2-242076697-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076697
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076697
    reference: chr 2
allele count: 1
allele frequency: 8.290911502810618e-6
allele num: 120614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-18G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-18G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3631
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2664
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

2-242076699-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076699
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076699
    reference: chr 2
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-20A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-20A>G
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4698
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4924
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11867
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

2-242076703-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076703
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076703
    reference: chr 2
allele count: 9
allele frequency: 7.465286418155577e-5
allele num: 120558
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-24C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-24C>G
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11352
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21723
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

2-242076711-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076711
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076711
    reference: chr 2
allele count: 12
allele frequency: 9.964294610977331e-5
allele num: 120430
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-32G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12184
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10410
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD

2-242076720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076720
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076720
    reference: chr 2
allele count: 4
allele frequency: 3.323915572544457e-5
allele num: 120340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-41G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-41G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3635
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

2-242076721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076721
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076721
    reference: chr 2
allele count: 2
allele frequency: 1.662703889064397e-5
allele num: 120286
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-42C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-42C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12031
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21726
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11227
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

2-242076722-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076722
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076722
    reference: chr 2
allele count: 1
allele frequency: 8.312413758707254e-6
allele num: 120302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-43A>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-43A>C
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4905
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD

2-242076724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076724
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076724
    reference: chr 2
allele count: 1
allele frequency: 8.315316813570598e-6
allele num: 120260
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-45C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-45C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4689
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

2-242076730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076730
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076730
    reference: chr 2
allele count: 1
allele frequency: 8.317253310266817e-6
allele num: 120232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-51C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-51C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3524
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4923
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/2-242076731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242076731
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242076731
    reference: chr 2
allele count: 1
allele frequency: 8.318775476249896e-6
allele num: 120210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.877-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*257-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.877-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.877-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.319-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.321-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.229-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.877-52G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.229-52G>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4929
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-242077318-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077318
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077318
    reference: chr 2
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+50C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+50C>G
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15734
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-242077321-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077321
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077321
    reference: chr 2
allele count: 9213
allele frequency: 7.591963873689762e-2
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+47G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+47G>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 2.25e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 8.25e1
  variant carriers: 331
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 844
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 563
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 6.75e1
  variant carriers: 603
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 5.25e1
  variant carriers: 901
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 5.75e1
  variant carriers: 732
genotype depth: GenotypeDepth
  all individuals: 15690
  bin: 2.75e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 9.75e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 9.25e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 3.75e1
  variant carriers: 658
genotype depth: GenotypeDepth
  all individuals: 9332
  bin: 3.25e1
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 4.25e1
  variant carriers: 776
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 8.75e1
  variant carriers: 310
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 6.25e1
  variant carriers: 695
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.75e1
  variant carriers: 419
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5211
  bin: 6.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 3
num of homozygotes: 467
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-242077323-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077323
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077323
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+45T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+45T>C
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5642
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

2-242077324-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077324
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077324
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+44T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+44T>C
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15693
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

2-242077330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077330
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077330
    reference: chr 2
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+38G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+38G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18846
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-242077333-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077333
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077333
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+35G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+35G>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18857
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24029
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

2-242077333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077333
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077333
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+35G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+35G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

2-242077336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077336
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077336
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+32G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+32G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5877
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24027
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-242077338-TCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077338
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077336
    reference: chr 2
allele count: 4
allele frequency: 3.295164346321773e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+28_876+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+28_228+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+28_876+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+28_*256+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+28_876+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+28_876+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+28_320+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+28_228+29delTG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+28_318+29delTG
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: TCA
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP

2-242077345-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077345
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077345
    reference: chr 2
allele count: 93
allele frequency: 7.661004662503913e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+23C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+23C>G
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24041
  bin: 9.75e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

2-242077348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077348
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077348
    reference: chr 2
allele count: 11701
allele frequency: 9.640767899810497e-2
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+20G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+20G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 774
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 3.75e1
  variant carriers: 320
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.25e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 4.25e1
  variant carriers: 454
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 4.75e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 5.75e1
  variant carriers: 702
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 8.25e1
  variant carriers: 597
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 3.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 7.75e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 2.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 6.25e1
  variant carriers: 765
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.25e1
  variant carriers: 498
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 2.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 9.75e1
  variant carriers: 3171
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 5.25e1
  variant carriers: 644
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 8.75e1
  variant carriers: 580
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 8.25e1
  variant carriers: 21
num of homozygotes: 841
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/2-242077348-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077348
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077348
    reference: chr 2
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+20G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+20G>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-242077349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077349
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077349
    reference: chr 2
allele count: 19
allele frequency: 1.565254642215742e-4
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+19C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+19C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3665
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

2-242077351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077351
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077351
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+17C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23861
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-242077359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077359
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077359
    reference: chr 2
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+9C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+9C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3038
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-242077366-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077366
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077367
    reference: chr 2
allele count: 7
allele frequency: 5.766537606063102e-5
allele num: 121390
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.320+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.228+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.228+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.876+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.876+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.318+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.876+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.876+1dupG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*256+1dupG
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10620
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17042
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: c.876+1dupG
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

2-242077372-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077372
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077372
    reference: chr 2
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.872C>T
  hgvsp: ENSP00000351475.4:p.Pro291Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*252C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.224C>T
  hgvsp: ENSP00000443083.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.872C>T
  hgvsp: ENSP00000384438.3:p.Pro291Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.872C>T
  hgvsp: ENSP00000234040.4:p.Pro291Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.224C>T
  hgvsp: ENSP00000400734.1:p.Pro75Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.872C>T
  hgvsp: ENSP00000384016.1:p.Pro291Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.314C>T
  hgvsp: ENSP00000441374.1:p.Pro105Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.316C>T
  hgvsp: ENSP00000395672.1:p.Pro106Leu
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5772
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro291Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ

2-242077378-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077378
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077378
    reference: chr 2
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.308A>G
  hgvsp: ENSP00000441374.1:p.His103Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.866A>G
  hgvsp: ENSP00000384438.3:p.His289Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.310A>G
  hgvsp: ENSP00000395672.1:p.His104Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.218A>G
  hgvsp: ENSP00000443083.1:p.His73Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.866A>G
  hgvsp: ENSP00000384016.1:p.His289Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.866A>G
  hgvsp: ENSP00000351475.4:p.His289Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.218A>G
  hgvsp: ENSP00000400734.1:p.His73Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*246A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.866A>G
  hgvsp: ENSP00000234040.4:p.His289Arg
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His289Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

2-242077388-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077388
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077388
    reference: chr 2
allele count: 9
allele frequency: 7.41485277397881e-5
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.208T>C
  hgvsp: ENSP00000400734.1:p.Ser70Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.856T>C
  hgvsp: ENSP00000384016.1:p.Ser286Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.856T>C
  hgvsp: ENSP00000234040.4:p.Ser286Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*236T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.856T>C
  hgvsp: ENSP00000351475.4:p.Ser286Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.298T>C
  hgvsp: ENSP00000441374.1:p.Ser100Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.300T>C
  hgvsp: ENSP00000395672.1:p.Ser101Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.856T>C
  hgvsp: ENSP00000384438.3:p.Ser286Pro
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.208T>C
  hgvsp: ENSP00000443083.1:p.Ser70Pro
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23915
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser286Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

2-242077396-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077396
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077396
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.292T>A
  hgvsp: ENSP00000395672.1:p.Leu98His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.848T>A
  hgvsp: ENSP00000351475.4:p.Leu283His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.848T>A
  hgvsp: ENSP00000234040.4:p.Leu283His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.848T>A
  hgvsp: ENSP00000384016.1:p.Leu283His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.848T>A
  hgvsp: ENSP00000384438.3:p.Leu283His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*228T>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.290T>A
  hgvsp: ENSP00000441374.1:p.Leu97His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.200T>A
  hgvsp: ENSP00000443083.1:p.Leu67His
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.200T>A
  hgvsp: ENSP00000400734.1:p.Leu67His
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17016
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu283His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-242077403-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077403
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077403
    reference: chr 2
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.841G>T
  hgvsp: ENSP00000351475.4:p.Val281Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.285G>T
  hgvsp: ENSP00000395672.1:p.Val96Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.841G>T
  hgvsp: ENSP00000384438.3:p.Val281Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.193G>T
  hgvsp: ENSP00000443083.1:p.Val65Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.841G>T
  hgvsp: ENSP00000384016.1:p.Val281Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.193G>T
  hgvsp: ENSP00000400734.1:p.Val65Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*221G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.283G>T
  hgvsp: ENSP00000441374.1:p.Val95Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.841G>T
  hgvsp: ENSP00000234040.4:p.Val281Leu
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val281Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

2-242077410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077410
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077410
    reference: chr 2
allele count: 8
allele frequency: 6.591957811470006e-5
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.186C>T
  hgvsp: ENST00000415234.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.186C>T
  hgvsp: ENST00000539818.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.834C>T
  hgvsp: ENST00000405260.1:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.834C>T
  hgvsp: ENST00000358649.4:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.276C>T
  hgvsp: ENST00000544142.1:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*214C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.834C>T
  hgvsp: ENST00000403638.3:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.278C>T
  hgvsp: ENST00000433589.1:c.278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.834C>T
  hgvsp: ENST00000234040.4:c.834C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10574
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile278Ile
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

2-242077416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077416
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077416
    reference: chr 2
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*208C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.270C>T
  hgvsp: ENST00000544142.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.828C>T
  hgvsp: ENST00000358649.4:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.180C>T
  hgvsp: ENST00000539818.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.180C>T
  hgvsp: ENST00000415234.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.828C>T
  hgvsp: ENST00000234040.4:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.272C>T
  hgvsp: ENST00000433589.1:c.272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.828C>T
  hgvsp: ENST00000405260.1:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.828C>T
  hgvsp: ENST00000403638.3:c.828C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp276Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

2-242077416-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077416
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077416
    reference: chr 2
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.180C>A
  hgvsp: ENSP00000443083.1:p.Asp60Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.272C>A
  hgvsp: ENSP00000395672.1:p.Asp91Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.180C>A
  hgvsp: ENSP00000400734.1:p.Asp60Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.828C>A
  hgvsp: ENSP00000384016.1:p.Asp276Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.828C>A
  hgvsp: ENSP00000351475.4:p.Asp276Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*208C>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.828C>A
  hgvsp: ENSP00000384438.3:p.Asp276Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.828C>A
  hgvsp: ENSP00000234040.4:p.Asp276Glu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.270C>A
  hgvsp: ENSP00000441374.1:p.Asp90Glu
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23910
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp276Glu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/2-242077433-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077433
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077433
    reference: chr 2
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.253G>T
  hgvsp: ENSP00000441374.1:p.Gly85Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.811G>T
  hgvsp: ENSP00000351475.4:p.Gly271Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.255G>T
  hgvsp: ENSP00000395672.1:p.Gly86Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.163G>T
  hgvsp: ENSP00000443083.1:p.Gly55Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.163G>T
  hgvsp: ENSP00000400734.1:p.Gly55Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*191G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.811G>T
  hgvsp: ENSP00000384016.1:p.Gly271Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.811G>T
  hgvsp: ENSP00000234040.4:p.Gly271Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.811G>T
  hgvsp: ENSP00000384438.3:p.Gly271Trp
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10414
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6250
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16974
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly271Trp
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

2-242077435-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077435
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077434
    reference: chr 2
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.160delG
  hgvsp: ENSP00000400734.1:p.Ala54LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.808delG
  hgvsp: ENSP00000351475.4:p.Ala270LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.252delG
  hgvsp: ENSP00000395672.1:p.Ala85LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.808delG
  hgvsp: ENSP00000384016.1:p.Ala270LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*188delG
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.808delG
  hgvsp: ENSP00000234040.4:p.Ala270LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.808delG
  hgvsp: ENSP00000384438.3:p.Ala270LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.160delG
  hgvsp: ENSP00000443083.1:p.Ala54LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.250delG
  hgvsp: ENSP00000441374.1:p.Ala84LeufsTer8
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 10398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2326
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala270LeufsTer8
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: GC
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-242077439-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077439
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077439
    reference: chr 2
allele count: 6
allele frequency: 4.947963912849862e-5
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.805G>C
  hgvsp: ENSP00000384438.3:p.Val269Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.805G>C
  hgvsp: ENSP00000234040.4:p.Val269Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.249G>C
  hgvsp: ENSP00000395672.1:p.Val84Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*185G>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.247G>C
  hgvsp: ENSP00000441374.1:p.Val83Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.157G>C
  hgvsp: ENSP00000400734.1:p.Val53Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.805G>C
  hgvsp: ENSP00000384016.1:p.Val269Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.805G>C
  hgvsp: ENSP00000351475.4:p.Val269Leu
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.157G>C
  hgvsp: ENSP00000443083.1:p.Val53Leu
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16969
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val269Leu
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

2-242077439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077439
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077439
    reference: chr 2
allele count: 2
allele frequency: 1.649321304283287e-5
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.157G>A
  hgvsp: ENSP00000400734.1:p.Val53Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.805G>A
  hgvsp: ENSP00000351475.4:p.Val269Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.805G>A
  hgvsp: ENSP00000234040.4:p.Val269Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.805G>A
  hgvsp: ENSP00000384016.1:p.Val269Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.247G>A
  hgvsp: ENSP00000441374.1:p.Val83Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*185G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.249G>A
  hgvsp: ENSP00000395672.1:p.Val84Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.157G>A
  hgvsp: ENSP00000443083.1:p.Val53Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.805G>A
  hgvsp: ENSP00000384438.3:p.Val269Met
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3579
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val269Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

2-242077440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077440
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077440
    reference: chr 2
allele count: 41
allele frequency: 3.38177799039905e-4
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.156C>T
  hgvsp: ENST00000539818.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.804C>T
  hgvsp: ENST00000403638.3:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.246C>T
  hgvsp: ENST00000544142.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.156C>T
  hgvsp: ENST00000415234.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*184C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.804C>T
  hgvsp: ENST00000405260.1:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.248C>T
  hgvsp: ENST00000433589.1:c.248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.804C>T
  hgvsp: ENST00000358649.4:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.804C>T
  hgvsp: ENST00000234040.4:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5688
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19289
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10342
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp268Asp
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

2-242077444-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077444
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077443
    reference: chr 2
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.799delG
  hgvsp: ENSP00000234040.4:p.Glu267ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.151delG
  hgvsp: ENSP00000443083.1:p.Glu51ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.799delG
  hgvsp: ENSP00000384438.3:p.Glu267ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.241delG
  hgvsp: ENSP00000441374.1:p.Glu81ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.151delG
  hgvsp: ENSP00000400734.1:p.Glu51ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.243delG
  hgvsp: ENSP00000395672.1:p.Glu82ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.799delG
  hgvsp: ENSP00000351475.4:p.Glu267ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.799delG
  hgvsp: ENSP00000384016.1:p.Glu267ArgfsTer11
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*179delG
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu267ArgfsTer11
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: TC
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-242077451-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077451
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077451
    reference: chr 2
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*173T>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.145T>A
  hgvsp: ENSP00000443083.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.793T>A
  hgvsp: ENSP00000234040.4:p.Ser265Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.793T>A
  hgvsp: ENSP00000384438.3:p.Ser265Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.145T>A
  hgvsp: ENSP00000400734.1:p.Ser49Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.235T>A
  hgvsp: ENSP00000441374.1:p.Ser79Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.793T>A
  hgvsp: ENSP00000351475.4:p.Ser265Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.793T>A
  hgvsp: ENSP00000384016.1:p.Ser265Thr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.237T>A
  hgvsp: ENSP00000395672.1:p.Ser80Thr
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5641
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6168
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser265Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/2-242077452-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077452
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077453
    reference: chr 2
allele count: 17
allele frequency: 1.403103334433806e-4
allele num: 121160
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.143dupT
  hgvsp: ENSP00000400734.1:p.Ser49ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.791dupT
  hgvsp: ENSP00000384438.3:p.Ser265ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.235dupT
  hgvsp: ENSP00000395672.1:p.Ser80ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*171dupT
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.791dupT
  hgvsp: ENSP00000351475.4:p.Ser265ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.143dupT
  hgvsp: ENSP00000443083.1:p.Ser49ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.791dupT
  hgvsp: ENSP00000234040.4:p.Ser265ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.791dupT
  hgvsp: ENSP00000384016.1:p.Ser265ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.233dupT
  hgvsp: ENSP00000441374.1:p.Ser79ValfsTer64
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10166
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5639
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16928
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser265ValfsTer64
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

2-242077454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077454
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077454
    reference: chr 2
allele count: 3
allele frequency: 2.476228209191759e-5
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.790G>A
  hgvsp: ENSP00000384016.1:p.Val264Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.790G>A
  hgvsp: ENSP00000234040.4:p.Val264Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.790G>A
  hgvsp: ENSP00000384438.3:p.Val264Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.142G>A
  hgvsp: ENSP00000443083.1:p.Val48Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.234G>A
  hgvsp: ENSP00000395672.1:p.Val79Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.142G>A
  hgvsp: ENSP00000400734.1:p.Val48Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.790G>A
  hgvsp: ENSP00000351475.4:p.Val264Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.232G>A
  hgvsp: ENSP00000441374.1:p.Val78Met
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val264Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

2-242077455-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077455
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077455
    reference: chr 2
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.789C>T
  hgvsp: ENST00000405260.1:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.789C>T
  hgvsp: ENST00000358649.4:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.141C>T
  hgvsp: ENST00000415234.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.789C>T
  hgvsp: ENST00000234040.4:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.233C>T
  hgvsp: ENST00000433589.1:c.233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.231C>T
  hgvsp: ENST00000544142.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.789C>T
  hgvsp: ENST00000403638.3:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.141C>T
  hgvsp: ENST00000539818.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*169C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3502
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr263Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

2-242077455-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077455
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077455
    reference: chr 2
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.233C>A
  hgvsp: ENSP00000395672.1:p.Tyr78Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.789C>A
  hgvsp: ENSP00000384438.3:p.Tyr263Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.789C>A
  hgvsp: ENSP00000351475.4:p.Tyr263Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*169C>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.789C>A
  hgvsp: ENSP00000384016.1:p.Tyr263Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.141C>A
  hgvsp: ENSP00000443083.1:p.Tyr47Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.789C>A
  hgvsp: ENSP00000234040.4:p.Tyr263Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.141C>A
  hgvsp: ENSP00000400734.1:p.Tyr47Ter
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.231C>A
  hgvsp: ENSP00000441374.1:p.Tyr77Ter
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5629
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16908
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr263Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-242077460-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
allele count: 2
allele frequency: 1.651991475723985e-5
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.784G>T
  hgvsp: ENSP00000384016.1:p.Gly262Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.136G>T
  hgvsp: ENSP00000443083.1:p.Gly46Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*164G>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.784G>T
  hgvsp: ENSP00000234040.4:p.Gly262Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.784G>T
  hgvsp: ENSP00000384438.3:p.Gly262Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.228G>T
  hgvsp: ENSP00000395672.1:p.Gly77Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.136G>T
  hgvsp: ENSP00000400734.1:p.Gly46Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.226G>T
  hgvsp: ENSP00000441374.1:p.Gly76Trp
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.784G>T
  hgvsp: ENSP00000351475.4:p.Gly262Trp
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly262Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

2-242077460-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
allele count: 7
allele frequency: 5.781970165033948e-5
allele num: 121066
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.784G>C
  hgvsp: ENSP00000384016.1:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.784G>C
  hgvsp: ENSP00000234040.4:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.784G>C
  hgvsp: ENSP00000351475.4:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*164G>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.136G>C
  hgvsp: ENSP00000400734.1:p.Gly46Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.228G>C
  hgvsp: ENSP00000395672.1:p.Gly77Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.226G>C
  hgvsp: ENSP00000441374.1:p.Gly76Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.136G>C
  hgvsp: ENSP00000443083.1:p.Gly46Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.784G>C
  hgvsp: ENSP00000384438.3:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly262Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

2-242077460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077460
    reference: chr 2
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.784G>A
  hgvsp: ENSP00000234040.4:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.136G>A
  hgvsp: ENSP00000443083.1:p.Gly46Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.784G>A
  hgvsp: ENSP00000384438.3:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.784G>A
  hgvsp: ENSP00000351475.4:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.784G>A
  hgvsp: ENSP00000384016.1:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.136G>A
  hgvsp: ENSP00000400734.1:p.Gly46Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.226G>A
  hgvsp: ENSP00000441374.1:p.Gly76Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.228G>A
  hgvsp: ENSP00000395672.1:p.Gly77Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*164G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly262Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

2-242077461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077461
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077461
    reference: chr 2
allele count: 1
allele frequency: 8.259275166011431e-6
allele num: 121076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.227C>T
  hgvsp: ENST00000433589.1:c.227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.783C>T
  hgvsp: ENST00000405260.1:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.225C>T
  hgvsp: ENST00000544142.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.783C>T
  hgvsp: ENST00000234040.4:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*163C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.783C>T
  hgvsp: ENST00000403638.3:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.135C>T
  hgvsp: ENST00000415234.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.135C>T
  hgvsp: ENST00000539818.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.783C>T
  hgvsp: ENST00000358649.4:c.783C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9954
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His261His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

2-242077469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077469
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077469
    reference: chr 2
allele count: 6
allele frequency: 4.960153434079561e-5
allele num: 120964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.775C>T
  hgvsp: ENSP00000234040.4:p.His259Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*155C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.775C>T
  hgvsp: ENSP00000384438.3:p.His259Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.219C>T
  hgvsp: ENSP00000395672.1:p.His74Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.127C>T
  hgvsp: ENSP00000443083.1:p.His43Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.127C>T
  hgvsp: ENSP00000400734.1:p.His43Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.775C>T
  hgvsp: ENSP00000384016.1:p.His259Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.217C>T
  hgvsp: ENSP00000441374.1:p.His73Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.775C>T
  hgvsp: ENSP00000351475.4:p.His259Tyr
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5884
  bin: 6.75e1
  variant carriers: 0
hgvs: p.His259Tyr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

2-242077476-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077476
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077476
    reference: chr 2
allele count: 1
allele frequency: 8.271845945141119e-6
allele num: 120892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.768C>G
  hgvsp: ENST00000234040.4:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*148C>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.768C>G
  hgvsp: ENST00000403638.3:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.120C>G
  hgvsp: ENST00000539818.1:c.120C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.768C>G
  hgvsp: ENST00000405260.1:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.120C>G
  hgvsp: ENST00000415234.1:c.120C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.210C>G
  hgvsp: ENST00000544142.1:c.210C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.768C>G
  hgvsp: ENST00000358649.4:c.768C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.212C>G
  hgvsp: ENST00000433589.1:c.212C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu256Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

2-242077480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077480
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077480
    reference: chr 2
allele count: 29
allele frequency: 2.400980262286395e-4
allele num: 120784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.764G>A
  hgvsp: ENSP00000234040.4:p.Ser255Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.764G>A
  hgvsp: ENSP00000351475.4:p.Ser255Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.764G>A
  hgvsp: ENSP00000384438.3:p.Ser255Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.764G>A
  hgvsp: ENSP00000384016.1:p.Ser255Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*144G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.116G>A
  hgvsp: ENSP00000443083.1:p.Ser39Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.208G>A
  hgvsp: ENSP00000395672.1:p.Ser70Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.206G>A
  hgvsp: ENSP00000441374.1:p.Ser69Asn
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.116G>A
  hgvsp: ENSP00000400734.1:p.Ser39Asn
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9481
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18317
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser255Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

2-242077481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077481
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077481
    reference: chr 2
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.763A>G
  hgvsp: ENSP00000234040.4:p.Ser255Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.115A>G
  hgvsp: ENSP00000443083.1:p.Ser39Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.763A>G
  hgvsp: ENSP00000384016.1:p.Ser255Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.115A>G
  hgvsp: ENSP00000400734.1:p.Ser39Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*143A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.763A>G
  hgvsp: ENSP00000384438.3:p.Ser255Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.763A>G
  hgvsp: ENSP00000351475.4:p.Ser255Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.205A>G
  hgvsp: ENSP00000441374.1:p.Ser69Gly
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.207A>G
  hgvsp: ENSP00000395672.1:p.Ser70Gly
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16844
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser255Gly
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

2-242077486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077486
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077486
    reference: chr 2
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*138G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.200G>A
  hgvsp: ENSP00000441374.1:p.Cys67Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.202G>A
  hgvsp: ENSP00000395672.1:p.Cys68Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.758G>A
  hgvsp: ENSP00000384016.1:p.Cys253Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.758G>A
  hgvsp: ENSP00000234040.4:p.Cys253Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.110G>A
  hgvsp: ENSP00000443083.1:p.Cys37Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.758G>A
  hgvsp: ENSP00000351475.4:p.Cys253Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.110G>A
  hgvsp: ENSP00000400734.1:p.Cys37Tyr
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.758G>A
  hgvsp: ENSP00000384438.3:p.Cys253Tyr
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16835
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Cys253Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

2-242077487-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077487
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077487
    reference: chr 2
allele count: 3
allele frequency: 2.48987451032468e-5
allele num: 120488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.109T>C
  hgvsp: ENSP00000443083.1:p.Cys37Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.757T>C
  hgvsp: ENSP00000384438.3:p.Cys253Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.109T>C
  hgvsp: ENSP00000400734.1:p.Cys37Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.199T>C
  hgvsp: ENSP00000441374.1:p.Cys67Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.757T>C
  hgvsp: ENSP00000234040.4:p.Cys253Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.757T>C
  hgvsp: ENSP00000384016.1:p.Cys253Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*137T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.201T>C
  hgvsp: ENSP00000395672.1:p.Cys68Arg
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.757T>C
  hgvsp: ENSP00000351475.4:p.Cys253Arg
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9190
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5461
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17631
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys253Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

2-242077491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077491
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077491
    reference: chr 2
allele count: 2
allele frequency: 1.663755095249979e-5
allele num: 120210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.753G>A
  hgvsp: ENST00000403638.3:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.753G>A
  hgvsp: ENST00000405260.1:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.105G>A
  hgvsp: ENST00000539818.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.105G>A
  hgvsp: ENST00000415234.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.753G>A
  hgvsp: ENST00000234040.4:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.197G>A
  hgvsp: ENST00000433589.1:c.197G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.195G>A
  hgvsp: ENST00000544142.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.753G>A
  hgvsp: ENST00000358649.4:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*133G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr251Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS

2-242077492-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077492
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077492
    reference: chr 2
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.194C>T
  hgvsp: ENSP00000441374.1:p.Thr65Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.752C>T
  hgvsp: ENSP00000384438.3:p.Thr251Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.752C>T
  hgvsp: ENSP00000384016.1:p.Thr251Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.196C>T
  hgvsp: ENSP00000395672.1:p.Thr66Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.104C>T
  hgvsp: ENSP00000443083.1:p.Thr35Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.752C>T
  hgvsp: ENSP00000351475.4:p.Thr251Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.104C>T
  hgvsp: ENSP00000400734.1:p.Thr35Met
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*132C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.752C>T
  hgvsp: ENSP00000234040.4:p.Thr251Met
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8791
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr251Met
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

2-242077496-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077496
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077496
    reference: chr 2
allele count: 37856
allele frequency: 3.168343348788939e-1
allele num: 119482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.100G>A
  hgvsp: ENSP00000400734.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.748G>A
  hgvsp: ENSP00000384438.3:p.Val250Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.748G>A
  hgvsp: ENSP00000351475.4:p.Val250Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*128G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.748G>A
  hgvsp: ENSP00000384016.1:p.Val250Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.100G>A
  hgvsp: ENSP00000443083.1:p.Val34Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.190G>A
  hgvsp: ENSP00000441374.1:p.Val64Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.192G>A
  hgvsp: ENSP00000395672.1:p.Val65Ile
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.748G>A
  hgvsp: ENSP00000234040.4:p.Val250Ile
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 440
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 1377
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 308
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 6.25e1
  variant carriers: 581
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 1.25e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.75e1
  variant carriers: 810
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 3.75e1
  variant carriers: 4629
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 2.25e1
  variant carriers: 2682
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.75e1
  variant carriers: 1101
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 3.25e1
  variant carriers: 5001
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 7.75e1
  variant carriers: 276
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 9.75e1
  variant carriers: 3380
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 4.25e1
  variant carriers: 3457
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 9.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 16727
  bin: 2.75e1
  variant carriers: 4372
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 4.75e1
  variant carriers: 2232
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.75e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 8.75e1
  variant carriers: 229
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 8.25e1
  variant carriers: 387
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 47
hgvs: p.Val250Ile
num of homozygotes: 6341
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

2-242077497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077497
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077497
    reference: chr 2
allele count: 5
allele frequency: 4.243545567192301e-5
allele num: 117826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.189C>T
  hgvsp: ENST00000544142.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*127C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.99C>T
  hgvsp: ENST00000539818.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.747C>T
  hgvsp: ENST00000405260.1:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.99C>T
  hgvsp: ENST00000415234.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.747C>T
  hgvsp: ENST00000358649.4:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.747C>T
  hgvsp: ENST00000403638.3:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.191C>T
  hgvsp: ENST00000433589.1:c.191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.747C>T
  hgvsp: ENST00000234040.4:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13146
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26192
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6898
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Thr249Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

2-242077507-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077507
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077507
    reference: chr 2
allele count: 1
allele frequency: 8.630808534143478e-6
allele num: 115864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-5T>C
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-5T>C
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 7.25e1
  variant carriers: 0
hgvs: c.742-5T>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

2-242077514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077514
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077514
    reference: chr 2
allele count: 1
allele frequency: 8.781790080089925e-6
allele num: 113872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-12C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-12C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6851
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3935
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

2-242077518-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077518
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077518
    reference: chr 2
allele count: 1
allele frequency: 8.850497397953764e-6
allele num: 112988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-16G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-16G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4602
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-242077519-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077519
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077519
    reference: chr 2
allele count: 11
allele frequency: 9.760945569418071e-5
allele num: 112694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-17C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-17C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12559
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10345
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17572
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11538
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

2-242077523-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077523
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077523
    reference: chr 2
allele count: 6
allele frequency: 5.352459455119628e-5
allele num: 112098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-21A>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-21A>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9439
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15292
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23000
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2079
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

2-242077528-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077528
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077529
    reference: chr 2
allele count: 1
allele frequency: 8.98375736668104e-6
allele num: 111312
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-27dupA
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-27dupA
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6838
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3015
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13999
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-242077542-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077542
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077542
    reference: chr 2
allele count: 1
allele frequency: 9.301806410804978e-6
allele num: 107506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-40A>G
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-40A>G
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13673
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

2-242077552-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242077552
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242077552
    reference: chr 2
allele count: 11
allele frequency: 1.066883923029174e-4
allele num: 103104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.184-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.186-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.742-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.94-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*122-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.742-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.94-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.742-50C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.742-50C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17341
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3714
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6839
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

2-242078019-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242078019
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242078019
    reference: chr 2
allele count: 4
allele frequency: 3.301964668978042e-5
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.741+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*121+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.741+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.183+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.741+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.185+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.93+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.741+50G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.93+50G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8315
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4527
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

2-242078020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242078020
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242078020
    reference: chr 2
allele count: 8
allele frequency: 6.601313661418622e-5
allele num: 121188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.741+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.185+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.183+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.741+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.93+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.93+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.741+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*121+49C>T
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.741+49C>T
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

2-242078022-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 242078022
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 242078022
    reference: chr 2
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000441374
  ensembl transcript: ENST00000544142
  gene symbol: PASK
  hgvsc: ENST00000544142.1:c.183+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000351475
  ensembl transcript: ENST00000358649
  gene symbol: PASK
  hgvsc: ENST00000358649.4:c.741+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000408506
  ensembl transcript: ENST00000437780
  gene symbol: PASK
  hgvsc: ENST00000437780.1:c.*121+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384438
  ensembl transcript: ENST00000403638
  gene symbol: PASK
  hgvsc: ENST00000403638.3:c.741+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000443083
  ensembl transcript: ENST00000539818
  gene symbol: PASK
  hgvsc: ENST00000539818.1:c.93+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000234040
  ensembl transcript: ENST00000234040
  gene symbol: PASK
  hgvsc: ENST00000234040.4:c.741+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000395672
  ensembl transcript: ENST00000433589
  gene symbol: PASK
  hgvsc: ENST00000433589.1:c.185+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000384016
  ensembl transcript: ENST00000405260
  gene symbol: PASK
  hgvsc: ENST00000405260.1:c.741+47G>A
  variant of: http://identifiers.org/hgnc/17270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115687
  ensembl protein: ENSP00000400734
  ensembl transcript: ENST00000415234
  gene symbol: PASK
  hgvsc: ENST00000415234.1:c.93+47G>A
  variant of: http://identifiers.org/hgnc/17270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9073
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4698
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21717
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5837
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4923
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.029e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

MQRankSum
type: SiteQuality
SIO_000300: 5.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

DP
type: SiteQuality
SIO_000300: 2.140307e6

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21716
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3631
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510300247689241e-5
allele num: 66212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

DP
type: SiteQuality
SIO_000300: 2.139265e6

MQRankSum
type: SiteQuality
SIO_000300: 6.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e0

FS
type: SiteQuality
SIO_000300: 3.149e0

QD
type: SiteQuality
SIO_000300: 1.359e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.83e-1

GenotypeQuality
all individuals: 4697
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3632
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4919
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11809
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533091568449683e-5
allele num: 66180
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.65141187925998e-4
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.775e0

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 2.13848e6

GenotypeQuality
all individuals: 267
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21726
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 424
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3634
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.778994719342852e-4
allele num: 10226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512950859356088e-5
allele num: 66096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.134631e6

FS
type: SiteQuality
SIO_000300: 1.404e0

QD
type: SiteQuality
SIO_000300: 1.324e1

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21726
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 378
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5758
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4687
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.435460301997078e-4
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 6.870000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.132306e6

QD
type: SiteQuality
SIO_000300: 1.305e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
all individuals: 3519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5148760831364e-5
allele num: 66012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090875867949811e-5
allele num: 16418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.132152e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.25e-1

QD
type: SiteQuality
SIO_000300: 1.533e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

FS
type: SiteQuality
SIO_000300: 3.588e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 21728
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66020
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

DP
type: SiteQuality
SIO_000300: 2.131837e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.199e1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21728
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090133982947625e-5
allele num: 16420
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.382e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-3

FS
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 2.131573e6

VQSLOD
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.204e0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5735
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21730
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515702679762338e-5
allele num: 65976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.373e0

MQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.187e-1

FS
type: SiteQuality
SIO_000300: 8.170999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

DP
type: SiteQuality
SIO_000300: 2.131714e6

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

GenotypeQuality
all individuals: 167
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516162290011523e-5
allele num: 65956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.84e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.039e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.855e0

QD
type: SiteQuality
SIO_000300: 1.189e1

FS
type: SiteQuality
SIO_000300: 3.763e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 2.131884e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.291e0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23836
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2893
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 2.560248e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.311e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3160
bin: 7.75e1
variant carriers: 16

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2706
bin: 8.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1352
bin: 8.75e1
variant carriers: 15

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2276
bin: 7.25e1
variant carriers: 13

GenotypeQuality
all individuals: 18562
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 2139
bin: 9.25e1
variant carriers: 25

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 8

GenotypeQuality
all individuals: 24851
bin: 9.75e1
variant carriers: 8577

European (Finnish)
type: Population
allele count: 303
allele frequency: 4.588128407026045e-2
allele num: 6604
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 5291
allele frequency: 7.93182022606662e-2
allele num: 66706
num of homozygotes: 231

East Asian
type: Population
allele count: 275
allele frequency: 3.178455848358761e-2
allele num: 8652
num of homozygotes: 7

African
type: Population
allele count: 410
allele frequency: 3.941549701980388e-2
allele num: 10402
num of homozygotes: 14

Other
type: Population
allele count: 63
allele frequency: 6.95364238410596e-2
allele num: 906
num of homozygotes: 2

Latino
type: Population
allele count: 340
allele frequency: 2.937111264685556e-2
allele num: 11576
num of homozygotes: 8

South Asian
type: Population
allele count: 2531
allele frequency: 1.533381800557373e-1
allele num: 16506
num of homozygotes: 197

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.29e-2

QD
type: SiteQuality
SIO_000300: 1.167e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.961e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-2

FS
type: SiteQuality
SIO_000300: 7.03e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 2.586157e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

GenotypeQuality
all individuals: 3275
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5310
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18752
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24030
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

FS
type: SiteQuality
SIO_000300: 1.2518e1

MQRankSum
type: SiteQuality
SIO_000300: -1.745e0

QD
type: SiteQuality
SIO_000300: 3.167e1

VQSLOD
type: SiteQuality
SIO_000300: -1.785e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.95e-1

DP
type: SiteQuality
SIO_000300: 2.590804e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5314
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24032
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 2.590862e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.37e0

QD
type: SiteQuality
SIO_000300: 1.417e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.052e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 5322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24031
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.295e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.107e0

DP
type: SiteQuality
SIO_000300: 2.591275e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-2

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.591511e6

VQSLOD
type: SiteQuality
SIO_000300: 3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.831e0

QD
type: SiteQuality
SIO_000300: 1.045e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

GenotypeQuality
all individuals: 5318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1458
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18857
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24029
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2859
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.045e1

VQSLOD
type: SiteQuality
SIO_000300: 3.66e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.831e0

DP
type: SiteQuality
SIO_000300: 2.591511e6

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18899
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e-1

QD
type: SiteQuality
SIO_000300: 1.155e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.393e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.591882e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.907e0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3265
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18909
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24032
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.846153846153846e-4
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.502000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.629e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.19e-1

DP
type: SiteQuality
SIO_000300: 2.591926e6

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5328
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.048940570024275e-4
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 82
allele frequency: 7.883099403960777e-3
allele num: 10402
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.046e0

QD
type: SiteQuality
SIO_000300: 1.481e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

FS
type: SiteQuality
SIO_000300: 1.311e0

DP
type: SiteQuality
SIO_000300: 2.594389e6

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

GenotypeQuality
all individuals: 18760
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2074
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25178
bin: 9.75e1
variant carriers: 10769

GenotypeQuality
all individuals: 5213
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3094
bin: 7.75e1
variant carriers: 11

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2275
bin: 7.25e1
variant carriers: 11

South Asian
type: Population
allele count: 2540
allele frequency: 1.538834363261844e-1
allele num: 16506
num of homozygotes: 196

Latino
type: Population
allele count: 466
allele frequency: 4.026265768100916e-2
allele num: 11574
num of homozygotes: 13

African
type: Population
allele count: 2692
allele frequency: 2.587963853105172e-1
allele num: 10402
num of homozygotes: 375

European (Non-Finnish)
type: Population
allele count: 5343
allele frequency: 8.007853481610264e-2
allele num: 66722
num of homozygotes: 239

East Asian
type: Population
allele count: 276
allele frequency: 3.189276635082043e-2
allele num: 8654
num of homozygotes: 7

Other
type: Population
allele count: 80
allele frequency: 8.830022075055188e-2
allele num: 906
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 304
allele frequency: 4.601877081441114e-2
allele num: 6606
num of homozygotes: 8

BaseQRankSum
type: SiteQuality
SIO_000300: -1.768e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.94e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 1.23e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

FS
type: SiteQuality
SIO_000300: 4.731e0

DP
type: SiteQuality
SIO_000300: 2.815296e6

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

DP
type: SiteQuality
SIO_000300: 2.815296e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.94e-2

FS
type: SiteQuality
SIO_000300: 4.731e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.768e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

GenotypeQuality
all individuals: 1475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6409
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17064
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 23829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.080443828016643e-3
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.358173e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.33e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17046
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2347
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.982e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.594e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.31e-1

FS
type: SiteQuality
SIO_000300: 8.975e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.356976e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

QD
type: SiteQuality
SIO_000300: 2.156e1

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17042
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-2

FS
type: SiteQuality
SIO_000300: 8.738e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 2.356973e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.031e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6418
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23899
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

MQ
type: SiteQuality
SIO_000300: 6.061e1

DP
type: SiteQuality
SIO_000300: 2.357156e6

MQRankSum
type: SiteQuality
SIO_000300: 6.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23903
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17036
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

FS
type: SiteQuality
SIO_000300: 1.559e0

QD
type: SiteQuality
SIO_000300: 2.096e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.884e0

DP
type: SiteQuality
SIO_000300: 2.356724e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1475
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2709
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17034
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.523e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.196e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.356495e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: -1.269e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 7.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeQuality
all individuals: 3024
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17027
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.450581395348837e-4
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

FS
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.341e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 2.356216e6

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1472
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

QD
type: SiteQuality
SIO_000300: 1.119e1

VQSLOD
type: SiteQuality
SIO_000300: 8.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.971e0

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 2.355507e6

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23869
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17015
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3635
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.107e1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.81e-1

DP
type: SiteQuality
SIO_000300: 2.354975e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.304e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.273e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6368
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17008
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.244280101687081e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.689e0

QD
type: SiteQuality
SIO_000300: 1.216e1

DP
type: SiteQuality
SIO_000300: 2.354393e6

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23910
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.35348e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.328e1

FS
type: SiteQuality
SIO_000300: 1.731e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16996
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6348
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2344
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 1.731e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.656e0

DP
type: SiteQuality
SIO_000300: 2.35348e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23739
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.391e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.31e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 2.348478e6

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6251
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3583
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16973
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.042e1

MQ
type: SiteQuality
SIO_000300: 6.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.564e0

DP
type: SiteQuality
SIO_000300: 2.34767e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 2.958e0

MQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.874e0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3009
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1452
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23794
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.638127577007034e-4
allele num: 16492
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.610000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

QD
type: SiteQuality
SIO_000300: 1.455e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.346355e6

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2660
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16969
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3009
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

QD
type: SiteQuality
SIO_000300: 1.455e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.610000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.346355e6

VQSLOD
type: SiteQuality
SIO_000300: -1.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

GenotypeQuality
all individuals: 3573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16971
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23723
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.498965237995261e-4
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.789510126363164e-4
allele num: 11554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.247e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.345465e6

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e-2

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16929
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e0

MQ
type: SiteQuality
SIO_000300: 6.033e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.277e1

FS
type: SiteQuality
SIO_000300: 2.949e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.343232e6

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23808
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16914
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1443
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.389e0

DP
type: SiteQuality
SIO_000300: 2.338912e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.284e0

VQSLOD
type: SiteQuality
SIO_000300: -2.608e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 6150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23769
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.822157434402332e-4
allele num: 16464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.8001800180018e-4
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73370319001387e-4
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 1.939e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

DP
type: SiteQuality
SIO_000300: 2.338359e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.65e-1

MQ
type: SiteQuality
SIO_000300: 5.997e1

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16912
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 304
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23678
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92789666473877e-4
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 7.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: -2.964e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 2.337009e6

QD
type: SiteQuality
SIO_000300: 1.108e1

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16908
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2589
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.03e-1

DP
type: SiteQuality
SIO_000300: 2.33604e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.477e0

FS
type: SiteQuality
SIO_000300: 6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.477e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

MQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 2.33604e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16888
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6062
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

FS
type: SiteQuality
SIO_000300: 1.318e0

QD
type: SiteQuality
SIO_000300: 1.076e1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.332361e6

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2281
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16888
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.050703971661013e-4
allele num: 66622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

DP
type: SiteQuality
SIO_000300: 2.332361e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

FS
type: SiteQuality
SIO_000300: 1.318e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.076e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2950
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16888
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23639
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.076e1

DP
type: SiteQuality
SIO_000300: 2.332361e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

FS
type: SiteQuality
SIO_000300: 1.318e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-2

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6058
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16878
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.73e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.785e0

DP
type: SiteQuality
SIO_000300: 2.329916e6

VQSLOD
type: SiteQuality
SIO_000300: -1.907e0

FS
type: SiteQuality
SIO_000300: 5.546e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16874
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.045437933974906e-4
allele num: 16418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.322748e6

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.412e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 4.048e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.643e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
type: SiteQuality
SIO_000300: 3.022e1

GenotypeQuality
all individuals: 580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3366
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16856
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.581e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-1

FS
type: SiteQuality
SIO_000300: 7.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-1

QD
type: SiteQuality
SIO_000300: 2.856e1

DP
type: SiteQuality
SIO_000300: 2.316696e6

GenotypeQuality
all individuals: 2263
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2880
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16870
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 5745
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3338
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502945773716484e-5
allele num: 66536
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 2.711076684740511e-3
allele num: 10328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

DP
type: SiteQuality
SIO_000300: 2.31228e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.283e1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.56e-1

GenotypeQuality
all individuals: 319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2875
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1415
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.085e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 2.309629e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.599999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.397e0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22072
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506069459923492e-5
allele num: 66398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.387e0

MQ
type: SiteQuality
SIO_000300: 5.888e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.451e-1

DP
type: SiteQuality
SIO_000300: 2.298198e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 5.314e0

QD
type: SiteQuality
SIO_000300: 1.401e1

GenotypeQuality
all individuals: 261
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16836
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 675
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5400
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.621002970470033e-4
allele num: 11446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.563e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 1.109e1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

DP
type: SiteQuality
SIO_000300: 2.297362e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 512
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16833
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.228199459592238e-4
allele num: 16284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.288241e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

QD
type: SiteQuality
SIO_000300: 1.244e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 356
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5290
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3229
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16832
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508386629660915e-5
allele num: 66296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.733e1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 2.287484e6

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.51e-1

GenotypeQuality
all individuals: 32160
bin: 9.75e1
variant carriers: 28605

GenotypeQuality
all individuals: 862
bin: 7.25e1
variant carriers: 199

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 27

GenotypeQuality
all individuals: 328
bin: 4.75e1
variant carriers: 128

GenotypeQuality
all individuals: 368
bin: 3.25e1
variant carriers: 77

GenotypeQuality
all individuals: 100
bin: 2.5e0
variant carriers: 22

GenotypeQuality
all individuals: 1127
bin: 7.75e1
variant carriers: 372

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 21

GenotypeQuality
all individuals: 17636
bin: 6.25e1
variant carriers: 251

GenotypeQuality
all individuals: 278
bin: 4.25e1
variant carriers: 101

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 156

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 24

GenotypeQuality
all individuals: 664
bin: 9.25e1
variant carriers: 412

GenotypeQuality
all individuals: 1477
bin: 2.25e1
variant carriers: 36

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 90

GenotypeQuality
all individuals: 2778
bin: 6.75e1
variant carriers: 278

European (Finnish)
type: Population
allele count: 2564
allele frequency: 3.98260329294812e-1
allele num: 6438
num of homozygotes: 488

Latino
type: Population
allele count: 2952
allele frequency: 2.60915679688881e-1
allele num: 11314
num of homozygotes: 402

African
type: Population
allele count: 1401
allele frequency: 1.369233776387803e-1
allele num: 10232
num of homozygotes: 101

Other
type: Population
allele count: 317
allele frequency: 3.56981981981982e-1
allele num: 888
num of homozygotes: 58

East Asian
type: Population
allele count: 1474
allele frequency: 1.72882946281961e-1
allele num: 8526
num of homozygotes: 109

European (Non-Finnish)
type: Population
allele count: 25043
allele frequency: 3.802690719144801e-1
allele num: 65856
num of homozygotes: 4691

South Asian
type: Population
allele count: 4105
allele frequency: 2.529578506285433e-1
allele num: 16228
num of homozygotes: 492

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.37e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.776e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

DP
type: SiteQuality
SIO_000300: 2.43236e6

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37268
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077112437688473e-5
allele num: 64996
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.556187766714083e-4
allele num: 8436
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.271e0

DP
type: SiteQuality
SIO_000300: 1.8287e6

MQRankSum
type: SiteQuality
SIO_000300: -7.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.255e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.178e1

GenotypeQuality
all individuals: 34791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6864
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 438
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.000400160064026e-4
allele num: 9996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.64e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

DP
type: SiteQuality
SIO_000300: 1.760484e6

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.048e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

GenotypeQuality
all individuals: 9651
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1112
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591292447726043e-5
allele num: 62842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.55e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: -6.363e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.312e0

FS
type: SiteQuality
SIO_000300: 2.062e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 1.669227e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
all individuals: 454
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 966
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6842
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62368
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.2453300124533e-4
allele num: 8030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
SIO_000300: 3.311e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 1.61885e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

QD
type: SiteQuality
SIO_000300: 1.146e1

GenotypeQuality
all individuals: 3398
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 487
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26107
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6848
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2782
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.787437763309077e-4
allele num: 10444
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.052123948286476e-4
allele num: 9746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.821135859608524e-5
allele num: 62226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.673360107095047e-4
allele num: 5976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15426
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.46e0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 1.491e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

DP
type: SiteQuality
SIO_000300: 1.603366e6

QD
type: SiteQuality
SIO_000300: 1.171e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.2e-2

GenotypeQuality
all individuals: 411
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4202
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12878
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6842
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 436
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.535795026375283e-4
allele num: 7962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15374
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.45e-1

DP
type: SiteQuality
SIO_000300: 1.551851e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

FS
type: SiteQuality
SIO_000300: 3.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.563e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

QD
type: SiteQuality
SIO_000300: 1.043e1

GenotypeQuality
all individuals: 222
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18645
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5555
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4198
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.625963383304608e-5
allele num: 61502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.490615e6

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 2.55e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.16e-1

GenotypeQuality
all individuals: 8489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6837
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6286
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7393
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.68123739071957e-5
allele num: 59480
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.185e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.028e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.327e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

DP
type: SiteQuality
SIO_000300: 1.362523e6

GenotypeQuality
all individuals: 1482
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8557
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6803
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11712
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3609
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 11
allele frequency: 7.632528448515126e-4
allele num: 14412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.534e0

DP
type: SiteQuality
SIO_000300: 1.334273e6

QD
type: SiteQuality
SIO_000300: 1.316e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

FS
type: SiteQuality
SIO_000300: 2.024e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

GenotypeQuality
all individuals: 35920
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.895193977996526e-4
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.76e-1

DP
type: SiteQuality
SIO_000300: 2.726712e6

QD
type: SiteQuality
SIO_000300: 9.51e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3944
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3630
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4734
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35935
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3284
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.787037037037037e-4
allele num: 10368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00318337437684e-5
allele num: 66596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.727458e6

QD
type: SiteQuality
SIO_000300: 1.182e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 4.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0