17-56679748-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679748
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679748
    reference: chr 17
allele count: 1
allele frequency: 8.431845393682861e-6
allele num: 118598
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1545+13G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1527+13G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1527+13G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1365+13G>A
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-56679773-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679773
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679773
    reference: chr 17
allele count: 2
allele frequency: 1.655793621882969e-5
allele num: 120788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1515G>C
  hgvsp: ENSP00000374584.3:p.Lys505Asn
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1515G>C
  hgvsp: ENSP00000268910.8:p.Lys505Asn
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1533G>C
  hgvsp: ENSP00000240361.8:p.Lys511Asn
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1353G>C
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys511Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
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site quality: MQRankSum
site quality: QD
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site quality: DP
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site quality: VQSLOD

17-56679781-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679781
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679781
    reference: chr 17
allele count: 1
allele frequency: 8.260093834665961e-6
allele num: 121064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1507A>G
  hgvsp: ENSP00000268910.8:p.Ile503Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1345A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1525A>G
  hgvsp: ENSP00000240361.8:p.Ile509Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1507A>G
  hgvsp: ENSP00000374584.3:p.Ile503Val
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ile509Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
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site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-56679785-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679785
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679785
    reference: chr 17
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1521G>T
  hgvsp: ENST00000240361.8:c.1521G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1341G>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1503G>T
  hgvsp: ENST00000389934.3:c.1503G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1503G>T
  hgvsp: ENST00000349033.5:c.1503G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
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genotype quality: GenotypeQuality
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hgvs: p.Arg507Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
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site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-56679786-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679786
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679786
    reference: chr 17
allele count: 1
allele frequency: 8.25218682950982e-6
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg507Leu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
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site quality: DP
site quality: BaseQRankSum
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site quality: QD

17-56679786-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679786
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679786
    reference: chr 17
allele count: 2
allele frequency: 1.650437365901964e-5
allele num: 121180
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1340G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1502G>A
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Arg507Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
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17-56679787-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679787
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679787
    reference: chr 17
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  ensembl transcript: ENST00000582740
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
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filter: PASS
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hgvs: p.Arg507Trp
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population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
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site quality: DP
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17-56679788-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679788
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679788
    reference: chr 17
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
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population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
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reference allele: G
site quality: FS
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17-56679789-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679789
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679789
    reference: chr 17
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1499T>C
  hgvsp: ENSP00000374584.3:p.Ile500Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1499T>C
  hgvsp: ENSP00000268910.8:p.Ile500Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
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  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1337T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1517T>C
  hgvsp: ENSP00000240361.8:p.Ile506Thr
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile506Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

17-56679789-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679789
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679789
    reference: chr 17
allele count: 2
allele frequency: 1.649321304283287e-5
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1499T>A
  hgvsp: ENSP00000268910.8:p.Ile500Asn
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1337T>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1499T>A
  hgvsp: ENSP00000374584.3:p.Ile500Asn
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
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  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1517T>A
  hgvsp: ENSP00000240361.8:p.Ile506Asn
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ile506Asn
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
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site quality: FS
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17-56679796-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679796
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679796
    reference: chr 17
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1510C>G
  hgvsp: ENSP00000240361.8:p.Gln504Glu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1492C>G
  hgvsp: ENSP00000268910.8:p.Gln498Glu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
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  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1492C>G
  hgvsp: ENSP00000374584.3:p.Gln498Glu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1330C>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Gln504Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
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17-56679798-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679798
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679798
    reference: chr 17
allele count: 12
allele frequency: 9.889892529834509e-5
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1490T>C
  hgvsp: ENSP00000374584.3:p.Leu497Pro
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1508T>C
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1490T>C
  hgvsp: ENSP00000268910.8:p.Leu497Pro
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1328T>C
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Leu503Pro
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
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17-56679800-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679800
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679800
    reference: chr 17
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
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  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1488C>A
  hgvsp: ENSP00000268910.8:p.Asn496Lys
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1326C>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1506C>A
  hgvsp: ENSP00000240361.8:p.Asn502Lys
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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hgvs: p.Asn502Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
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17-56679803-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679803
    reference: chr 17
allele count: 2
allele frequency: 1.648043772042586e-5
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1323G>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  hgvsc: ENST00000240361.8:c.1503G>C
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
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genotype quality: GenotypeQuality
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hgvs: p.Met501Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
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17-56679810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679810
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679810
    reference: chr 17
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl transcript: ENST00000349033
  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
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hgvs: p.Arg499Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
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17-56679811-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679811
    reference: chr 17
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    type: ExactPosition
    position: 56679811
    reference: chr 17
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: stop_gained
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  consequence: 3_prime_UTR_variant
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
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consequence: stop gained
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hgvs: p.Arg499Ter
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: BaseQRankSum
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17-56679820-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679820
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679820
    reference: chr 17
allele count: 13
allele frequency: 1.070893124866138e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1486C>G
  hgvsp: ENSP00000240361.8:p.Gln496Glu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1468C>G
  hgvsp: ENSP00000268910.8:p.Gln490Glu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1306C>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1468C>G
  hgvsp: ENSP00000374584.3:p.Gln490Glu
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 189
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 469
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 787
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 15089
  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 54
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genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30598
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 10599
  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln496Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

17-56679826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679826
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679826
    reference: chr 17
allele count: 130
allele frequency: 1.070893124866138e-3
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1462G>A
  hgvsp: ENSP00000374584.3:p.Val488Ile
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1300G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1480G>A
  hgvsp: ENSP00000240361.8:p.Val494Ile
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1462G>A
  hgvsp: ENSP00000268910.8:p.Val488Ile
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
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  variant carriers: 8
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1620
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  variant carriers: 0
hgvs: p.Val494Ile
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

17-56679827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679827
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679827
    reference: chr 17
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1299C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1461C>T
  hgvsp: ENST00000349033.5:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1479C>T
  hgvsp: ENST00000240361.8:c.1479C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1461C>T
  hgvsp: ENST00000389934.3:c.1461C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 346
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  variant carriers: 0
hgvs: p.His493His
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

17-56679827-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679827
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679827
    reference: chr 17
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1461C>G
  hgvsp: ENSP00000268910.8:p.His487Gln
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1461C>G
  hgvsp: ENSP00000374584.3:p.His487Gln
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1479C>G
  hgvsp: ENSP00000240361.8:p.His493Gln
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1299C>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
hgvs: p.His493Gln
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

17-56679836-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679836
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679836
    reference: chr 17
allele count: 10
allele frequency: 8.237232289950576e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1452A>G
  hgvsp: ENST00000389934.3:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1290A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1470A>G
  hgvsp: ENST00000240361.8:c.1470A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1452A>G
  hgvsp: ENST00000349033.5:c.1452A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30664
  bin: 2.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15103
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 449
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45355
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser490Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

17-56679859-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679859
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679859
    reference: chr 17
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1447C>G
  hgvsp: ENSP00000240361.8:p.Pro483Ala
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1267C>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1429C>G
  hgvsp: ENSP00000268910.8:p.Pro477Ala
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1429C>G
  hgvsp: ENSP00000374584.3:p.Pro477Ala
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
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genotype depth: GenotypeDepth
  all individuals: 185
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genotype depth: GenotypeDepth
  all individuals: 1794
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 769
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 843
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
hgvs: p.Pro483Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum

17-56679859-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679859
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679859
    reference: chr 17
allele count: 5
allele frequency: 4.119159032491926e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1429C>A
  hgvsp: ENSP00000374584.3:p.Pro477Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1267C>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1429C>A
  hgvsp: ENSP00000268910.8:p.Pro477Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1447C>A
  hgvsp: ENSP00000240361.8:p.Pro483Thr
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro483Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

17-56679863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679863
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679863
    reference: chr 17
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1443G>A
  hgvsp: ENST00000240361.8:c.1443G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1263G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1425G>A
  hgvsp: ENST00000389934.3:c.1425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1425G>A
  hgvsp: ENST00000349033.5:c.1425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro481Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

17-56679864-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679864
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679864
    reference: chr 17
allele count: 9
allele frequency: 7.41485277397881e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1262C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1424C>T
  hgvsp: ENSP00000268910.8:p.Pro475Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1424C>T
  hgvsp: ENSP00000374584.3:p.Pro475Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1442C>T
  hgvsp: ENSP00000240361.8:p.Pro481Leu
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 768
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 92
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 113
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 11
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 5
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro481Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

17-56679896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679896
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679896
    reference: chr 17
allele count: 15
allele frequency: 1.236766597407737e-4
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1392G>A
  hgvsp: ENST00000349033.5:c.1392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1230G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1410G>A
  hgvsp: ENST00000240361.8:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1392G>A
  hgvsp: ENST00000389934.3:c.1392G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 446
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  variant carriers: 0
hgvs: p.Ser470Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

17-56679897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679897
    reference: chr 17
allele count: 86
allele frequency: 7.091262904449355e-4
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1391C>T
  hgvsp: ENSP00000268910.8:p.Ser464Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1229C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1409C>T
  hgvsp: ENSP00000240361.8:p.Ser470Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1391C>T
  hgvsp: ENSP00000374584.3:p.Ser464Leu
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
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  variant carriers: 8
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ser470Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

17-56679899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679899
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679899
    reference: chr 17
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1389C>T
  hgvsp: ENST00000349033.5:c.1389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1389C>T
  hgvsp: ENST00000389934.3:c.1389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1227C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1407C>T
  hgvsp: ENST00000240361.8:c.1407C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val469Val
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/17-56679904-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679904
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679904
    reference: chr 17
allele count: 113
allele frequency: 9.320817592424567e-4
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1384G>T
  hgvsp: ENSP00000268910.8:p.Val462Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1384G>T
  hgvsp: ENSP00000374584.3:p.Val462Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1402G>T
  hgvsp: ENSP00000240361.8:p.Val468Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1222G>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 442
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 98
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 189
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28
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genotype quality: GenotypeQuality
  all individuals: 1
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hgvs: p.Val468Leu
num of homozygotes: 2
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

17-56679904-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679904
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679904
    reference: chr 17
allele count: 8
allele frequency: 6.598808914990844e-5
allele num: 121234
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1402G>A
  hgvsp: ENSP00000240361.8:p.Val468Ile
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1384G>A
  hgvsp: ENSP00000268910.8:p.Val462Ile
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1222G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1384G>A
  hgvsp: ENSP00000374584.3:p.Val462Ile
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 328
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  variant carriers: 0
hgvs: p.Val468Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
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site quality: ReadPosRankSum
site quality: DP
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17-56679905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679905
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679905
    reference: chr 17
allele count: 3
allele frequency: 2.474879968321537e-5
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1221C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1383C>T
  hgvsp: ENST00000389934.3:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1383C>T
  hgvsp: ENST00000349033.5:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1401C>T
  hgvsp: ENST00000240361.8:c.1401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala467Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
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site quality: VQSLOD
site quality: QD

17-56679906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679906
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679906
    reference: chr 17
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1220C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1382C>T
  hgvsp: ENSP00000374584.3:p.Ala461Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1382C>T
  hgvsp: ENSP00000268910.8:p.Ala461Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1400C>T
  hgvsp: ENSP00000240361.8:p.Ala467Val
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala467Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

17-56679908-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679908
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679908
    reference: chr 17
allele count: 8
allele frequency: 6.601749463607856e-5
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1218A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1380A>G
  hgvsp: ENST00000349033.5:c.1380A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1398A>G
  hgvsp: ENST00000240361.8:c.1398A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1380A>G
  hgvsp: ENST00000389934.3:c.1380A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
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genotype depth: GenotypeDepth
  all individuals: 10560
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genotype depth: GenotypeDepth
  all individuals: 176
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genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14997
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 61
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 430
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genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 325
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys466Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

17-56679917-AACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679917
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679914
    reference: chr 17
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1368_1370delAGT
  hgvsp: ENSP00000268910.8:p.Val458del
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1386_1388delAGT
  hgvsp: ENSP00000240361.8:p.Val464del
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1206_*1208delAGT
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1368_1370delAGT
  hgvsp: ENSP00000374584.3:p.Val458del
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 14910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6
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genotype quality: GenotypeQuality
  all individuals: 7906
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  variant carriers: 0
hgvs: p.Val464del
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: AACT
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

17-56679925-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679925
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679925
    reference: chr 17
allele count: 4
allele frequency: 3.313068398297083e-5
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1381G>A
  hgvsp: ENSP00000240361.8:p.Gly461Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1363G>A
  hgvsp: ENSP00000268910.8:p.Gly455Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1363G>A
  hgvsp: ENSP00000374584.3:p.Gly455Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1201G>A
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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hgvs: p.Gly461Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

17-56679933-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679933
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679933
    reference: chr 17
allele count: 132
allele frequency: 1.09765832889835e-3
allele num: 120256
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1373G>A
  hgvsp: ENSP00000240361.8:p.Gly458Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1355G>A
  hgvsp: ENSP00000374584.3:p.Gly452Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1355G>A
  hgvsp: ENSP00000268910.8:p.Gly452Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1193G>A
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14312
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 125
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  variant carriers: 0
hgvs: p.Gly458Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

17-56679938-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679938
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679938
    reference: chr 17
allele count: 1
allele frequency: 8.349196807267141e-6
allele num: 119772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1350G>A
  hgvsp: ENSP00000268910.8:p.Trp450Ter
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1188G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1368G>A
  hgvsp: ENSP00000240361.8:p.Trp456Ter
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1350G>A
  hgvsp: ENSP00000374584.3:p.Trp450Ter
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 776
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 166
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genotype depth: GenotypeDepth
  all individuals: 1693
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
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genotype depth: GenotypeDepth
  all individuals: 421
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
  all individuals: 1166
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Trp456Ter
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
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17-56679940-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679940
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679939
    reference: chr 17
allele count: 2
allele frequency: 1.674396798553321e-5
allele num: 119446
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1365delC
  hgvsp: ENSP00000240361.8:p.Trp456GlyfsTer4
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1347delC
  hgvsp: ENSP00000374584.3:p.Trp450GlyfsTer4
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1347delC
  hgvsp: ENSP00000268910.8:p.Trp450GlyfsTer4
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1185delC
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 930
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Trp456GlyfsTer4
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: AG
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
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17-56679942-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679942
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679942
    reference: chr 17
allele count: 1
allele frequency: 8.383775717232013e-6
allele num: 119278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1346C>T
  hgvsp: ENSP00000268910.8:p.Pro449Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1346C>T
  hgvsp: ENSP00000374584.3:p.Pro449Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  ensembl gene: ENSG00000121101
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1184C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1364C>T
  hgvsp: ENSP00000240361.8:p.Pro455Leu
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1676
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro455Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
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site quality: VQSLOD

17-56679953-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679953
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679953
    reference: chr 17
allele count: 1
allele frequency: 8.539272112445135e-6
allele num: 117106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1337-2A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1337-2A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
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  ensembl gene: ENSG00000121101
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  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1175-2A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000121101
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  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1355-2A>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: c.1355-2A>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
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site quality: DP
site quality: MQ
site quality: ReadPosRankSum

17-56679955-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679955
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679955
    reference: chr 17
allele count: 1
allele frequency: 8.571330613364419e-6
allele num: 116668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1337-4A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1355-4A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1175-4A>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: splice region
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.1355-4A>G
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
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17-56679968-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 17
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    position: 56679968
    reference: chr 17
allele count: 1
allele frequency: 8.813523470413002e-6
allele num: 113462
alternate allele: G
annotation: Annotation
  canonical: false
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
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  hgvsc: ENST00000349033.5:c.1337-17T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
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population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
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17-56679971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679971
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679971
    reference: chr 17
allele count: 1
allele frequency: 8.88509791377901e-6
allele num: 112548
alternate allele: T
annotation: Annotation
  canonical: true
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
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population: Other
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population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
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17-56679972-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679972
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679972
    reference: chr 17
allele count: 1
allele frequency: 8.894106764857605e-6
allele num: 112434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
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num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
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site quality: InbreedingCoeff
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17-56679988-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56679988
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56679988
    reference: chr 17
allele count: 1
allele frequency: 9.169432778888298e-6
allele num: 109058
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1337-37T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1175-37T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
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population: African
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population: East Asian
population: South Asian
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17-56679992-C-T
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location: Region
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17-56680000-G-A
type: Variant
location: Region
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    type: ExactPosition
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allele count: 0
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17-56680000-G-T
type: Variant
location: Region
  begin: Position
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17-56680003-G-A
type: Variant
location: Region
  begin: Position
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    position: 56680003
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allele count: 12
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

17-56682293-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682293
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682293
    reference: chr 17
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+46T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+46T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+46T>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+46T>C
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

17-56682296-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682296
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682296
    reference: chr 17
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+43A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+43A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+43A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+43A>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
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site quality: InbreedingCoeff
site quality: ClippingRankSum
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site quality: FS
site quality: VQSLOD
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17-56682302-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682302
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682302
    reference: chr 17
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+37A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+37A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+37A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
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  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+37A>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
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site quality: DP
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site quality: QD

http://identifiers.org/exac.variant/17-56682307-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682307
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682307
    reference: chr 17
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+32T>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+32T>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+32T>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+32T>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 478
  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8562
  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

17-56682309-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682309
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682309
    reference: chr 17
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+30A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+30A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+30A>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+30A>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12104
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/17-56682318-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682318
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682318
    reference: chr 17
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+21G>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+21G>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+21G>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+21G>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2364
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num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

17-56682318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682318
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682318
    reference: chr 17
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1336+21G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1174+21G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1336+21G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1354+21G>A
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/17-56682349-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682349
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682349
    reference: chr 17
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1326G>T
  hgvsp: ENSP00000268910.8:p.Glu442Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1326G>T
  hgvsp: ENSP00000374584.3:p.Glu442Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1344G>T
  hgvsp: ENSP00000240361.8:p.Glu448Asp
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1164G>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1145
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu448Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
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17-56682353-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682353
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682353
    reference: chr 17
allele count: 7
allele frequency: 5.76710771309463e-5
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1160A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1322A>G
  hgvsp: ENSP00000268910.8:p.Gln441Arg
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
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  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1340A>G
  hgvsp: ENSP00000240361.8:p.Gln447Arg
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
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  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1322A>G
  hgvsp: ENSP00000374584.3:p.Gln441Arg
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2106
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gln447Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
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site quality: MQ
site quality: InbreedingCoeff
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17-56682363-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682363
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682363
    reference: chr 17
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1312A>G
  hgvsp: ENSP00000268910.8:p.Met438Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1150A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1312A>G
  hgvsp: ENSP00000374584.3:p.Met438Val
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1330A>G
  hgvsp: ENSP00000240361.8:p.Met444Val
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Met444Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
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17-56682372-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682372
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682372
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1303A>G
  hgvsp: ENSP00000374584.3:p.Ser435Gly
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1141A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1321A>G
  hgvsp: ENSP00000240361.8:p.Ser441Gly
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1303A>G
  hgvsp: ENSP00000268910.8:p.Ser435Gly
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12226
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genotype depth: GenotypeDepth
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hgvs: p.Ser441Gly
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
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17-56682375-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682375
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682375
    reference: chr 17
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1318T>C
  hgvsp: ENSP00000240361.8:p.Tyr440His
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000268910
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  gene symbol: TEX14
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  hgvsp: ENSP00000268910.8:p.Tyr434His
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr440His
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
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site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

17-56682386-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682386
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682386
    reference: chr 17
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1307A>C
  hgvsp: ENSP00000240361.8:p.Lys436Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
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  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1289A>C
  hgvsp: ENSP00000268910.8:p.Lys430Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
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  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1127A>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
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  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1289A>C
  hgvsp: ENSP00000374584.3:p.Lys430Thr
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 478
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hgvs: p.Lys436Thr
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
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site quality: FS

17-56682391-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682391
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682391
    reference: chr 17
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1284A>G
  hgvsp: ENST00000349033.5:c.1284A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1122A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1302A>G
  hgvsp: ENST00000240361.8:c.1302A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1284A>G
  hgvsp: ENST00000389934.3:c.1284A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr434Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
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17-56682395-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682395
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682395
    reference: chr 17
allele count: 14
allele frequency: 1.153250518962734e-4
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1298C>G
  hgvsp: ENSP00000240361.8:p.Ala433Gly
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1118C>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
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  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1280C>G
  hgvsp: ENSP00000268910.8:p.Ala427Gly
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1280C>G
  hgvsp: ENSP00000374584.3:p.Ala427Gly
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala433Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
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17-56682401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682401
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682401
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1274A>G
  hgvsp: ENSP00000268910.8:p.Lys425Arg
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1112A>G
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
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  hgvsp: ENSP00000374584.3:p.Lys425Arg
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl transcript: ENST00000240361
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  hgvsp: ENSP00000240361.8:p.Lys431Arg
  variant of: http://identifiers.org/hgnc/11737
canonical: true
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filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys431Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: T
site quality: FS
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17-56682404-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682404
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682404
    reference: chr 17
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
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genotype quality: GenotypeQuality
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hgvs: p.Gln430Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
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site quality: QD
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17-56682405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682405
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682405
    reference: chr 17
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1108C>T
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: true
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  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: stop gained
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genotype depth: GenotypeDepth
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hgvs: p.Gln430Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
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17-56682405-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682405
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682405
    reference: chr 17
allele count: 5
allele frequency: 4.119091163725636e-5
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  consequence: 3_prime_UTR_variant
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
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  gene symbol: TEX14
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  variant of: http://identifiers.org/hgnc/11737
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consequence: missense
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hgvs: p.Gln430Glu
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population: African
population: Other
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population: European (Finnish)
population: Latino
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site quality: MQ
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17-56682410-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682410
    reference: chr 17
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    type: ExactPosition
    position: 56682410
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allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
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annotation: Annotation
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annotation: Annotation
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 249
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 4
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 15
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile428Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

17-56682414-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682414
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682414
    reference: chr 17
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1279G>C
  hgvsp: ENSP00000240361.8:p.Val427Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1099G>C
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1261G>C
  hgvsp: ENSP00000374584.3:p.Val421Leu
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1261G>C
  hgvsp: ENSP00000268910.8:p.Val421Leu
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
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genotype depth: GenotypeDepth
  all individuals: 16
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 888
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 249
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 438
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8660
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 478
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
hgvs: p.Val427Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

17-56682421-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682421
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682421
    reference: chr 17
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1272A>G
  hgvsp: ENST00000240361.8:c.1272A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1254A>G
  hgvsp: ENST00000389934.3:c.1254A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1254A>G
  hgvsp: ENST00000349033.5:c.1254A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1092A>G
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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genotype depth: GenotypeDepth
  all individuals: 523
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 175
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 249
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2361
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hgvs: p.Ala424Ala
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/17-56682423-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682423
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682423
    reference: chr 17
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1270G>T
  hgvsp: ENSP00000240361.8:p.Ala424Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1252G>T
  hgvsp: ENSP00000268910.8:p.Ala418Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1252G>T
  hgvsp: ENSP00000374584.3:p.Ala418Ser
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1090G>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 389
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala424Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

17-56682423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682423
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682423
    reference: chr 17
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1270G>A
  hgvsp: ENSP00000240361.8:p.Ala424Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1252G>A
  hgvsp: ENSP00000268910.8:p.Ala418Thr
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1090G>A
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1252G>A
  hgvsp: ENSP00000374584.3:p.Ala418Thr
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala424Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

17-56682424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682424
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682424
    reference: chr 17
allele count: 6
allele frequency: 4.944131316127757e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1269C>T
  hgvsp: ENST00000240361.8:c.1269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1251C>T
  hgvsp: ENST00000349033.5:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1251C>T
  hgvsp: ENST00000389934.3:c.1251C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1089C>T
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42641
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala423Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

17-56682429-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 56682429
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 56682430
    reference: chr 17
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: AG
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000240361
  ensembl transcript: ENST00000240361
  gene symbol: TEX14
  hgvsc: ENST00000240361.8:c.1263dupC
  hgvsp: ENSP00000240361.8:p.Trp422LeufsTer32
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000463593
  ensembl transcript: ENST00000582740
  gene symbol: TEX14
  hgvsc: ENST00000582740.1:c.*1083dupC
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000374584
  ensembl transcript: ENST00000389934
  gene symbol: TEX14
  hgvsc: ENST00000389934.3:c.1245dupC
  hgvsp: ENSP00000374584.3:p.Trp416LeufsTer32
  variant of: http://identifiers.org/hgnc/11737
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000121101
  ensembl protein: ENSP00000268910
  ensembl transcript: ENST00000349033
  gene symbol: TEX14
  hgvsc: ENST00000349033.5:c.1245dupC
  hgvsp: ENSP00000268910.8:p.Trp416LeufsTer32
  variant of: http://identifiers.org/hgnc/11737
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp422LeufsTer32
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 7710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42651
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-5
allele num: 65940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.417e1

FS
type: SiteQuality
SIO_000300: 2.096e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.634e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

DP
type: SiteQuality
SIO_000300: 1.67234e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

GenotypeQuality
all individuals: 7893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.700398e6

FS
type: SiteQuality
SIO_000300: 8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

GenotypeQuality
all individuals: 2544
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 351
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

FS
type: SiteQuality
SIO_000300: 5.74e0

DP
type: SiteQuality
SIO_000300: 1.703651e6

QD
type: SiteQuality
SIO_000300: 1.003e1

MQ
type: SiteQuality
SIO_000300: 5.873e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

GenotypeQuality
all individuals: 7921
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.906e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.895e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

DP
type: SiteQuality
SIO_000300: 1.705439e6

QD
type: SiteQuality
SIO_000300: 1.012e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

GenotypeQuality
all individuals: 1646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

DP
type: SiteQuality
SIO_000300: 1.706293e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 5.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
all individuals: 1646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.0016509079994e-5
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

FS
type: SiteQuality
SIO_000300: 5.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.75e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

DP
type: SiteQuality
SIO_000300: 1.706293e6

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.706503e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 3.007e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 1631
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.211e0

VQSLOD
type: SiteQuality
SIO_000300: 6.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

QD
type: SiteQuality
SIO_000300: 1.105e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 1.706557e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

FS
type: SiteQuality
SIO_000300: 1.781e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

DP
type: SiteQuality
SIO_000300: 1.706956e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

GenotypeQuality
all individuals: 352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.706956e6

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

FS
type: SiteQuality
SIO_000300: 1.781e0

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

QD
type: SiteQuality
SIO_000300: 1.133e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.145e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.228e1

MQRankSum
type: SiteQuality
SIO_000300: -7.0e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.04e0

DP
type: SiteQuality
SIO_000300: 1.707553e6

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.799316259821268e-4
allele num: 66692
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 1.708642e6

GenotypeQuality
all individuals: 2533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7941
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-1

QD
type: SiteQuality
SIO_000300: 5.54e0

DP
type: SiteQuality
SIO_000300: 1.70757e6

MQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.336e0

VQSLOD
type: SiteQuality
SIO_000300: -1.361e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1631
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998320940273447e-5
allele num: 66704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 3.616e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.77e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.707963e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.436e1

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.18e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

FS
type: SiteQuality
SIO_000300: 1.102e0

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

DP
type: SiteQuality
SIO_000300: 1.708161e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.013e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

DP
type: SiteQuality
SIO_000300: 1.708082e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.22e1

VQSLOD
type: SiteQuality
SIO_000300: -5.266999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.897e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.056935190793458e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 1.708902e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 1.114e0

QD
type: SiteQuality
SIO_000300: 1.304e1

GenotypeQuality
all individuals: 347
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.20918984280532e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 111
allele frequency: 1.066692292907938e-2
allele num: 10406
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.716898e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: 6.18e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

FS
type: SiteQuality
SIO_000300: 4.494e0

QD
type: SiteQuality
SIO_000300: 1.346e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

DP
type: SiteQuality
SIO_000300: 1.70596e6

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

GenotypeQuality
all individuals: 2443
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 346
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 9.25e1
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GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

FS
type: SiteQuality
SIO_000300: 4.494e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

DP
type: SiteQuality
SIO_000300: 1.70596e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.346e1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498441620714457e-4
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.284e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.706547e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
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variant carriers: 0

GenotypeQuality
all individuals: 2435
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.123e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

QD
type: SiteQuality
SIO_000300: 1.119e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 1.70578e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

GenotypeQuality
all individuals: 2435
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994664748373947e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.119e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.70578e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 45332
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.855e0

MQRankSum
type: SiteQuality
SIO_000300: -8.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.309e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 6.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.023e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

DP
type: SiteQuality
SIO_000300: 1.705193e6

GenotypeQuality
all individuals: 1648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45339
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.63460140537921e-4
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

DP
type: SiteQuality
SIO_000300: 1.705684e6

MQRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e-1

GenotypeQuality
all individuals: 2426
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 7919
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.249617565013948e-4
allele num: 66678
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

FS
type: SiteQuality
SIO_000300: 5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 1.703749e6

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45250
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.053268765133172e-4
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 71
allele frequency: 6.841395259202158e-3
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049916006719462e-4
allele num: 66672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.474e0

FS
type: SiteQuality
SIO_000300: 1.227e0

QD
type: SiteQuality
SIO_000300: 1.343e1

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.705296e6

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 6.107e0

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 1.70108e6

QD
type: SiteQuality
SIO_000300: 1.468e1

GenotypeQuality
all individuals: 2418
bin: 9.75e1
variant carriers: 111

GenotypeQuality
all individuals: 1590
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45244
bin: 6.25e1
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GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 113
allele frequency: 1.308173188238018e-2
allele num: 8638
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.12e-2

QD
type: SiteQuality
SIO_000300: 1.337e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

DP
type: SiteQuality
SIO_000300: 1.703155e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001140216641162e-5
allele num: 66654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.858024691358024e-4
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.12e-2

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.703155e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

DP
type: SiteQuality
SIO_000300: 1.698344e6

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 1.317e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2299
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GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.697896e6

VQSLOD
type: SiteQuality
SIO_000300: 5.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.032e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e0

QD
type: SiteQuality
SIO_000300: 1.224e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 7913
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.922810661128419e-4
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.344e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.268e0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.697793e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

GenotypeQuality
all individuals: 1605
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 429
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.9961e1

MQRankSum
type: SiteQuality
SIO_000300: -3.123e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

VQSLOD
type: SiteQuality
SIO_000300: -9.994e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

QD
type: SiteQuality
SIO_000300: 1.379e1

DP
type: SiteQuality
SIO_000300: 1.694623e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44851
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variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.019925954910755e-5
allele num: 66446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.91e-1

FS
type: SiteQuality
SIO_000300: 1.004e0

QD
type: SiteQuality
SIO_000300: 9.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.198e0

MQRankSum
type: SiteQuality
SIO_000300: 6.45e-1

DP
type: SiteQuality
SIO_000300: 1.689225e6

VQSLOD
type: SiteQuality
SIO_000300: -4.769e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 773
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 78
allele frequency: 1.18217641709609e-2
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 53
allele frequency: 8.002415823644874e-4
allele num: 66230
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.681512e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.463e0

VQSLOD
type: SiteQuality
SIO_000300: 5.35e0

QD
type: SiteQuality
SIO_000300: 1.308e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
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variant carriers: 0

GenotypeQuality
all individuals: 43791
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.922603691208574e-5
allele num: 10078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.286e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e0

MQRankSum
type: SiteQuality
SIO_000300: -4.07e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.153e-1

FS
type: SiteQuality
SIO_000300: 1.536e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.667382e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.606e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.03573054855651e-5
allele num: 65882
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
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Other
type: Population
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allele frequency: 0.0e0
allele num: 894
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QD
type: SiteQuality
SIO_000300: 1.559e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

DP
type: SiteQuality
SIO_000300: 1.659667e6

MQ
type: SiteQuality
SIO_000300: 6.006e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

FS
type: SiteQuality
SIO_000300: 7.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519849230956289e-5
allele num: 65796
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16036
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10014
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.298e1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.656281e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

FS
type: SiteQuality
SIO_000300: 1.171e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.546838262591263e-5
allele num: 64648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 3.337e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15496
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64390
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Latino
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allele frequency: 8.832361773538245e-5
allele num: 11322
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.576037e6

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.63e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

QD
type: SiteQuality
SIO_000300: 1.538e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.594438598169585e-5
allele num: 62718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.4159e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.902e1

VQSLOD
type: SiteQuality
SIO_000300: -8.175e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

MQ
type: SiteQuality
SIO_000300: 5.848e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
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variant carriers: 1

GenotypeQuality
all individuals: 252
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.605084908991686e-5
allele num: 62302
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.689e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

FS
type: SiteQuality
SIO_000300: 3.132e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 1.369139e6

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -6.435999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607045286536175e-5
allele num: 62226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14712
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.323e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

QD
type: SiteQuality
SIO_000300: 1.323e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.342182e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 5.811e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.577287066246057e-4
allele num: 6340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60326
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.902e1

FS
type: SiteQuality
SIO_000300: 4.875e0

VQSLOD
type: SiteQuality
SIO_000300: -5.581e-1

DP
type: SiteQuality
SIO_000300: 1.148031e6

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 530
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.062265870203503e-5
allele num: 59262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13750
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.114375e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 8.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

QD
type: SiteQuality
SIO_000300: 9.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 3483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.064e1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.589e-1

DP
type: SiteQuality
SIO_000300: 1.079801e6

FS
type: SiteQuality
SIO_000300: 7.361e0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5475
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variant carriers: 0

GenotypeQuality
all individuals: 3483
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.803921568627451e-5
allele num: 10200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.361e0

VQSLOD
type: SiteQuality
SIO_000300: -1.589e-1

DP
type: SiteQuality
SIO_000300: 1.079801e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

QD
type: SiteQuality
SIO_000300: 1.064e1

GenotypeQuality
all individuals: 708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
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variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7316
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.506265664160401e-3
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 8.830455259026688e-4
allele num: 10192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56798
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.078914e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

FS
type: SiteQuality
SIO_000300: 2.066e0

QD
type: SiteQuality
SIO_000300: 1.209e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.408e0

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.294e0

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.58e-2

DP
type: SiteQuality
SIO_000300: 1.810959e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

QD
type: SiteQuality
SIO_000300: 2.999e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.65e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.49e0

VQSLOD
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 2358
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.211e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.81764e6

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.465e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
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African
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allele frequency: 9.613535858488752e-5
allele num: 10402
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

MQ
type: SiteQuality
SIO_000300: 5.991e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.820545e6

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 49
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.82172e6

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.398e1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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VQSLOD
type: SiteQuality
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FS
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.049223574554829e-4
allele num: 66716
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.830689e6

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.502e1

FS
type: SiteQuality
SIO_000300: 1.124e0

VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.949e0

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.830503e6

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.566e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16510
num of homozygotes: 0

Other
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African
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East Asian
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allele frequency: 1.15606936416185e-4
allele num: 8650
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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VQSLOD
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BaseQRankSum
type: SiteQuality
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MQ
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ClippingRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66736
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African
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East Asian
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Latino
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South Asian
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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Other
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African
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allele frequency: 1.345895020188425e-3
allele num: 10402
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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Latino
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African
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East Asian
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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Other
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African
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East Asian
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European (Non-Finnish)
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MQ
type: SiteQuality
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VQSLOD
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QD
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.408e0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 1.830004e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

QD
type: SiteQuality
SIO_000300: 1.4e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

GenotypeQuality
all individuals: 8664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.845414343395501e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

DP
type: SiteQuality
SIO_000300: 1.830004e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

GenotypeQuality
all individuals: 1146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8664
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.829555e6

MQRankSum
type: SiteQuality
SIO_000300: 8.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

FS
type: SiteQuality
SIO_000300: 1.84e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.471e0

DP
type: SiteQuality
SIO_000300: 1.829179e6

FS
type: SiteQuality
SIO_000300: 6.74e0

QD
type: SiteQuality
SIO_000300: 1.458e1

MQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.28e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

FS
type: SiteQuality
SIO_000300: 6.706e0

QD
type: SiteQuality
SIO_000300: 1.342e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.763e0

DP
type: SiteQuality
SIO_000300: 1.828679e6

GenotypeQuality
all individuals: 2357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.168e1

VQSLOD
type: SiteQuality
SIO_000300: 9.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

FS
type: SiteQuality
SIO_000300: 2.176e0

DP
type: SiteQuality
SIO_000300: 1.828731e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.26e-1

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2800
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8660
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 2.176e0

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.58e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.26e-1

DP
type: SiteQuality
SIO_000300: 1.828731e6

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.76923076923077e-4
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

QD
type: SiteQuality
SIO_000300: 1.335e1

FS
type: SiteQuality
SIO_000300: 3.912e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
SIO_000300: 1.828354e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1