1-144814808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814808
    reference: chr 1
allele count: 9
allele frequency: 7.87015985169121e-5
allele num: 114356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-500C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.249C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.126C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.442C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.446C>T
  hgvsp: ENSP00000390934.2:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.446C>T
  hgvsp: ENSP00000342975.4:p.Pro149Leu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.442C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.442C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.442C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.442C>T
  hgvsp: ENSP00000364702.3:p.Pro148Leu
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10892
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10416
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro148Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-144814809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814809
    reference: chr 1
allele count: 11
allele frequency: 9.6681198143721e-5
allele num: 113776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.443G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.127G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.443G>A
  hgvsp: ENST00000375552.4:c.443G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.443G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.250G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.447G>A
  hgvsp: ENST00000338347.4:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.443G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.443G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-499G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.447G>A
  hgvsp: ENST00000440491.2:c.447G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10949
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27261
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Pro148Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

1-144814809-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814809
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814809
    reference: chr 1
allele count: 1
allele frequency: 8.789199831247363e-6
allele num: 113776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.443G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.443G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-499G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.127G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.447G>C
  hgvsp: ENST00000440491.2:c.447G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.443G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.443G>C
  hgvsp: ENST00000375552.4:c.443G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.447G>C
  hgvsp: ENST00000338347.4:c.447G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.250G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.443G>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36488
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro148Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-144814812-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814812
    reference: chr 1
allele count: 4
allele frequency: 3.515927149989452e-5
allele num: 113768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-496C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.446C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.446C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.446C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.253C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.130C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.446C>A
  hgvsp: ENSP00000364702.3:p.Asp149Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.446C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.450C>A
  hgvsp: ENSP00000390934.2:p.Asp150Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.450C>A
  hgvsp: ENSP00000342975.4:p.Asp150Glu
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10047
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27026
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp149Glu
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-144814812-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814812
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814812
    reference: chr 1
allele count: 8
allele frequency: 7.031854299978904e-5
allele num: 113768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.450C>G
  hgvsp: ENSP00000342975.4:p.Asp150Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.446C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.446C>G
  hgvsp: ENSP00000364702.3:p.Asp149Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.253C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-496C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.450C>G
  hgvsp: ENSP00000390934.2:p.Asp150Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.446C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.446C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.130C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.446C>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10047
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp149Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-144814813-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814813
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814813
    reference: chr 1
allele count: 1
allele frequency: 8.798944126704796e-6
allele num: 113650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-495A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.131A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.447A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.447A>C
  hgvsp: ENSP00000364702.3:p.Lys150Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.451A>C
  hgvsp: ENSP00000342975.4:p.Lys151Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.451A>C
  hgvsp: ENSP00000390934.2:p.Lys151Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.254A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.447A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.447A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.447A>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys150Gln
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-144814814-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814814
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814814
    reference: chr 1
allele count: 1
allele frequency: 8.809641271407429e-6
allele num: 113512
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.448A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.452A>T
  hgvsp: ENSP00000342975.4:p.Lys151Met
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.448A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-494A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.452A>T
  hgvsp: ENSP00000390934.2:p.Lys151Met
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.448A>T
  hgvsp: ENSP00000364702.3:p.Lys150Met
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.255A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.132A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.448A>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.448A>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys150Met
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

1-144814816-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814816
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814816
    reference: chr 1
allele count: 2
allele frequency: 1.766659600028267e-5
allele num: 113208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.450T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.450T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.450T>C
  hgvsp: ENSP00000364702.3:p.Ser151Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.257T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.454T>C
  hgvsp: ENSP00000390934.2:p.Ser152Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-492T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.134T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.454T>C
  hgvsp: ENSP00000342975.4:p.Ser152Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.450T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.450T>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser151Pro
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-144814822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814822
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814822
    reference: chr 1
allele count: 8
allele frequency: 7.126948775055679e-5
allele num: 112250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.456G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.456G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.140G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.460G>A
  hgvsp: ENSP00000390934.2:p.Gly154Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.460G>A
  hgvsp: ENSP00000342975.4:p.Gly154Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-486G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.456G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.263G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.456G>A
  hgvsp: ENSP00000364702.3:p.Gly153Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.456G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25152
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9174
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly153Arg
num of homozygotes: 1
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-144814823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814823
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814823
    reference: chr 1
allele count: 38
allele frequency: 3.389830508474576e-4
allele num: 112100
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-485G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.461G>A
  hgvsp: ENSP00000342975.4:p.Gly154Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.461G>A
  hgvsp: ENSP00000390934.2:p.Gly154Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.141G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.457G>A
  hgvsp: ENSP00000364702.3:p.Gly153Glu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.457G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.457G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.457G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.457G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.264G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24984
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9076
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1854
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly153Glu
num of homozygotes: 1
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/1-144814825-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814825
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814825
    reference: chr 1
allele count: 5
allele frequency: 4.485994724470204e-5
allele num: 111458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.459C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.143C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.459C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.459C>A
  hgvsp: ENSP00000364702.3:p.Gln154Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.459C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.463C>A
  hgvsp: ENSP00000390934.2:p.Gln155Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.463C>A
  hgvsp: ENSP00000342975.4:p.Gln155Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.266C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.459C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-483C>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24260
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln154Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-144814826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814826
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814826
    reference: chr 1
allele count: 1
allele frequency: 8.995232526760817e-6
allele num: 111170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.460A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.460A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.460A>G
  hgvsp: ENSP00000364702.3:p.Gln154Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.144A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.464A>G
  hgvsp: ENSP00000342975.4:p.Gln155Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.464A>G
  hgvsp: ENSP00000390934.2:p.Gln155Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.460A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.267A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.460A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-482A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5383
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln154Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

1-144814830-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814830
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814830
    reference: chr 1
allele count: 2
allele frequency: 1.80583646344987e-5
allele num: 110752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.468C>T
  hgvsp: ENST00000440491.2:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.464C>T
  hgvsp: ENST00000375552.4:c.464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-478C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.468C>T
  hgvsp: ENST00000338347.4:c.468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.271C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.464C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.464C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.464C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.148C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.464C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31166
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp155Asp
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

1-144814833-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814833
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814833
    reference: chr 1
allele count: 1
allele frequency: 9.099181073703366e-6
allele num: 109900
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.471C>G
  hgvsp: ENST00000338347.4:c.471C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.471C>G
  hgvsp: ENST00000440491.2:c.471C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.467C>G
  hgvsp: ENST00000375552.4:c.467C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.274C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.151C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.467C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-475C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.467C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.467C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.467C>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22353
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu156Leu
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-144814834-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814834
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814834
    reference: chr 1
allele count: 2
allele frequency: 1.816332461493752e-5
allele num: 110112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.468C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.468C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.468C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.152C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.472C>T
  hgvsp: ENSP00000390934.2:p.Gln158Ter
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.468C>T
  hgvsp: ENSP00000364702.3:p.Gln157Ter
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.472C>T
  hgvsp: ENSP00000342975.4:p.Gln158Ter
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-474C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.275C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.468C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5784
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1919
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln157Ter
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

1-144814835-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814835
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814835
    reference: chr 1
allele count: 1
allele frequency: 9.101334255601872e-6
allele num: 109874
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.469A>G
  hgvsp: ENSP00000364702.3:p.Gln157Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.276A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.469A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.153A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.469A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.473A>G
  hgvsp: ENSP00000342975.4:p.Gln158Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.473A>G
  hgvsp: ENSP00000390934.2:p.Gln158Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-473A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.469A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.469A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12171
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln157Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-144814852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814852
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814852
    reference: chr 1
allele count: 1
allele frequency: 9.126752336448597e-6
allele num: 109568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.486G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.486G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.490G>A
  hgvsp: ENSP00000342975.4:p.Gly164Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.170G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.486G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.293G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-456G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.486G>A
  hgvsp: ENSP00000364702.3:p.Gly163Arg
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.486G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.490G>A
  hgvsp: ENSP00000390934.2:p.Gly164Arg
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly163Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-144814855-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814855
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814855
    reference: chr 1
allele count: 2
allele frequency: 1.826017091519977e-5
allele num: 109528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-453T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.493T>G
  hgvsp: ENSP00000342975.4:p.Cys165Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.493T>G
  hgvsp: ENSP00000390934.2:p.Cys165Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.489T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.489T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.173T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.489T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.489T>G
  hgvsp: ENSP00000364702.3:p.Cys164Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.296T>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.489T>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 16059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20750
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Cys164Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

1-144814860-A-ACTCCCTCTCTGATACAGAGGAAGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814860
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814884
    reference: chr 1
allele count: 1
allele frequency: 9.138762977043427e-6
allele num: 109424
alternate allele: ACTCCCTCTCTGATACAGAGGAAGC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: stop_gained
  consequence: inframe_insertion
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

1-144814862-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814862
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814862
    reference: chr 1
allele count: 1
allele frequency: 9.143609531298575e-6
allele num: 109366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.496T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.303T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.496T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.180T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.500T>A
  hgvsp: ENSP00000390934.2:p.Leu167Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.496T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.500T>A
  hgvsp: ENSP00000342975.4:p.Leu167Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.496T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.496T>A
  hgvsp: ENSP00000364702.3:p.Leu166Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-446T>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu166Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-144814864-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814864
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814864
    reference: chr 1
allele count: 1
allele frequency: 9.159522239319997e-6
allele num: 109176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.305G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.498G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.498G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.502G>T
  hgvsp: ENSP00000342975.4:p.Ala168Ser
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.502G>T
  hgvsp: ENSP00000390934.2:p.Ala168Ser
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.498G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.498G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.182G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-444G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.498G>T
  hgvsp: ENSP00000364702.3:p.Ala167Ser
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala167Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/1-144814868-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814868
    reference: chr 1
allele count: 7
allele frequency: 6.416131989000916e-5
allele num: 109100
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.502A>C
  hgvsp: ENSP00000364702.3:p.Gln168Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.309A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.506A>C
  hgvsp: ENSP00000342975.4:p.Gln169Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.506A>C
  hgvsp: ENSP00000390934.2:p.Gln169Pro
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.186A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-440A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.502A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.502A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.502A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.502A>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2874
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18395
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln168Pro
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

1-144814869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814869
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814869
    reference: chr 1
allele count: 2
allele frequency: 1.835232799280589e-5
allele num: 108978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.507G>A
  hgvsp: ENST00000338347.4:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.310G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.507G>A
  hgvsp: ENST00000440491.2:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.503G>A
  hgvsp: ENST00000375552.4:c.503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.503G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.503G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.503G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.503G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.187G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-439G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6032
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln168Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-144814872-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814872
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814872
    reference: chr 1
allele count: 1
allele frequency: 9.191176470588234e-6
allele num: 108800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-436C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.506C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.190C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.506C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.506C>A
  hgvsp: ENSP00000364702.3:p.His169Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.510C>A
  hgvsp: ENSP00000390934.2:p.His170Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.313C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.510C>A
  hgvsp: ENSP00000342975.4:p.His170Gln
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.506C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.506C>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His169Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

1-144814873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814873
    reference: chr 1
allele count: 3
allele frequency: 2.757657094532485e-5
allele num: 108788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.507C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.507C>T
  hgvsp: ENSP00000364702.3:p.Leu170Phe
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.507C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.511C>T
  hgvsp: ENSP00000390934.2:p.Leu171Phe
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.507C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.511C>T
  hgvsp: ENSP00000342975.4:p.Leu171Phe
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.507C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.191C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.314C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-435C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1567
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu170Phe
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

1-144814877-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814877
    reference: chr 1
allele count: 21
allele frequency: 1.939953810623557e-4
allele num: 108250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.515T>A
  hgvsp: ENSP00000342975.4:p.Val172Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-431T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.511T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.318T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.511T>A
  hgvsp: ENSP00000364702.3:p.Val171Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.515T>A
  hgvsp: ENSP00000390934.2:p.Val172Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.195T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.511T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.511T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.511T>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18832
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18857
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val171Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

1-144814883-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814883
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814882
    reference: chr 1
allele count: 1
allele frequency: 9.288673391666203e-6
allele num: 107658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.518delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.202delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.518delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-424delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.518delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.522delG
  hgvsp: ENSP00000342975.4:p.Lys174AsnfsTer157
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.518delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.518delG
  hgvsp: ENSP00000364702.3:p.Lys173AsnfsTer157
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.325delG
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.522delG
  hgvsp: ENSP00000390934.2:p.Lys174AsnfsTer157
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 5616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18371
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys173AsnfsTer157
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: AG
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-144814887-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814887
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814887
    reference: chr 1
allele count: 1
allele frequency: 9.305615008095886e-6
allele num: 107462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.205C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.521C>T
  hgvsp: ENST00000375552.4:c.521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.525C>T
  hgvsp: ENST00000338347.4:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.521C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.525C>T
  hgvsp: ENST00000440491.2:c.525C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-421C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.521C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.328C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.521C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.521C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1161
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu174Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

1-144814889-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814889
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814889
    reference: chr 1
allele count: 1
allele frequency: 9.332362767605502e-6
allele num: 107154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.523G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.523G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.330G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.523G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.527G>A
  hgvsp: ENSP00000390934.2:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.523G>A
  hgvsp: ENSP00000364702.3:p.Ser175Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.207G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-419G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.527G>A
  hgvsp: ENSP00000342975.4:p.Ser176Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.523G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser175Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

1-144814892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814892
    reference: chr 1
allele count: 6
allele frequency: 5.612092187967674e-5
allele num: 106912
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.333C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.526C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.526C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.526C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.210C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.530C>T
  hgvsp: ENSP00000342975.4:p.Pro177Leu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.526C>T
  hgvsp: ENSP00000364702.3:p.Pro176Leu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.526C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.530C>T
  hgvsp: ENSP00000390934.2:p.Pro177Leu
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-416C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17902
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6079
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro176Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-144814895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814895
    reference: chr 1
allele count: 9
allele frequency: 8.438027376711045e-5
allele num: 106660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+1G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+1G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18909
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17835
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 2.75e1
  variant carriers: 0
hgvs: c.528+1G>A
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-144814900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814900
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814900
    reference: chr 1
allele count: 2
allele frequency: 1.886009580928671e-5
allele num: 106044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+6G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+6G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6834
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1558
  bin: 9.75e1
  variant carriers: 2
hgvs: c.528+6G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

1-144814910-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814910
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814910
    reference: chr 1
allele count: 3
allele frequency: 2.922096896733096e-5
allele num: 102666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+16G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+16G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3869
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

1-144814911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814911
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814911
    reference: chr 1
allele count: 4
allele frequency: 3.940032702271429e-5
allele num: 101522
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+17C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+17C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16843
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-144814912-C-CAGAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814912
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814916
    reference: chr 1
allele count: 9
allele frequency: 8.857221588001417e-5
allele num: 101612
alternate allele: CAGAT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+18_335+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+18_528+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+18_212+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+18_528+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+18_528+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+18_-414+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+18_528+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+18_528+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+18_532+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+18_532+19insAGAT
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11522
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16397
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13156
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

1-144814916-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814916
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814916
    reference: chr 1
allele count: 32
allele frequency: 3.198848414570754e-4
allele num: 100036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+22T>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+22T>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8059
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16340
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 14436
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9291
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-144814921-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814921
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814921
    reference: chr 1
allele count: 1
allele frequency: 1.021972406745018e-5
allele num: 97850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+27C>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+27C>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10967
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20995
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-144814923-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814923
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814923
    reference: chr 1
allele count: 27
allele frequency: 2.773155851358847e-4
allele num: 97362
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+29A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+29A>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21346
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-144814923-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814923
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814923
    reference: chr 1
allele count: 1
allele frequency: 1.027094759762536e-5
allele num: 97362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+29A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+29A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/1-144814926-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814926
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814925
    reference: chr 1
allele count: 2
allele frequency: 2.084549320436922e-5
allele num: 95944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+36delC
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+36delC
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6066
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: AC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

1-144814929-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814929
    reference: chr 1
allele count: 2
allele frequency: 2.122196048470958e-5
allele num: 94242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+35C>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+35C>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8221
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

1-144814933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814933
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814933
    reference: chr 1
allele count: 1
allele frequency: 1.102803326054831e-5
allele num: 90678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+39G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+39G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10923
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7315
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-144814934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814934
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814934
    reference: chr 1
allele count: 27
allele frequency: 2.978948762081292e-4
allele num: 90636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+40C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+40C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21221
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7202
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3436
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD

1-144814943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814943
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814943
    reference: chr 1
allele count: 1
allele frequency: 1.234202211690363e-5
allele num: 81024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+49G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+49G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2610
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7378
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-144814944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814944
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814944
    reference: chr 1
allele count: 14
allele frequency: 1.750612714450058e-4
allele num: 79972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+50G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+50G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18429
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

1-144814944-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144814944
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144814944
    reference: chr 1
allele count: 1
allele frequency: 1.250437653178613e-5
allele num: 79972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.528+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000483630
  gene symbol: NBPF9
  hgvsc: ENST00000483630.1:n.528+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.532+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.532+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.528+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.335+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.212+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-414+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.528+50G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.528+50G>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14688
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8199
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-144815888-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815888
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815888
    reference: chr 1
allele count: 4
allele frequency: 8.521153764219675e-5
allele num: 46942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.78C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-48C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-48C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14190
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21243
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11832
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3729
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-144815892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815892
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815892
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 48218
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.82C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-44C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-44C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22316
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-144815900-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815900
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815900
    reference: chr 1
allele count: 27
allele frequency: 4.801707273697315e-4
allele num: 56230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.90T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-36T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-36T>C
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20930
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16955
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2010
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 4
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

1-144815903-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815903
    reference: chr 1
allele count: 7
allele frequency: 1.146113039491781e-4
allele num: 61076
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.93G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-33G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-33G>T
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20025
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16900
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-144815909-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815909
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815909
    reference: chr 1
allele count: 245
allele frequency: 3.479224062029595e-3
allele num: 70418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-27T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.99T>C
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15832
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 3.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26049
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5658
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 9.75e1
  variant carriers: 216
num of homozygotes: 5
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

1-144815912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815912
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815912
    reference: chr 1
allele count: 5
allele frequency: 6.708527880641872e-5
allele num: 74532
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.102G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-24G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-24G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28247
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13383
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-144815915-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815915
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815915
    reference: chr 1
allele count: 9
allele frequency: 1.153136531365314e-4
allele num: 78048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.105C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-21C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-21C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13083
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

1-144815918-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815918
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815918
    reference: chr 1
allele count: 2
allele frequency: 2.434096828371833e-5
allele num: 82166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.108A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-18A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-18A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5030
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-144815920-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815920
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815920
    reference: chr 1
allele count: 3
allele frequency: 3.572534355872056e-5
allele num: 83974
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.110A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-16A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-16A>C
  variant of: http://identifiers.org/hgnc/31991
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32698
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

1-144815928-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815928
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815928
    reference: chr 1
allele count: 101
allele frequency: 1.136952067901929e-3
allele num: 88834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.118A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-8A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 35085
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 3.25e1
  variant carriers: 1
hgvs: c.529-8A>G
num of homozygotes: 10
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-144815932-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815932
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815932
    reference: chr 1
allele count: 1
allele frequency: 1.10226846850819e-5
allele num: 90722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-413-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.529-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.336-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.529-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.213-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.122A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.533-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.533-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.529-4A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.529-4A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
hgvs: c.529-4A>G
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

1-144815941-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815941
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815941
    reference: chr 1
allele count: 1
allele frequency: 1.056479388087139e-5
allele num: 94654
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.131G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.341G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-408G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.538G>C
  hgvsp: ENSP00000342975.4:p.Asp180His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.534G>C
  hgvsp: ENSP00000364702.3:p.Asp179His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.218G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.538G>C
  hgvsp: ENSP00000390934.2:p.Asp180His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.534G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.534G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.534G>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37745
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4547
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp179His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-144815946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815946
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815946
    reference: chr 1
allele count: 12
allele frequency: 1.239566977935708e-4
allele num: 96808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.3C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-403C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.543C>T
  hgvsp: ENST00000338347.4:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.543C>T
  hgvsp: ENST00000440491.2:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.136C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.223C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.346C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.539C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.539C>T
  hgvsp: ENST00000375552.4:c.539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.539C>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.539C>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38474
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Asn180Asn
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-144815947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815947
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815947
    reference: chr 1
allele count: 7
allele frequency: 7.103137557332467e-5
allele num: 98548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.544G>A
  hgvsp: ENSP00000390934.2:p.Asp182Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.137G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.544G>A
  hgvsp: ENSP00000342975.4:p.Asp182Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-402G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.347G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.224G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.540G>A
  hgvsp: ENSP00000364702.3:p.Asp181Asn
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.540G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.540G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.540G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.4G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp181Asn
num of homozygotes: 2
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-144815947-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815947
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815947
    reference: chr 1
allele count: 2
allele frequency: 2.029467873523562e-5
allele num: 98548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.4G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.224G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-402G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.540G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.544G>T
  hgvsp: ENSP00000390934.2:p.Asp182Tyr
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.540G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.540G>T
  hgvsp: ENSP00000364702.3:p.Asp181Tyr
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.137G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.347G>T
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.544G>T
  hgvsp: ENSP00000342975.4:p.Asp182Tyr
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.540G>T
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp181Tyr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-144815950-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815950
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815950
    reference: chr 1
allele count: 16
allele frequency: 1.613488766084466e-4
allele num: 99164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.547G>C
  hgvsp: ENSP00000342975.4:p.Asp183His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.7G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.140G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.543G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.547G>C
  hgvsp: ENSP00000390934.2:p.Asp183His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.543G>C
  hgvsp: ENSP00000364702.3:p.Asp182His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-399G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.227G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.543G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.350G>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.543G>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39224
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp182His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-144815951-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815951
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815951
    reference: chr 1
allele count: 13
allele frequency: 1.297068624907709e-4
allele num: 100226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.8A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.548A>G
  hgvsp: ENSP00000390934.2:p.Asp183Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.228A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.141A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.544A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.544A>G
  hgvsp: ENSP00000364702.3:p.Asp182Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-398A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.351A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.548A>G
  hgvsp: ENSP00000342975.4:p.Asp183Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.544A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.544A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp182Gly
num of homozygotes: 1
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-144815953-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815953
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815953
    reference: chr 1
allele count: 1
allele frequency: 9.689171382063406e-6
allele num: 103208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.546A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.353A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.550A>C
  hgvsp: ENSP00000390934.2:p.Asn184His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.546A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.10A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.546A>C
  hgvsp: ENSP00000364702.3:p.Asn183His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.550A>C
  hgvsp: ENSP00000342975.4:p.Asn184His
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.143A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.230A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-396A>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.546A>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4400
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn183His
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-144815953-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815953
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815953
    reference: chr 1
allele count: 43503
allele frequency: 4.215080226339044e-1
allele num: 103208
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.550A>G
  hgvsp: ENSP00000390934.2:p.Asn184Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.546A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.546A>G
  hgvsp: ENSP00000364702.3:p.Asn183Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.143A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.353A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.10A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-396A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.550A>G
  hgvsp: ENSP00000342975.4:p.Asn184Asp
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.546A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.546A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.230A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.75e1
  variant carriers: 1662
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 5.25e1
  variant carriers: 1535
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 1.25e1
  variant carriers: 2466
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 8.75e1
  variant carriers: 1189
genotype depth: GenotypeDepth
  all individuals: 17220
  bin: 2.25e1
  variant carriers: 2618
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.25e1
  variant carriers: 1471
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 9.75e1
  variant carriers: 3545
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 6.75e1
  variant carriers: 1796
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 7.5e0
  variant carriers: 1690
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.75e1
  variant carriers: 2581
genotype depth: GenotypeDepth
  all individuals: 4400
  bin: 2.75e1
  variant carriers: 2476
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 2.5e0
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 1468
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 7.25e1
  variant carriers: 1818
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.25e1
  variant carriers: 2273
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.75e1
  variant carriers: 1674
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.25e1
  variant carriers: 887
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 5.75e1
  variant carriers: 1668
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 6.25e1
  variant carriers: 1900
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 8.25e1
  variant carriers: 1465
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 1.75e1
  variant carriers: 990
hgvs: p.Asn183Asp
num of homozygotes: 11170
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-144815955-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815955
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815955
    reference: chr 1
allele count: 1
allele frequency: 9.1748169624016e-6
allele num: 108994
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.548T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.355T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-394T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.232T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.552T>C
  hgvsp: ENST00000338347.4:c.552T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.548T>C
  hgvsp: ENST00000375552.4:c.548T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.145T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.552T>C
  hgvsp: ENST00000440491.2:c.552T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.548T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.12T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.548T>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn183Asn
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

1-144815956-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815956
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815956
    reference: chr 1
allele count: 1
allele frequency: 9.176332403464983e-6
allele num: 108976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.146G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.549G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.553G>A
  hgvsp: ENSP00000342975.4:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.553G>A
  hgvsp: ENSP00000390934.2:p.Glu185Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.13G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.233G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-393G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.549G>A
  hgvsp: ENSP00000364702.3:p.Glu184Lys
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.549G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.356G>A
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.549G>A
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu184Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

1-144815960-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815960
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815960
    reference: chr 1
allele count: 1
allele frequency: 9.17380694640662e-6
allele num: 109006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.17A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.553A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.557A>G
  hgvsp: ENSP00000390934.2:p.Asp186Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.557A>G
  hgvsp: ENSP00000342975.4:p.Asp186Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.360A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.553A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-389A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.553A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.553A>G
  hgvsp: ENSP00000364702.3:p.Asp185Gly
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.237A>G
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.150A>G
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17718
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp185Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

1-144815963-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 144815963
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 144815963
    reference: chr 1
allele count: 1
allele frequency: 9.174143593695528e-6
allele num: 109002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000468645
  gene symbol: NBPF9
  hgvsc: ENST00000468645.1:n.556T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000281815
  ensembl transcript: ENST00000281815
  gene symbol: NBPF9
  hgvsc: ENST00000281815.8:c.-386T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000491652
  gene symbol: NBPF9
  hgvsc: ENST00000491652.1:n.556T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000342975
  ensembl transcript: ENST00000338347
  gene symbol: NBPF9
  hgvsc: ENST00000338347.4:c.560T>C
  hgvsp: ENSP00000342975.4:p.Val187Ala
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000390934
  ensembl transcript: ENST00000440491
  gene symbol: NBPF9
  hgvsc: ENST00000440491.2:c.560T>C
  hgvsp: ENSP00000390934.2:p.Val187Ala
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168614
  ensembl protein: ENSP00000364702
  ensembl transcript: ENST00000375552
  gene symbol: NBPF9
  hgvsc: ENST00000375552.4:c.556T>C
  hgvsp: ENSP00000364702.3:p.Val186Ala
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000472811
  gene symbol: NBPF9
  hgvsc: ENST00000472811.1:n.20T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000465793
  gene symbol: NBPF9
  hgvsc: ENST00000465793.1:n.363T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000496755
  gene symbol: NBPF9
  hgvsc: ENST00000496755.1:n.556T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000471873
  gene symbol: NBPF9
  hgvsc: ENST00000471873.1:n.240T>C
  variant of: http://identifiers.org/hgnc/31991
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168614
  ensembl transcript: ENST00000484811
  gene symbol: NBPF9
  hgvsc: ENST00000484811.1:n.153T>C
  variant of: http://identifiers.org/hgnc/31991
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val186Ala
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7206
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3938
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1785
bin: 9.75e1
variant carriers: 8

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8950
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.629272989889263e-5
allele num: 62310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.66121552355382e-4
allele num: 8194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.375e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.63e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

DP
type: SiteQuality
SIO_000300: 1.606547e6

FS
type: SiteQuality
SIO_000300: 3.086e0

MQ
type: SiteQuality
SIO_000300: 3.023e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 356
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7000
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 176
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1694
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 36488
bin: 6.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.614205004035513e-4
allele num: 61950
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.12739571589628e-4
allele num: 8870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.262e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

VQSLOD
type: SiteQuality
SIO_000300: -5.2e0

MQ
type: SiteQuality
SIO_000300: 2.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.604443e6

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3960
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.614205004035513e-5
allele num: 61950
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.262e0

QD
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

DP
type: SiteQuality
SIO_000300: 1.604443e6

GenotypeQuality
all individuals: 919
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.508566275924256e-4
allele num: 8872
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11156
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.705e0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

DP
type: SiteQuality
SIO_000300: 1.586591e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.16e0

MQ
type: SiteQuality
SIO_000300: 2.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.249e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

GenotypeQuality
all individuals: 36491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 954
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.963786303334529e-5
allele num: 11156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8872
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.294478527607362e-4
allele num: 16300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.16e0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.586591e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 2.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.705e0

GenotypeQuality
all individuals: 6978
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2023
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4416
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8154
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11144
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.128158844765343e-4
allele num: 8864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 2.921e1

VQSLOD
type: SiteQuality
SIO_000300: -6.258e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.62e0

QD
type: SiteQuality
SIO_000300: 9.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.184e0

DP
type: SiteQuality
SIO_000300: 1.581882e6

GenotypeQuality
all individuals: 395
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1683
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2011
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8152
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.141751627564181e-5
allele num: 16282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8842
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.01e-1

DP
type: SiteQuality
SIO_000300: 1.576377e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

MQ
type: SiteQuality
SIO_000300: 2.94e1

QD
type: SiteQuality
SIO_000300: 1.348e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.621e0

VQSLOD
type: SiteQuality
SIO_000300: -5.03e0

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.247385854387218e-5
allele num: 61588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.264e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.306e0

MQ
type: SiteQuality
SIO_000300: 2.926e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

DP
type: SiteQuality
SIO_000300: 1.56713e6

MQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

GenotypeQuality
all individuals: 1650
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1868
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.311690441055911e-4
allele num: 60990
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.371e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

DP
type: SiteQuality
SIO_000300: 1.536492e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

MQ
type: SiteQuality
SIO_000300: 2.952e1

FS
type: SiteQuality
SIO_000300: 7.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.433e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.31e-1

GenotypeQuality
all individuals: 5204
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 36

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 336
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10964
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.20937181886842e-5
allele num: 60906
num of homozygotes: 1

South Asian
type: Population
allele count: 33
allele frequency: 2.035529237601776e-3
allele num: 16212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.531535e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 2.937e1

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
SIO_000300: 1.617e1

FS
type: SiteQuality
SIO_000300: 4.285e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.683241252302026e-4
allele num: 10860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.652237129072764e-5
allele num: 60524
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.7982e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 2.983e1

QD
type: SiteQuality
SIO_000300: 4.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.722e0

DP
type: SiteQuality
SIO_000300: 1.512902e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1365
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.65694591728526e-5
allele num: 60352
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.504228e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 3.021e1

QD
type: SiteQuality
SIO_000300: 1.228e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

MQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10750
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.325573661456601e-5
allele num: 60140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -4.947e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

DP
type: SiteQuality
SIO_000300: 1.489179e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 2.946e1

QD
type: SiteQuality
SIO_000300: 9.9e0

FS
type: SiteQuality
SIO_000300: 2.944e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1583
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.678866429386878e-5
allele num: 59564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

DP
type: SiteQuality
SIO_000300: 1.473752e6

MQRankSum
type: SiteQuality
SIO_000300: -1.614e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 2.879e1

QD
type: SiteQuality
SIO_000300: 5.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.916e0

FS
type: SiteQuality
SIO_000300: 2.295e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
all individuals: 1470
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 1597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1033
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30511
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.350308228357009e-5
allele num: 59696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQ
type: SiteQuality
SIO_000300: 2.973e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: -4.396e0

DP
type: SiteQuality
SIO_000300: 1.471393e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e0

QD
type: SiteQuality
SIO_000300: 8.43e0

GenotypeQuality
all individuals: 772
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.678584617450566e-5
allele num: 59574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10644
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.941e1

DP
type: SiteQuality
SIO_000300: 1.465774e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -1.119e0

VQSLOD
type: SiteQuality
SIO_000300: -4.731e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

FS
type: SiteQuality
SIO_000300: 5.934e0

QD
type: SiteQuality
SIO_000300: 7.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

GenotypeQuality
all individuals: 296
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5301
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variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1571
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1474
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variant carriers: 0

GenotypeQuality
all individuals: 32524
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.255473539346929e-5
allele num: 15986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.996e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

VQSLOD
type: SiteQuality
SIO_000300: -5.227e0

QD
type: SiteQuality
SIO_000300: 2.298e1

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

FS
type: SiteQuality
SIO_000300: 1.0368e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.23e-1

DP
type: SiteQuality
SIO_000300: 1.451885e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

GenotypeQuality
all individuals: 144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 32394
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1569
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variant carriers: 2

GenotypeQuality
all individuals: 1394
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.906941266209001e-4
allele num: 10488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.11e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQ
type: SiteQuality
SIO_000300: 3.012e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

DP
type: SiteQuality
SIO_000300: 1.448703e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
type: SiteQuality
SIO_000300: 1.544e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -6.475e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5185
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variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.1936022917164e-4
allele num: 8378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2366e1

MQRankSum
type: SiteQuality
SIO_000300: 8.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.837e0

DP
type: SiteQuality
SIO_000300: 1.446319e6

QD
type: SiteQuality
SIO_000300: 1.6e-1

MQ
type: SiteQuality
SIO_000300: 3.118e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.94e-1

GenotypeQuality
all individuals: 555
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 336
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GenotypeQuality
all individuals: 1464
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.67937392939912e-5
allele num: 59546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

DP
type: SiteQuality
SIO_000300: 1.445372e6

MQRankSum
type: SiteQuality
SIO_000300: -1.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

FS
type: SiteQuality
SIO_000300: 9.247999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.387e0

MQ
type: SiteQuality
SIO_000300: 3.168e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1319
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.680898272036576e-5
allele num: 59492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.209e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.546e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 1.6199e1

MQ
type: SiteQuality
SIO_000300: 3.138e1

DP
type: SiteQuality
SIO_000300: 1.444808e6

GenotypeQuality
all individuals: 785
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 737
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7441
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1546
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GenotypeQuality
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GenotypeQuality
all individuals: 1007
bin: 7.5e0
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GenotypeQuality
all individuals: 486
bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1418
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1574
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variant carriers: 7

GenotypeQuality
all individuals: 1229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.928640308582449e-4
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.410428931875525e-5
allele num: 59450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
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MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

MQ
type: SiteQuality
SIO_000300: 3.237e1

QD
type: SiteQuality
SIO_000300: 1.106e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.169e0

DP
type: SiteQuality
SIO_000300: 1.439386e6

VQSLOD
type: SiteQuality
SIO_000300: -4.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.397e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.262148176195886e-4
allele num: 15846
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7956
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.151e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.065e0

FS
type: SiteQuality
SIO_000300: 8.989000000000001e0

MQ
type: SiteQuality
SIO_000300: 3.385e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

DP
type: SiteQuality
SIO_000300: 1.43872e6

QD
type: SiteQuality
SIO_000300: 9.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.645e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.201056930098487e-4
allele num: 8326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.338e0

MQ
type: SiteQuality
SIO_000300: 3.227e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.408e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.434886e6

VQSLOD
type: SiteQuality
SIO_000300: -3.963e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.894178557898725e-4
allele num: 15838
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.182e0

FS
type: SiteQuality
SIO_000300: 2.112e0

MQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

VQSLOD
type: SiteQuality
SIO_000300: -3.878e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

DP
type: SiteQuality
SIO_000300: 1.434369e6

MQ
type: SiteQuality
SIO_000300: 3.236e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.8433968356474e-4
allele num: 6194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15776
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 3.051157744855409e-4
allele num: 58994
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.791e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 1.144e0

DP
type: SiteQuality
SIO_000300: 1.423481e6

MQ
type: SiteQuality
SIO_000300: 3.204e1

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.135e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.703171304969854e-5
allele num: 58714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.21e-1

MQ
type: SiteQuality
SIO_000300: 3.368e1

FS
type: SiteQuality
SIO_000300: 8.417999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e0

DP
type: SiteQuality
SIO_000300: 1.408775e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ClippingRankSum
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SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.295e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 58610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8224
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.259128682951398e-4
allele num: 7942
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6128
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.536e1

QD
type: SiteQuality
SIO_000300: 1.243e1

BaseQRankSum
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SIO_000300: -2.054e0

ClippingRankSum
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SIO_000300: -7.72e-1

FS
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SIO_000300: 3.815e0

InbreedingCoeff
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SIO_000300: -2.6e-3

MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.404697e6

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.219512195121951e-4
allele num: 8200
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
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MQ
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -5.93e-1

MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58298
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.059448520111307e-4
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.278935925310142e-4
allele num: 15638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.394907e6

FS
type: SiteQuality
SIO_000300: 1.419e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 3.648e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 8
allele frequency: 1.013941698352345e-3
allele num: 7890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.719217412233951e-5
allele num: 58166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 3.515e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.859e0

FS
type: SiteQuality
SIO_000300: 5.835e0

DP
type: SiteQuality
SIO_000300: 1.389997e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.298e0

QD
type: SiteQuality
SIO_000300: 1.36e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.456261016831991e-5
allele num: 57866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 1.378703e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.892e0

FS
type: SiteQuality
SIO_000300: 3.558e0

QD
type: SiteQuality
SIO_000300: 7.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.366150323757736e-5
allele num: 55906
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15284
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.567e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

FS
type: SiteQuality
SIO_000300: 1.272e0

VQSLOD
type: SiteQuality
SIO_000300: -2.96e0

QD
type: SiteQuality
SIO_000300: 1.469e1

MQ
type: SiteQuality
SIO_000300: 3.436e1

DP
type: SiteQuality
SIO_000300: 1.309751e6

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 238
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GenotypeQuality
all individuals: 1001
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.239556939115326e-5
allele num: 55252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9100
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e0

MQ
type: SiteQuality
SIO_000300: 3.383e1

FS
type: SiteQuality
SIO_000300: 1.4889e1

QD
type: SiteQuality
SIO_000300: 1.067e1

VQSLOD
type: SiteQuality
SIO_000300: -5.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.81e-1

DP
type: SiteQuality
SIO_000300: 1.274403e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 107
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.423973964924969e-5
allele num: 55310
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.955696202531646e-4
allele num: 7584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.293084522502744e-4
allele num: 9110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.7422e1

VQSLOD
type: SiteQuality
SIO_000300: -1.279e1

DP
type: SiteQuality
SIO_000300: 1.273776e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.415e0

MQ
type: SiteQuality
SIO_000300: 2.683e1

MQRankSum
type: SiteQuality
SIO_000300: -2.024e0

QD
type: SiteQuality
SIO_000300: 2.64e0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.0e-4
allele num: 7500
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.124606387764283e-4
allele num: 8892
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.317409766454352e-4
allele num: 15072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5642
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 1.94300518134715e-3
allele num: 7720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.470101804549965e-4
allele num: 54418
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

BaseQRankSum
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SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 3.2074e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.215994e6

MQ
type: SiteQuality
SIO_000300: 3.554e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 3.36e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.718624025799516e-5
allele num: 14884
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7360
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7622
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.117069e6

MQ
type: SiteQuality
SIO_000300: 3.766e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.486e0

QD
type: SiteQuality
SIO_000300: 5.55e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1571
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variant carriers: 27

GenotypeQuality
all individuals: 135
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 4.155961916276258e-4
allele num: 52936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7324
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.560408260147163e-4
allele num: 8426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
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African
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allele frequency: 2.642706131078224e-4
allele num: 7568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.886e0

BaseQRankSum
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VQSLOD
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SIO_000300: -3.061e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

QD
type: SiteQuality
SIO_000300: 1.273e1

MQ
type: SiteQuality
SIO_000300: 3.698e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 52936
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.735821096591675e-5
allele num: 14846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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SIO_000300: 1.27e0

DP
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SIO_000300: 1.096052e6

QD
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.698e1

FS
type: SiteQuality
SIO_000300: 2.886e0

VQSLOD
type: SiteQuality
SIO_000300: -3.061e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 1.30890052356021e-3
allele num: 764
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.919827983412686e-5
allele num: 52088
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7478
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5420
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.358e0

VQSLOD
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QD
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DP
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SIO_000300: 1.053203e6

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 3.658e1

FS
type: SiteQuality
SIO_000300: 2.0241e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.912669222943892e-5
allele num: 51116
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.476e0

VQSLOD
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SIO_000300: -3.732e0

MQRankSum
type: SiteQuality
SIO_000300: -1.197e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

MQ
type: SiteQuality
SIO_000300: 3.435e1

DP
type: SiteQuality
SIO_000300: 1.017158e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49132
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.471453796350795e-4
allele num: 6796
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5180
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.751e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

MQ
type: SiteQuality
SIO_000300: 3.848e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.95e-1

FS
type: SiteQuality
SIO_000300: 1.468e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 9.73194e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
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allele num: 720
num of homozygotes: 0

East Asian
type: Population
allele count: 24
allele frequency: 3.525264394829612e-3
allele num: 6808
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African
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allele num: 7154
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.983240223463687e-5
allele num: 14320
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.037240761113148e-5
allele num: 49086
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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FS
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MQ
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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allele count: 0
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European (Finnish)
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

Latino
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num of homozygotes: 0

African
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allele frequency: 2.161828289067325e-3
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 660
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South Asian
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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SIO_000300: -3.091e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

MQ
type: SiteQuality
SIO_000300: 3.734e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

DP
type: SiteQuality
SIO_000300: 9.39444e5

QD
type: SiteQuality
SIO_000300: 5.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

GenotypeQuality
all individuals: 4269
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1237
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 8.75e1
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GenotypeQuality
all individuals: 2218
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4489
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 2.5e0
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GenotypeQuality
all individuals: 109
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5294
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.007793603869927e-4
allele num: 29768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1006
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.707092582566324e-4
allele num: 3694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3062
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.245e1

FS
type: SiteQuality
SIO_000300: 1.268e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.188e0

DP
type: SiteQuality
SIO_000300: 6.06027e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

MQ
type: SiteQuality
SIO_000300: 3.053e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 284
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 5768
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variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30526
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

VQSLOD
type: SiteQuality
SIO_000300: -3.331e0

MQ
type: SiteQuality
SIO_000300: 3.657e1

DP
type: SiteQuality
SIO_000300: 6.48568e5

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.501e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

GenotypeQuality
all individuals: 982
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 1040
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variant carriers: 0

GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 2

GenotypeQuality
all individuals: 1396
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variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 6520
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GenotypeQuality
all individuals: 356
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variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1261
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 3354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 4.524886877828054e-4
allele num: 4420
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 2.183406113537118e-3
allele num: 458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 3.40406218086917e-4
allele num: 35252
num of homozygotes: 1

South Asian
type: Population
allele count: 6
allele frequency: 9.377930603313535e-4
allele num: 6398
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.240694789081886e-3
allele num: 4836
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 3.348e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.22e-1

FS
type: SiteQuality
SIO_000300: 1.764e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

DP
type: SiteQuality
SIO_000300: 7.84846e5

QD
type: SiteQuality
SIO_000300: 1.722e1

VQSLOD
type: SiteQuality
SIO_000300: -4.701e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 272
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 1052
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GenotypeQuality
all individuals: 174
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variant carriers: 0

GenotypeQuality
all individuals: 2586
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2630
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 521
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GenotypeQuality
all individuals: 1156
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GenotypeQuality
all individuals: 1008
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.575713010137087e-4
allele num: 38078
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.0755500207555e-4
allele num: 4818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.339e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.97e-1

FS
type: SiteQuality
SIO_000300: 3.965e0

QD
type: SiteQuality
SIO_000300: 5.16e0

DP
type: SiteQuality
SIO_000300: 8.42502e5

MQ
type: SiteQuality
SIO_000300: 3.281e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.354e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.8e-3

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 797
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variant carriers: 3

GenotypeQuality
all individuals: 14594
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variant carriers: 0

GenotypeQuality
all individuals: 675
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GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
all individuals: 1632
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variant carriers: 2

GenotypeQuality
all individuals: 757
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GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 280
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variant carriers: 4

GenotypeQuality
all individuals: 24085
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variant carriers: 2

GenotypeQuality
all individuals: 577
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variant carriers: 4

GenotypeQuality
all individuals: 550
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variant carriers: 1

GenotypeQuality
all individuals: 363
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variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 2

GenotypeQuality
all individuals: 242
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variant carriers: 2

GenotypeQuality
all individuals: 3029
bin: 6.75e1
variant carriers: 3

African
type: Population
allele count: 5
allele frequency: 9.154155986818016e-4
allele num: 5462
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 2.965599051008304e-3
allele num: 6744
num of homozygotes: 1

South Asian
type: Population
allele count: 9
allele frequency: 1.108647450110865e-3
allele num: 8118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.149330587023687e-4
allele num: 1942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 2.289377289377289e-3
allele num: 4368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 200
allele frequency: 4.625774817281895e-3
allele num: 43236
num of homozygotes: 4

VQSLOD
type: SiteQuality
SIO_000300: -3.788e0

QD
type: SiteQuality
SIO_000300: 1.099e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 9.36627e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.53e-1

FS
type: SiteQuality
SIO_000300: 1.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 3.33e1

GenotypeQuality
all individuals: 5381
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.75e1
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GenotypeQuality
all individuals: 540
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GenotypeQuality
all individuals: 26167
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variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
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variant carriers: 0

GenotypeQuality
all individuals: 706
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variant carriers: 0

GenotypeQuality
all individuals: 3267
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variant carriers: 0

GenotypeQuality
all individuals: 511
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GenotypeQuality
all individuals: 253
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variant carriers: 1

GenotypeQuality
all individuals: 235
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GenotypeQuality
all individuals: 613
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GenotypeQuality
all individuals: 202
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GenotypeQuality
all individuals: 1415
bin: 2.75e1
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GenotypeQuality
all individuals: 1373
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 194
bin: 5.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 8.698677800974252e-4
allele num: 5748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2150
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1353e2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.299e1

MQRankSum
type: SiteQuality
SIO_000300: -3.055e0

DP
type: SiteQuality
SIO_000300: 9.76835e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

MQ
type: SiteQuality
SIO_000300: 3.492e1

QD
type: SiteQuality
SIO_000300: 7.9e-1

GenotypeQuality
all individuals: 5015
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 27774
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 3510
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
all individuals: 1112
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GenotypeQuality
all individuals: 233
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GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 249
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variant carriers: 0

GenotypeQuality
all individuals: 264
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variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 6
allele frequency: 2.599653379549394e-3
allele num: 2308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.220121539500338e-5
allele num: 47392
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.675603217158177e-4
allele num: 5968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.611e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 2.357e0

QD
type: SiteQuality
SIO_000300: 1.075e1

DP
type: SiteQuality
SIO_000300: 1.015427e6

MQ
type: SiteQuality
SIO_000300: 2.9e1

GenotypeQuality
all individuals: 4592
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 375
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
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GenotypeQuality
all individuals: 141
bin: 5.25e1
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GenotypeQuality
all individuals: 1006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3904
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 3.75e1
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GenotypeQuality
all individuals: 11319
bin: 2.25e1
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GenotypeQuality
all individuals: 384
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
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GenotypeQuality
all individuals: 669
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29564
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.042527388123055e-5
allele num: 49474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.161e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.439e0

MQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.45e-1

DP
type: SiteQuality
SIO_000300: 1.052539e6

MQ
type: SiteQuality
SIO_000300: 3.719e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 294
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4361
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4010
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10869
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.923976608187135e-4
allele num: 10260
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

FS
type: SiteQuality
SIO_000300: 1.589e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

DP
type: SiteQuality
SIO_000300: 1.07007e6

MQRankSum
type: SiteQuality
SIO_000300: 4.01e0

QD
type: SiteQuality
SIO_000300: 3.277e1

VQSLOD
type: SiteQuality
SIO_000300: -5.835e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQ
type: SiteQuality
SIO_000300: 3.664e1

GenotypeQuality
all individuals: 3782
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 32724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4252
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 323
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9551
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1126
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 9.75e1
variant carriers: 74

GenotypeQuality
all individuals: 916
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 466
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 797
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 348
bin: 8.75e1
variant carriers: 1

Other
type: Population
allele count: 3
allele frequency: 4.477611940298508e-3
allele num: 670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 74
allele frequency: 1.359294636296841e-2
allele num: 5444
num of homozygotes: 8

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2986
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 4.550108065066545e-4
allele num: 52746
num of homozygotes: 2

VQSLOD
type: SiteQuality
SIO_000300: -3.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

QD
type: SiteQuality
SIO_000300: 1.786e1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e0

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQ
type: SiteQuality
SIO_000300: 3.799e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

DP
type: SiteQuality
SIO_000300: 1.120943e6

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33638
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3472
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9003
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4330
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.862336114421931e-5
allele num: 53696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3066
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.139005e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: -5.18e0

MQ
type: SiteQuality
SIO_000300: 2.825e1

MQRankSum
type: SiteQuality
SIO_000300: -2.072e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.19e-1

QD
type: SiteQuality
SIO_000300: 7.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7766
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9444
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.988643156007172e-4
allele num: 3346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.164e0

VQSLOD
type: SiteQuality
SIO_000300: -4.303e0

MQ
type: SiteQuality
SIO_000300: 3.515e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

FS
type: SiteQuality
SIO_000300: 5.902e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

QD
type: SiteQuality
SIO_000300: 3.077e1

DP
type: SiteQuality
SIO_000300: 1.176907e6

GenotypeQuality
all individuals: 6655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 546
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 444
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2729
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 210
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35974
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 320
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1667
bin: 9.75e1
variant carriers: 9

African
type: Population
allele count: 2
allele frequency: 2.704164413196323e-4
allele num: 7396
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.790178571428571e-4
allele num: 3584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.839448102853559e-5
allele num: 12756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.408996442283983e-4
allele num: 56778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

FS
type: SiteQuality
SIO_000300: 1.0354e1

MQ
type: SiteQuality
SIO_000300: 3.361e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.046e0

DP
type: SiteQuality
SIO_000300: 1.206351e6

VQSLOD
type: SiteQuality
SIO_000300: -4.582e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 1.015e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.11e-1

GenotypeQuality
all individuals: 435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57608
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.832460732984293e-3
allele num: 3820
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

DP
type: SiteQuality
SIO_000300: 1.215566e6

FS
type: SiteQuality
SIO_000300: 4.533e0

MQ
type: SiteQuality
SIO_000300: 3.567e1

QD
type: SiteQuality
SIO_000300: 1.439e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.82e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.074e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

GenotypeQuality
all individuals: 151
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6455
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.471740036106096e-5
allele num: 57608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.439e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

FS
type: SiteQuality
SIO_000300: 4.533e0

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.82e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.074e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

MQ
type: SiteQuality
SIO_000300: 3.567e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 1.215566e6

GenotypeQuality
all individuals: 2553
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 427
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 427
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6047
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36679
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4780
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1373
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.554672655035412e-4
allele num: 57890
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.945291951604419e-4
allele num: 7604
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.527650473571647e-4
allele num: 13092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.167958656330749e-4
allele num: 3870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.138e1

FS
type: SiteQuality
SIO_000300: 2.572e1

MQ
type: SiteQuality
SIO_000300: 3.4e1

DP
type: SiteQuality
SIO_000300: 1.227437e6

VQSLOD
type: SiteQuality
SIO_000300: -7.387e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 444
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4874
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36935
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.228163992869875e-4
allele num: 58344
num of homozygotes: 1

DP
type: SiteQuality
SIO_000300: 1.231144e6

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 3.67e1

QD
type: SiteQuality
SIO_000300: 1.344e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.966e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

FS
type: SiteQuality
SIO_000300: 5.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20086
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variant carriers: 1

GenotypeQuality
all individuals: 1004
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.701201047939846e-5
allele num: 58782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.468e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

MQRankSum
type: SiteQuality
SIO_000300: -5.213e0

QD
type: SiteQuality
SIO_000300: 9.19e0

FS
type: SiteQuality
SIO_000300: 6.6318e1

DP
type: SiteQuality
SIO_000300: 2.507285e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.901e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.114e-1

GenotypeQuality
all individuals: 2767
bin: 6.75e1
variant carriers: 994

GenotypeQuality
all individuals: 1222
bin: 4.75e1
variant carriers: 1092

GenotypeQuality
all individuals: 1257
bin: 3.25e1
variant carriers: 1120

GenotypeQuality
all individuals: 1444
bin: 2.5e0
variant carriers: 544

GenotypeQuality
all individuals: 881
bin: 5.75e1
variant carriers: 737

GenotypeQuality
all individuals: 1370
bin: 3.75e1
variant carriers: 1224

GenotypeQuality
all individuals: 1222
bin: 5.25e1
variant carriers: 1080

GenotypeQuality
all individuals: 975
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variant carriers: 666

GenotypeQuality
all individuals: 1004
bin: 4.25e1
variant carriers: 877

GenotypeQuality
all individuals: 1744
bin: 7.5e0
variant carriers: 899

GenotypeQuality
all individuals: 1016
bin: 1.25e1
variant carriers: 817

GenotypeQuality
all individuals: 1754
bin: 2.25e1
variant carriers: 1165

GenotypeQuality
all individuals: 15843
bin: 6.25e1
variant carriers: 1024

GenotypeQuality
all individuals: 1032
bin: 8.25e1
variant carriers: 874

GenotypeQuality
all individuals: 867
bin: 9.25e1
variant carriers: 777

GenotypeQuality
all individuals: 1056
bin: 2.75e1
variant carriers: 903

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 618

GenotypeQuality
all individuals: 1176
bin: 7.75e1
variant carriers: 853

GenotypeQuality
all individuals: 20086
bin: 9.75e1
variant carriers: 19507

African
type: Population
allele count: 3293
allele frequency: 4.103938185443669e-1
allele num: 8024
num of homozygotes: 959

South Asian
type: Population
allele count: 5761
allele frequency: 4.051336146272855e-1
allele num: 14220
num of homozygotes: 1491

European (Finnish)
type: Population
allele count: 2682
allele frequency: 4.324411480167688e-1
allele num: 6202
num of homozygotes: 680

Latino
type: Population
allele count: 3995
allele frequency: 3.928220255653884e-1
allele num: 10170
num of homozygotes: 925

European (Non-Finnish)
type: Population
allele count: 24290
allele frequency: 4.132217345445885e-1
allele num: 58782
num of homozygotes: 5684

East Asian
type: Population
allele count: 3140
allele frequency: 6.264964086193137e-1
allele num: 5012
num of homozygotes: 1340

Other
type: Population
allele count: 342
allele frequency: 4.285714285714285e-1
allele num: 798
num of homozygotes: 91

FS
type: SiteQuality
SIO_000300: 6.6318e1

QD
type: SiteQuality
SIO_000300: 9.19e0

MQRankSum
type: SiteQuality
SIO_000300: -5.213e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.114e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

VQSLOD
type: SiteQuality
SIO_000300: -9.901e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.57e-1

MQ
type: SiteQuality
SIO_000300: 3.468e1

DP
type: SiteQuality
SIO_000300: 2.507285e6

GenotypeQuality
all individuals: 110
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 547
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variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
all individuals: 1054
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variant carriers: 0

GenotypeQuality
all individuals: 983
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variant carriers: 0

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 574
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variant carriers: 0

GenotypeQuality
all individuals: 1239
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variant carriers: 0

GenotypeQuality
all individuals: 530
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variant carriers: 0

GenotypeQuality
all individuals: 1841
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GenotypeQuality
all individuals: 605
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GenotypeQuality
all individuals: 1818
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variant carriers: 0

GenotypeQuality
all individuals: 1486
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variant carriers: 0

GenotypeQuality
all individuals: 1184
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variant carriers: 0

GenotypeQuality
all individuals: 1016
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variant carriers: 0

GenotypeQuality
all individuals: 22578
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variant carriers: 1

GenotypeQuality
all individuals: 838
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variant carriers: 0

GenotypeQuality
all individuals: 17693
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613059328322096e-5
allele num: 61994
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 6.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.03e0

MQ
type: SiteQuality
SIO_000300: 3.6e1

VQSLOD
type: SiteQuality
SIO_000300: -9.596e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.358e0

DP
type: SiteQuality
SIO_000300: 2.368067e6

FS
type: SiteQuality
SIO_000300: 2.4073e1

MQRankSum
type: SiteQuality
SIO_000300: -6.447e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 981
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GenotypeQuality
all individuals: 22579
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613319566339701e-5
allele num: 61984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.29e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 3.797e1

DP
type: SiteQuality
SIO_000300: 2.368305e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 7.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1012
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GenotypeQuality
all individuals: 22577
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14812
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.803101334294987e-4
allele num: 5546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.5779e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 4.12e0

MQ
type: SiteQuality
SIO_000300: 3.52e1

MQRankSum
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SIO_000300: -1.452e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
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SIO_000300: -7.0e-4

BaseQRankSum
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SIO_000300: 2.61e0

VQSLOD
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SIO_000300: -9.773999999999999e0

DP
type: SiteQuality
SIO_000300: 2.368693e6