DP
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SIO_000300: 2.466514e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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FS
type: SiteQuality
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
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Other
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East Asian
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African
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South Asian
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MQ
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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DP
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QD
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
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Other
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European (Finnish)
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East Asian
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South Asian
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MQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13235
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
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MQ
type: SiteQuality
SIO_000300: 5.878e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.28e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

FS
type: SiteQuality
SIO_000300: 1.187e0

MQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

DP
type: SiteQuality
SIO_000300: 2.465826e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20502
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13233
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.371e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

QD
type: SiteQuality
SIO_000300: 1.1e1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.465539e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 5.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

DP
type: SiteQuality
SIO_000300: 2.465443e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

QD
type: SiteQuality
SIO_000300: 1.554e1

MQ
type: SiteQuality
SIO_000300: 5.82e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1989
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9230
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.254e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.16e-1

MQ
type: SiteQuality
SIO_000300: 5.846e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.991e0

DP
type: SiteQuality
SIO_000300: 2.465369e6

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4209
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9231
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5078
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 2.465209e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.97e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.609e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.855e0

ReadPosRankSum
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MQ
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SIO_000300: 5.832e1