1-236700824-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700824
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700824
    reference: chr 1
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.253G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.253G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.73G>T
  hgvsp: ENSP00000405504.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.73G>T
  hgvsp: ENSP00000385999.3:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.73G>T
  hgvsp: ENSP00000342139.6:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.73G>T
  hgvsp: ENSP00000437007.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.73G>T
  hgvsp: ENSP00000434860.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.73G>T
  hgvsp: ENSP00000238181.7:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1355G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.73G>T
  hgvsp: ENSP00000355543.4:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.73G>T
  hgvsp: ENSP00000309576.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.73G>T
  hgvsp: ENSP00000435632.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.73G>T
  hgvsp: ENSP00000431398.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.73G>T
  hgvsp: ENSP00000398630.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.73G>T
  hgvsp: ENSP00000437040.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.73G>T
  hgvsp: ENSP00000410843.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.73G>T
  hgvsp: ENSP00000431884.1:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.73G>T
  hgvsp: ENSP00000408657.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.73G>T
  hgvsp: ENSP00000413278.2:p.Asp25Tyr
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp25Tyr
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-236700827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700827
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700827
    reference: chr 1
allele count: 6
allele frequency: 4.952947003467063e-5
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.252C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.76C>T
  hgvsp: ENSP00000398630.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.76C>T
  hgvsp: ENSP00000435460.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.76C>T
  hgvsp: ENSP00000405504.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.76C>T
  hgvsp: ENSP00000238181.7:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.76C>T
  hgvsp: ENSP00000435632.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.76C>T
  hgvsp: ENSP00000431884.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.76C>T
  hgvsp: ENSP00000408657.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.76C>T
  hgvsp: ENSP00000342139.6:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.76C>T
  hgvsp: ENSP00000431398.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.76C>T
  hgvsp: ENSP00000309576.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.76C>T
  hgvsp: ENSP00000413278.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.76C>T
  hgvsp: ENSP00000410843.2:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.76C>T
  hgvsp: ENSP00000437007.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.256C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1352C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.76C>T
  hgvsp: ENSP00000434860.1:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.256C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.76C>T
  hgvsp: ENSP00000385999.3:p.Gln26Ter
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln26Ter
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

1-236700836-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700836
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700836
    reference: chr 1
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.85C>G
  hgvsp: ENSP00000385999.3:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.85C>G
  hgvsp: ENSP00000413278.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.85C>G
  hgvsp: ENSP00000309576.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.85C>G
  hgvsp: ENSP00000435460.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.85C>G
  hgvsp: ENSP00000405504.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.85C>G
  hgvsp: ENSP00000434860.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.85C>G
  hgvsp: ENSP00000431398.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.85C>G
  hgvsp: ENSP00000238181.7:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.85C>G
  hgvsp: ENSP00000410843.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.85C>G
  hgvsp: ENSP00000435632.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.85C>G
  hgvsp: ENSP00000342139.6:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.85C>G
  hgvsp: ENSP00000437007.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.85C>G
  hgvsp: ENSP00000398630.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.261C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.85C>G
  hgvsp: ENSP00000431884.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.85C>G
  hgvsp: ENSP00000437040.1:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.265C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.85C>G
  hgvsp: ENSP00000355543.4:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.85C>G
  hgvsp: ENSP00000408657.2:p.Pro29Ala
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro29Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-236700839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700839
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700839
    reference: chr 1
allele count: 1
allele frequency: 8.254911672445104e-6
allele num: 121140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.88G>A
  hgvsp: ENSP00000435632.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.88G>A
  hgvsp: ENSP00000437007.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.88G>A
  hgvsp: ENSP00000405504.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.88G>A
  hgvsp: ENSP00000413278.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.88G>A
  hgvsp: ENSP00000342139.6:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.88G>A
  hgvsp: ENSP00000309576.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.88G>A
  hgvsp: ENSP00000437040.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.268G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.88G>A
  hgvsp: ENSP00000398630.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.268G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.88G>A
  hgvsp: ENSP00000238181.7:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.88G>A
  hgvsp: ENSP00000408657.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.88G>A
  hgvsp: ENSP00000434860.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.88G>A
  hgvsp: ENSP00000385999.3:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.88G>A
  hgvsp: ENSP00000431884.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.88G>A
  hgvsp: ENSP00000410843.2:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.88G>A
  hgvsp: ENSP00000435460.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.88G>A
  hgvsp: ENSP00000431398.1:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.88G>A
  hgvsp: ENSP00000355543.4:p.Gly30Arg
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly30Arg
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-236700840-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700840
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700840
    reference: chr 1
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.89G>T
  hgvsp: ENSP00000238181.7:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.89G>T
  hgvsp: ENSP00000437040.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.89G>T
  hgvsp: ENSP00000437007.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.89G>T
  hgvsp: ENSP00000408657.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.89G>T
  hgvsp: ENSP00000435460.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.89G>T
  hgvsp: ENSP00000435632.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.89G>T
  hgvsp: ENSP00000309576.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.89G>T
  hgvsp: ENSP00000410843.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1339G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.269G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.89G>T
  hgvsp: ENSP00000385999.3:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.265G>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.89G>T
  hgvsp: ENSP00000398630.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.89G>T
  hgvsp: ENSP00000342139.6:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.89G>T
  hgvsp: ENSP00000405504.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.89G>T
  hgvsp: ENSP00000413278.2:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.89G>T
  hgvsp: ENSP00000431884.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.89G>T
  hgvsp: ENSP00000434860.1:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.89G>T
  hgvsp: ENSP00000355543.4:p.Gly30Val
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly30Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-236700844-TTTGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700844
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700840
    reference: chr 1
allele count: 4
allele frequency: 3.302128221638846e-5
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.97_100delATTG
  hgvsp: ENSP00000398630.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.97_100delATTG
  hgvsp: ENSP00000437040.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.97_100delATTG
  hgvsp: ENSP00000238181.7:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.97_100delATTG
  hgvsp: ENSP00000410843.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.97_100delATTG
  hgvsp: ENSP00000342139.6:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.97_100delATTG
  hgvsp: ENSP00000437007.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.97_100delATTG
  hgvsp: ENSP00000385999.3:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.97_100delATTG
  hgvsp: ENSP00000408657.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.273_276delATTG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.97_100delATTG
  hgvsp: ENSP00000413278.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.97_100delATTG
  hgvsp: ENSP00000309576.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.97_100delATTG
  hgvsp: ENSP00000405504.2:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.97_100delATTG
  hgvsp: ENSP00000435632.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.97_100delATTG
  hgvsp: ENSP00000434860.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.97_100delATTG
  hgvsp: ENSP00000431884.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.97_100delATTG
  hgvsp: ENSP00000435460.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.97_100delATTG
  hgvsp: ENSP00000355543.4:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.97_100delATTG
  hgvsp: ENSP00000431398.1:p.Ile33Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1331_46-1328delATTG
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile33Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: TTTGA
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-236700850-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700850
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700850
    reference: chr 1
allele count: 1
allele frequency: 8.256683785524381e-6
allele num: 121114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1329T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.279T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.99T>C
  hgvsp: ENST00000481485.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.99T>C
  hgvsp: ENST00000366584.4:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.99T>C
  hgvsp: ENST00000238181.7:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.99T>C
  hgvsp: ENST00000406509.3:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.99T>C
  hgvsp: ENST00000526589.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.99T>C
  hgvsp: ENST00000416919.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.99T>C
  hgvsp: ENST00000341872.6:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.275T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.99T>C
  hgvsp: ENST00000430527.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.99T>C
  hgvsp: ENST00000442397.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.99T>C
  hgvsp: ENST00000529489.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.279T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.99T>C
  hgvsp: ENST00000526634.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.99T>C
  hgvsp: ENST00000454943.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.99T>C
  hgvsp: ENST00000323938.6:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.99T>C
  hgvsp: ENST00000352231.2:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.99T>C
  hgvsp: ENST00000525042.1:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile33Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

1-236700857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700857
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700857
    reference: chr 1
allele count: 73790
allele frequency: 6.104906097460081e-1
allele num: 120870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.106C>T
  hgvsp: ENSP00000437007.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.106C>T
  hgvsp: ENSP00000413278.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.106C>T
  hgvsp: ENSP00000405504.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1322C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.106C>T
  hgvsp: ENSP00000431884.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.106C>T
  hgvsp: ENSP00000431398.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.106C>T
  hgvsp: ENSP00000434860.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.282C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.106C>T
  hgvsp: ENSP00000435460.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.106C>T
  hgvsp: ENSP00000435632.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.106C>T
  hgvsp: ENSP00000437040.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.106C>T
  hgvsp: ENSP00000398630.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.106C>T
  hgvsp: ENSP00000238181.7:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.106C>T
  hgvsp: ENSP00000342139.6:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.106C>T
  hgvsp: ENSP00000309576.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.106C>T
  hgvsp: ENSP00000410843.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.106C>T
  hgvsp: ENSP00000355543.4:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.286C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.106C>T
  hgvsp: ENSP00000408657.2:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg36Cys
num of homozygotes: 23209
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-236700858-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700858
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700858
    reference: chr 1
allele count: 1
allele frequency: 8.371002846140968e-6
allele num: 119460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.107G>A
  hgvsp: ENSP00000238181.7:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.107G>A
  hgvsp: ENSP00000355543.4:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.107G>A
  hgvsp: ENSP00000410843.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.107G>A
  hgvsp: ENSP00000342139.6:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.107G>A
  hgvsp: ENSP00000398630.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.107G>A
  hgvsp: ENSP00000405504.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.107G>A
  hgvsp: ENSP00000435460.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.107G>A
  hgvsp: ENSP00000437007.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.107G>A
  hgvsp: ENSP00000385999.3:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.287G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.107G>A
  hgvsp: ENSP00000434860.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.107G>A
  hgvsp: ENSP00000408657.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.107G>A
  hgvsp: ENSP00000435632.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.287G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.107G>A
  hgvsp: ENSP00000413278.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1321G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.107G>A
  hgvsp: ENSP00000431398.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.107G>A
  hgvsp: ENSP00000309576.2:p.Arg36His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.283G>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg36His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

1-236700859-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700859
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700859
    reference: chr 1
allele count: 1
allele frequency: 8.375910880308233e-6
allele num: 119390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.108T>C
  hgvsp: ENST00000481485.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.108T>C
  hgvsp: ENST00000406509.3:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.108T>C
  hgvsp: ENST00000526589.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.108T>C
  hgvsp: ENST00000341872.6:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.108T>C
  hgvsp: ENST00000529489.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.108T>C
  hgvsp: ENST00000450372.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.108T>C
  hgvsp: ENST00000238181.7:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.108T>C
  hgvsp: ENST00000352231.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.284T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.108T>C
  hgvsp: ENST00000442397.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.108T>C
  hgvsp: ENST00000454943.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.108T>C
  hgvsp: ENST00000430527.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.108T>C
  hgvsp: ENST00000527974.1:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1320T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.108T>C
  hgvsp: ENST00000323938.6:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.288T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.288T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.108T>C
  hgvsp: ENST00000416919.2:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.108T>C
  hgvsp: ENST00000366584.4:c.108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg36Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

1-236700873-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700873
    reference: chr 1
allele count: 1
allele frequency: 8.543065593657628e-6
allele num: 117054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.302G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.122G>C
  hgvsp: ENSP00000385999.3:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.122G>C
  hgvsp: ENSP00000355543.4:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.122G>C
  hgvsp: ENSP00000437007.1:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.122G>C
  hgvsp: ENSP00000408657.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.122G>C
  hgvsp: ENSP00000413278.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.122G>C
  hgvsp: ENSP00000405504.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.298G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.122G>C
  hgvsp: ENSP00000435632.1:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.122G>C
  hgvsp: ENSP00000309576.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1306G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.122G>C
  hgvsp: ENSP00000238181.7:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.122G>C
  hgvsp: ENSP00000434860.1:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.122G>C
  hgvsp: ENSP00000437040.1:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.122G>C
  hgvsp: ENSP00000410843.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.302G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.122G>C
  hgvsp: ENSP00000398630.2:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.122G>C
  hgvsp: ENSP00000435460.1:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.122G>C
  hgvsp: ENSP00000342139.6:p.Ser41Thr
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser41Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

1-236700877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700877
    reference: chr 1
allele count: 3
allele frequency: 2.577673907066263e-5
allele num: 116384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.126C>T
  hgvsp: ENST00000481485.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.126C>T
  hgvsp: ENST00000442397.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.126C>T
  hgvsp: ENST00000238181.7:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.126C>T
  hgvsp: ENST00000526634.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.126C>T
  hgvsp: ENST00000527974.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.126C>T
  hgvsp: ENST00000366584.4:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.126C>T
  hgvsp: ENST00000454943.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.126C>T
  hgvsp: ENST00000416919.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.126C>T
  hgvsp: ENST00000406509.3:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1302C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.306C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.126C>T
  hgvsp: ENST00000529489.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.126C>T
  hgvsp: ENST00000430527.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.126C>T
  hgvsp: ENST00000450372.2:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.302C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.126C>T
  hgvsp: ENST00000526589.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.126C>T
  hgvsp: ENST00000341872.6:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.126C>T
  hgvsp: ENST00000525042.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.306C>T
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp42Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

1-236700878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700878
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700878
    reference: chr 1
allele count: 40
allele frequency: 3.440741823937241e-4
allele num: 116254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.127G>A
  hgvsp: ENSP00000408657.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.127G>A
  hgvsp: ENSP00000398630.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.127G>A
  hgvsp: ENSP00000405504.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.127G>A
  hgvsp: ENSP00000385999.3:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.127G>A
  hgvsp: ENSP00000435632.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.127G>A
  hgvsp: ENSP00000431884.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.127G>A
  hgvsp: ENSP00000435460.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.127G>A
  hgvsp: ENSP00000410843.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.127G>A
  hgvsp: ENSP00000309576.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.127G>A
  hgvsp: ENSP00000437007.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.127G>A
  hgvsp: ENSP00000434860.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.127G>A
  hgvsp: ENSP00000238181.7:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.303G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.127G>A
  hgvsp: ENSP00000413278.2:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.307G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.127G>A
  hgvsp: ENSP00000431398.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.307G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.127G>A
  hgvsp: ENSP00000355543.4:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.127G>A
  hgvsp: ENSP00000437040.1:p.Ala43Thr
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala43Thr
num of homozygotes: 1
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

1-236700879-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700879
    reference: chr 1
allele count: 1
allele frequency: 8.61341280642216e-6
allele num: 116098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.128C>G
  hgvsp: ENSP00000355543.4:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.128C>G
  hgvsp: ENSP00000405504.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.128C>G
  hgvsp: ENSP00000437007.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.128C>G
  hgvsp: ENSP00000413278.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.304C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.128C>G
  hgvsp: ENSP00000408657.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.128C>G
  hgvsp: ENSP00000434860.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.128C>G
  hgvsp: ENSP00000342139.6:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.128C>G
  hgvsp: ENSP00000309576.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.128C>G
  hgvsp: ENSP00000435632.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.128C>G
  hgvsp: ENSP00000238181.7:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.128C>G
  hgvsp: ENSP00000431398.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1300C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.128C>G
  hgvsp: ENSP00000398630.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.128C>G
  hgvsp: ENSP00000431884.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.308C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.128C>G
  hgvsp: ENSP00000437040.1:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.128C>G
  hgvsp: ENSP00000410843.2:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.128C>G
  hgvsp: ENSP00000385999.3:p.Ala43Gly
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala43Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-236700880-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700880
    reference: chr 1
allele count: 1
allele frequency: 8.62931897414656e-6
allele num: 115884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.309A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.129A>G
  hgvsp: ENST00000526589.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.129A>G
  hgvsp: ENST00000442397.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.129A>G
  hgvsp: ENST00000450372.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.129A>G
  hgvsp: ENST00000525042.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.129A>G
  hgvsp: ENST00000406509.3:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.309A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.129A>G
  hgvsp: ENST00000430527.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.129A>G
  hgvsp: ENST00000481485.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.129A>G
  hgvsp: ENST00000454943.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437007
  ensembl transcript: ENST00000529489
  gene symbol: LGALS8
  hgvsc: ENST00000529489.1:c.129A>G
  hgvsp: ENST00000529489.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.129A>G
  hgvsp: ENST00000323938.6:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.129A>G
  hgvsp: ENST00000352231.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.129A>G
  hgvsp: ENST00000341872.6:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.129A>G
  hgvsp: ENST00000238181.7:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.129A>G
  hgvsp: ENST00000366584.4:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1299A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.129A>G
  hgvsp: ENST00000416919.2:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.305A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala43Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

1-236700881-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700881
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700881
    reference: chr 1
allele count: 3
allele frequency: 2.589466052100057e-5
allele num: 115854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.130G>C
  hgvsp: ENSP00000435632.1:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.130G>C
  hgvsp: ENSP00000238181.7:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.130G>C
  hgvsp: ENSP00000437040.1:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.130G>C
  hgvsp: ENSP00000413278.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.130G>C
  hgvsp: ENSP00000398630.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.130G>C
  hgvsp: ENSP00000309576.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.130G>C
  hgvsp: ENSP00000342139.6:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.306G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.130G>C
  hgvsp: ENSP00000434860.1:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.130G>C
  hgvsp: ENSP00000410843.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.130G>C
  hgvsp: ENSP00000355543.4:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.130G>C
  hgvsp: ENSP00000435460.1:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.130G>C
  hgvsp: ENSP00000405504.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.310G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.130G>C
  hgvsp: ENSP00000385999.3:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.130G>C
  hgvsp: ENSP00000408657.2:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.310G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1298G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.130G>C
  hgvsp: ENSP00000431398.1:p.Asp44His
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp44His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-236700889-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700889
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700889
    reference: chr 1
allele count: 1
allele frequency: 8.731489242805253e-6
allele num: 114528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+4A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.134+4A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

1-236700894-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700894
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700894
    reference: chr 1
allele count: 1
allele frequency: 8.827995338818462e-6
allele num: 113276
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1285A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+9A>T
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

1-236700895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700895
    reference: chr 1
allele count: 1
allele frequency: 8.831113780069943e-6
allele num: 113236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1284C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+10C>T
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS

1-236700903-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700903
    reference: chr 1
allele count: 3
allele frequency: 2.69386875471427e-5
allele num: 111364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1276A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+18A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

1-236700914-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700914
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700914
    reference: chr 1
allele count: 1
allele frequency: 9.184085816097865e-6
allele num: 108884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1265A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+29A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+29A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

1-236700922-GCTGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700922
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700918
    reference: chr 1
allele count: 3
allele frequency: 2.814628562850656e-5
allele num: 106586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+40_314+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+40_310+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1254_46-1251delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+40_314+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+40_134+43delGTCT
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: GCTGT
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

1-236700936-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236700936
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236700936
    reference: chr 1
allele count: 822
allele frequency: 8.103152540367895e-3
allele num: 101442
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.314+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.310+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-1243A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.134+51A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.314+51A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 33
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/1-236702136-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702136
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702136
    reference: chr 1
allele count: 1
allele frequency: 8.305096006909839e-6
allele num: 120408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-124C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-50C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-43C>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6537
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

1-236702139-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702139
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702139
    reference: chr 1
allele count: 1
allele frequency: 8.299306178003518e-6
allele num: 120492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-121T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-47T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-40T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-40T>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

1-236702146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702146
    reference: chr 1
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-40A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-114A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-33A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-33A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

1-236702151-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702151
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702151
    reference: chr 1
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-109T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-35T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-28T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-28T>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

1-236702151-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702151
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702151
    reference: chr 1
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-109T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-35T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-28T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-28T>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

1-236702153-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702153
    reference: chr 1
allele count: 73534
allele frequency: 6.084632442988118e-1
allele num: 120852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-33G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-26G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-107G>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 454
genotype quality: GenotypeQuality
num of homozygotes: 23079
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-236702156-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702156
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702156
    reference: chr 1
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-30C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-104C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-23C>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-236702157-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702157
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702157
    reference: chr 1
allele count: 7
allele frequency: 5.77072101037081e-5
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-29C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-103C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-22C>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-22C>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-236702160-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702160
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702160
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 121306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-26T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-19T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-100T>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum

1-236702162-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702162
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702162
    reference: chr 1
allele count: 7
allele frequency: 5.769959939992417e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-98T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-24T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-17T>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6031
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

1-236702171-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702171
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702171
    reference: chr 1
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-89T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-15T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-8T>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.135-8T>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-236702176-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702176
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702176
    reference: chr 1
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-10T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-3T>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.135-3T>C
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-236702177-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702177
    reference: chr 1
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-83A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.46-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.315-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.311-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.315-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.135-2A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.135-9A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.135-2A>G
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-236702196-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702196
    reference: chr 1
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.152A>G
  hgvsp: ENSP00000435632.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.152A>G
  hgvsp: ENSP00000342139.6:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.332A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.63A>G
  hgvsp: ENST00000434231.2:c.63A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.332A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.152A>G
  hgvsp: ENSP00000398630.2:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-64A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.145A>G
  hgvsp: ENSP00000413278.2:p.Arg49Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.152A>G
  hgvsp: ENSP00000437040.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.152A>G
  hgvsp: ENSP00000309576.2:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.152A>G
  hgvsp: ENSP00000405504.2:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.152A>G
  hgvsp: ENSP00000238181.7:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.152A>G
  hgvsp: ENSP00000431398.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.152A>G
  hgvsp: ENSP00000435460.1:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.152A>G
  hgvsp: ENSP00000408657.2:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.152A>G
  hgvsp: ENSP00000385999.3:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.152A>G
  hgvsp: ENSP00000410843.2:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.328A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.152A>G
  hgvsp: ENSP00000355543.4:p.Gln51Arg
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln51Arg
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-236702206-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702206
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702204
    reference: chr 1
allele count: 7
allele frequency: 5.772434153018983e-5
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.163_164delAG
  hgvsp: ENSP00000309576.2:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.163_164delAG
  hgvsp: ENSP00000408657.2:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.163_164delAG
  hgvsp: ENSP00000435460.1:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.163_164delAG
  hgvsp: ENSP00000431398.1:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.156_157delAG
  hgvsp: ENSP00000413278.2:p.Ala53MetfsTer?
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.163_164delAG
  hgvsp: ENSP00000238181.7:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.163_164delAG
  hgvsp: ENSP00000342139.6:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.163_164delAG
  hgvsp: ENSP00000437040.1:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.163_164delAG
  hgvsp: ENSP00000398630.2:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.163_164delAG
  hgvsp: ENSP00000435632.1:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.163_164delAG
  hgvsp: ENSP00000355543.4:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.163_164delAG
  hgvsp: ENSP00000405504.2:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.74_75delAG
  hgvsp: ENSP00000407428.2:p.Gln25ProfsTer2
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.343_344delAG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.163_164delAG
  hgvsp: ENSP00000431884.1:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-53_135-52delAG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.163_164delAG
  hgvsp: ENSP00000410843.2:p.Ser55HisfsTer29
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.339_340delAG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.343_344delAG
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser55HisfsTer29
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: CAG
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-236702209-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702209
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702209
    reference: chr 1
allele count: 66020
allele frequency: 5.463422707712678e-1
allele num: 120840
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.165C>T
  hgvsp: ENST00000366584.4:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.165C>T
  hgvsp: ENST00000526589.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.165C>T
  hgvsp: ENST00000527974.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.165C>T
  hgvsp: ENST00000341872.6:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.76C>T
  hgvsp: ENSP00000407428.2:p.His26Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.165C>T
  hgvsp: ENST00000481485.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.165C>T
  hgvsp: ENST00000526634.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.165C>T
  hgvsp: ENST00000352231.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.165C>T
  hgvsp: ENST00000430527.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-51C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.158C>T
  hgvsp: ENSP00000413278.2:p.Ala53Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.165C>T
  hgvsp: ENST00000238181.7:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.345C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.345C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.165C>T
  hgvsp: ENST00000525042.1:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.165C>T
  hgvsp: ENST00000416919.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.165C>T
  hgvsp: ENST00000406509.3:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.165C>T
  hgvsp: ENST00000454943.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.165C>T
  hgvsp: ENST00000450372.2:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala53Val
num of homozygotes: 18793
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

1-236702210-A-AGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702210
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702213
    reference: chr 1
allele count: 7
allele frequency: 5.79287972326586e-5
allele num: 120838
alternate allele: AGTG
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.166_167insGTG
  hgvsp: ENSP00000431398.1:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.159_160insGTG
  hgvsp: ENSP00000413278.2:p.53_54insVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.166_167insGTG
  hgvsp: ENSP00000435632.1:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.166_167insGTG
  hgvsp: ENSP00000431884.1:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.166_167insGTG
  hgvsp: ENSP00000385999.3:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-50_135-49insGTG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.166_167insGTG
  hgvsp: ENSP00000238181.7:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.166_167insGTG
  hgvsp: ENSP00000435460.1:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.346_347insGTG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.77_78insGTG
  hgvsp: ENSP00000407428.2:p.His26delinsGlnCys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.346_347insGTG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.166_167insGTG
  hgvsp: ENSP00000309576.2:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.166_167insGTG
  hgvsp: ENSP00000410843.2:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.166_167insGTG
  hgvsp: ENSP00000355543.4:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.166_167insGTG
  hgvsp: ENSP00000408657.2:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.166_167insGTG
  hgvsp: ENSP00000342139.6:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.166_167insGTG
  hgvsp: ENSP00000398630.2:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.342_343insGTG
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.166_167insGTG
  hgvsp: ENSP00000405504.2:p.Met56delinsSerVal
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.53_54insVal
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-236702210-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702210
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702210
    reference: chr 1
allele count: 81612
allele frequency: 6.753835713931048e-1
allele num: 120838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.159A>G
  hgvsp: ENST00000442397.2:c.159A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.166A>G
  hgvsp: ENSP00000435632.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.166A>G
  hgvsp: ENSP00000238181.7:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.166A>G
  hgvsp: ENSP00000385999.3:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.166A>G
  hgvsp: ENSP00000431398.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.166A>G
  hgvsp: ENSP00000437040.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.166A>G
  hgvsp: ENSP00000405504.2:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.77A>G
  hgvsp: ENSP00000407428.2:p.His26Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.166A>G
  hgvsp: ENSP00000431884.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.166A>G
  hgvsp: ENSP00000408657.2:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.166A>G
  hgvsp: ENSP00000355543.4:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.346A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.166A>G
  hgvsp: ENSP00000398630.2:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.166A>G
  hgvsp: ENSP00000342139.6:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.346A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.166A>G
  hgvsp: ENSP00000410843.2:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.166A>G
  hgvsp: ENSP00000435460.1:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.342A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.166A>G
  hgvsp: ENSP00000309576.2:p.Met56Val
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Met56Val
num of homozygotes: 27883
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-236702211-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702211
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702211
    reference: chr 1
allele count: 1
allele frequency: 8.506005239699228e-6
allele num: 117564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.167T>G
  hgvsp: ENSP00000405504.2:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.78T>G
  hgvsp: ENSP00000407428.2:p.His26Gln
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.167T>G
  hgvsp: ENSP00000385999.3:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.167T>G
  hgvsp: ENSP00000435632.1:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.167T>G
  hgvsp: ENSP00000398630.2:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.167T>G
  hgvsp: ENSP00000309576.2:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.347T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.160T>G
  hgvsp: ENSP00000413278.2:p.Ter54GlyextTer25
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.167T>G
  hgvsp: ENSP00000431398.1:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.167T>G
  hgvsp: ENSP00000342139.6:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.167T>G
  hgvsp: ENSP00000435460.1:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.167T>G
  hgvsp: ENSP00000238181.7:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.167T>G
  hgvsp: ENSP00000410843.2:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-49T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.167T>G
  hgvsp: ENSP00000408657.2:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.167T>G
  hgvsp: ENSP00000431884.1:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.167T>G
  hgvsp: ENSP00000355543.4:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.347T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.167T>G
  hgvsp: ENSP00000437040.1:p.Met56Arg
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ter54GlyextTer25
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/1-236702215-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702215
    reference: chr 1
allele count: 7
allele frequency: 5.808357396528262e-5
allele num: 120516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.171A>C
  hgvsp: ENSP00000309576.2:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.351A>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.171A>C
  hgvsp: ENSP00000408657.2:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.82A>C
  hgvsp: ENSP00000407428.2:p.Thr28Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.171A>C
  hgvsp: ENSP00000355543.4:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.171A>C
  hgvsp: ENSP00000342139.6:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.171A>C
  hgvsp: ENSP00000435460.1:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*2A>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.171A>C
  hgvsp: ENSP00000405504.2:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.171A>C
  hgvsp: ENSP00000410843.2:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.171A>C
  hgvsp: ENSP00000435632.1:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.171A>C
  hgvsp: ENSP00000437040.1:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.171A>C
  hgvsp: ENSP00000238181.7:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.171A>C
  hgvsp: ENSP00000385999.3:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.171A>C
  hgvsp: ENSP00000398630.2:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.171A>C
  hgvsp: ENSP00000431398.1:p.Lys57Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.347A>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.351A>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-45A>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys57Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-236702219-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702219
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702219
    reference: chr 1
allele count: 6
allele frequency: 5.064744314824507e-5
allele num: 118466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.175C>G
  hgvsp: ENSP00000398630.2:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.175C>G
  hgvsp: ENSP00000410843.2:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.175C>G
  hgvsp: ENSP00000238181.7:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.175C>G
  hgvsp: ENSP00000309576.2:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-41C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.86C>G
  hgvsp: ENSP00000407428.2:p.Ser29Trp
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.175C>G
  hgvsp: ENSP00000405504.2:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*6C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.175C>G
  hgvsp: ENSP00000435632.1:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.175C>G
  hgvsp: ENSP00000342139.6:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.175C>G
  hgvsp: ENSP00000431884.1:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.175C>G
  hgvsp: ENSP00000385999.3:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.175C>G
  hgvsp: ENSP00000408657.2:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.355C>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.175C>G
  hgvsp: ENSP00000437040.1:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.175C>G
  hgvsp: ENSP00000355543.4:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.175C>G
  hgvsp: ENSP00000435460.1:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.175C>G
  hgvsp: ENSP00000431398.1:p.Arg59Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.351C>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg59Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

1-236702219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702219
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702219
    reference: chr 1
allele count: 8
allele frequency: 6.752992419766009e-5
allele num: 118466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.175C>T
  hgvsp: ENSP00000435632.1:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.175C>T
  hgvsp: ENSP00000385999.3:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.175C>T
  hgvsp: ENSP00000355543.4:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.175C>T
  hgvsp: ENSP00000405504.2:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.175C>T
  hgvsp: ENSP00000410843.2:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.86C>T
  hgvsp: ENSP00000407428.2:p.Ser29Leu
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.355C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.175C>T
  hgvsp: ENSP00000309576.2:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.175C>T
  hgvsp: ENSP00000238181.7:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.175C>T
  hgvsp: ENSP00000398630.2:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.175C>T
  hgvsp: ENSP00000435460.1:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*6C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.175C>T
  hgvsp: ENSP00000342139.6:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-41C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.355C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.175C>T
  hgvsp: ENSP00000437040.1:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.175C>T
  hgvsp: ENSP00000431884.1:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.175C>T
  hgvsp: ENSP00000431398.1:p.Arg59Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.351C>T
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg59Ter
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

1-236702220-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702220
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702220
    reference: chr 1
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.176G>C
  hgvsp: ENSP00000437040.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.176G>C
  hgvsp: ENSP00000309576.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.176G>C
  hgvsp: ENSP00000238181.7:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.352G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.176G>C
  hgvsp: ENSP00000342139.6:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.176G>C
  hgvsp: ENSP00000435632.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.176G>C
  hgvsp: ENSP00000435460.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-40G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.176G>C
  hgvsp: ENSP00000385999.3:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.176G>C
  hgvsp: ENSP00000405504.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.176G>C
  hgvsp: ENSP00000431884.1:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.176G>C
  hgvsp: ENSP00000355543.4:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.87G>C
  hgvsp: ENST00000434231.2:c.87G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.176G>C
  hgvsp: ENSP00000398630.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.176G>C
  hgvsp: ENSP00000408657.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*7G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.356G>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.176G>C
  hgvsp: ENSP00000410843.2:p.Arg59Pro
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.356G>C
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg59Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

1-236702224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702224
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702224
    reference: chr 1
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.180C>T
  hgvsp: ENST00000454943.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.180C>T
  hgvsp: ENST00000366584.4:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.180C>T
  hgvsp: ENST00000525042.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.180C>T
  hgvsp: ENST00000238181.7:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.180C>T
  hgvsp: ENST00000430527.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.91C>T
  hgvsp: ENSP00000407428.2:p.Arg31Ter
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.180C>T
  hgvsp: ENST00000406509.3:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.360C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.180C>T
  hgvsp: ENST00000352231.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.180C>T
  hgvsp: ENST00000416919.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.180C>T
  hgvsp: ENST00000481485.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.180C>T
  hgvsp: ENST00000527974.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*11C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.180C>T
  hgvsp: ENST00000450372.2:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.180C>T
  hgvsp: ENST00000526589.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-36C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.180C>T
  hgvsp: ENST00000526634.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.356C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.180C>T
  hgvsp: ENST00000341872.6:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg31Ter
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

1-236702225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702225
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702225
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.181G>A
  hgvsp: ENSP00000431884.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.181G>A
  hgvsp: ENSP00000398630.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.181G>A
  hgvsp: ENSP00000435632.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.181G>A
  hgvsp: ENSP00000238181.7:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.181G>A
  hgvsp: ENSP00000435460.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.181G>A
  hgvsp: ENSP00000408657.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.181G>A
  hgvsp: ENSP00000405504.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.181G>A
  hgvsp: ENSP00000309576.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.181G>A
  hgvsp: ENSP00000355543.4:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.181G>A
  hgvsp: ENSP00000410843.2:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.181G>A
  hgvsp: ENSP00000385999.3:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.361G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.92G>A
  hgvsp: ENSP00000407428.2:p.Arg31Gln
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.181G>A
  hgvsp: ENSP00000437040.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.181G>A
  hgvsp: ENSP00000431398.1:p.Asp61Asn
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.361G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-35G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.357G>A
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp61Asn
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-236702227-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702227
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.94T>C
  hgvsp: ENSP00000407428.2:p.Cys32Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*14T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-33T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.183T>C
  hgvsp: ENST00000366584.4:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.183T>C
  hgvsp: ENST00000527974.1:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.359T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.183T>C
  hgvsp: ENST00000526634.1:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.183T>C
  hgvsp: ENST00000341872.6:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.183T>C
  hgvsp: ENST00000430527.2:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.183T>C
  hgvsp: ENST00000238181.7:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.363T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.183T>C
  hgvsp: ENST00000525042.1:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.183T>C
  hgvsp: ENST00000481485.1:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.183T>C
  hgvsp: ENST00000526589.1:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.183T>C
  hgvsp: ENST00000406509.3:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.363T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.183T>C
  hgvsp: ENST00000454943.2:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.183T>C
  hgvsp: ENST00000416919.2:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.183T>C
  hgvsp: ENST00000352231.2:c.183T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys32Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-236702246-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702246
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.202C>T
  hgvsp: ENSP00000408657.2:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*33C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-14C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.202C>T
  hgvsp: ENSP00000431884.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.202C>T
  hgvsp: ENSP00000342139.6:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.202C>T
  hgvsp: ENSP00000437040.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.113C>T
  hgvsp: ENSP00000407428.2:p.Ser38Phe
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.202C>T
  hgvsp: ENSP00000435632.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.202C>T
  hgvsp: ENSP00000385999.3:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.382C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.382C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.202C>T
  hgvsp: ENSP00000238181.7:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.202C>T
  hgvsp: ENSP00000405504.2:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.378C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.202C>T
  hgvsp: ENSP00000398630.2:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.202C>T
  hgvsp: ENSP00000355543.4:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.202C>T
  hgvsp: ENSP00000410843.2:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.202C>T
  hgvsp: ENSP00000431398.1:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.202C>T
  hgvsp: ENSP00000309576.2:p.Pro68Ser
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro68Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

1-236702249-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702249
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702249
    reference: chr 1
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.116C>T
  hgvsp: ENSP00000407428.2:p.Ser39Leu
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.205C>T
  hgvsp: ENSP00000385999.3:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.205C>T
  hgvsp: ENSP00000405504.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.205C>T
  hgvsp: ENSP00000238181.7:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.205C>T
  hgvsp: ENSP00000410843.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.205C>T
  hgvsp: ENSP00000431398.1:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.205C>T
  hgvsp: ENSP00000431884.1:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.205C>T
  hgvsp: ENSP00000437040.1:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.205C>T
  hgvsp: ENSP00000342139.6:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.205C>T
  hgvsp: ENSP00000408657.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.205C>T
  hgvsp: ENSP00000435460.1:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.205C>T
  hgvsp: ENSP00000435632.1:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.385C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.205C>T
  hgvsp: ENSP00000398630.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.205C>T
  hgvsp: ENSP00000309576.2:p.Arg69Cys
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.385C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.381C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*36C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-11C>T
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg69Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

1-236702250-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702250
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702250
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.206G>A
  hgvsp: ENSP00000435460.1:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*37G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.206G>A
  hgvsp: ENSP00000342139.6:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.206G>A
  hgvsp: ENSP00000385999.3:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.382G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.206G>A
  hgvsp: ENSP00000410843.2:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.386G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.206G>A
  hgvsp: ENSP00000435632.1:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.206G>A
  hgvsp: ENSP00000437040.1:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.206G>A
  hgvsp: ENSP00000355543.4:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.206G>A
  hgvsp: ENSP00000238181.7:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.206G>A
  hgvsp: ENSP00000431884.1:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.386G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.206G>A
  hgvsp: ENSP00000405504.2:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.206G>A
  hgvsp: ENSP00000309576.2:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.135-10G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.206G>A
  hgvsp: ENSP00000431398.1:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.117G>A
  hgvsp: ENST00000434231.2:c.117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.206G>A
  hgvsp: ENSP00000408657.2:p.Arg69His
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg69His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-236702262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702262
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.218C>T
  hgvsp: ENSP00000355543.4:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.218C>T
  hgvsp: ENSP00000435632.1:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.218C>T
  hgvsp: ENSP00000431398.1:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.218C>T
  hgvsp: ENSP00000410843.2:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.218C>T
  hgvsp: ENSP00000238181.7:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.218C>T
  hgvsp: ENSP00000405504.2:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.398C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*49C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.137C>T
  hgvsp: ENSP00000434860.1:p.Ala46Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.218C>T
  hgvsp: ENSP00000342139.6:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.218C>T
  hgvsp: ENSP00000385999.3:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.218C>T
  hgvsp: ENSP00000398630.2:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.218C>T
  hgvsp: ENSP00000437040.1:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.218C>T
  hgvsp: ENSP00000435460.1:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.218C>T
  hgvsp: ENSP00000309576.2:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.218C>T
  hgvsp: ENSP00000431884.1:p.Ala73Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.394C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.398C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.129C>T
  hgvsp: ENST00000434231.2:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala73Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

1-236702263-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702263
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702263
    reference: chr 1
allele count: 4
allele frequency: 3.294784356363876e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.219C>T
  hgvsp: ENST00000416919.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.399C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.219C>T
  hgvsp: ENST00000526634.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.219C>T
  hgvsp: ENST00000481485.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.219C>T
  hgvsp: ENST00000341872.6:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.399C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.219C>T
  hgvsp: ENST00000450372.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.219C>T
  hgvsp: ENST00000430527.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.138C>T
  hgvsp: ENST00000323938.6:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.130C>T
  hgvsp: ENSP00000407428.2:p.Arg44Trp
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.219C>T
  hgvsp: ENST00000238181.7:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.219C>T
  hgvsp: ENST00000454943.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.219C>T
  hgvsp: ENST00000352231.2:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.219C>T
  hgvsp: ENST00000525042.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.219C>T
  hgvsp: ENST00000406509.3:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.395C>T
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.219C>T
  hgvsp: ENST00000526589.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.219C>T
  hgvsp: ENST00000527974.1:c.219C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*50C>T
  variant of: http://identifiers.org/hgnc/6569
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg44Trp
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-236702264-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702264
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702264
    reference: chr 1
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.400G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.396G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.220G>A
  hgvsp: ENSP00000437040.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.220G>A
  hgvsp: ENSP00000342139.6:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.220G>A
  hgvsp: ENSP00000385999.3:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.139G>A
  hgvsp: ENSP00000434860.1:p.Gly47Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.220G>A
  hgvsp: ENSP00000435632.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.220G>A
  hgvsp: ENSP00000431884.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.220G>A
  hgvsp: ENSP00000431398.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.220G>A
  hgvsp: ENSP00000435460.1:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.220G>A
  hgvsp: ENSP00000408657.2:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*51G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.131G>A
  hgvsp: ENSP00000407428.2:p.Arg44Gln
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.220G>A
  hgvsp: ENSP00000398630.2:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.220G>A
  hgvsp: ENSP00000238181.7:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.220G>A
  hgvsp: ENSP00000405504.2:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.400G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.220G>A
  hgvsp: ENSP00000309576.2:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.220G>A
  hgvsp: ENSP00000355543.4:p.Gly74Ser
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly74Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

1-236702270-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702270
    reference: chr 1
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.226A>G
  hgvsp: ENSP00000342139.6:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.406A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.226A>G
  hgvsp: ENSP00000435460.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.402A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.226A>G
  hgvsp: ENSP00000408657.2:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.226A>G
  hgvsp: ENSP00000355543.4:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.406A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.226A>G
  hgvsp: ENSP00000238181.7:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.226A>G
  hgvsp: ENSP00000437040.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.226A>G
  hgvsp: ENSP00000431884.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*57A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.145A>G
  hgvsp: ENSP00000434860.1:p.Ile49Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.226A>G
  hgvsp: ENSP00000435632.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.226A>G
  hgvsp: ENSP00000410843.2:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.226A>G
  hgvsp: ENSP00000405504.2:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.137A>G
  hgvsp: ENSP00000407428.2:p.His46Arg
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.226A>G
  hgvsp: ENSP00000431398.1:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.226A>G
  hgvsp: ENSP00000385999.3:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.226A>G
  hgvsp: ENSP00000309576.2:p.Ile76Val
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile76Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

1-236702275-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702275
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702275
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.231T>C
  hgvsp: ENST00000526589.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.231T>C
  hgvsp: ENST00000416919.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.231T>C
  hgvsp: ENST00000526634.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.231T>C
  hgvsp: ENST00000527974.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.142T>C
  hgvsp: ENST00000434231.2:c.142T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.231T>C
  hgvsp: ENST00000525042.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.231T>C
  hgvsp: ENST00000481485.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.231T>C
  hgvsp: ENST00000238181.7:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.231T>C
  hgvsp: ENST00000341872.6:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.231T>C
  hgvsp: ENST00000352231.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*62T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.411T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.411T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.150T>C
  hgvsp: ENST00000323938.6:c.150T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.407T>C
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.231T>C
  hgvsp: ENST00000454943.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.231T>C
  hgvsp: ENST00000366584.4:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.231T>C
  hgvsp: ENST00000450372.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.231T>C
  hgvsp: ENST00000430527.2:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val77Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD

1-236702277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702277
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702277
    reference: chr 1
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.233G>A
  hgvsp: ENSP00000238181.7:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.233G>A
  hgvsp: ENSP00000435632.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.233G>A
  hgvsp: ENSP00000431398.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.233G>A
  hgvsp: ENSP00000398630.2:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.233G>A
  hgvsp: ENSP00000435460.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.413G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.233G>A
  hgvsp: ENSP00000431884.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.409G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.152G>A
  hgvsp: ENSP00000434860.1:p.Cys51Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.233G>A
  hgvsp: ENSP00000408657.2:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.233G>A
  hgvsp: ENSP00000437040.1:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.233G>A
  hgvsp: ENSP00000342139.6:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*64G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.144G>A
  hgvsp: ENST00000434231.2:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.413G>A
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.233G>A
  hgvsp: ENSP00000405504.2:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.233G>A
  hgvsp: ENSP00000385999.3:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.233G>A
  hgvsp: ENSP00000309576.2:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.233G>A
  hgvsp: ENSP00000355543.4:p.Cys78Tyr
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys78Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

1-236702280-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702280
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702280
    reference: chr 1
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.236A>G
  hgvsp: ENSP00000431398.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.236A>G
  hgvsp: ENSP00000355543.4:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.236A>G
  hgvsp: ENSP00000309576.2:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.236A>G
  hgvsp: ENSP00000405504.2:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.236A>G
  hgvsp: ENSP00000435632.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.236A>G
  hgvsp: ENSP00000435460.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*67A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.236A>G
  hgvsp: ENSP00000398630.2:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.147A>G
  hgvsp: ENST00000434231.2:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.236A>G
  hgvsp: ENSP00000342139.6:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000434860
  ensembl transcript: ENST00000323938
  gene symbol: LGALS8
  hgvsc: ENST00000323938.6:c.155A>G
  hgvsp: ENSP00000434860.1:p.Asn52Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.416A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.236A>G
  hgvsp: ENSP00000385999.3:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.416A>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.236A>G
  hgvsp: ENSP00000238181.7:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.236A>G
  hgvsp: ENSP00000437040.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.236A>G
  hgvsp: ENSP00000431884.1:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.236A>G
  hgvsp: ENSP00000410843.2:p.Asn79Ser
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.412A>G
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asn79Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-236702300-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702300
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702300
    reference: chr 1
allele count: 4
allele frequency: 3.295435821387378e-5
allele num: 121380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435632
  ensembl transcript: ENST00000481485
  gene symbol: LGALS8
  hgvsc: ENST00000481485.1:c.256T>G
  hgvsp: ENSP00000435632.1:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000407428
  ensembl transcript: ENST00000434231
  gene symbol: LGALS8
  hgvsc: ENST00000434231.2:c.*5T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000528782
  gene symbol: LGALS8
  hgvsc: ENST00000528782.1:n.436T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000413278
  ensembl transcript: ENST00000442397
  gene symbol: LGALS8
  hgvsc: ENST00000442397.2:c.*87T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000408657
  ensembl transcript: ENST00000450372
  gene symbol: LGALS8
  hgvsc: ENST00000450372.2:c.256T>G
  hgvsp: ENSP00000408657.2:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431884
  ensembl transcript: ENST00000525042
  gene symbol: LGALS8
  hgvsc: ENST00000525042.1:c.256T>G
  hgvsp: ENSP00000431884.1:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000385999
  ensembl transcript: ENST00000406509
  gene symbol: LGALS8
  hgvsc: ENST00000406509.3:c.256T>G
  hgvsp: ENSP00000385999.3:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000342139
  ensembl transcript: ENST00000341872
  gene symbol: LGALS8
  hgvsc: ENST00000341872.6:c.256T>G
  hgvsp: ENSP00000342139.6:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000366583
  gene symbol: LGALS8
  hgvsc: ENST00000366583.2:n.432T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000435460
  ensembl transcript: ENST00000526589
  gene symbol: LGALS8
  hgvsc: ENST00000526589.1:c.256T>G
  hgvsp: ENSP00000435460.1:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000309576
  ensembl transcript: ENST00000352231
  gene symbol: LGALS8
  hgvsc: ENST00000352231.2:c.256T>G
  hgvsp: ENSP00000309576.2:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000405504
  ensembl transcript: ENST00000454943
  gene symbol: LGALS8
  hgvsc: ENST00000454943.2:c.256T>G
  hgvsp: ENSP00000405504.2:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000431398
  ensembl transcript: ENST00000527974
  gene symbol: LGALS8
  hgvsc: ENST00000527974.1:c.256T>G
  hgvsp: ENSP00000431398.1:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000355543
  ensembl transcript: ENST00000366584
  gene symbol: LGALS8
  hgvsc: ENST00000366584.4:c.256T>G
  hgvsp: ENSP00000355543.4:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000238181
  ensembl transcript: ENST00000238181
  gene symbol: LGALS8
  hgvsc: ENST00000238181.7:c.256T>G
  hgvsp: ENSP00000238181.7:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000398630
  ensembl transcript: ENST00000430527
  gene symbol: LGALS8
  hgvsc: ENST00000430527.2:c.256T>G
  hgvsp: ENSP00000398630.2:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000437040
  ensembl transcript: ENST00000526634
  gene symbol: LGALS8
  hgvsc: ENST00000526634.1:c.256T>G
  hgvsp: ENSP00000437040.1:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000116977
  ensembl transcript: ENST00000532826
  gene symbol: LGALS8
  hgvsc: ENST00000532826.1:n.436T>G
  variant of: http://identifiers.org/hgnc/6569
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116977
  ensembl protein: ENSP00000410843
  ensembl transcript: ENST00000416919
  gene symbol: LGALS8
  hgvsc: ENST00000416919.2:c.256T>G
  hgvsp: ENSP00000410843.2:p.Trp86Gly
  variant of: http://identifiers.org/hgnc/6569
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Trp86Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-236702306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 236702306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 236702306
allele count: 19
allele frequency: 1.564996787638173e-4
allele num: 121406
alternate allele: T
canonical: true
consequence: missense
filter: PASS
hgvs: p.Arg88Trp
num of homozygotes: 0
reference allele: C

Annotation
canonical: true
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000435460
ensembl transcript: ENST00000526589
gene symbol: LGALS8
hgvsc: ENST00000526589.1:c.73G>T
hgvsp: ENSP00000435460.1:p.Asp25Tyr
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000366583
gene symbol: LGALS8
hgvsc: ENST00000366583.2:n.249G>T
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 3834
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 974
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5411
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5089
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5107
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4551
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7885
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 414
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5043
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 998
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2055
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2531
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1266
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3090
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37326
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9198
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.10798924993892e-5
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.661007e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.254e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

VQSLOD
type: SiteQuality
SIO_000300: -9.327e-1

FS
type: SiteQuality
SIO_000300: 4.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.98e-1

Annotation
canonical: false
consequence: stop_gained
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000355543
ensembl transcript: ENST00000366584
gene symbol: LGALS8
hgvsc: ENST00000366584.4:c.76C>T
hgvsp: ENSP00000355543.4:p.Gln26Ter
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: stop_gained
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.76C>T
hgvsp: ENSP00000437040.1:p.Gln26Ter
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 5077
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7923
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 959
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2533
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5042
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5415
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 414
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4552
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5102
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3834
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3089
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1374
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37331
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.00294144130624e-5
allele num: 66634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 3.661081e6

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 1.824e1

FS
type: SiteQuality
SIO_000300: 2.627e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.414e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000532826
gene symbol: LGALS8
hgvsc: ENST00000532826.1:n.265C>G
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000407428
ensembl transcript: ENST00000434231
gene symbol: LGALS8
hgvsc: ENST00000434231.2:c.46-1343C>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7963
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2533
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5053
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5044
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5104
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3835
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3088
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4549
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2055
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5417
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 423
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9559
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37323
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.626e1

VQSLOD
type: SiteQuality
SIO_000300: -4.3e-3

FS
type: SiteQuality
SIO_000300: 6.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.661003e6

MQRankSum
type: SiteQuality
SIO_000300: -6.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000366583
gene symbol: LGALS8
hgvsc: ENST00000366583.2:n.264G>A
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000407428
ensembl transcript: ENST00000434231
gene symbol: LGALS8
hgvsc: ENST00000434231.2:c.46-1340G>A
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4547
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3086
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 423
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7935
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5047
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2054
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2535
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5101
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 962
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5422
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5045
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3837
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2552
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37323
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 352
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.660682e6

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.655e0

QD
type: SiteQuality
SIO_000300: 3.125e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.851e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.614e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.68e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431398
ensembl transcript: ENST00000527974
gene symbol: LGALS8
hgvsc: ENST00000527974.1:c.89G>T
hgvsp: ENSP00000431398.1:p.Gly30Val
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000532826
gene symbol: LGALS8
hgvsc: ENST00000532826.1:n.269G>T
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7927
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5101
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4544
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5049
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1599
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 425
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 967
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5427
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3836
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2054
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5042
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2534
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1268
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3088
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37321
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

DP
type: SiteQuality
SIO_000300: 3.660629e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.747e0

FS
type: SiteQuality
SIO_000300: 1.2294e1

VQSLOD
type: SiteQuality
SIO_000300: -1.695e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.135e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000532826
gene symbol: LGALS8
hgvsc: ENST00000532826.1:n.277_280delATTG
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000528782
gene symbol: LGALS8
hgvsc: ENST00000528782.1:n.277_280delATTG
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 5102
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4547
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2054
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5044
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 425
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7935
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 986
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5398
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2534
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5046
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3835
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3087
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37326
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.003121623244087e-5
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.118e0

MQ
type: SiteQuality
SIO_000300: 5.159e1

DP
type: SiteQuality
SIO_000300: 3.660371e6

QD
type: SiteQuality
SIO_000300: 1.11e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: -3.916e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431398
ensembl transcript: ENST00000527974
gene symbol: LGALS8
hgvsc: ENST00000527974.1:c.99T>C
hgvsp: ENST00000527974.1:c.99T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000408657
ensembl transcript: ENST00000450372
gene symbol: LGALS8
hgvsc: ENST00000450372.2:c.99T>C
hgvsp: ENST00000450372.2:c.99T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 8045
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3835
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5103
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 943
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 139
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5049
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 823
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4545
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5041
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2054
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5315
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3088
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9177
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2533
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37327
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

FS
type: SiteQuality
SIO_000300: 2.115e0

DP
type: SiteQuality
SIO_000300: 3.659876e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.053e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000385999
ensembl transcript: ENST00000406509
gene symbol: LGALS8
hgvsc: ENST00000406509.3:c.106C>T
hgvsp: ENSP00000385999.3:p.Arg36Cys
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000532826
gene symbol: LGALS8
hgvsc: ENST00000532826.1:n.286C>T
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7203
bin: 2.25e1
variant carriers: 1772

GenotypeDepth
all individuals: 2257
bin: 6.75e1
variant carriers: 2151

GenotypeDepth
all individuals: 4564
bin: 4.75e1
variant carriers: 4271

GenotypeDepth
all individuals: 271
bin: 1.25e1
variant carriers: 219

GenotypeDepth
all individuals: 1808
bin: 7.25e1
variant carriers: 1729

GenotypeDepth
all individuals: 4627
bin: 2.75e1
variant carriers: 2956

GenotypeDepth
all individuals: 125
bin: 7.5e0
variant carriers: 23

GenotypeDepth
all individuals: 10037
bin: 9.75e1
variant carriers: 9791

GenotypeDepth
all individuals: 2779
bin: 6.25e1
variant carriers: 2606

GenotypeDepth
all individuals: 1221
bin: 8.25e1
variant carriers: 1179

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 3

GenotypeDepth
all individuals: 899
bin: 1.75e1
variant carriers: 877

GenotypeDepth
all individuals: 982
bin: 8.75e1
variant carriers: 934

GenotypeDepth
all individuals: 4777
bin: 3.75e1
variant carriers: 4455

GenotypeDepth
all individuals: 4976
bin: 4.25e1
variant carriers: 4691

GenotypeDepth
all individuals: 4416
bin: 3.25e1
variant carriers: 3870

GenotypeDepth
all individuals: 3425
bin: 5.75e1
variant carriers: 3216

GenotypeDepth
all individuals: 798
bin: 9.25e1
variant carriers: 763

GenotypeDepth
all individuals: 4079
bin: 5.25e1
variant carriers: 3807

GenotypeDepth
all individuals: 1459
bin: 7.75e1
variant carriers: 1395

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 36

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 53

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 28

GenotypeQuality
all individuals: 47366
bin: 9.75e1
variant carriers: 45423

GenotypeQuality
all individuals: 539
bin: 8.75e1
variant carriers: 458

GenotypeQuality
all individuals: 174
bin: 2.25e1
variant carriers: 42

GenotypeQuality
all individuals: 354
bin: 5.25e1
variant carriers: 325

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 121

GenotypeQuality
all individuals: 882
bin: 8.25e1
variant carriers: 712

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 22

GenotypeQuality
all individuals: 920
bin: 9.25e1
variant carriers: 815

GenotypeQuality
all individuals: 931
bin: 7.75e1
variant carriers: 687

GenotypeQuality
all individuals: 252
bin: 4.75e1
variant carriers: 225

GenotypeQuality
all individuals: 1088
bin: 6.75e1
variant carriers: 525

GenotypeQuality
all individuals: 514
bin: 7.25e1
variant carriers: 336

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 21

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 228

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 82

GenotypeQuality
all individuals: 6777
bin: 6.25e1
variant carriers: 436

GenotypeQuality
all individuals: 170
bin: 3.75e1
variant carriers: 133

East Asian
type: Population
allele count: 4216
allele frequency: 4.884151992585727e-1
allele num: 8632
num of homozygotes: 1027

Latino
type: Population
allele count: 5951
allele frequency: 5.166695606876194e-1
allele num: 11518
num of homozygotes: 1552

European (Finnish)
type: Population
allele count: 4846
allele frequency: 7.351334951456311e-1
allele num: 6592
num of homozygotes: 1789

African
type: Population
allele count: 5056
allele frequency: 4.864344814315952e-1
allele num: 10394
num of homozygotes: 1251

Other
type: Population
allele count: 546
allele frequency: 6.066666666666667e-1
allele num: 900
num of homozygotes: 166

European (Non-Finnish)
type: Population
allele count: 45428
allele frequency: 6.834155734745456e-1
allele num: 66472
num of homozygotes: 15531

South Asian
type: Population
allele count: 7747
allele frequency: 4.734751252903068e-1
allele num: 16362
num of homozygotes: 1893

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.64e-2

QD
type: SiteQuality
SIO_000300: 2.034e1

DP
type: SiteQuality
SIO_000300: 3.981761e6

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.107G>A
hgvsp: ENSP00000437040.1:p.Arg36His
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.107G>A
hgvsp: ENSP00000431884.1:p.Arg36His
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1020
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14456
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 657
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 963
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23618
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 857
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8148
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2075
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 324
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4668
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2028
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1157
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6069
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10171
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527463799107961e-5
allele num: 65468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16044
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.257808e6

VQSLOD
type: SiteQuality
SIO_000300: -2.004e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.518e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.92e-1

QD
type: SiteQuality
SIO_000300: 2.104e1

MQ
type: SiteQuality
SIO_000300: 5.896e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.108T>C
hgvsp: ENST00000525042.1:c.108T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.108T>C
hgvsp: ENST00000526634.1:c.108T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 324
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14398
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2069
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 855
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1095
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1139
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8128
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 657
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 998
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 482
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4668
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 410
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23578
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2021
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10167
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.2375249500998e-5
allele num: 16032
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.167e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.06e-1

DP
type: SiteQuality
SIO_000300: 2.255732e6

MQ
type: SiteQuality
SIO_000300: 5.862e1

VQSLOD
type: SiteQuality
SIO_000300: -2.903e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.731e0

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.122G>C
hgvsp: ENSP00000431884.1:p.Ser41Thr
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431398
ensembl transcript: ENST00000527974
gene symbol: LGALS8
hgvsc: ENST00000527974.1:c.122G>C
hgvsp: ENSP00000431398.1:p.Ser41Thr
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1991
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 852
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13763
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2806
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1116
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2127
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4666
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7464
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21586
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 648
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 851
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 340
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 478
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32862
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3822
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10119
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.538935056940597e-4
allele num: 6498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15756
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.199592e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.024e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.574e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000434860
ensembl transcript: ENST00000323938
gene symbol: LGALS8
hgvsc: ENST00000323938.6:c.126C>T
hgvsp: ENST00000323938.6:c.126C>T(p.%3D)
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000309576
ensembl transcript: ENST00000352231
gene symbol: LGALS8
hgvsc: ENST00000352231.2:c.126C>T
hgvsp: ENST00000352231.2:c.126C>T(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 20809
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 320
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13850
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3417
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4667
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7180
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2425
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1950
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 847
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 647
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 477
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1112
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10112
bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 1
allele frequency: 8.857395925597875e-5
allele num: 11290
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.372673973999491e-5
allele num: 15692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.949e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

DP
type: SiteQuality
SIO_000300: 2.18081e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 1.126e1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000342139
ensembl transcript: ENST00000341872
gene symbol: LGALS8
hgvsc: ENST00000341872.6:c.127G>A
hgvsp: ENSP00000342139.6:p.Ala43Thr
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000407428
ensembl transcript: ENST00000434231
gene symbol: LGALS8
hgvsc: ENST00000434231.2:c.46-1301G>A
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1109
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 846
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1940
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 320
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7066
bin: 3.25e1
variant carriers: 7

GenotypeDepth
all individuals: 20681
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 979
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3541
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4667
bin: 9.75e1
variant carriers: 9

GenotypeDepth
all individuals: 2482
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 648
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 402
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 323
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13902
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 339
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4644
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10126
bin: 9.75e1
variant carriers: 39

GenotypeQuality
all individuals: 1750
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.865248226950355e-5
allele num: 11280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 2.487879561112529e-3
allele num: 15676
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

QD
type: SiteQuality
SIO_000300: 1.037e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 2.176475e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000528782
gene symbol: LGALS8
hgvsc: ENST00000528782.1:n.308C>G
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: true
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000435460
ensembl transcript: ENST00000526589
gene symbol: LGALS8
hgvsc: ENST00000526589.1:c.128C>G
hgvsp: ENSP00000435460.1:p.Ala43Gly
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 3661
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 843
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20522
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1907
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6964
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 991
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13994
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2567
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1103
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31511
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10095
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 324
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.869966294128082e-5
allele num: 11274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.23e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.17052e6

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.129A>G
hgvsp: ENST00000526634.1:c.129A>G(p.%3D)
variant of: http://identifiers.org/hgnc/6569

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431398
ensembl transcript: ENST00000527974
gene symbol: LGALS8
hgvsc: ENST00000527974.1:c.129A>G
hgvsp: ENST00000527974.1:c.129A>G(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1029
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2680
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20211
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14018
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 399
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1101
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6846
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 843
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3925
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5068
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30848
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5290
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10095
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591849729385546e-5
allele num: 62820
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.95e-1

DP
type: SiteQuality
SIO_000300: 2.163122e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.153e0

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

MQ
type: SiteQuality
SIO_000300: 5.75e1

QD
type: SiteQuality
SIO_000300: 6.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.085e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.130G>C
hgvsp: ENSP00000431884.1:p.Asp44His
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2688
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6799
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14097
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 337
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1015
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1100
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20181
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1890
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 399
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3934
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 844
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10094
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5081
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31204
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5264
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.915953506194916e-4
allele num: 15658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.562e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.216e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 2.162341e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000407428
ensembl transcript: ENST00000434231
gene symbol: LGALS8
hgvsc: ENST00000434231.2:c.46-1290A>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1843
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5464
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13518
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6433
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3321
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 842
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18887
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1135
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6586
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10085
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1606
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4947
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11108
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616658044490429e-5
allele num: 61856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

FS
type: SiteQuality
SIO_000300: 5.069e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

QD
type: SiteQuality
SIO_000300: 1.265e1

VQSLOD
type: SiteQuality
SIO_000300: -5.725e-1

DP
type: SiteQuality
SIO_000300: 2.12531e6

MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.82e-1

GenotypeDepth
all individuals: 1080
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1477
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7325
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1816
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12374
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17504
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3882
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6181
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 842
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8051
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10081
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1538
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.198753296571566e-4
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.085529e6

MQRankSum
type: SiteQuality
SIO_000300: -7.56e-1

QD
type: SiteQuality
SIO_000300: 1.076e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.244e0

VQSLOD
type: SiteQuality
SIO_000300: -1.361e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 12402
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 841
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3899
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17498
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1465
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1078
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6151
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1813
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8096
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10079
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.640312315464864e-5
allele num: 60964
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.797e0

DP
type: SiteQuality
SIO_000300: 2.084828e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

QD
type: SiteQuality
SIO_000300: 1.475e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 4699
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 312
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10698
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1754
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2441
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 14879
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 234
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 305
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1073
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4665
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 835
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10550
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10428
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10077
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1411
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23108
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6254
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.799029669714499e-4
allele num: 10718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.039e0

MQRankSum
type: SiteQuality
SIO_000300: -6.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.38e-1

DP
type: SiteQuality
SIO_000300: 2.010489e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e0

QD
type: SiteQuality
SIO_000300: 1.121e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.47e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 15464
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3941
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 336
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 312
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variant carriers: 0

GenotypeDepth
all individuals: 10211
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5512
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 305
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variant carriers: 0

GenotypeDepth
all individuals: 325
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
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variant carriers: 0

GenotypeDepth
all individuals: 1052
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 319
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1612
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 586
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variant carriers: 0

GenotypeDepth
all individuals: 832
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5833
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7547
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10068
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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ReadPosRankSum
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FS
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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Latino
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African
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East Asian
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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DP
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FS
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MQ
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InbreedingCoeff
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SIO_000300: -2.1e-3

BaseQRankSum
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MQRankSum
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SIO_000300: -6.66e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 747

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

Latino
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allele frequency: 2.374071015689513e-3
allele num: 9688
num of homozygotes: 0

African
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allele count: 786
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allele num: 9944
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East Asian
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.806425265450586e-5
allele num: 14692
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 3
allele frequency: 3.703703703703704e-3
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European (Non-Finnish)
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allele count: 9
allele frequency: 1.703771013175829e-4
allele num: 52824
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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FS
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InbreedingCoeff
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SIO_000300: 3.77e-2

MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Other
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African
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European (Finnish)
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South Asian
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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QD
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FS
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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East Asian
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South Asian
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 10318
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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Other
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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QD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele num: 11526
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66300
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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SIO_000300: 4.25e0

FS
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SIO_000300: 1.4285e1

DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 7243

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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ClippingRankSum
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FS
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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InbreedingCoeff
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30243
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6910
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.188516084399862e-4
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.59e-2

QD
type: SiteQuality
SIO_000300: 1.403e1

VQSLOD
type: SiteQuality
SIO_000300: -1.284e0

FS
type: SiteQuality
SIO_000300: 1.0216e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 5.841e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.252e0

DP
type: SiteQuality
SIO_000300: 2.419487e6

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2933
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4317
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 285
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8015
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 736
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10239
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6031
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4812
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8531
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9545
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7242
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4096
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30248
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.937e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.86e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 2.421593e6

VQSLOD
type: SiteQuality
SIO_000300: -1.697e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 7.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8551
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9541
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10250
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4908
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1181
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 626
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8016
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4318
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1878
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2933
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7370
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30259
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.997120921305183e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

VQSLOD
type: SiteQuality
SIO_000300: -1.139e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

DP
type: SiteQuality
SIO_000300: 2.422598e6

Annotation
canonical: false
consequence: splice_region_variant
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.135-8T>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2934
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4317
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10323
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8019
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5094
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8639
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6037
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1181
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9546
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4086
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2529
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30268
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3731
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2820
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7600
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.426074e6

QD
type: SiteQuality
SIO_000300: 7.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.434e0

FS
type: SiteQuality
SIO_000300: 2.838e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.282e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.88e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000434860
ensembl transcript: ENST00000323938
gene symbol: LGALS8
hgvsc: ENST00000323938.6:c.135-84T>C
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2934
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8685
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9550
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10371
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5159
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4316
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6038
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8019
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1181
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 97
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4104
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.657e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.235e0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

DP
type: SiteQuality
SIO_000300: 2.428039e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.411e1

GenotypeDepth
all individuals: 8696
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9550
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2934
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5167
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 433
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4316
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1181
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6038
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8020
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 184
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10374
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4105
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4167
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7830
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3735
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.523e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 2.428312e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.152A>G
hgvsp: ENSP00000431884.1:p.Gln51Arg
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 271
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10387
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 434
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9514
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6045
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1881
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1183
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5027
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 759
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4317
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8682
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 382
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2935
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8005
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4132
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4622
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30226
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.254e0

DP
type: SiteQuality
SIO_000300: 2.427431e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.26e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

VQSLOD
type: SiteQuality
SIO_000300: -1.066e0

MQRankSum
type: SiteQuality
SIO_000300: -1.022e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 9.350000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

Annotation
canonical: false
consequence: frameshift_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000385999
ensembl transcript: ENST00000406509
gene symbol: LGALS8
hgvsc: ENST00000406509.3:c.163_164delAG
hgvsp: ENSP00000385999.3:p.Ser55HisfsTer29
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 2918
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9386
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5189
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 758
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1181
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7867
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8907
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5978
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10366
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 207
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 435
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 381
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 4279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2522
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30235
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 6966
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4151
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4554
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239854633555421e-4
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

FS
type: SiteQuality
SIO_000300: 1.533e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.014e0

MQ
type: SiteQuality
SIO_000300: 5.648e1

DP
type: SiteQuality
SIO_000300: 2.420316e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 1.699e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.328e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000366583
gene symbol: LGALS8
hgvsc: ENST00000366583.2:n.341C>T
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 6347
bin: 3.75e1
variant carriers: 4616

GenotypeDepth
all individuals: 2600
bin: 6.75e1
variant carriers: 2453

GenotypeDepth
all individuals: 405
bin: 1.75e1
variant carriers: 351

GenotypeDepth
all individuals: 4983
bin: 2.75e1
variant carriers: 1909

GenotypeDepth
all individuals: 5700
bin: 5.25e1
variant carriers: 5138

GenotypeDepth
all individuals: 5973
bin: 3.25e1
variant carriers: 3164

GenotypeDepth
all individuals: 2676
bin: 2.25e1
variant carriers: 856

GenotypeDepth
all individuals: 625
bin: 9.25e1
variant carriers: 612

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2001
bin: 7.25e1
variant carriers: 1881

GenotypeDepth
all individuals: 145
bin: 1.25e1
variant carriers: 130

GenotypeDepth
all individuals: 6573
bin: 4.25e1
variant carriers: 5379

GenotypeDepth
all individuals: 6320
bin: 4.75e1
variant carriers: 5499

GenotypeDepth
all individuals: 4596
bin: 5.75e1
variant carriers: 4188

GenotypeDepth
all individuals: 25
bin: 7.5e0
variant carriers: 21

GenotypeDepth
all individuals: 767
bin: 8.75e1
variant carriers: 732

GenotypeDepth
all individuals: 4995
bin: 9.75e1
variant carriers: 4928

GenotypeDepth
all individuals: 3515
bin: 6.25e1
variant carriers: 3262

GenotypeDepth
all individuals: 1039
bin: 8.25e1
variant carriers: 1001

GenotypeDepth
all individuals: 1418
bin: 7.75e1
variant carriers: 1352

GenotypeQuality
all individuals: 809
bin: 8.75e1
variant carriers: 300

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 48

GenotypeQuality
all individuals: 1329
bin: 9.25e1
variant carriers: 617

GenotypeQuality
all individuals: 157
bin: 5.75e1
variant carriers: 126

GenotypeQuality
all individuals: 3420
bin: 6.25e1
variant carriers: 199

GenotypeQuality
all individuals: 151
bin: 3.75e1
variant carriers: 110

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 69

GenotypeQuality
all individuals: 1418
bin: 7.75e1
variant carriers: 361

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 91

GenotypeQuality
all individuals: 1025
bin: 7.25e1
variant carriers: 193

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 69

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 56

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 115

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 75

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 56

GenotypeQuality
all individuals: 47992
bin: 9.75e1
variant carriers: 43965

GenotypeQuality
all individuals: 1393
bin: 8.25e1
variant carriers: 459

GenotypeQuality
all individuals: 1939
bin: 6.75e1
variant carriers: 273

GenotypeQuality
all individuals: 168
bin: 4.75e1
variant carriers: 138

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 153

Other
type: Population
allele count: 497
allele frequency: 5.485651214128036e-1
allele num: 906
num of homozygotes: 136

Latino
type: Population
allele count: 5511
allele frequency: 4.797179665738162e-1
allele num: 11488
num of homozygotes: 1309

European (Finnish)
type: Population
allele count: 4285
allele frequency: 6.534004269594389e-1
allele num: 6558
num of homozygotes: 1404

European (Non-Finnish)
type: Population
allele count: 41147
allele frequency: 6.19683734939759e-1
allele num: 66400
num of homozygotes: 12764

African
type: Population
allele count: 2973
allele frequency: 2.862507221259388e-1
allele num: 10386
num of homozygotes: 439

East Asian
type: Population
allele count: 4143
allele frequency: 4.809612259113072e-1
allele num: 8614
num of homozygotes: 979

South Asian
type: Population
allele count: 7464
allele frequency: 4.526928675400291e-1
allele num: 16488
num of homozygotes: 1762

BaseQRankSum
type: SiteQuality
SIO_000300: -1.928e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

FS
type: SiteQuality
SIO_000300: 1.867e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.94e-2

DP
type: SiteQuality
SIO_000300: 3.252659e6

QD
type: SiteQuality
SIO_000300: 2.616e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

Annotation
canonical: false
consequence: protein_altering_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000437040
ensembl transcript: ENST00000526634
gene symbol: LGALS8
hgvsc: ENST00000526634.1:c.166_167insGTG
hgvsp: ENSP00000437040.1:p.Met56delinsSerVal
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 5706
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4095
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6297
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5866
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 6434
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2029
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3895
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 886
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2238
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5086
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6037
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 720
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2939
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1162
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1735
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 5017
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50323
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2714
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.242938538004607e-4
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 3.431524e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

QD
type: SiteQuality
SIO_000300: 2.84e1

FS
type: SiteQuality
SIO_000300: 2.615e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000434860
ensembl transcript: ENST00000323938
gene symbol: LGALS8
hgvsc: ENST00000323938.6:c.135-50A>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 2

GenotypeDepth
all individuals: 400
bin: 1.75e1
variant carriers: 389

GenotypeDepth
all individuals: 886
bin: 8.75e1
variant carriers: 876

GenotypeDepth
all individuals: 720
bin: 9.25e1
variant carriers: 717

GenotypeDepth
all individuals: 2939
bin: 6.75e1
variant carriers: 2911

GenotypeDepth
all individuals: 137
bin: 1.25e1
variant carriers: 130

GenotypeDepth
all individuals: 1735
bin: 7.75e1
variant carriers: 1720

GenotypeDepth
all individuals: 5086
bin: 3.25e1
variant carriers: 3384

GenotypeDepth
all individuals: 1162
bin: 8.25e1
variant carriers: 1154

GenotypeDepth
all individuals: 3895
bin: 6.25e1
variant carriers: 3839

GenotypeDepth
all individuals: 6037
bin: 5.25e1
variant carriers: 5921

GenotypeDepth
all individuals: 5706
bin: 3.75e1
variant carriers: 4924

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 21

GenotypeDepth
all individuals: 6297
bin: 4.25e1
variant carriers: 5905

GenotypeDepth
all individuals: 6434
bin: 4.75e1
variant carriers: 6204

GenotypeDepth
all individuals: 4095
bin: 2.75e1
variant carriers: 1988

GenotypeDepth
all individuals: 2238
bin: 7.25e1
variant carriers: 2215

GenotypeDepth
all individuals: 5017
bin: 5.75e1
variant carriers: 4924

GenotypeDepth
all individuals: 2029
bin: 2.25e1
variant carriers: 916

GenotypeDepth
all individuals: 5866
bin: 9.75e1
variant carriers: 5849

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 135

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 49

GenotypeQuality
all individuals: 1106
bin: 9.25e1
variant carriers: 822

GenotypeQuality
all individuals: 2714
bin: 6.25e1
variant carriers: 261

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 75

GenotypeQuality
all individuals: 1095
bin: 7.75e1
variant carriers: 491

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 58

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 61

GenotypeQuality
all individuals: 1088
bin: 8.25e1
variant carriers: 636

GenotypeQuality
all individuals: 792
bin: 7.25e1
variant carriers: 265

GenotypeQuality
all individuals: 133
bin: 3.75e1
variant carriers: 120

GenotypeQuality
all individuals: 1572
bin: 6.75e1
variant carriers: 361

GenotypeQuality
all individuals: 205
bin: 5.25e1
variant carriers: 193

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 74

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 75

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 105

GenotypeQuality
all individuals: 617
bin: 8.75e1
variant carriers: 419

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 172

GenotypeQuality
all individuals: 50323
bin: 9.75e1
variant carriers: 49447

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 170

European (Finnish)
type: Population
allele count: 4864
allele frequency: 7.423687423687424e-1
allele num: 6552
num of homozygotes: 1814

South Asian
type: Population
allele count: 8847
allele frequency: 5.362468177960965e-1
allele num: 16498
num of homozygotes: 2429

Latino
type: Population
allele count: 7240
allele frequency: 6.305521686117401e-1
allele num: 11482
num of homozygotes: 2273

African
type: Population
allele count: 7072
allele frequency: 6.806544754571704e-1
allele num: 10390
num of homozygotes: 2445

East Asian
type: Population
allele count: 5462
allele frequency: 6.336426914153133e-1
allele num: 8620
num of homozygotes: 1728

Other
type: Population
allele count: 601
allele frequency: 6.633554083885209e-1
allele num: 906
num of homozygotes: 198

European (Non-Finnish)
type: Population
allele count: 47526
allele frequency: 7.15860822413014e-1
allele num: 66390
num of homozygotes: 16996

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

QD
type: SiteQuality
SIO_000300: 2.84e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

DP
type: SiteQuality
SIO_000300: 3.431524e6

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 2.615e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000366583
gene symbol: LGALS8
hgvsc: ENST00000366583.2:n.343T>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2185
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2968
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2913
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4114
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1418
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6509
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 911
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7414
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7411
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7515
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5615
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5178
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2282
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1789
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5382
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3777
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32881
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3023
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555161581288296e-5
allele num: 64302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.202e0

QD
type: SiteQuality
SIO_000300: 1.553e1

MQRankSum
type: SiteQuality
SIO_000300: -1.125e0

DP
type: SiteQuality
SIO_000300: 2.986865e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.384e0

VQSLOD
type: SiteQuality
SIO_000300: -1.524e0

MQ
type: SiteQuality
SIO_000300: 5.876e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431884
ensembl transcript: ENST00000525042
gene symbol: LGALS8
hgvsc: ENST00000525042.1:c.171A>C
hgvsp: ENSP00000431884.1:p.Lys57Asn
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7588
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 4932
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6019
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2576
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 2249
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1408
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3947
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 174
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2877
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7149
bin: 4.25e1
variant carriers: 5

GenotypeDepth
all individuals: 906
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 559
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 772
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7546
bin: 3.75e1
variant carriers: 7

GenotypeDepth
all individuals: 2912
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1073
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6228
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1757
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 410
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 679
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 2818
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 607
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5741
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32538
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014954172696575e-5
allele num: 66336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.702194357366771e-4
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.933488012374323e-4
allele num: 10344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.273e0

FS
type: SiteQuality
SIO_000300: 2.0038e2

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: -1.827e2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 2.957181e6

QD
type: SiteQuality
SIO_000300: 4.0e-2

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000528782
gene symbol: LGALS8
hgvsc: ENST00000528782.1:n.355C>G
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2883
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1415
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 904
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2266
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2918
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 421
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1768
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1085
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5939
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6390
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7623
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 7567
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 7291
bin: 4.25e1
variant carriers: 3

GenotypeDepth
all individuals: 773
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2237
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5068
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3997
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1064
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 139
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 32933
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5654
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.608011796510199e-5
allele num: 65104
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.928514694201747e-5
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.685772083614295e-4
allele num: 5932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.974674e6

VQSLOD
type: SiteQuality
SIO_000300: -2.214e1

QD
type: SiteQuality
SIO_000300: 5.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

FS
type: SiteQuality
SIO_000300: 6.8044e1

MQ
type: SiteQuality
SIO_000300: 5.887e1

Annotation
canonical: false
consequence: stop_gained
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000408657
ensembl transcript: ENST00000450372
gene symbol: LGALS8
hgvsc: ENST00000450372.2:c.175C>T
hgvsp: ENSP00000408657.2:p.Arg59Ter
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 140
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6390
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1768
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7623
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 421
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2237
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7291
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2266
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 904
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 773
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5068
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1085
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2918
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5939
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1415
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3997
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7567
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32933
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 2844
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 6
allele frequency: 5.957108816521049e-4
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.743375174337517e-4
allele num: 11472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.163e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

VQSLOD
type: SiteQuality
SIO_000300: -2.214e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

FS
type: SiteQuality
SIO_000300: 6.8044e1

DP
type: SiteQuality
SIO_000300: 2.974674e6

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

QD
type: SiteQuality
SIO_000300: 5.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000431398
ensembl transcript: ENST00000527974
gene symbol: LGALS8
hgvsc: ENST00000527974.1:c.176G>C
hgvsp: ENSP00000431398.1:p.Arg59Pro
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2975
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7483
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1511
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 963
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5230
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1871
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5725
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7532
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2407
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3063
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7295
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1873
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6479
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2842
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35255
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4191
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3019
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-2

QD
type: SiteQuality
SIO_000300: 1.306e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 3.026126e6

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

MQ
type: SiteQuality
SIO_000300: 5.862e1

FS
type: SiteQuality
SIO_000300: 1.318e0

VQSLOD
type: SiteQuality
SIO_000300: -7.576000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000116977
ensembl transcript: ENST00000528782
gene symbol: LGALS8
hgvsc: ENST00000528782.1:n.360C>T
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5719
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4153
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2411
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5235
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3069
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7293
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6489
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7523
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2973
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7541
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1512
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35332
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2849
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5946
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

FS
type: SiteQuality
SIO_000300: 8.884e0

QD
type: SiteQuality
SIO_000300: 1.916e1

VQSLOD
type: SiteQuality
SIO_000300: -1.313e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.187e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.027936e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000342139
ensembl transcript: ENST00000341872
gene symbol: LGALS8
hgvsc: ENST00000341872.6:c.181G>A
hgvsp: ENSP00000342139.6:p.Asp61Asn
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1890
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7296
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1512
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2973
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1159
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3069
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7545
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5716
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7521
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1875
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2410
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3347
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3031
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35334
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.934e0

FS
type: SiteQuality
SIO_000300: 5.356e0

DP
type: SiteQuality
SIO_000300: 3.028174e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

MQ
type: SiteQuality
SIO_000300: 5.878e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.397e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000408657
ensembl transcript: ENST00000450372
gene symbol: LGALS8
hgvsc: ENST00000450372.2:c.183T>C
hgvsp: ENST00000450372.2:c.183T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7291
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3069
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5724
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7543
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2973
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1898
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2410
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7524
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1875
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2390
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35337
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3031
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.342e0

QD
type: SiteQuality
SIO_000300: 1.626e1

FS
type: SiteQuality
SIO_000300: 6.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.77e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.02817e6

Annotation
canonical: true
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000435460
ensembl transcript: ENST00000526589
gene symbol: LGALS8
hgvsc: ENST00000526589.1:c.202C>T
hgvsp: ENSP00000435460.1:p.Pro68Ser
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 5698
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4158
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7560
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3069
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1900
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2973
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7539
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2411
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7301
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6486
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5934
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35342
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3446
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.588e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

QD
type: SiteQuality
SIO_000300: 1.185e1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

DP
type: SiteQuality
SIO_000300: 3.029072e6

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000355543
ensembl transcript: ENST00000366584
gene symbol: LGALS8
hgvsc: ENST00000366584.4:c.205C>T
hgvsp: ENSP00000355543.4:p.Arg69Cys
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5689
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7542
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1896
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7301
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4161
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7562
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6489
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5925
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35351
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3373
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.029597e6

FS
type: SiteQuality
SIO_000300: 5.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.105e0

QD
type: SiteQuality
SIO_000300: 1.054e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000398630
ensembl transcript: ENST00000430527
gene symbol: LGALS8
hgvsc: ENST00000430527.2:c.206G>A
hgvsp: ENSP00000398630.2:p.Arg69His
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7303
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7562
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4160
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7551
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1890
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2973
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6489
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5688
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2414
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35345
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3443
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2861
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.05e-1

DP
type: SiteQuality
SIO_000300: 3.029512e6

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000408657
ensembl transcript: ENST00000450372
gene symbol: LGALS8
hgvsc: ENST00000450372.2:c.218C>T
hgvsp: ENSP00000408657.2:p.Ala73Val
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7569
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7565
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1885
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3073
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5681
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4161
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35362
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4182
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3458
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.078e1

DP
type: SiteQuality
SIO_000300: 3.030354e6

VQSLOD
type: SiteQuality
SIO_000300: 8.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

FS
type: SiteQuality
SIO_000300: 3.347e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.249e0

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.989e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000355543
ensembl transcript: ENST00000366584
gene symbol: LGALS8
hgvsc: ENST00000366584.4:c.219C>T
hgvsp: ENST00000366584.4:c.219C>T(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 5682
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1876
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1157
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7566
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7573
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3073
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7310
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2414
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6491
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35365
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2405
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.571e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 1.324e1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 1.748e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.26e-1

DP
type: SiteQuality
SIO_000300: 3.030363e6

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000410843
ensembl transcript: ENST00000416919
gene symbol: LGALS8
hgvsc: ENST00000416919.2:c.220G>A
hgvsp: ENSP00000410843.2:p.Gly74Ser
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5678
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7576
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6493
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7310
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1157
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7569
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 805
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3453
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35365
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2407
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3035
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5946
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.828e1

QD
type: SiteQuality
SIO_000300: 1.528e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: -1.665e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 1.0277e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
type: SiteQuality
SIO_000300: 3.030498e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000398630
ensembl transcript: ENST00000430527
gene symbol: LGALS8
hgvsc: ENST00000430527.2:c.226A>G
hgvsp: ENSP00000398630.2:p.Ile76Val
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7312
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5681
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7581
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7571
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5236
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5951
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2860
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35368
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 3.030616e6

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 1.198e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.199e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000385999
ensembl transcript: ENST00000406509
gene symbol: LGALS8
hgvsc: ENST00000406509.3:c.231T>C
hgvsp: ENST00000406509.3:c.231T>C(p.%3D)
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2974
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7582
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7571
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1880
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5680
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2414
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5235
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7312
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4186
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35368
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2863
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3392
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3463
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e0

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

DP
type: SiteQuality
SIO_000300: 3.030659e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.65e-1

FS
type: SiteQuality
SIO_000300: 3.726e0

QD
type: SiteQuality
SIO_000300: 1.532e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000410843
ensembl transcript: ENST00000416919
gene symbol: LGALS8
hgvsc: ENST00000416919.2:c.233G>A
hgvsp: ENSP00000410843.2:p.Cys78Tyr
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7584
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7313
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7572
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1882
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2975
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5678
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5235
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1158
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3464
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5957
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3391
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35368
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.854e1

VQSLOD
type: SiteQuality
SIO_000300: -1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.251e0

FS
type: SiteQuality
SIO_000300: 1.5108e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.683e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

DP
type: SiteQuality
SIO_000300: 3.030783e6

QD
type: SiteQuality
SIO_000300: 1.455e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000408657
ensembl transcript: ENST00000450372
gene symbol: LGALS8
hgvsc: ENST00000450372.2:c.236A>G
hgvsp: ENSP00000408657.2:p.Asn79Ser
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 1513
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1881
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5680
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3072
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 964
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5234
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7579
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4159
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7577
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1159
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2975
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7312
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35370
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3393
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3039
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 3.030838e6

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 1.426e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000116977
ensembl protein: ENSP00000434860
ensembl transcript: ENST00000323938
gene symbol: LGALS8
hgvsc: ENST00000323938.6:c.175T>G
hgvsp: ENSP00000434860.1:p.Trp59Gly
variant of: http://identifiers.org/hgnc/6569

GenotypeDepth
all individuals: 7582
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3073
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5674
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1887
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 963
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1878
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4161
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7312
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2975
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2416
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1514
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7575
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1159
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6491
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 805
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5232
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35354
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 1.10978e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -5.967e1

MQ
type: SiteQuality
SIO_000300: 5.373e1

DP
type: SiteQuality
SIO_000300: 3.031136e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.461e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.123e0