19-47226177-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226177
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226177
    reference: chr 19
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1817C>A
  hgvsp: ENSP00000375777.1:p.Thr606Asn
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1065C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1439C>A
  hgvsp: ENSP00000440901.1:p.Thr480Asn
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.838C>A
  hgvsp: ENSP00000470634.2:p.Thr280Asn
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.129C>A
  hgvsp: ENSP00000472938.1:p.Thr44Asn
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1165C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1796C>A
  hgvsp: ENSP00000263280.4:p.Thr599Asn
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1064C>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr606Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

19-47226183-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226183
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226183
    reference: chr 19
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.123C>T
  hgvsp: ENSP00000472938.1:p.Ala42Val
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1790C>T
  hgvsp: ENSP00000263280.4:p.Ala597Val
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1811C>T
  hgvsp: ENSP00000375777.1:p.Ala604Val
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.445C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.832C>T
  hgvsp: ENSP00000470634.2:p.Ala278Val
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1059C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1433C>T
  hgvsp: ENSP00000440901.1:p.Ala478Val
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1058C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1159C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala604Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

19-47226191-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226191
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226191
    reference: chr 19
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1051C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.850C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.437C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1425C>A
  hgvsp: ENST00000539396.1:c.1425C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.824C>A
  hgvsp: ENST00000594287.2:c.824C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1050C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1803C>A
  hgvsp: ENST00000391910.3:c.1803C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1782C>A
  hgvsp: ENST00000263280.6:c.1782C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1151C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.115C>A
  hgvsp: ENST00000600615.1:c.115C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr601Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ

19-47226194-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226194
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226194
    reference: chr 19
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1047C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1148C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1779C>T
  hgvsp: ENST00000263280.6:c.1779C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1800C>T
  hgvsp: ENST00000391910.3:c.1800C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1422C>T
  hgvsp: ENST00000539396.1:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.434C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.847C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.112C>T
  hgvsp: ENST00000600615.1:c.112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.821C>T
  hgvsp: ENST00000594287.2:c.821C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1048C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3992
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro600Pro
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-47226202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226202
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226202
    reference: chr 19
allele count: 1
allele frequency: 8.323761008173934e-6
allele num: 120138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1414G>A
  hgvsp: ENSP00000440901.1:p.Gly472Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.426G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1039G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.839G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.104G>A
  hgvsp: ENSP00000472938.1:p.Gly36Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1040G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1792G>A
  hgvsp: ENSP00000375777.1:p.Gly598Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1140G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.813G>A
  hgvsp: ENSP00000470634.2:p.Gly272Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1771G>A
  hgvsp: ENSP00000263280.4:p.Gly591Arg
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly598Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-47226203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226203
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226203
    reference: chr 19
allele count: 3
allele frequency: 2.497502497502498e-5
allele num: 120120
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.812C>T
  hgvsp: ENST00000594287.2:c.812C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.103C>T
  hgvsp: ENST00000600615.1:c.103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1413C>T
  hgvsp: ENST00000539396.1:c.1413C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.425C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1791C>T
  hgvsp: ENST00000391910.3:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1770C>T
  hgvsp: ENST00000263280.6:c.1770C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1139C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1038C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1039C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.838C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23834
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His597His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

19-47226211-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226211
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226211
    reference: chr 19
allele count: 1
allele frequency: 8.34432002136146e-6
allele num: 119842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.417T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-4T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-4T>C
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1787-4T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

19-47226212-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226212
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226212
    reference: chr 19
allele count: 1
allele frequency: 8.344180768332166e-6
allele num: 119844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.416C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-5C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-5C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15240
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1787-5C>G
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

19-47226219-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226219
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226219
    reference: chr 19
allele count: 3
allele frequency: 2.510418235678064e-5
allele num: 119502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.409C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-12C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14950
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum

19-47226221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226221
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226221
    reference: chr 19
allele count: 1
allele frequency: 8.36946150884652e-6
allele num: 119482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.407C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-14C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-14C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4088
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

19-47226228-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226228
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226227
    reference: chr 19
allele count: 1
allele frequency: 8.39348665435622e-6
allele num: 119140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.399delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-22delC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-22delC
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22239
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4049
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: AG
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-47226236-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226236
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226236
    reference: chr 19
allele count: 16
allele frequency: 1.347777010293647e-4
allele num: 118714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.392C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-29C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-29C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20584
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-47226243-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226243
    reference: chr 19
allele count: 1
allele frequency: 8.466826971924002e-6
allele num: 118108
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.385G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-36G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-36G>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

19-47226243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226243
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226243
    reference: chr 19
allele count: 4
allele frequency: 3.386730788769601e-5
allele num: 118108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.385G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-36G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-36G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17665
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22091
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-47226244-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226244
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226244
    reference: chr 19
allele count: 1
allele frequency: 8.468978133098461e-6
allele num: 118078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.384G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-37G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-37G>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17700
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-47226251-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226251
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226251
    reference: chr 19
allele count: 17
allele frequency: 1.456402172609359e-4
allele num: 116726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.377G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-44G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-44G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9382
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12953
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9498
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4142
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13065
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-47226256-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226256
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226256
    reference: chr 19
allele count: 3
allele frequency: 2.5818000309816e-5
allele num: 116198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.372G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-49G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-49G>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8733
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4850
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-47226257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226257
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226257
    reference: chr 19
allele count: 1
allele frequency: 8.601706578585191e-6
allele num: 116256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.99-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.371G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1766-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1787-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1034-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1409-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.834-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1135-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.808-50G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1035-50G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4755
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

19-47226329-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226329
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226329
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 28288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.299A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+42A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+42A>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25880
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18815
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

19-47226344-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226344
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226344
    reference: chr 19
allele count: 3
allele frequency: 1.308101508677073e-4
allele num: 22934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.284C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+27C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+27C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25257
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

19-47226345-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226345
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226345
    reference: chr 19
allele count: 1
allele frequency: 4.424387222369702e-5
allele num: 22602
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.283C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+26C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+26C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6715
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22046
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21559
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

19-47226351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226351
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226351
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+20C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.277C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+20C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25058
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

19-47226355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226355
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226355
    reference: chr 19
allele count: 10
allele frequency: 4.984051036682615e-4
allele num: 20064
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.273G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+16G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+16G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22979
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25199
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

19-47226356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226356
    reference: chr 19
allele count: 2
allele frequency: 9.957184108334163e-5
allele num: 20086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.272C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+15C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+15C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22987
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25282
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5062
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

19-47226360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226360
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226360
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 19816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+11G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.268G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+11G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25172
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

19-47226364-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226364
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226364
    reference: chr 19
allele count: 1
allele frequency: 4.978592054167082e-5
allele num: 20086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.264G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033+7G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807+7G>C
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22228
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1786+7G>C
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

19-47226371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226371
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226371
    reference: chr 19
allele count: 1
allele frequency: 4.956383822363204e-5
allele num: 20176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.257G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.807G>A
  hgvsp: ENSP00000470634.2:p.Glu270Lys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1408G>A
  hgvsp: ENSP00000440901.1:p.Glu470Lys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1034G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1134G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.833G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1786G>A
  hgvsp: ENSP00000375777.1:p.Glu596Lys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1765G>A
  hgvsp: ENSP00000263280.4:p.Glu589Lys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.98G>A
  hgvsp: ENSP00000472938.1:p.Glu34Lys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1033G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22540
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu596Lys
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD

19-47226402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226402
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226402
    reference: chr 19
allele count: 4
allele frequency: 1.958672020370189e-4
allele num: 20422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.1003G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.226G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1755G>A
  hgvsp: ENST00000391910.3:c.1755G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1734G>A
  hgvsp: ENST00000263280.6:c.1734G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1377G>A
  hgvsp: ENST00000539396.1:c.1377G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.776G>A
  hgvsp: ENST00000594287.2:c.776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.67G>A
  hgvsp: ENST00000600615.1:c.67G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1103G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.802G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.1002G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25866
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro585Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

19-47226404-GGCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226404
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226401
    reference: chr 19
allele count: 19
allele frequency: 9.500950095009501e-4
allele num: 19998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1372_1374delAGC
  hgvsp: ENSP00000440901.1:p.Ser458del
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.997_999delAGC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1750_1752delAGC
  hgvsp: ENSP00000375777.1:p.Ser584del
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.771_773delAGC
  hgvsp: ENSP00000470634.2:p.Ser258del
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.62_64delAGC
  hgvsp: ENSP00000472938.1:p.Ser22del
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1729_1731delAGC
  hgvsp: ENSP00000263280.4:p.Ser577del
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.221_223delAGC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.797_799delAGC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1098_1100delAGC
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.998_1000delAGC
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25521
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 2
hgvs: p.Ser584del
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: GGCT
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

19-47226413-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226413
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226413
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.791A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1723A>T
  hgvsp: ENSP00000263280.4:p.Ser575Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.215A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1092A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.991A>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.56A>T
  hgvsp: ENSP00000472938.1:p.Ser20Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1744A>T
  hgvsp: ENSP00000375777.1:p.Ser582Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.765A>T
  hgvsp: ENSP00000470634.2:p.Ser256Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1366A>T
  hgvsp: ENSP00000440901.1:p.Ser456Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.992A>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25250
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6062
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser582Cys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

19-47226431-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226431
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226431
    reference: chr 19
allele count: 5
allele frequency: 2.490287877278613e-4
allele num: 20078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.773C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1348C>T
  hgvsp: ENSP00000440901.1:p.Arg450Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1705C>T
  hgvsp: ENSP00000263280.4:p.Arg569Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.197C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.38C>T
  hgvsp: ENSP00000472938.1:p.Arg14Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.974C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1726C>T
  hgvsp: ENSP00000375777.1:p.Arg576Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.747C>T
  hgvsp: ENSP00000470634.2:p.Arg250Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.973C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1074C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26065
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21937
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg576Cys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

19-47226434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226434
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226434
    reference: chr 19
allele count: 723
allele frequency: 3.55247641509434e-2
allele num: 20352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.770G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1723G>A
  hgvsp: ENSP00000375777.1:p.Val575Ile
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.970G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.35G>A
  hgvsp: ENSP00000472938.1:p.Val13Ile
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.194G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1702G>A
  hgvsp: ENSP00000263280.4:p.Val568Ile
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.744G>A
  hgvsp: ENSP00000470634.2:p.Val249Ile
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1345G>A
  hgvsp: ENSP00000440901.1:p.Val449Ile
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1071G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.971G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 21304
  bin: 7.5e0
  variant carriers: 635
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4360
  bin: 2.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 26258
  bin: 2.5e0
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 2.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 1.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6151
  bin: 6.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.25e1
  variant carriers: 24
hgvs: p.Val575Ile
num of homozygotes: 54
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-47226435-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226435
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226435
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 20078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.969C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.769C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.34C>T
  hgvsp: ENST00000600615.1:c.34C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1070C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1701C>T
  hgvsp: ENST00000263280.6:c.1701C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.970C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.193C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1344C>T
  hgvsp: ENST00000539396.1:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.743C>T
  hgvsp: ENST00000594287.2:c.743C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1722C>T
  hgvsp: ENST00000391910.3:c.1722C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20592
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16689
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr574Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-47226444-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226444
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226444
    reference: chr 19
allele count: 2
allele frequency: 1.017190519784356e-4
allele num: 19662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.760T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.961T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1061T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.25T>G
  hgvsp: ENST00000600615.1:c.25T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.734T>G
  hgvsp: ENST00000594287.2:c.734T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1692T>G
  hgvsp: ENST00000263280.6:c.1692T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1713T>G
  hgvsp: ENST00000391910.3:c.1713T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.960T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.184T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1335T>G
  hgvsp: ENST00000539396.1:c.1335T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala571Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

19-47226450-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226450
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226450
    reference: chr 19
allele count: 757
allele frequency: 3.929201702481055e-2
allele num: 19266
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1707T>C
  hgvsp: ENST00000391910.3:c.1707T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1686T>C
  hgvsp: ENST00000263280.6:c.1686T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.19T>C
  hgvsp: ENST00000600615.1:c.19T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.754T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1055T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.955T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1329T>C
  hgvsp: ENST00000539396.1:c.1329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.728T>C
  hgvsp: ENST00000594287.2:c.728T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.954T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.178T>C
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 1.25e1
  variant carriers: 173
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 30250
  bin: 2.5e0
  variant carriers: 305
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 2.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 16765
  bin: 7.5e0
  variant carriers: 602
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 55
hgvs: p.Cys569Cys
num of homozygotes: 63
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

19-47226459-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226459
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226459
    reference: chr 19
allele count: 1
allele frequency: 5.406574394463668e-5
allele num: 18496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.10G>A
  hgvsp: ENST00000600615.1:c.10G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.719G>A
  hgvsp: ENST00000594287.2:c.719G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1698G>A
  hgvsp: ENST00000391910.3:c.1698G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.946G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.169G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.945G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.745G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1320G>A
  hgvsp: ENST00000539396.1:c.1320G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1677G>A
  hgvsp: ENST00000263280.6:c.1677G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1046G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu566Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ

19-47226464-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226464
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226464
    reference: chr 19
allele count: 2
allele frequency: 1.102779003087781e-4
allele num: 18136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000472938
  ensembl transcript: ENST00000600615
  gene symbol: STRN4
  hgvsc: ENST00000600615.1:c.5C>T
  hgvsp: ENSP00000472938.1:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1693C>T
  hgvsp: ENSP00000375777.1:p.Arg565Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.740C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.714C>T
  hgvsp: ENSP00000470634.2:p.Arg239Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1672C>T
  hgvsp: ENSP00000263280.4:p.Arg558Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1041C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1315C>T
  hgvsp: ENSP00000440901.1:p.Arg439Cys
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.164C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.940C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.941C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31262
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg565Cys
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

19-47226469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226469
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226469
    reference: chr 19
allele count: 1
allele frequency: 5.542622769094336e-5
allele num: 18042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.159C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.709C>T
  hgvsp: ENSP00000470634.2:p.Ser237Phe
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.935C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1667C>T
  hgvsp: ENSP00000263280.4:p.Ser556Phe
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1688C>T
  hgvsp: ENSP00000375777.1:p.Ser563Phe
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1036C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.936C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1310C>T
  hgvsp: ENSP00000440901.1:p.Ser437Phe
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.735C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33605
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser563Phe
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

19-47226471-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226471
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226471
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 18008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1034C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.707C>T
  hgvsp: ENST00000594287.2:c.707C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1308C>T
  hgvsp: ENST00000539396.1:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.157C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1665C>T
  hgvsp: ENST00000263280.6:c.1665C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.933C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1686C>T
  hgvsp: ENST00000391910.3:c.1686C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.934C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.733C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13152
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33762
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr562Thr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

19-47226498-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226498
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226498
    reference: chr 19
allele count: 1
allele frequency: 5.796429399489914e-5
allele num: 17252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1007C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.906C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.680C>T
  hgvsp: ENST00000594287.2:c.680C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1638C>T
  hgvsp: ENST00000263280.6:c.1638C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1281C>T
  hgvsp: ENST00000539396.1:c.1281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1659C>T
  hgvsp: ENST00000391910.3:c.1659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.907C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.706C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.130C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala553Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

19-47226501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226501
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226501
    reference: chr 19
allele count: 1
allele frequency: 5.818012566907144e-5
allele num: 17188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1278C>T
  hgvsp: ENST00000539396.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1656C>T
  hgvsp: ENST00000391910.3:c.1656C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1004C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.904C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.703C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.677C>T
  hgvsp: ENST00000594287.2:c.677C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1635C>T
  hgvsp: ENST00000263280.6:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.903C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.127C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35307
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10190
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp552Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-47226504-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226504
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226504
    reference: chr 19
allele count: 1
allele frequency: 5.832264084917765e-5
allele num: 17146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.1001G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.700G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1653G>A
  hgvsp: ENST00000391910.3:c.1653G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1275G>A
  hgvsp: ENST00000539396.1:c.1275G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1632G>A
  hgvsp: ENST00000263280.6:c.1632G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.674G>A
  hgvsp: ENST00000594287.2:c.674G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.900G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.124G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.901G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1393
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33566
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly551Gly
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

19-47226506-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226506
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226506
    reference: chr 19
allele count: 4
allele frequency: 2.349900129244507e-4
allele num: 17022
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.999G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.898G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.698G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1651G>A
  hgvsp: ENSP00000375777.1:p.Gly551Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.899G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1630G>A
  hgvsp: ENSP00000263280.4:p.Gly544Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.672G>A
  hgvsp: ENSP00000470634.2:p.Gly225Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1273G>A
  hgvsp: ENSP00000440901.1:p.Gly425Arg
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.122G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7771
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33482
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly551Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

19-47226507-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226507
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226507
    reference: chr 19
allele count: 1
allele frequency: 5.869922517022775e-5
allele num: 17036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.121C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.897C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.671C>T
  hgvsp: ENST00000594287.2:c.671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1629C>T
  hgvsp: ENST00000263280.6:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1272C>T
  hgvsp: ENST00000539396.1:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.998C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1650C>T
  hgvsp: ENST00000391910.3:c.1650C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.697C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.898C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8184
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His550His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-47226531-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226531
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226531
    reference: chr 19
allele count: 1
allele frequency: 6.294850812035755e-5
allele num: 15886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.873G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.647G>T
  hgvsp: ENST00000594287.2:c.647G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.97G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1626G>T
  hgvsp: ENST00000391910.3:c.1626G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1248G>T
  hgvsp: ENST00000539396.1:c.1248G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.673G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1605G>T
  hgvsp: ENST00000263280.6:c.1605G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.974G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.874G>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4921
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val542Val
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

19-47226533-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226533
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226533
    reference: chr 19
allele count: 5
allele frequency: 3.179852454846095e-4
allele num: 15724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.95G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.645G>C
  hgvsp: ENSP00000470634.2:p.Val216Leu
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1246G>C
  hgvsp: ENSP00000440901.1:p.Val416Leu
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.871G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.671G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1603G>C
  hgvsp: ENSP00000263280.4:p.Val535Leu
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.972G>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1624G>C
  hgvsp: ENSP00000375777.1:p.Val542Leu
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.872G>C
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35381
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33734
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val542Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

19-47226534-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226534
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226534
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 15460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1245C>T
  hgvsp: ENST00000539396.1:c.1245C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.670C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.971C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1602C>T
  hgvsp: ENST00000263280.6:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.870C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.644C>T
  hgvsp: ENST00000594287.2:c.644C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1623C>T
  hgvsp: ENST00000391910.3:c.1623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.94C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.871C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser541Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

19-47226545-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226545
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226545
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 14556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1595-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.663-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1238-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.864-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.87-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.863-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.637-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1616-4G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.964-4G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34530
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1616-4G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/19-47226547-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226547
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226547
    reference: chr 19
allele count: 2
allele frequency: 1.382552191345223e-4
allele num: 14466
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1616-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.964-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.87-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1238-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1595-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.863-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.663-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.637-6G>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.864-6G>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1616-6G>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-47226553-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226553
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226553
    reference: chr 19
allele count: 2
allele frequency: 1.43843498273878e-4
allele num: 13904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.864-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.964-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1595-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.863-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1238-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.637-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.663-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1616-12C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.87-12C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33734
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31595
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-47226578-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47226578
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47226578
    reference: chr 19
allele count: 1
allele frequency: 8.61178091629349e-5
allele num: 11612
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1616-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.964-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.637-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1238-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.663-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.864-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.863-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1595-37C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.87-37C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28580
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-47228015-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228015
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228015
    reference: chr 19
allele count: 2
allele frequency: 1.662427476601333e-5
allele num: 120306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+49C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+49C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5673
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4255
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

19-47228017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228017
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228017
    reference: chr 19
allele count: 1
allele frequency: 8.319329129299013e-6
allele num: 120202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+47G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+47G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

19-47228024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228024
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228024
    reference: chr 19
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+40G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+40G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5548
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

19-47228030-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228030
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228030
    reference: chr 19
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+34C>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+34C>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/19-47228031-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228031
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228031
    reference: chr 19
allele count: 1
allele frequency: 8.307027745472669e-6
allele num: 120380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+33T>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+33T>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4748
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

19-47228031-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228031
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228031
    reference: chr 19
allele count: 1
allele frequency: 8.307027745472669e-6
allele num: 120380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+33T>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+33T>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

19-47228032-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228032
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228032
    reference: chr 19
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+32A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+32A>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13061
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

19-47228035-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228035
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228035
    reference: chr 19
allele count: 32
allele frequency: 2.657101102696958e-4
allele num: 120432
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+29C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+29C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13105
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17252
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

19-47228037-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228037
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228037
    reference: chr 19
allele count: 179
allele frequency: 1.48629124665792e-3
allele num: 120434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+27C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+27C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 12975
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 5
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

19-47228046-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228046
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228046
    reference: chr 19
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+18C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+18C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11969
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17749
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

19-47228047-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228047
    reference: chr 19
allele count: 4
allele frequency: 3.318951211417192e-5
allele num: 120520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+17C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+17C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11974
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

19-47228047-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228047
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228047
    reference: chr 19
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+17C>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+17C>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-47228052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228052
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228052
    reference: chr 19
allele count: 30
allele frequency: 2.488593944421402e-4
allele num: 120550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+12G>A
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+12G>A
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13374
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6654
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8558
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18095
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-47228053-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228053
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228053
    reference: chr 19
allele count: 4
allele frequency: 3.31796011811938e-5
allele num: 120556
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+11C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+11C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-47228054-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228054
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228054
    reference: chr 19
allele count: 22
allele frequency: 1.824575371549894e-4
allele num: 120576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.86+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.963+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1237+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.862+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.636+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.662+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.863+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1594+10A>G
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1615+10A>G
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6644
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13212
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

19-47228065-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228065
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228065
    reference: chr 19
allele count: 3
allele frequency: 2.486366424107809e-5
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1593C>T
  hgvsp: ENST00000263280.6:c.1593C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1236C>T
  hgvsp: ENST00000539396.1:c.1236C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.962C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.861C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.85C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1614C>T
  hgvsp: ENST00000391910.3:c.1614C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.635C>T
  hgvsp: ENST00000594287.2:c.635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.661C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.862C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4753
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18528
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1614C>T
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

19-47228074-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228074
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228074
    reference: chr 19
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.953T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.76T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1227T>C
  hgvsp: ENST00000539396.1:c.1227T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.852T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1605T>C
  hgvsp: ENST00000391910.3:c.1605T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1584T>C
  hgvsp: ENST00000263280.6:c.1584T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.626T>C
  hgvsp: ENST00000594287.2:c.626T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.652T>C
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.853T>C
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18513
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4256
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr535Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

19-47228077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47228077
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 47228077
    reference: chr 19
allele count: 11
allele frequency: 9.110938095316978e-5
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000375777
  ensembl transcript: ENST00000391910
  gene symbol: STRN4
  hgvsc: ENST00000391910.3:c.1602C>T
  hgvsp: ENST00000391910.3:c.1602C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000595357
  gene symbol: STRN4
  hgvsc: ENST00000595357.1:n.849C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000263280
  ensembl transcript: ENST00000263280
  gene symbol: STRN4
  hgvsc: ENST00000263280.6:c.1581C>T
  hgvsp: ENST00000263280.6:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000601631
  gene symbol: STRN4
  hgvsc: ENST00000601631.2:n.850C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000440901
  ensembl transcript: ENST00000539396
  gene symbol: STRN4
  hgvsc: ENST00000539396.1:c.1224C>T
  hgvsp: ENST00000539396.1:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000090372
  ensembl protein: ENSP00000470634
  ensembl transcript: ENST00000594287
  gene symbol: STRN4
  hgvsc: ENST00000594287.2:c.623C>T
  hgvsp: ENST00000594287.2:c.623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594357
  gene symbol: STRN4
  hgvsc: ENST00000594357.2:n.649C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000598074
  gene symbol: STRN4
  hgvsc: ENST00000598074.1:n.73C>T
  variant of: http://identifiers.org/hgnc/15721
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000090372
  ensembl transcript: ENST00000594581
  gene symbol: STRN4
  hgvsc: ENST00000594581.1:n.950C>T
  variant of: http://identifiers.org/hgnc/15721
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13258
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro534Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10442
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.720062208398134e-5
allele num: 10288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.288e0

DP
type: SiteQuality
SIO_000300: 1.830921e6

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
type: SiteQuality
SIO_000300: 1.367e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511852926947267e-5
allele num: 66144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.087e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.299e0

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.89e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

FS
type: SiteQuality
SIO_000300: 4.49e0

DP
type: SiteQuality
SIO_000300: 1.829195e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31985
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3997
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4268
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10387
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.74089226573154e-5
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

QD
type: SiteQuality
SIO_000300: 2.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.941e0

VQSLOD
type: SiteQuality
SIO_000300: -2.317e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 6.732e0

DP
type: SiteQuality
SIO_000300: 1.826163e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2778
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10370
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31860
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3196
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.82424e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.820000000000001e-1

GenotypeQuality
all individuals: 4226
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10304
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31640
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3972
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3162
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.159e0

QD
type: SiteQuality
SIO_000300: 3.05e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.818398e6

FS
type: SiteQuality
SIO_000300: 4.34e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.16e-1

GenotypeQuality
all individuals: 10294
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1648
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2760
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4227
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517634917744187e-5
allele num: 65892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737317581653926e-4
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.418e1

DP
type: SiteQuality
SIO_000300: 1.816036e6

FS
type: SiteQuality
SIO_000300: 3.225e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.503e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31066
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variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.806702e6

MQRankSum
type: SiteQuality
SIO_000300: -1.389e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.426e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e0

QD
type: SiteQuality
SIO_000300: 1.705e1

VQSLOD
type: SiteQuality
SIO_000300: -7.705e-1

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.79431929480901e-5
allele num: 10210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.963e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.336e0

VQSLOD
type: SiteQuality
SIO_000300: -1.366e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.289e0

FS
type: SiteQuality
SIO_000300: 4.679e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.806396e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526298116548124e-5
allele num: 65518
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.968891514077574e-4
allele num: 10158
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.565e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.788392e6

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
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SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.432e1

BaseQRankSum
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SIO_000300: -1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65500
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.41e-1

FS
type: SiteQuality
SIO_000300: 8.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.26e-1

DP
type: SiteQuality
SIO_000300: 1.787044e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65316
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10122
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.539e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
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MQ
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.590330788804071e-4
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.306273062730627e-4
allele num: 65040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.415e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

FS
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 1.719737e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.00080064051241e-4
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64688
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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African
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allele frequency: 4.003202562049639e-4
allele num: 9992
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South Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
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MQRankSum
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DP
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FS
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 64672
num of homozygotes: 0

South Asian
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European (Finnish)
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African
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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Latino
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63862
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 2.00329955220363e-3
allele num: 8486
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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VQSLOD
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QD
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DP
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63578
num of homozygotes: 0

South Asian
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allele frequency: 1.846381093057607e-4
allele num: 16248
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
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SIO_000300: -1.6e-3

FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.517e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.564953e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9676
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.571635129188408e-5
allele num: 63628
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 14018
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2254
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1450
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.93e-2

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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BaseQRankSum
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.57913e5

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
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allele count: 3
allele frequency: 2.775721687638786e-4
allele num: 10808
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7630
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1010
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.545e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.83e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.46e-2

QD
type: SiteQuality
SIO_000300: 8.17e0

DP
type: SiteQuality
SIO_000300: 4.28896e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10590
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 4.807692307692308e-3
allele num: 208
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.353e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.27188e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Latino
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Other
type: Population
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allele frequency: 1.578947368421053e-2
allele num: 190
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South Asian
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allele count: 5
allele frequency: 6.828735318219066e-4
allele num: 7322
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.204585537918871e-4
allele num: 9072
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.455e0

InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.215820961666297e-4
allele num: 9026
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East Asian
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South Asian
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FS
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ClippingRankSum
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MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.68e-2

DP
type: SiteQuality
SIO_000300: 4.23791e5

FS
type: SiteQuality
SIO_000300: 3.136e0

VQSLOD
type: SiteQuality
SIO_000300: -1.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
all individuals: 116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.118568232662192e-4
allele num: 8940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.58e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 3.2e0

FS
type: SiteQuality
SIO_000300: 1.871e0

VQSLOD
type: SiteQuality
SIO_000300: -1.284e0

DP
type: SiteQuality
SIO_000300: 4.31101e5

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.127904353710805e-4
allele num: 8866
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: -1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 4.40859e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.48e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.768e0

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.869e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.15e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.321262766945218e-4
allele num: 8616
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.233654083395016e-4
allele num: 8106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

FS
type: SiteQuality
SIO_000300: 4.423e0

DP
type: SiteQuality
SIO_000300: 4.5823e5

QD
type: SiteQuality
SIO_000300: 1.127e1

VQSLOD
type: SiteQuality
SIO_000300: -3.423e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.45e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 470
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GenotypeQuality
all individuals: 111
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 667
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GenotypeQuality
all individuals: 58
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variant carriers: 9

GenotypeQuality
all individuals: 22
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.324025036109774e-3
allele num: 8308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1726
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.232859636000997e-4
allele num: 8022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.645502645502645e-3
allele num: 756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.494505494505495e-3
allele num: 182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 4.003e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

QD
type: SiteQuality
SIO_000300: 1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.87e-2

DP
type: SiteQuality
SIO_000300: 4.62573e5

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 22195
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variant carriers: 0

GenotypeQuality
all individuals: 54
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 115
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GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.45e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.387e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 4.58011e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.94e0

GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.976190476190476e-3
allele num: 672
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.207729468599034e-3
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.224589762429586e-4
allele num: 8166
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.230314960629921e-4
allele num: 8128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.99e-2

DP
type: SiteQuality
SIO_000300: 4.43199e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.953e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
all individuals: 78
bin: 8.75e1
variant carriers: 60

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 94

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 91

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 764
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GenotypeQuality
all individuals: 83
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variant carriers: 39

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 77

European (Finnish)
type: Population
allele count: 6
allele frequency: 5.357142857142857e-2
allele num: 112
num of homozygotes: 0

African
type: Population
allele count: 557
allele frequency: 2.434440559440559e-1
allele num: 2288
num of homozygotes: 52

Latino
type: Population
allele count: 6
allele frequency: 9.174311926605505e-3
allele num: 654
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 2.808988764044944e-2
allele num: 178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.599803101156781e-3
allele num: 8126
num of homozygotes: 0

East Asian
type: Population
allele count: 37
allele frequency: 4.322429906542056e-2
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 99
allele frequency: 1.216515114278693e-2
allele num: 8138
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 1.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.313e1

DP
type: SiteQuality
SIO_000300: 4.48534e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26395
bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 6153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.43222e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.23e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

VQSLOD
type: SiteQuality
SIO_000300: -3.047e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 2.017e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1568
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 219
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variant carriers: 2

GenotypeQuality
all individuals: 771
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.289324394017535e-4
allele num: 7756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.724137931034483e-3
allele num: 580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: -2.514e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.62e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.164e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

DP
type: SiteQuality
SIO_000300: 4.2892e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.507e0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 49
bin: 8.75e1
variant carriers: 32

GenotypeQuality
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variant carriers: 40

GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 51

GenotypeQuality
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variant carriers: 23

GenotypeQuality
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variant carriers: 32

GenotypeQuality
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GenotypeQuality
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variant carriers: 95

GenotypeQuality
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bin: 1.25e1
variant carriers: 70

GenotypeQuality
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bin: 4.75e1
variant carriers: 16

GenotypeQuality
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variant carriers: 73

GenotypeQuality
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bin: 7.5e0
variant carriers: 86

GenotypeQuality
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bin: 9.25e1
variant carriers: 48

GenotypeQuality
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bin: 7.25e1
variant carriers: 33

GenotypeQuality
all individuals: 768
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variant carriers: 743

GenotypeQuality
all individuals: 6202
bin: 6.25e1
variant carriers: 62

GenotypeQuality
all individuals: 352
bin: 2.75e1
variant carriers: 69

Other
type: Population
allele count: 5
allele frequency: 2.840909090909091e-2
allele num: 176
num of homozygotes: 0

African
type: Population
allele count: 613
allele frequency: 2.658282740676496e-1
allele num: 2306
num of homozygotes: 61

European (Finnish)
type: Population
allele count: 5
allele frequency: 5.681818181818182e-2
allele num: 88
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.342642320085929e-3
allele num: 7448
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 3.221288515406162e-2
allele num: 714
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 9.652509652509652e-3
allele num: 518
num of homozygotes: 0

South Asian
type: Population
allele count: 96
allele frequency: 1.197604790419162e-2
allele num: 8016
num of homozygotes: 2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 1.125e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 4.19953e5

QD
type: SiteQuality
SIO_000300: 1.416e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.13e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2266
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 1

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 6459
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variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.677268475210477e-4
allele num: 2138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7064
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.851e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.36e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.491e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.95293e5

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQ
type: SiteQuality
SIO_000300: 5.738e1

GenotypeQuality
all individuals: 187
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 9542
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 2429
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 807
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GenotypeQuality
all individuals: 2449
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
all individuals: 238
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.262626262626263e-4
allele num: 7920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.463700234192037e-4
allele num: 6832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 5.287e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.560000000000001e-2

DP
type: SiteQuality
SIO_000300: 3.87753e5

QD
type: SiteQuality
SIO_000300: 5.74e0

VQSLOD
type: SiteQuality
SIO_000300: -1.717e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

GenotypeQuality
all individuals: 185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31966
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GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 2043
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GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 221
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9814
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variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 18
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.752851711026616e-4
allele num: 2104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.832e0

QD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 5.734e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.286e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.455e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

DP
type: SiteQuality
SIO_000300: 3.84612e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.569999999999999e-2

GenotypeQuality
all individuals: 123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
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GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9507
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.65e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

DP
type: SiteQuality
SIO_000300: 3.82512e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.748e0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 1319
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2416
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 216
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GenotypeQuality
all individuals: 109
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GenotypeQuality
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GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 33277
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.284356537374775e-4
allele num: 7786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2026
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.16e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 3.56556e5

FS
type: SiteQuality
SIO_000300: 9.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.196e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7768
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.940711462450593e-4
allele num: 2024
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.818000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.21e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 1.502e1

DP
type: SiteQuality
SIO_000300: 3.54217e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 2028
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.575795776867318e-4
allele num: 6346
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.008e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.289e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.18e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 3.53105e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.325e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2012
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 5.186721991701245e-4
allele num: 7712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.50429e5

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.298026998961578e-4
allele num: 7704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2008
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.069e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.923e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.190000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 3.50732e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.816e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.713502398903359e-4
allele num: 5836
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.084e0

DP
type: SiteQuality
SIO_000300: 3.09025e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.491e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.61e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.089e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 7202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 8.659508139937652e-4
allele num: 5774
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.327e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -7.76e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6748
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 270
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -7.98e-2

MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 398
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.909854851031322e-4
allele num: 5236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1734
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.703703703703704e-3
allele num: 270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.98e-2

DP
type: SiteQuality
SIO_000300: 2.67979e5

VQSLOD
type: SiteQuality
SIO_000300: -2.491e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 6.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.840909090909091e-3
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5036
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.559089491736826e-4
allele num: 6414
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 2.51892e5

VQSLOD
type: SiteQuality
SIO_000300: -1.289e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.119999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.199999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 560
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.899696048632219e-4
allele num: 5264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.83e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.562e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.86778e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.219363492257042e-4
allele num: 16402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.15e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 9.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

DP
type: SiteQuality
SIO_000300: 2.101522e6

MQ
type: SiteQuality
SIO_000300: 5.866e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.712509712509713e-5
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 4.012e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

DP
type: SiteQuality
SIO_000300: 2.103072e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.821e0

QD
type: SiteQuality
SIO_000300: 2.729e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.088650754992694e-5
allele num: 16424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66112
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.109541e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.379e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 888
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512081531436175e-5
allele num: 66134
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.113892e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.66e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 299
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512355948095944e-5
allele num: 66122
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

African
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Other
type: Population
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.114474e6

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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QD
type: SiteQuality
SIO_000300: 1.418e1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e-1

GenotypeQuality
all individuals: 12035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3499
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17151
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.691800736576855e-5
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 2.115085e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 2.206e0

VQSLOD
type: SiteQuality
SIO_000300: -1.893e0

QD
type: SiteQuality
SIO_000300: 8.18e0

MQ
type: SiteQuality
SIO_000300: 5.779e1

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4748
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8505
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4244
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12047
bin: 9.75e1
variant carriers: 32

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.384240921597678e-4
allele num: 66146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.648280136349551e-4
allele num: 6454
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.142e1

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.623e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 2.117183e6

MQ
type: SiteQuality
SIO_000300: 5.868e1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8481
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4226
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5505
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 384
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17034
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12109
bin: 9.75e1
variant carriers: 170

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2467
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 169
allele frequency: 1.637914324481489e-2
allele num: 10318
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023523009010099e-5
allele num: 66148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.932409012131716e-4
allele num: 11540
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 2.119303e6

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.61e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

FS
type: SiteQuality
SIO_000300: 1.179e0

QD
type: SiteQuality
SIO_000300: 1.21e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.414e0

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

MQ
type: SiteQuality
SIO_000300: 5.874e1

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4750
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8526
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5508
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511258878645912e-5
allele num: 66170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.122541e6

MQ
type: SiteQuality
SIO_000300: 5.788e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

VQSLOD
type: SiteQuality
SIO_000300: -1.893e0

FS
type: SiteQuality
SIO_000300: 5.14e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.01e-1

GenotypeQuality
all individuals: 270
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4246
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021787084881999e-5
allele num: 66186
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

QD
type: SiteQuality
SIO_000300: 1.344e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.599e0

DP
type: SiteQuality
SIO_000300: 2.122932e6

FS
type: SiteQuality
SIO_000300: 1.882e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11974
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 270
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510893542441e-5
allele num: 66186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.882e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.344e1

DP
type: SiteQuality
SIO_000300: 2.122932e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.599e0

GenotypeQuality
all individuals: 190
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5524
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11985
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 2464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4749
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510710940568632e-5
allele num: 66194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 28
allele frequency: 1.697998787143724e-3
allele num: 16490
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.947e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

QD
type: SiteQuality
SIO_000300: 1.016e1

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

DP
type: SiteQuality
SIO_000300: 2.125084e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.84e-1

GenotypeQuality
all individuals: 5528
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11961
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819505094614265e-4
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.182e1

MQ
type: SiteQuality
SIO_000300: 5.829e1

VQSLOD
type: SiteQuality
SIO_000300: -2.249e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.125718e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

GenotypeQuality
all individuals: 3496
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11966
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8598
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.661531025315691e-4
allele num: 66204
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.332004851845434e-4
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.25925925925926e-4
allele num: 6480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 2.126282e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11945
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5530
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598752598752599e-4
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 2.129778e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.926e0

MQ
type: SiteQuality
SIO_000300: 5.797e1

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 1.313e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11942
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8634
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50961625554784e-5
allele num: 66242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.129644e6

VQSLOD
type: SiteQuality
SIO_000300: -4.711e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.38e-1

FS
type: SiteQuality
SIO_000300: 1.254e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

QD
type: SiteQuality
SIO_000300: 9.06e0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11943
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 8621
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5510
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4245
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4732
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.528028496392671e-5
allele num: 66254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.062705698943357e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.191e0

DP
type: SiteQuality
SIO_000300: 2.130317e6

QD
type: SiteQuality
SIO_000300: 1.276e1