3-38627151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627151
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627151
    reference: chr 3
allele count: 6
allele frequency: 8.130081300813009e-3
allele num: 738
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+31T>C
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

3-38627151-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627151
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627152
    reference: chr 3
allele count: 1
allele frequency: 1.355013550135501e-3
allele num: 738
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+30dupA
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5444
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26523
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

3-38627152-T-TGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627152
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627154
    reference: chr 3
allele count: 41
allele frequency: 4.343220338983051e-2
allele num: 944
alternate allele: TGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+28_2787+29dupCC
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

3-38627154-G-GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627154
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627184
    reference: chr 3
allele count: 1
allele frequency: 1.645494635687488e-5
allele num: 60772
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12460
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8874
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

3-38627155-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627155
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627155
    reference: chr 3
allele count: 13
allele frequency: 1.473388339831354e-4
allele num: 88232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+27A>C
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15110
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13536
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 10953
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

3-38627157-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627157
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627157
    reference: chr 3
allele count: 1
allele frequency: 1.043427450489367e-5
allele num: 95838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+25A>C
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8052
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15410
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

3-38627158-G-GTGTGTGTGTGTGTGTGTGTGTGTGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627158
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627184
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 97920
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5374
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

3-38627158-G-GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627158
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627188
    reference: chr 3
allele count: 1
allele frequency: 1.021241830065359e-5
allele num: 97920
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15616
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4396
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

3-38627158-G-GTGTGTGTGTGTGTGTGTGTGTGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627158
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627182
    reference: chr 3
allele count: 1
allele frequency: 1.021241830065359e-5
allele num: 97920
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15616
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7631
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

3-38627160-G-GTGTGTGTGTGTGTGTGTGTGTGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627160
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627184
    reference: chr 3
allele count: 3
allele frequency: 2.964661238042533e-5
allele num: 101192
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13730
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4937
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5356
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

3-38627162-G-GTGTGTGTGTGTGTGTGTGTGTGTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627162
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627186
    reference: chr 3
allele count: 1
allele frequency: 9.650646593321753e-6
allele num: 103620
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 16437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18081
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

3-38627162-G-GTGTGTGTGTGTGTGTGTGTGTGTGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627162
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627188
    reference: chr 3
allele count: 1
allele frequency: 9.650646593321753e-6
allele num: 103620
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16437
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD

3-38627164-G-GTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627181
    reference: chr 3
allele count: 253
allele frequency: 2.467281699206179e-3
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 1.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 8239
  bin: 6.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.75e1
  variant carriers: 10
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

3-38627164-G-GTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627183
    reference: chr 3
allele count: 747
allele frequency: 7.284819878683856e-3
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 7.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 3.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 13
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

3-38627164-G-GTGTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627185
    reference: chr 3
allele count: 2300
allele frequency: 2.242983362914708e-2
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 716
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 639
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 1050
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 3.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 7.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 10329
  bin: 2.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.75e1
  variant carriers: 66
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

3-38627164-G-GTGTGTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627187
    reference: chr 3
allele count: 4673
allele frequency: 4.557157067348013e-2
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 1903
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 718
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 1607
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 865
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 3.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 4377
  bin: 3.25e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.5e0
  variant carriers: 90
num of homozygotes: 5
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

3-38627164-G-GTGTGTGTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627189
    reference: chr 3
allele count: 5537
allele frequency: 5.399738643677712e-2
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 1898
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 682
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 1868
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 1066
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 1.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 9.25e1
  variant carriers: 154
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 44
num of homozygotes: 4
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-38627164-G-GTGTGTGTGTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627164
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627191
    reference: chr 3
allele count: 1114
allele frequency: 1.08638411577695e-2
allele num: 102542
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 1.25e1
  variant carriers: 292
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 1.75e1
  variant carriers: 385
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 2.25e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 7.5e0
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 1.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 1.75e1
  variant carriers: 16
num of homozygotes: 6
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

3-38627165-G-GTGTGTGTGTGTGTGTGTGTGTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627165
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627188
    reference: chr 3
allele count: 1
allele frequency: 1.869857890800299e-4
allele num: 5348
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12889
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

3-38627165-G-GTGTGTGTGTGTGTGTGTGTGTGTGTGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627165
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627192
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 5348
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTGC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

3-38627165-G-GTGTGTGTGTGTGTGTGTGTGTGTGTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627165
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627192
    reference: chr 3
allele count: 1
allele frequency: 1.869857890800299e-4
allele num: 5348
alternate allele: GTGTGTGTGTGTGTGTGTGTGTGTGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12889
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9898
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum

3-38627176-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627176
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627176
    reference: chr 3
allele count: 1
allele frequency: 6.425909266161162e-5
allele num: 15562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2787+6T>C
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: splice region
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2787+6T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

3-38627188-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627188
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627188
    reference: chr 3
allele count: 1
allele frequency: 8.571771442286263e-6
allele num: 116662
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2781C>G
  hgvsp: ENSP00000328968.4:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2781C>G
  hgvsp: ENSP00000398962.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2781C>G
  hgvsp: ENSP00000410257.1:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2781C>G
  hgvsp: ENSP00000397915.1:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2781C>G
  hgvsp: ENSP00000416634.1:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2781C>G
  hgvsp: ENSP00000399524.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2781C>G
  hgvsp: ENSP00000403355.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2781C>G
  hgvsp: ENSP00000388797.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2781C>G
  hgvsp: ENSP00000398266.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2781C>G
  hgvsp: ENSP00000413996.2:p.Asn927Lys
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10706
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn927Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

3-38627197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627197
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627197
    reference: chr 3
allele count: 1
allele frequency: 8.826436943934473e-6
allele num: 113296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2772C>T
  hgvsp: ENST00000443581.1:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2772C>T
  hgvsp: ENST00000414099.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2772C>T
  hgvsp: ENST00000449557.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2772C>T
  hgvsp: ENST00000450102.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2772C>T
  hgvsp: ENST00000413689.1:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2772C>T
  hgvsp: ENST00000333535.4:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2772C>T
  hgvsp: ENST00000423572.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2772C>T
  hgvsp: ENST00000451551.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2772C>T
  hgvsp: ENST00000425664.1:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2772C>T
  hgvsp: ENST00000455624.2:c.2772C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val924Val
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

3-38627199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627199
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627199
    reference: chr 3
allele count: 16
allele frequency: 1.373744311839959e-4
allele num: 116470
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2770G>A
  hgvsp: ENSP00000397915.1:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2770G>A
  hgvsp: ENSP00000398962.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2770G>A
  hgvsp: ENSP00000403355.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2770G>A
  hgvsp: ENSP00000410257.1:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2770G>A
  hgvsp: ENSP00000416634.1:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2770G>A
  hgvsp: ENSP00000399524.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2770G>A
  hgvsp: ENSP00000328968.4:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2770G>A
  hgvsp: ENSP00000398266.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2770G>A
  hgvsp: ENSP00000413996.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance&benign
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2770G>A
  hgvsp: ENSP00000388797.2:p.Val924Ile
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23996
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11919
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val924Ile
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

3-38627224-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627224
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627224
    reference: chr 3
allele count: 1
allele frequency: 8.28225940036442e-6
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2745C>T
  hgvsp: ENST00000443581.1:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2745C>T
  hgvsp: ENST00000423572.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2745C>T
  hgvsp: ENST00000449557.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2745C>T
  hgvsp: ENST00000414099.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2745C>T
  hgvsp: ENST00000425664.1:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2745C>T
  hgvsp: ENST00000333535.4:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2745C>T
  hgvsp: ENST00000413689.1:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2745C>T
  hgvsp: ENST00000450102.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2745C>T
  hgvsp: ENST00000455624.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2745C>T
  hgvsp: ENST00000451551.2:c.2745C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys915Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

3-38627239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627239
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627239
    reference: chr 3
allele count: 6
allele frequency: 4.962697060429108e-5
allele num: 120902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2730G>A
  hgvsp: ENST00000443581.1:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2730G>A
  hgvsp: ENST00000455624.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2730G>A
  hgvsp: ENST00000450102.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2730G>A
  hgvsp: ENST00000413689.1:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2730G>A
  hgvsp: ENST00000414099.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2730G>A
  hgvsp: ENST00000451551.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2730G>A
  hgvsp: ENST00000423572.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2730G>A
  hgvsp: ENST00000425664.1:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2730G>A
  hgvsp: ENST00000449557.2:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2730G>A
  hgvsp: ENST00000333535.4:c.2730G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser910Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

3-38627251-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627251
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627251
    reference: chr 3
allele count: 1
allele frequency: 8.26541913940456e-6
allele num: 120986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2718C>T
  hgvsp: ENST00000455624.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2718C>T
  hgvsp: ENST00000413689.1:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2718C>T
  hgvsp: ENST00000333535.4:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2718C>T
  hgvsp: ENST00000443581.1:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2718C>T
  hgvsp: ENST00000451551.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2718C>T
  hgvsp: ENST00000450102.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2718C>T
  hgvsp: ENST00000414099.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2718C>T
  hgvsp: ENST00000423572.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2718C>T
  hgvsp: ENST00000425664.1:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2718C>T
  hgvsp: ENST00000449557.2:c.2718C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys906Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

3-38627261-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627261
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627260
    reference: chr 3
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2707delA
  hgvsp: ENSP00000398962.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2707delA
  hgvsp: ENSP00000397915.1:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2707delA
  hgvsp: ENSP00000403355.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2707delA
  hgvsp: ENSP00000410257.1:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2707delA
  hgvsp: ENSP00000328968.4:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2707delA
  hgvsp: ENSP00000416634.1:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2707delA
  hgvsp: ENSP00000398266.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2707delA
  hgvsp: ENSP00000388797.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2707delA
  hgvsp: ENSP00000413996.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2707delA
  hgvsp: ENSP00000399524.2:p.Met903CysfsTer29
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28610
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met903CysfsTer29
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: AT
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

3-38627263-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627263
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627263
    reference: chr 3
allele count: 1
allele frequency: 8.262687356435807e-6
allele num: 121026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2706C>T
  hgvsp: ENST00000425664.1:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2706C>T
  hgvsp: ENST00000450102.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2706C>T
  hgvsp: ENST00000449557.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2706C>T
  hgvsp: ENST00000333535.4:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2706C>T
  hgvsp: ENST00000455624.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2706C>T
  hgvsp: ENST00000413689.1:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2706C>T
  hgvsp: ENST00000451551.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2706C>T
  hgvsp: ENST00000414099.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2706C>T
  hgvsp: ENST00000443581.1:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2706C>T
  hgvsp: ENST00000423572.2:c.2706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr902Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

3-38627263-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627263
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627263
    reference: chr 3
allele count: 1
allele frequency: 8.262687356435807e-6
allele num: 121026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2706C>A
  hgvsp: ENST00000449557.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2706C>A
  hgvsp: ENST00000455624.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2706C>A
  hgvsp: ENST00000425664.1:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2706C>A
  hgvsp: ENST00000450102.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2706C>A
  hgvsp: ENST00000423572.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2706C>A
  hgvsp: ENST00000413689.1:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2706C>A
  hgvsp: ENST00000443581.1:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2706C>A
  hgvsp: ENST00000414099.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2706C>A
  hgvsp: ENST00000451551.2:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2706C>A
  hgvsp: ENST00000333535.4:c.2706C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr902Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

3-38627269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627269
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627269
    reference: chr 3
allele count: 3
allele frequency: 2.47843759294141e-5
allele num: 121044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2700C>T
  hgvsp: ENST00000414099.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2700C>T
  hgvsp: ENST00000333535.4:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2700C>T
  hgvsp: ENST00000413689.1:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2700C>T
  hgvsp: ENST00000423572.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2700C>T
  hgvsp: ENST00000451551.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2700C>T
  hgvsp: ENST00000449557.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2700C>T
  hgvsp: ENST00000443581.1:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2700C>T
  hgvsp: ENST00000425664.1:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2700C>T
  hgvsp: ENST00000455624.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2700C>T
  hgvsp: ENST00000450102.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46315
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile900Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

3-38627278-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627278
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627278
    reference: chr 3
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2691A>G
  hgvsp: ENST00000413689.1:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2691A>G
  hgvsp: ENST00000451551.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2691A>G
  hgvsp: ENST00000333535.4:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2691A>G
  hgvsp: ENST00000449557.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2691A>G
  hgvsp: ENST00000455624.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2691A>G
  hgvsp: ENST00000423572.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2691A>G
  hgvsp: ENST00000443581.1:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2691A>G
  hgvsp: ENST00000450102.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2691A>G
  hgvsp: ENST00000425664.1:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2691A>G
  hgvsp: ENST00000414099.2:c.2691A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly897Gly
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

3-38627286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627286
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627286
    reference: chr 3
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2683C>T
  hgvsp: ENSP00000399524.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2683C>T
  hgvsp: ENSP00000403355.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2683C>T
  hgvsp: ENSP00000398962.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2683C>T
  hgvsp: ENSP00000397915.1:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2683C>T
  hgvsp: ENSP00000416634.1:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2683C>T
  hgvsp: ENSP00000398266.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2683C>T
  hgvsp: ENSP00000410257.1:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2683C>T
  hgvsp: ENSP00000413996.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2683C>T
  hgvsp: ENSP00000388797.2:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2683C>T
  hgvsp: ENSP00000328968.4:p.Leu895Phe
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7637
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu895Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

3-38627287-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627287
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627287
    reference: chr 3
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2682C>G
  hgvsp: ENSP00000399524.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2682C>G
  hgvsp: ENSP00000410257.1:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2682C>G
  hgvsp: ENSP00000328968.4:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2682C>G
  hgvsp: ENSP00000398962.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2682C>G
  hgvsp: ENSP00000413996.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2682C>G
  hgvsp: ENSP00000397915.1:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2682C>G
  hgvsp: ENSP00000388797.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2682C>G
  hgvsp: ENSP00000403355.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2682C>G
  hgvsp: ENSP00000416634.1:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2682C>G
  hgvsp: ENSP00000398266.2:p.Ile894Met
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile894Met
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

3-38627292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627292
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627292
    reference: chr 3
allele count: 1
allele frequency: 8.258865892535638e-6
allele num: 121082
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2677C>T
  hgvsp: ENSP00000397915.1:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2677C>T
  hgvsp: ENSP00000416634.1:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2677C>T
  hgvsp: ENSP00000398962.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2677C>T
  hgvsp: ENSP00000398266.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2677C>T
  hgvsp: ENSP00000403355.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2677C>T
  hgvsp: ENSP00000410257.1:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2677C>T
  hgvsp: ENSP00000413996.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2677C>T
  hgvsp: ENSP00000328968.4:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2677C>T
  hgvsp: ENSP00000388797.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2677C>T
  hgvsp: ENSP00000399524.2:p.Arg893Cys
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28643
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg893Cys
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

3-38627297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627297
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627297
    reference: chr 3
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2672T>C
  hgvsp: ENSP00000413996.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2672T>C
  hgvsp: ENSP00000399524.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2672T>C
  hgvsp: ENSP00000416634.1:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2672T>C
  hgvsp: ENSP00000397915.1:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2672T>C
  hgvsp: ENSP00000398266.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2672T>C
  hgvsp: ENSP00000388797.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2672T>C
  hgvsp: ENSP00000398962.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2672T>C
  hgvsp: ENSP00000328968.4:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2672T>C
  hgvsp: ENSP00000403355.2:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2672T>C
  hgvsp: ENSP00000410257.1:p.Ile891Thr
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile891Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

3-38627297-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627297
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627297
    reference: chr 3
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2672T>A
  hgvsp: ENSP00000397915.1:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2672T>A
  hgvsp: ENSP00000328968.4:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2672T>A
  hgvsp: ENSP00000399524.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2672T>A
  hgvsp: ENSP00000403355.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2672T>A
  hgvsp: ENSP00000388797.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2672T>A
  hgvsp: ENSP00000398266.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2672T>A
  hgvsp: ENSP00000398962.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2672T>A
  hgvsp: ENSP00000410257.1:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2672T>A
  hgvsp: ENSP00000416634.1:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2672T>A
  hgvsp: ENSP00000413996.2:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile891Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

3-38627302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627302
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627302
    reference: chr 3
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2667C>T
  hgvsp: ENST00000425664.1:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2667C>T
  hgvsp: ENST00000413689.1:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2667C>T
  hgvsp: ENST00000423572.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2667C>T
  hgvsp: ENST00000450102.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2667C>T
  hgvsp: ENST00000451551.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2667C>T
  hgvsp: ENST00000333535.4:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2667C>T
  hgvsp: ENST00000443581.1:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2667C>T
  hgvsp: ENST00000414099.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2667C>T
  hgvsp: ENST00000449557.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2667C>T
  hgvsp: ENST00000455624.2:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu889Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

3-38627335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627335
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627335
    reference: chr 3
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2634C>T
  hgvsp: ENST00000333535.4:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2634C>T
  hgvsp: ENST00000451551.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2634C>T
  hgvsp: ENST00000414099.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2634C>T
  hgvsp: ENST00000450102.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2634C>T
  hgvsp: ENST00000425664.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2634C>T
  hgvsp: ENST00000423572.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2634C>T
  hgvsp: ENST00000449557.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2634C>T
  hgvsp: ENST00000443581.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2634C>T
  hgvsp: ENST00000455624.2:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2634C>T
  hgvsp: ENST00000413689.1:c.2634C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11873
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg878Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD

3-38627347-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627347
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627347
    reference: chr 3
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2622C>G
  hgvsp: ENST00000451551.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2622C>G
  hgvsp: ENST00000413689.1:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2622C>G
  hgvsp: ENST00000423572.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2622C>G
  hgvsp: ENST00000443581.1:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2622C>G
  hgvsp: ENST00000449557.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2622C>G
  hgvsp: ENST00000450102.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2622C>G
  hgvsp: ENST00000455624.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2622C>G
  hgvsp: ENST00000425664.1:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2622C>G
  hgvsp: ENST00000333535.4:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2622C>G
  hgvsp: ENST00000414099.2:c.2622C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly874Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

3-38627348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627348
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627348
    reference: chr 3
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2621G>A
  hgvsp: ENSP00000397915.1:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2621G>A
  hgvsp: ENSP00000403355.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2621G>A
  hgvsp: ENSP00000328968.4:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2621G>A
  hgvsp: ENSP00000398962.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2621G>A
  hgvsp: ENSP00000416634.1:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2621G>A
  hgvsp: ENSP00000413996.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2621G>A
  hgvsp: ENSP00000398266.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2621G>A
  hgvsp: ENSP00000410257.1:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2621G>A
  hgvsp: ENSP00000399524.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2621G>A
  hgvsp: ENSP00000388797.2:p.Gly874Asp
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly874Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/3-38627352-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627352
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627352
    reference: chr 3
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2617T>G
  hgvsp: ENSP00000397915.1:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2617T>G
  hgvsp: ENSP00000328968.4:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2617T>G
  hgvsp: ENSP00000399524.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2617T>G
  hgvsp: ENSP00000416634.1:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2617T>G
  hgvsp: ENSP00000398266.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2617T>G
  hgvsp: ENSP00000413996.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2617T>G
  hgvsp: ENSP00000388797.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2617T>G
  hgvsp: ENSP00000398962.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2617T>G
  hgvsp: ENSP00000403355.2:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2617T>G
  hgvsp: ENSP00000410257.1:p.Ser873Ala
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser873Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

3-38627355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627355
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627355
    reference: chr 3
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2614G>A
  hgvsp: ENSP00000403355.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2614G>A
  hgvsp: ENSP00000398962.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2614G>A
  hgvsp: ENSP00000399524.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2614G>A
  hgvsp: ENSP00000410257.1:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2614G>A
  hgvsp: ENSP00000388797.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2614G>A
  hgvsp: ENSP00000398266.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2614G>A
  hgvsp: ENSP00000397915.1:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2614G>A
  hgvsp: ENSP00000328968.4:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2614G>A
  hgvsp: ENSP00000413996.2:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2614G>A
  hgvsp: ENSP00000416634.1:p.Asp872Asn
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp872Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

3-38627362-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627362
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627362
    reference: chr 3
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2607G>C
  hgvsp: ENSP00000388797.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2607G>C
  hgvsp: ENSP00000413996.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2607G>C
  hgvsp: ENSP00000416634.1:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2607G>C
  hgvsp: ENSP00000397915.1:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2607G>C
  hgvsp: ENSP00000410257.1:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2607G>C
  hgvsp: ENSP00000399524.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2607G>C
  hgvsp: ENSP00000328968.4:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2607G>C
  hgvsp: ENSP00000403355.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2607G>C
  hgvsp: ENSP00000398962.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2607G>C
  hgvsp: ENSP00000398266.2:p.Arg869Ser
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg869Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

3-38627371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627371
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627371
    reference: chr 3
allele count: 1
allele frequency: 8.25082508250825e-6
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2598G>A
  hgvsp: ENST00000413689.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2598G>A
  hgvsp: ENST00000423572.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2598G>A
  hgvsp: ENST00000425664.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2598G>A
  hgvsp: ENST00000443581.1:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2598G>A
  hgvsp: ENST00000449557.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2598G>A
  hgvsp: ENST00000450102.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2598G>A
  hgvsp: ENST00000333535.4:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2598G>A
  hgvsp: ENST00000451551.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2598G>A
  hgvsp: ENST00000455624.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2598G>A
  hgvsp: ENST00000414099.2:c.2598G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28676
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser866Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

3-38627372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627372
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627372
    reference: chr 3
allele count: 2
allele frequency: 1.650110557407346e-5
allele num: 121204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2597C>T
  hgvsp: ENSP00000328968.4:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2597C>T
  hgvsp: ENSP00000410257.1:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2597C>T
  hgvsp: ENSP00000403355.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2597C>T
  hgvsp: ENSP00000397915.1:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2597C>T
  hgvsp: ENSP00000398962.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2597C>T
  hgvsp: ENSP00000399524.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2597C>T
  hgvsp: ENSP00000388797.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2597C>T
  hgvsp: ENSP00000416634.1:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2597C>T
  hgvsp: ENSP00000413996.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2597C>T
  hgvsp: ENSP00000398266.2:p.Ser866Leu
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser866Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

3-38627373-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627373
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627373
    reference: chr 3
allele count: 1
allele frequency: 8.250688932525866e-6
allele num: 121202
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2596T>C
  hgvsp: ENSP00000398266.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2596T>C
  hgvsp: ENSP00000399524.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2596T>C
  hgvsp: ENSP00000398962.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2596T>C
  hgvsp: ENSP00000397915.1:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2596T>C
  hgvsp: ENSP00000413996.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2596T>C
  hgvsp: ENSP00000410257.1:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2596T>C
  hgvsp: ENSP00000416634.1:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2596T>C
  hgvsp: ENSP00000403355.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2596T>C
  hgvsp: ENSP00000328968.4:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2596T>C
  hgvsp: ENSP00000388797.2:p.Ser866Pro
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser866Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

3-38627397-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627397
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627397
    reference: chr 3
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2572A>T
  hgvsp: ENSP00000398266.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2572A>T
  hgvsp: ENSP00000398962.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2572A>T
  hgvsp: ENSP00000410257.1:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2572A>T
  hgvsp: ENSP00000416634.1:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2572A>T
  hgvsp: ENSP00000397915.1:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2572A>T
  hgvsp: ENSP00000388797.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2572A>T
  hgvsp: ENSP00000399524.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2572A>T
  hgvsp: ENSP00000403355.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2572A>T
  hgvsp: ENSP00000328968.4:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2572A>T
  hgvsp: ENSP00000413996.2:p.Met858Leu
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met858Leu
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

3-38627399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627399
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627399
    reference: chr 3
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2570G>A
  hgvsp: ENSP00000399524.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2570G>A
  hgvsp: ENSP00000397915.1:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2570G>A
  hgvsp: ENSP00000416634.1:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2570G>A
  hgvsp: ENSP00000398266.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2570G>A
  hgvsp: ENSP00000398962.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2570G>A
  hgvsp: ENSP00000328968.4:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2570G>A
  hgvsp: ENSP00000410257.1:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2570G>A
  hgvsp: ENSP00000403355.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2570G>A
  hgvsp: ENSP00000388797.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2570G>A
  hgvsp: ENSP00000413996.2:p.Gly857Asp
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11879
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly857Asp
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

3-38627416-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627416
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627416
    reference: chr 3
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: T
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2553C>A
  hgvsp: ENSP00000410257.1:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2553C>A
  hgvsp: ENSP00000416634.1:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2553C>A
  hgvsp: ENSP00000399524.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2553C>A
  hgvsp: ENSP00000397915.1:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2553C>A
  hgvsp: ENSP00000398266.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2553C>A
  hgvsp: ENSP00000413996.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2553C>A
  hgvsp: ENSP00000398962.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2553C>A
  hgvsp: ENSP00000388797.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2553C>A
  hgvsp: ENSP00000403355.2:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2553C>A
  hgvsp: ENSP00000328968.4:p.Phe851Leu
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe851Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

3-38627428-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627428
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627428
    reference: chr 3
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2541C>A
  hgvsp: ENST00000443581.1:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2541C>A
  hgvsp: ENST00000333535.4:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2541C>A
  hgvsp: ENST00000455624.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2541C>A
  hgvsp: ENST00000413689.1:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2541C>A
  hgvsp: ENST00000450102.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2541C>A
  hgvsp: ENST00000423572.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2541C>A
  hgvsp: ENST00000414099.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2541C>A
  hgvsp: ENST00000449557.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2541C>A
  hgvsp: ENST00000425664.1:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2541C>A
  hgvsp: ENST00000451551.2:c.2541C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala847Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

3-38627440-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627440
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627440
    reference: chr 3
allele count: 3
allele frequency: 2.473696362017217e-5
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2529A>G
  hgvsp: ENST00000413689.1:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2529A>G
  hgvsp: ENST00000333535.4:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2529A>G
  hgvsp: ENST00000425664.1:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2529A>G
  hgvsp: ENST00000414099.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2529A>G
  hgvsp: ENST00000455624.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2529A>G
  hgvsp: ENST00000451551.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2529A>G
  hgvsp: ENST00000423572.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2529A>G
  hgvsp: ENST00000449557.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2529A>G
  hgvsp: ENST00000443581.1:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2529A>G
  hgvsp: ENST00000450102.2:c.2529A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr843Thr
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

3-38627446-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627446
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627446
    reference: chr 3
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2523C>A
  hgvsp: ENSP00000403355.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2523C>A
  hgvsp: ENSP00000398266.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2523C>A
  hgvsp: ENSP00000413996.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2523C>A
  hgvsp: ENSP00000397915.1:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2523C>A
  hgvsp: ENSP00000399524.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2523C>A
  hgvsp: ENSP00000416634.1:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2523C>A
  hgvsp: ENSP00000398962.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2523C>A
  hgvsp: ENSP00000388797.2:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2523C>A
  hgvsp: ENSP00000410257.1:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2523C>A
  hgvsp: ENSP00000328968.4:p.Asn841Lys
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn841Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-38627452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627452
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627452
    reference: chr 3
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2517G>A
  hgvsp: ENST00000443581.1:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2517G>A
  hgvsp: ENST00000425664.1:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2517G>A
  hgvsp: ENST00000413689.1:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2517G>A
  hgvsp: ENST00000450102.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2517G>A
  hgvsp: ENST00000333535.4:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2517G>A
  hgvsp: ENST00000423572.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2517G>A
  hgvsp: ENST00000455624.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2517G>A
  hgvsp: ENST00000451551.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2517G>A
  hgvsp: ENST00000414099.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2517G>A
  hgvsp: ENST00000449557.2:c.2517G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu839Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

3-38627463-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627463
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627463
    reference: chr 3
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2506G>A
  hgvsp: ENSP00000398962.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2506G>A
  hgvsp: ENSP00000410257.1:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2506G>A
  hgvsp: ENSP00000403355.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2506G>A
  hgvsp: ENSP00000398266.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2506G>A
  hgvsp: ENSP00000388797.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2506G>A
  hgvsp: ENSP00000399524.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2506G>A
  hgvsp: ENSP00000413996.2:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2506G>A
  hgvsp: ENSP00000397915.1:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2506G>A
  hgvsp: ENSP00000416634.1:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2506G>A
  hgvsp: ENSP00000328968.4:p.Val836Met
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val836Met
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

3-38627472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627472
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627472
    reference: chr 3
allele count: 20
allele frequency: 1.650546330835507e-4
allele num: 121172
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2497G>A
  hgvsp: ENSP00000413996.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2497G>A
  hgvsp: ENSP00000399524.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2497G>A
  hgvsp: ENSP00000328968.4:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2497G>A
  hgvsp: ENSP00000403355.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2497G>A
  hgvsp: ENSP00000398266.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2497G>A
  hgvsp: ENSP00000416634.1:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2497G>A
  hgvsp: ENSP00000397915.1:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2497G>A
  hgvsp: ENSP00000398962.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2497G>A
  hgvsp: ENSP00000410257.1:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: uncertain_significance
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2497G>A
  hgvsp: ENSP00000388797.2:p.Gly833Arg
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 14376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Gly833Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

3-38627473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627473
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627473
    reference: chr 3
allele count: 4
allele frequency: 3.30114714863415e-5
allele num: 121170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2496C>T
  hgvsp: ENST00000423572.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2496C>T
  hgvsp: ENST00000449557.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2496C>T
  hgvsp: ENST00000451551.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2496C>T
  hgvsp: ENST00000443581.1:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2496C>T
  hgvsp: ENST00000425664.1:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2496C>T
  hgvsp: ENST00000455624.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2496C>T
  hgvsp: ENST00000414099.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2496C>T
  hgvsp: ENST00000333535.4:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2496C>T
  hgvsp: ENST00000413689.1:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2496C>T
  hgvsp: ENST00000450102.2:c.2496C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7607
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile832Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

3-38627521-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627521
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627521
    reference: chr 3
allele count: 1
allele frequency: 8.527184664711099e-6
allele num: 117272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2448C>A
  hgvsp: ENSP00000398266.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2448C>A
  hgvsp: ENSP00000399524.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2448C>A
  hgvsp: ENSP00000413996.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2448C>A
  hgvsp: ENSP00000397915.1:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2448C>A
  hgvsp: ENSP00000410257.1:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2448C>A
  hgvsp: ENSP00000416634.1:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2448C>A
  hgvsp: ENSP00000398962.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2448C>A
  hgvsp: ENSP00000403355.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2448C>A
  hgvsp: ENSP00000328968.4:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2448C>A
  hgvsp: ENSP00000388797.2:p.Phe816Leu
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10968
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe816Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

3-38627528-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627528
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627528
    reference: chr 3
allele count: 2
allele frequency: 1.761617869851672e-5
allele num: 113532
alternate allele: T
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2441G>A
  hgvsp: ENSP00000410257.1:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2441G>A
  hgvsp: ENSP00000398266.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2441G>A
  hgvsp: ENSP00000388797.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2441G>A
  hgvsp: ENSP00000397915.1:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2441G>A
  hgvsp: ENSP00000403355.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2441G>A
  hgvsp: ENSP00000328968.4:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2441G>A
  hgvsp: ENSP00000416634.1:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2441G>A
  hgvsp: ENSP00000413996.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2441G>A
  hgvsp: ENSP00000399524.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2441G>A
  hgvsp: ENSP00000398962.2:p.Arg814Gln
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg814Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

3-38627537-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627537
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627537
    reference: chr 3
allele count: 37
allele frequency: 3.462344662374607e-4
allele num: 106864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-5C>A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16968
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 3.25e1
  variant carriers: 0
hgvs: c.2437-5C>A
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

3-38627545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627545
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627545
    reference: chr 3
allele count: 105
allele frequency: 1.022395326192795e-3
allele num: 102700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-13C>T
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8455
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 20098
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

3-38627545-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627545
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627545
    reference: chr 3
allele count: 1
allele frequency: 9.737098344693281e-6
allele num: 102700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-13C>A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

3-38627560-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627560
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627560
    reference: chr 3
allele count: 1
allele frequency: 1.05873883030534e-5
allele num: 94452
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-28A>G
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25388
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

3-38627576-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627576
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627576
    reference: chr 3
allele count: 0
allele frequency: 0.0e0
allele num: 79772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-44G>C
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16496
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17099
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

3-38627576-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38627576
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38627576
    reference: chr 3
allele count: 24
allele frequency: 3.008574437145866e-4
allele num: 79772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2437-44G>A
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16496
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20849
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17099
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5637
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

3-38628846-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38628846
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38628846
    reference: chr 3
allele count: 1
allele frequency: 1.15350897429982e-5
allele num: 86692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2436+45A>G
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20911
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8651
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5815
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/3-38628851-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38628851
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38628852
    reference: chr 3
allele count: 249
allele frequency: 2.861279646993933e-3
allele num: 87024
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2436+39dupG
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14126
  bin: 7.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8707
  bin: 1.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 20621
  bin: 1.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 2.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7650
  bin: 6.25e1
  variant carriers: 8
num of homozygotes: 2
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/3-38628851-ACCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 38628851
    reference: chr 3
  end: Position
    type: ExactPosition
    position: 38628848
    reference: chr 3
allele count: 1
allele frequency: 1.149108291965435e-5
allele num: 87024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000413996
  ensembl transcript: ENST00000449557
  gene symbol: SCN5A
  hgvsc: ENST00000449557.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000397915
  ensembl transcript: ENST00000443581
  gene symbol: SCN5A
  hgvsc: ENST00000443581.1:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000410257
  ensembl transcript: ENST00000413689
  gene symbol: SCN5A
  hgvsc: ENST00000413689.1:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000403355
  ensembl transcript: ENST00000450102
  gene symbol: SCN5A
  hgvsc: ENST00000450102.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000416634
  ensembl transcript: ENST00000425664
  gene symbol: SCN5A
  hgvsc: ENST00000425664.1:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000399524
  ensembl transcript: ENST00000455624
  gene symbol: SCN5A
  hgvsc: ENST00000455624.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000388797
  ensembl transcript: ENST00000451551
  gene symbol: SCN5A
  hgvsc: ENST00000451551.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398266
  ensembl transcript: ENST00000423572
  gene symbol: SCN5A
  hgvsc: ENST00000423572.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000328968
  ensembl transcript: ENST00000333535
  gene symbol: SCN5A
  hgvsc: ENST00000333535.4:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183873
  ensembl protein: ENSP00000398962
  ensembl transcript: ENST00000414099
  gene symbol: SCN5A
  hgvsc: ENST00000414099.2:c.2436+37_2436+39delGGG
  variant of: http://identifiers.org/hgnc/10593
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20621
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: ACCC

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26523
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.122448979591836e-3
allele num: 490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.785714285714286e-2
allele num: 168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.357205e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.441e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 3.771e1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 3.724e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

GenotypeQuality
all individuals: 70
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.0e-2
allele num: 20
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.441e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.85e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

DP
type: SiteQuality
SIO_000300: 1.357205e6

MQ
type: SiteQuality
SIO_000300: 3.771e1

FS
type: SiteQuality
SIO_000300: 3.724e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 148
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 72
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 24
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 12
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 26479
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 80
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 15
bin: 7.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 2.403846153846154e-2
allele num: 208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 8.333333333333333e-2
allele num: 36
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.846153846153846e-2
allele num: 26
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.968944099378882e-2
allele num: 644
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 1.352217e6

FS
type: SiteQuality
SIO_000300: 3.2783e1

MQ
type: SiteQuality
SIO_000300: 5.016e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.958e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.71e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e0

GenotypeQuality
all individuals: 658
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3793
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7775
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5309
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.677089468330031e-5
allele num: 37354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3500
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.737e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.63e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.335e-1

MQ
type: SiteQuality
SIO_000300: 4.017e1

DP
type: SiteQuality
SIO_000300: 1.327833e6

QD
type: SiteQuality
SIO_000300: 2.16e0

GenotypeQuality
all individuals: 1543
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2177
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2083
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7331
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3237
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2089
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6342
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5549
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.158211721102618e-4
allele num: 51804
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.337603416066186e-4
allele num: 7494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.954743946010321e-4
allele num: 5038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.448e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.14e-2

FS
type: SiteQuality
SIO_000300: 5.1864e1

DP
type: SiteQuality
SIO_000300: 1.299425e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.404e1

MQ
type: SiteQuality
SIO_000300: 5.247e1

GenotypeQuality
all individuals: 207
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4027
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.796751473336208e-5
allele num: 55656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

DP
type: SiteQuality
SIO_000300: 1.311619e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.074e0

MQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.065e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

FS
type: SiteQuality
SIO_000300: 2.3314e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

QD
type: SiteQuality
SIO_000300: 3.776e1

VQSLOD
type: SiteQuality
SIO_000300: -3.257e0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4396
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.166e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.589e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

MQ
type: SiteQuality
SIO_000300: 3.912e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

DP
type: SiteQuality
SIO_000300: 1.317534e6

GenotypeQuality
all individuals: 7631
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5374
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.130198915009042e-4
allele num: 8848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 1.317534e6

VQSLOD
type: SiteQuality
SIO_000300: -9.166e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 3.912e1

MQRankSum
type: SiteQuality
SIO_000300: -1.589e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
all individuals: 5374
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3456
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5628
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4396
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.130198915009042e-4
allele num: 8848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.166e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.27e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

QD
type: SiteQuality
SIO_000300: 1.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.589e0

DP
type: SiteQuality
SIO_000300: 1.317534e6

MQ
type: SiteQuality
SIO_000300: 3.912e1

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3061
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16878
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1891
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7534
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6238
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.168492867479843e-5
allele num: 58044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

MQ
type: SiteQuality
SIO_000300: 3.912e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

QD
type: SiteQuality
SIO_000300: 1.683e1

DP
type: SiteQuality
SIO_000300: 1.332269e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 4946
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
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GenotypeQuality
all individuals: 5282
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.138952164009112e-4
allele num: 8780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.45e0

MQRankSum
type: SiteQuality
SIO_000300: -2.589e0

FS
type: SiteQuality
SIO_000300: 2.639e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

MQ
type: SiteQuality
SIO_000300: 4.824e1

DP
type: SiteQuality
SIO_000300: 1.349863e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

QD
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

GenotypeQuality
all individuals: 323
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2726
bin: 7.5e0
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GenotypeQuality
all individuals: 18081
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4946
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.345852111500584e-5
allele num: 11982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.589e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

DP
type: SiteQuality
SIO_000300: 1.349863e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.45e0

MQ
type: SiteQuality
SIO_000300: 4.824e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

FS
type: SiteQuality
SIO_000300: 2.639e0

QD
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1741
bin: 7.5e0
variant carriers: 9

GenotypeQuality
all individuals: 10329
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 3077
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1092
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 970
bin: 8.25e1
variant carriers: 10

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 10

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 15

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 225

African
type: Population
allele count: 45
allele frequency: 5.192707131317794e-3
allele num: 8666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 134
allele frequency: 2.285831257889529e-3
allele num: 58622
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.272480488632508e-3
allele num: 11788
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.21606648199446e-3
allele num: 7220
num of homozygotes: 0

Latino
type: Population
allele count: 26
allele frequency: 2.707205331112037e-3
allele num: 9604
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.319261213720317e-3
allele num: 758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 16
allele frequency: 2.719238613188307e-3
allele num: 5884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.358863e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 2.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.0323e1

MQ
type: SiteQuality
SIO_000300: 4.392e1

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 12

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 28

GenotypeQuality
all individuals: 10329
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 896
bin: 1.25e1
variant carriers: 13

GenotypeQuality
all individuals: 3077
bin: 3.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1092
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 15

GenotypeQuality
all individuals: 970
bin: 8.25e1
variant carriers: 13

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 17

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 25

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 33

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 33

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 704

South Asian
type: Population
allele count: 74
allele frequency: 6.277570410587038e-3
allele num: 11788
num of homozygotes: 0

Latino
type: Population
allele count: 96
allele frequency: 9.995835068721367e-3
allele num: 9604
num of homozygotes: 0

African
type: Population
allele count: 123
allele frequency: 1.419339949226864e-2
allele num: 8666
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.638522427440633e-3
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 360
allele frequency: 6.141039200300229e-3
allele num: 58622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 43
allele frequency: 7.307953772943576e-3
allele num: 5884
num of homozygotes: 0

East Asian
type: Population
allele count: 49
allele frequency: 6.786703601108033e-3
allele num: 7220
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 1.0323e1

DP
type: SiteQuality
SIO_000300: 1.358863e6

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

QD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 4.392e1

GenotypeQuality
all individuals: 1092
bin: 4.75e1
variant carriers: 29

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 85

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 64

GenotypeQuality
all individuals: 1000
bin: 7.25e1
variant carriers: 50

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 41

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 99

GenotypeQuality
all individuals: 811
bin: 1.75e1
variant carriers: 36

GenotypeQuality
all individuals: 3077
bin: 3.75e1
variant carriers: 42

GenotypeQuality
all individuals: 1741
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 47

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 33

GenotypeQuality
all individuals: 970
bin: 8.25e1
variant carriers: 45

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 45

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 2083

South Asian
type: Population
allele count: 253
allele frequency: 2.146250424160163e-2
allele num: 11788
num of homozygotes: 0

Latino
type: Population
allele count: 303
allele frequency: 3.154935443565181e-2
allele num: 9604
num of homozygotes: 0

African
type: Population
allele count: 301
allele frequency: 3.473344103392569e-2
allele num: 8666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 113
allele frequency: 1.920462270564242e-2
allele num: 5884
num of homozygotes: 0

East Asian
type: Population
allele count: 165
allele frequency: 2.285318559556787e-2
allele num: 7220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1156
allele frequency: 1.971955920985296e-2
allele num: 58622
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 1.187335092348285e-2
allele num: 758
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.392e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 1.0323e1

DP
type: SiteQuality
SIO_000300: 1.358863e6

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 2.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 86

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 4103

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 49

GenotypeQuality
all individuals: 811
bin: 1.75e1
variant carriers: 71

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 126

GenotypeQuality
all individuals: 780
bin: 5.75e1
variant carriers: 106

GenotypeQuality
all individuals: 10329
bin: 2.25e1
variant carriers: 80

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 57

GenotypeQuality
all individuals: 1092
bin: 4.75e1
variant carriers: 50

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 141

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 63

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 130

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 148

GenotypeQuality
all individuals: 1000
bin: 7.25e1
variant carriers: 82

Other
type: Population
allele count: 43
allele frequency: 5.672823218997362e-2
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 563
allele frequency: 5.862140774677218e-2
allele num: 9604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2448
allele frequency: 4.175906656204156e-2
allele num: 58622
num of homozygotes: 2

South Asian
type: Population
allele count: 599
allele frequency: 5.08143875127248e-2
allele num: 11788
num of homozygotes: 1

African
type: Population
allele count: 375
allele frequency: 4.327255942764828e-2
allele num: 8666
num of homozygotes: 1

East Asian
type: Population
allele count: 402
allele frequency: 5.56786703601108e-2
allele num: 7220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 243
allele frequency: 4.129843643779742e-2
allele num: 5884
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 1.0323e1

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

MQ
type: SiteQuality
SIO_000300: 4.392e1

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

DP
type: SiteQuality
SIO_000300: 1.358863e6

QD
type: SiteQuality
SIO_000300: 2.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeQuality
all individuals: 3077
bin: 3.75e1
variant carriers: 77

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 81

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 32

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 64

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 4787

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 84

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 133

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 107

GenotypeQuality
all individuals: 780
bin: 5.75e1
variant carriers: 97

GenotypeQuality
all individuals: 970
bin: 8.25e1
variant carriers: 103

GenotypeQuality
all individuals: 4377
bin: 3.25e1
variant carriers: 100

GenotypeQuality
all individuals: 780
bin: 8.75e1
variant carriers: 129

GenotypeQuality
all individuals: 10329
bin: 2.25e1
variant carriers: 69

GenotypeQuality
all individuals: 1000
bin: 7.25e1
variant carriers: 84

East Asian
type: Population
allele count: 521
allele frequency: 7.21606648199446e-2
allele num: 7220
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 282
allele frequency: 4.792658055744391e-2
allele num: 5884
num of homozygotes: 0

Other
type: Population
allele count: 40
allele frequency: 5.277044854881267e-2
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 589
allele frequency: 6.132861307788422e-2
allele num: 9604
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 3108
allele frequency: 5.301763842925864e-2
allele num: 58622
num of homozygotes: 1

South Asian
type: Population
allele count: 781
allele frequency: 6.62538174414659e-2
allele num: 11788
num of homozygotes: 1

African
type: Population
allele count: 216
allele frequency: 2.492499423032541e-2
allele num: 8666
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.358863e6

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

MQ
type: SiteQuality
SIO_000300: 4.392e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 2.32e0

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

FS
type: SiteQuality
SIO_000300: 1.0323e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

GenotypeQuality
all individuals: 3189
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1092
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 18

GenotypeQuality
all individuals: 16552
bin: 9.75e1
variant carriers: 906

GenotypeQuality
all individuals: 10329
bin: 2.25e1
variant carriers: 17

GenotypeQuality
all individuals: 8239
bin: 6.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1000
bin: 7.25e1
variant carriers: 21

GenotypeQuality
all individuals: 2219
bin: 6.75e1
variant carriers: 20

GenotypeQuality
all individuals: 3077
bin: 3.75e1
variant carriers: 15

GenotypeQuality
all individuals: 401
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 979
bin: 9.25e1
variant carriers: 31

GenotypeQuality
all individuals: 1229
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 1053
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 4377
bin: 3.25e1
variant carriers: 17

European (Non-Finnish)
type: Population
allele count: 588
allele frequency: 1.003036402715704e-2
allele num: 58622
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 37
allele frequency: 6.28823929299796e-3
allele num: 5884
num of homozygotes: 0

African
type: Population
allele count: 75
allele frequency: 8.654511885529657e-3
allele num: 8666
num of homozygotes: 0

Latino
type: Population
allele count: 114
allele frequency: 1.187005414410662e-2
allele num: 9604
num of homozygotes: 0

East Asian
type: Population
allele count: 109
allele frequency: 1.509695290858726e-2
allele num: 7220
num of homozygotes: 0

Other
type: Population
allele count: 9
allele frequency: 1.187335092348285e-2
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 182
allele frequency: 1.543942992874109e-2
allele num: 11788
num of homozygotes: 3

MQ
type: SiteQuality
SIO_000300: 4.392e1

MQRankSum
type: SiteQuality
SIO_000300: -2.637e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.638e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

FS
type: SiteQuality
SIO_000300: 1.0323e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.358863e6

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53317
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.905287623474724e-4
allele num: 3442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.577103e6

MQRankSum
type: SiteQuality
SIO_000300: -2.652e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.792e0

MQ
type: SiteQuality
SIO_000300: 4.641e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 7.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.357e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53317
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.357e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.792e0

MQ
type: SiteQuality
SIO_000300: 4.641e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.6e-1

DP
type: SiteQuality
SIO_000300: 1.577103e6

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53317
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.172839506172839e-3
allele num: 162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 224
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.641e1

MQRankSum
type: SiteQuality
SIO_000300: -2.652e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.357e-1

QD
type: SiteQuality
SIO_000300: 7.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.792e0

VQSLOD
type: SiteQuality
SIO_000300: 3.76e-1

DP
type: SiteQuality
SIO_000300: 1.577103e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

GenotypeQuality
all individuals: 48932
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.051524710830704e-4
allele num: 9510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1232
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1954
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.803e0

ReadPosRankSum
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SIO_000300: -2.26e-1

BaseQRankSum
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SIO_000300: 3.82e-1

MQRankSum
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SIO_000300: 2.26e0

QD
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InbreedingCoeff
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SIO_000300: -2.503e-1

VQSLOD
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SIO_000300: 1.684e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 1.881775e6

MQ
type: SiteQuality
SIO_000300: 5.039e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.962179602079225e-5
allele num: 11158
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.182e0

MQ
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SIO_000300: 5.357e1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -1.435e0

MQRankSum
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SIO_000300: -1.611e0

DP
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SIO_000300: 2.041368e6

QD
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SIO_000300: 1.442e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: -2.078e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62790
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.833401667350006e-5
allele num: 14634
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

FS
type: SiteQuality
SIO_000300: 3.532e0

ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.229e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -3.957e-1

DP
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SIO_000300: 1.839066e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.113e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.836e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
all individuals: 36122
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.805203294548307e-4
allele num: 15298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550195324610901e-5
allele num: 64508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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DP
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SIO_000300: 1.798063e6

QD
type: SiteQuality
SIO_000300: 1.297e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

MQ
type: SiteQuality
SIO_000300: 5.625e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.16e-1

FS
type: SiteQuality
SIO_000300: 3.702e0

MQ
type: SiteQuality
SIO_000300: 5.696e1

MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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SIO_000300: 1.149e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.99847026005579e-5
allele num: 66678
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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FS
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 4.967e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.744e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

DP
type: SiteQuality
SIO_000300: 1.772107e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.638e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.065e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
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SIO_000300: 1.22e0

BaseQRankSum
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SIO_000300: -7.84e-1

QD
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SIO_000300: 9.23e0

MQ
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SIO_000300: 5.744e1

VQSLOD
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SIO_000300: -1.641e0

ClippingRankSum
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SIO_000300: -7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 1.772179e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.772179e6

MQRankSum
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SIO_000300: 1.66e0

VQSLOD
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SIO_000300: -1.641e0

QD
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SIO_000300: 9.23e0

FS
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.744e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.855e0

MQ
type: SiteQuality
SIO_000300: 5.726e1

VQSLOD
type: SiteQuality
SIO_000300: -8.665e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.213e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.307e0

DP
type: SiteQuality
SIO_000300: 1.772429e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
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SIO_000300: 1.772518e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.136e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

VQSLOD
type: SiteQuality
SIO_000300: -4.611e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 8.093e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
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South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.791e1

DP
type: SiteQuality
SIO_000300: 1.772616e6

FS
type: SiteQuality
SIO_000300: 2.433e0

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 3.21e-1

MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.903e1

DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQ
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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DP
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.891e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
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South Asian
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European (Non-Finnish)
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allele num: 66740
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

African
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ReadPosRankSum
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MQRankSum
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FS
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DP
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele num: 66740
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Other
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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FS
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MQRankSum
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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QD
type: SiteQuality
SIO_000300: 1.103e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 66740
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Other
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African
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East Asian
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Latino
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MQ
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SIO_000300: 5.873e1

QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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South Asian
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African
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Latino
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Other
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European (Finnish)
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East Asian
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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East Asian
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Latino
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South Asian
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Other
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African
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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FS
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DP
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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Latino
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Other
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ClippingRankSum
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VQSLOD
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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SIO_000300: 1.773571e6

BaseQRankSum
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SIO_000300: -6.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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QD
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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SIO_000300: -6.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
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African
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allele frequency: 9.807767752059631e-5
allele num: 10196
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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ReadPosRankSum
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SIO_000300: -2.8e-1

MQ
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SIO_000300: 6.0e1

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.803921568627451e-5
allele num: 10200
num of homozygotes: 0

Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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QD
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DP
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ReadPosRankSum
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MQ
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BaseQRankSum
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VQSLOD
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SIO_000300: 9.48e-1

MQRankSum
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SIO_000300: 8.1e-2

InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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SIO_000300: 1.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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European (Finnish)
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Other
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele count: 0
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Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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Other
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ClippingRankSum
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MQRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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South Asian
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ReadPosRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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MQRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.896e1

BaseQRankSum
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SIO_000300: -1.177e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 1.743e0

QD
type: SiteQuality
SIO_000300: 2.935e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

FS
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SIO_000300: 4.63e-1

MQRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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SIO_000300: 1.77445e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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SIO_000300: 1.787e0

ReadPosRankSum
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DP
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MQ
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SIO_000300: 5.941e1

MQRankSum
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SIO_000300: 4.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.78e-1

QD
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SIO_000300: 1.337e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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SIO_000300: -1.258e0

QD
type: SiteQuality
SIO_000300: 1.44e1

FS
type: SiteQuality
SIO_000300: 1.686e0

VQSLOD
type: SiteQuality
SIO_000300: -1.944e0

DP
type: SiteQuality
SIO_000300: 1.774008e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.750390015600624e-5
allele num: 10256
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.594e0

FS
type: SiteQuality
SIO_000300: 6.282e0

MQRankSum
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SIO_000300: 4.33e-1

QD
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InbreedingCoeff
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SIO_000300: 2.0e-4

MQ
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SIO_000300: 5.964e1

DP
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ClippingRankSum
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SIO_000300: 5.42e-1

ReadPosRankSum
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VQSLOD
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SIO_000300: 5.8e-2

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
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allele count: 14
allele frequency: 8.48073661255149e-4
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.499640028797696e-5
allele num: 66672
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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African
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allele num: 10242
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European (Finnish)
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European (Non-Finnish)
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allele num: 66682
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Other
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MQ
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SIO_000300: 5.967e1

VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
all individuals: 1701
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 6173
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variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.223391240518718e-4
allele num: 8174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582078217947095e-5
allele num: 63208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14952
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

VQSLOD
type: SiteQuality
SIO_000300: 4.55e-1

FS
type: SiteQuality
SIO_000300: 7.04e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

DP
type: SiteQuality
SIO_000300: 1.605855e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 3.237e1

GenotypeQuality
all individuals: 561
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 37

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 5.75e1
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GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.232641214556821e-4
allele num: 8958
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.248477819657872e-5
allele num: 13796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.682957812395534e-4
allele num: 59828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6122
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.471e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.09e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

FS
type: SiteQuality
SIO_000300: 8.62e-1

DP
type: SiteQuality
SIO_000300: 1.392182e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

GenotypeQuality
all individuals: 452
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4298
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18587
bin: 6.25e1
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GenotypeQuality
all individuals: 1805
bin: 9.75e1
variant carriers: 103

GenotypeQuality
all individuals: 708
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4055
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 89
allele frequency: 1.542567942318358e-3
allele num: 57696
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 5.345143555284056e-4
allele num: 13096
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.262287951283167e-4
allele num: 9196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.350083752093803e-4
allele num: 5970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.62000462000462e-4
allele num: 8658
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.382e1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

DP
type: SiteQuality
SIO_000300: 1.238612e6

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 197
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4055
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 370
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GenotypeQuality
all individuals: 601
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GenotypeQuality
all individuals: 1892
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variant carriers: 0

GenotypeQuality
all individuals: 1805
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variant carriers: 1

GenotypeQuality
all individuals: 415
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variant carriers: 0

GenotypeQuality
all individuals: 752
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variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.155001155001155e-4
allele num: 8658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

DP
type: SiteQuality
SIO_000300: 1.238612e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.382e1

GenotypeQuality
all individuals: 955
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
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GenotypeQuality
all individuals: 5812
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variant carriers: 0

GenotypeQuality
all individuals: 2518
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GenotypeQuality
all individuals: 8027
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GenotypeQuality
all individuals: 677
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GenotypeQuality
all individuals: 915
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 713
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GenotypeQuality
all individuals: 1710
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GenotypeQuality
all individuals: 570
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GenotypeQuality
all individuals: 6973
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variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869019138755981e-5
allele num: 53504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.068e0

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.049547e6

GenotypeQuality
all individuals: 2616
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7538
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4805
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
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GenotypeQuality
all individuals: 3269
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 5637
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GenotypeQuality
all individuals: 1729
bin: 9.75e1
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GenotypeQuality
all individuals: 647
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GenotypeQuality
all individuals: 4598
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7110
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.43344e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.351e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.058e0

GenotypeQuality
all individuals: 647
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3269
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4598
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1729
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 823
bin: 2.5e0
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GenotypeQuality
all individuals: 4463
bin: 7.5e0
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GenotypeQuality
all individuals: 363
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 2616
bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 1827
bin: 4.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 1635
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 1

African
type: Population
allele count: 24
allele frequency: 3.375527426160338e-3
allele num: 7110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5246
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.058e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.351e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

DP
type: SiteQuality
SIO_000300: 9.43344e5

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

GenotypeQuality
all individuals: 6751
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13609
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 9.25e1
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GenotypeQuality
all individuals: 1318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
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GenotypeQuality
all individuals: 2005
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 2.5e0
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GenotypeQuality
all individuals: 2784
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GenotypeQuality
all individuals: 536
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GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 5989
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GenotypeQuality
all individuals: 634
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GenotypeQuality
all individuals: 195
bin: 5.75e1
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GenotypeQuality
all individuals: 1415
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.970831690973591e-5
allele num: 50740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.788e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
SIO_000300: -2.183e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.164e1

DP
type: SiteQuality
SIO_000300: 9.65758e5

GenotypeQuality
all individuals: 1359
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 909
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 943
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1494
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2984
bin: 9.75e1
variant carriers: 213

GenotypeQuality
all individuals: 299
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1449
bin: 6.75e1
variant carriers: 8

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 12

GenotypeQuality
all individuals: 8475
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14032
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6485
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 207
allele frequency: 4.061690605133035e-3
allele num: 50964
num of homozygotes: 1

South Asian
type: Population
allele count: 19
allele frequency: 2.241623407267579e-3
allele num: 8476
num of homozygotes: 1

African
type: Population
allele count: 4
allele frequency: 5.261773217574323e-4
allele num: 7602
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.716981132075472e-3
allele num: 636
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.980982567353407e-3
allele num: 7572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.881821603312006e-4
allele num: 5314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

DP
type: SiteQuality
SIO_000300: 9.8836e5

QD
type: SiteQuality
SIO_000300: 1.056e1