-9218564665638412242tt295
type: ExactPosition
position: 295
reference: A0A547EJN8-1
type: Position

A0A547EJN8
annotation: SIPFEB5E2F18D4B27E8
reviewed: false
annotation: SIP4EB29437D35B81DC
annotation: SIP077E8B35913AE5C7
annotation: SIP95F8C41B8ECBA645
annotation: SIPF6597629F11FB6E6
component: SIP71E129C6CE449776
citation: http://purl.uniprot.org/citations/31282368
annotation: SIP2D6CCD56700EF884
modified: 2022-08-03
annotation: PRO_5034682520
existence: Inferred from Homology Existence
proteome: Unassembled WGS sequence
annotation: PRO_5034682519
annotation: SIPD4CAE824BA1C71C2
sequence: A0A547EJN8-1
classified with: http://purl.uniprot.org/keywords/865
classified with: http://purl.uniprot.org/keywords/1003
annotation: SIP4BC760AE9E582966
type: Protein
organism: http://purl.uniprot.org/taxonomy/75985
annotation: SIP5A2896B6965A6902
component: SIP7013454D96C65560
created: 2019-11-13
recommended name: SIPDA11EE82BC841626
classified with: GO_0005886
citation: SIP7776429440902C1B
classified with: http://purl.uniprot.org/keywords/594
version: 10
annotation: SIPE46F52DED65EC24C
annotation: SIPAC7D35A484139AC3
classified with: http://purl.uniprot.org/keywords/670
annotation: SIP9756A2E61E28FC7A
annotation: SIPA57EFE82A07A2C1D
mnemonic: A0A547EJN8_MANHA
proteome: Chromosome
annotation: SIP281511191F14C9F7
enzyme: http://purl.uniprot.org/enzyme/4.1.1.65
annotation: SIP1DC20AFC9BE5E74F
classified with: GO_0004609
classified with: http://purl.uniprot.org/keywords/210
classified with: GO_0006646

-9218564665638412242tt158
reference: A0A547EJN8-1
type: ExactPosition
position: 158
type: Position

PF02666
type: Resource
signature sequence match: Pfam PF02666 match 1
comment: PS_Dcarbxylase
database: Pfam

SIPA5E4728608C417E9
full name: Phosphatidylserine decarboxylase alpha chain
type: Structured Name

SIPAC7D35A484139AC3
type: Modified Residue Annotation
comment: Pyruvic acid (Ser); by autocatalysis
range: -9218564665638412242tt262tt262

SIPDA11EE82BC841626
ec name: 4.1.1.65
type: Structured Name
full name: Phosphatidylserine decarboxylase proenzyme

-9218564665638412242tt101
type: Position
type: ExactPosition
position: 101
reference: A0A547EJN8-1

SIP7776429440902C1B
title: Closed Genomes of Seven Mannheimia haemolytica isolates.
author: McVey D.S.
submitted to: EMBL/GenBank/DDBJ
date: 2017-08
author: Harhay G.P.
author: Harhay D.M.
author: Smith T.P.L.
type: Submission Citation

IPR033178
comment: PSD_type1_pro
type: Resource
database: InterPro

PTHR10067
type: Resource
database: PANTHER
comment: PTHR10067
signature sequence match: PANTHER PTHR10067 match 1

PRO_5034682519
range: -9218564665638412242tt262tt295
type: Chain Annotation
comment: Phosphatidylserine decarboxylase alpha chain
mass: 3860

SIPE46F52DED65EC24C
comment: Binds 1 pyruvoyl group covalently per subunit.
type: Cofactor Annotation
cofactor: CHEBI_15361

SIP95F8C41B8ECBA645
comment: Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily.
type: Similarity Annotation

SIP281511191F14C9F7
range: -9218564665638412242tt262tt262
type: Active Site Annotation
comment: Charge relay system; for autoendoproteolytic cleavage activity

SIP1DC20AFC9BE5E74F
range: -9218564665638412242tt261tt262
comment: Cleavage (non-hydrolytic); by autocatalysis
type: Site Annotation

PRO_5034682520
comment: Phosphatidylserine decarboxylase beta chain
type: Chain Annotation
mass: 29563
range: -9218564665638412242tt1tt261

-9218564665638412242tt261
position: 261
reference: A0A547EJN8-1
type: ExactPosition
type: Position

psd
orf name: FEA53_12340
orf name: CKG23_09450
type: Gene

-9218564665638412242tt262
reference: A0A547EJN8-1
position: 262
type: ExactPosition
type: Position

TIGR00163
signature sequence match: TIGRFAMs TIGR00163 match 1
type: Resource
comment: PS_decarb
database: TIGRFAMs

MF_00662
signature sequence match: HAMAP MF 00662 match 1
database: HAMAP
comment: PS_decarb_PSD_B_type1
type: Resource

SIPF6597629F11FB6E6
comment: Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
type: Function Annotation

SIP2D6CCD56700EF884
comment: Heterodimer of a large membrane-associated beta subunit and a small pyruvoyl-containing alpha subunit.
type: Subunit Annotation

-9218564665638412242tt1
type: Position
reference: A0A547EJN8-1
type: ExactPosition
position: 1

A0A547EJN8-citation-31282368
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

A0A547EJN8-1
mass: 33406
type: Simple Sequence
modified: 2019-11-13
value: MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAVTHFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADGRISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMPCDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITASMSTVWAGVINPPRPEKITTWAYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLASHLQVDSPVRMGEILAHQK
version: 1

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIPDFD0A92987295FDD
full name: Phosphatidylserine decarboxylase beta chain
type: Structured Name

SIP4BC760AE9E582966
type: PTM Annotation
comment: Is synthesized initially as an inactive proenzyme. Formation of the active enzyme involves a self-maturation process in which the active site pyruvoyl group is generated from an internal serine residue via an autocatalytic post-translational modification. Two non-identical subunits are generated from the proenzyme in this reaction, and the pyruvate is formed at the N-terminus of the alpha chain, which is derived from the carboxyl end of the proenzyme. The autoendoproteolytic cleavage occurs by a canonical serine protease mechanism, in which the side chain hydroxyl group of the serine supplies its oxygen atom to form the C-terminus of the beta chain, while the remainder of the serine residue undergoes an oxidative deamination to produce ammonia and the pyruvoyl prosthetic group on the alpha chain. During this reaction, the Ser that is part of the protease active site of the proenzyme becomes the pyruvoyl prosthetic group, which constitutes an essential element of the active site of the mature decarboxylase.

IPR003817
comment: PS_Dcarbxylase
database: InterPro
type: Resource

UGA-R5-128-1
type: Strain

IPR033177
type: Resource
comment: PSD
database: InterPro

SIPA57EFE82A07A2C1D
comment: Charge relay system; for autoendoproteolytic cleavage activity
range: -9218564665638412242tt101tt101
type: Active Site Annotation

SIP5A2896B6965A6902
comment: Charge relay system; for autoendoproteolytic cleavage activity
range: -9218564665638412242tt158tt158
type: Active Site Annotation

SIP077E8B35913AE5C7
type: Active Site Annotation
range: -9218564665638412242tt262tt262
comment: Schiff-base intermediate with substrate; via pyruvic acid; for decarboxylase activity

193
type: Strain

-9218550323744337874tt296
type: Position
position: 296
reference: A0A8E2TBP4-1
type: ExactPosition

-9218550323744337874tt172
type: Position
reference: A0A8E2TBP4-1
type: ExactPosition
position: 172

A0A8E2TBP4
organism: http://purl.uniprot.org/taxonomy/621
sequence: A0A8E2TBP4-1
version: 3
proteome: Unassembled WGS sequence
annotation: SIP93153C29536885F7
annotation: SIP986393B030484E00
annotation: SIPD86839998D8601F7
annotation: SIPA3FAFA9113153473
annotation: SIPF90279CFF0B05157
annotation: SIP22B2D9BF55F65AC1
citation: SIP238EEE755187E98D
existence: Predicted Existence
classified with: GO_0016021
created: 2022-01-19
annotation: SIP699A2781D1422DB4
mnemonic: A0A8E2TBP4_SHIBO
type: Protein
annotation: SIP02B1FBF08012293E
submitted name: SIPDF7B5D3295DC269A
classified with: http://purl.uniprot.org/keywords/1133
annotation: SIP0C26CAF545C068EE
modified: 2022-08-03
reviewed: false
annotation: SIP0CA3E085BD4101D2
citation: SIP5DED6864F83FB978
annotation: SIP0B9E2F47B0F13E80
annotation: SIP4CDEA2E0E8D344F8
citation: SIP49BBFC411619AF19

SIP0CA3E085BD4101D2
comment: Helical
range: -9218550323744337874tt328tt347
type: Transmembrane Annotation

SIP238EEE755187E98D
author: Nguyen K.
author: Thamlikitkul V.
type: Submission Citation
author: Sutton G.
submitted to: EMBL/GenBank/DDBJ
date: 2017-06
author: Fouts D.

IPR024013
comment: Colanic_acid_synth_WcaD
database: InterPro
type: Resource

SIP5DED6864F83FB978
author: Sutton G.
submitted to: EMBL/GenBank/DDBJ
title: WGS of SAMN07203007.
type: Submission Citation
date: 2017-06
author: Nguyen K.
author: Fouts D.
author: Thamlikitkul V.

-9218550323744337874tt203
type: ExactPosition
position: 203
type: Position
reference: A0A8E2TBP4-1

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

-9218550323744337874tt328
type: ExactPosition
type: Position
position: 328
reference: A0A8E2TBP4-1

SIP0B9E2F47B0F13E80
type: Transmembrane Annotation
comment: Helical
range: -9218550323744337874tt31tt48

SIP699A2781D1422DB4
type: Caution Annotation
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

SIPD86839998D8601F7
comment: Helical
type: Transmembrane Annotation
range: -9218550323744337874tt203tt226

wcaD
orf name: CEG99_19725
orf name: DLV22_08935
type: Gene

-9218550323744337874tt55
reference: A0A8E2TBP4-1
type: ExactPosition
position: 55
type: Position

SIPF90279CFF0B05157
comment: Helical
type: Transmembrane Annotation
range: -9218550323744337874tt246tt266

-9218550323744337874tt31
position: 31
type: Position
reference: A0A8E2TBP4-1
type: ExactPosition

A0A8E2TBP4-1
type: Simple Sequence
mass: 45409
modified: 2022-01-19
value: MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLLLFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIRFKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVLNFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGVMTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGSSSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIYFSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIVCPFILRKALNITR
version: 1

SIP93153C29536885F7
type: Transmembrane Annotation
range: -9218550323744337874tt368tt397
comment: Helical

-9218550323744337874tt48
position: 48
reference: A0A8E2TBP4-1
type: ExactPosition
type: Position

TIGR04010
database: TIGRFAMs
comment: WcaD
signature sequence match: TIGRFAMs TIGR04010 match 1
type: Resource

-9218550323744337874tt191
type: Position
position: 191
reference: A0A8E2TBP4-1
type: ExactPosition

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

-9218550323744337874tt368
position: 368
type: Position
reference: A0A8E2TBP4-1
type: ExactPosition

SIPA3FAFA9113153473
range: -9218550323744337874tt172tt191
type: Transmembrane Annotation
comment: Helical

SIP22B2D9BF55F65AC1
type: Transmembrane Annotation
comment: Helical
range: -9218550323744337874tt85tt105

SIP49BBFC411619AF19
author: Peters T.
type: Submission Citation
author: Grant K.
author: Nair S.
author: De Pinna E.
date: 2018-05
author: Ashton P.M.
submitted to: EMBL/GenBank/DDBJ
author: Dallman T.

-9218550323744337874tt73
position: 73
type: ExactPosition
type: Position
reference: A0A8E2TBP4-1

-9218550323744337874tt246
position: 246
type: Position
reference: A0A8E2TBP4-1
type: ExactPosition

-9218550323744337874tt105
type: ExactPosition
position: 105
type: Position
reference: A0A8E2TBP4-1

-9218550323744337874tt226
type: ExactPosition
position: 226
type: Position
reference: A0A8E2TBP4-1

-9218550323744337874tt347
type: ExactPosition
position: 347
type: Position
reference: A0A8E2TBP4-1

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

-9218550323744337874tt25
type: Position
reference: A0A8E2TBP4-1
type: ExactPosition
position: 25

-9218550323744337874tt7
type: ExactPosition
reference: A0A8E2TBP4-1
type: Position
position: 7

SIP02B1FBF08012293E
type: Transmembrane Annotation
range: -9218550323744337874tt278tt296
comment: Helical

-9218550323744337874tt85
type: ExactPosition
type: Position
position: 85
reference: A0A8E2TBP4-1

ESBL-A07-8-2
type: Strain

SIPDF7B5D3295DC269A
full name: Putative colanic acid polymerase WcaD
type: Structured Name

SIP986393B030484E00
range: -9218550323744337874tt55tt73
type: Transmembrane Annotation
comment: Helical

287711
type: Strain

-9218550323744337874tt138
type: Position
position: 138
reference: A0A8E2TBP4-1
type: ExactPosition

SIP4CDEA2E0E8D344F8
comment: Helical
range: -9218550323744337874tt117tt138
type: Transmembrane Annotation

-9218550323744337874tt278
position: 278
type: Position
type: ExactPosition
reference: A0A8E2TBP4-1

-9218550323744337874tt266
type: Position
reference: A0A8E2TBP4-1
position: 266
type: ExactPosition

-9218550323744337874tt397
type: Position
reference: A0A8E2TBP4-1
position: 397
type: ExactPosition

SIP0C26CAF545C068EE
range: -9218550323744337874tt7tt25
type: Transmembrane Annotation
comment: Helical

-9218550323744337874tt117
reference: A0A8E2TBP4-1
type: Position
type: ExactPosition
position: 117

SIP9C0537973B8CA816
date: 2018-08
type: Submission Citation
author: Guttman D.S.
title: Recombination of ecologically and evolutionarily significant loci maintains genetic cohesion in the Pseudomonas syringae species complex.
submitted to: EMBL/GenBank/DDBJ
author: Thakur S.
author: Weir B.S.
author: Dillon M.
author: Almeida R.N.D.

A0A0P9TRB6
classified with: http://purl.uniprot.org/keywords/997
annotation: SIPF4E08C20C3787F76
mnemonic: A0A0P9TRB6_9PSED
type: Protein
proteome: Unassembled WGS sequence
version: 25
annotation: SIP2E8568277A7B979D
classified with: GO_0005887
classified with: GO_1903425
modified: 2022-08-03
classified with: http://purl.uniprot.org/keywords/813
organism: http://purl.uniprot.org/taxonomy/251654
classified with: http://purl.uniprot.org/keywords/1133
sequence: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
annotation: SIP8EDFE26C79F0590C
recommended name: SIP0E954245F7FA06E4
annotation: SIPD3082ED2D2E1C121
annotation: SIPE6FB3612E77DC7E6
annotation: SIP195E7D9423ED0726
existence: Inferred from Homology Existence
created: 2016-01-20
annotation: SIPA58209C094D76F82
reviewed: false
citation: SIPBC1588399A165E50
citation: SIP9C0537973B8CA816

SIP8EDFE26C79F0590C
comment: Helical
range: -9218584722120861650tt98tt119
type: Transmembrane Annotation

MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
modified: 2016-01-20
type: Simple Sequence
version: 1
mass: 13049

SIP195E7D9423ED0726
comment: Helical
range: -9218584722120861650tt33tt56
type: Transmembrane Annotation

ICMP 3263
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPBC1588399A165E50
author: Gong Y.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Wang P.W.
author: Guttman D.S.
author: Thakur S.
author: Weir B.S.
date: 2015-09
title: Genome announcement of multiple Pseudomonas syringae strains.

IPR003691
type: Resource
database: InterPro
comment: CrcB

-9218584722120861650tt56
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: ExactPosition
position: 56
type: Position

-9218584722120861650tt33
type: ExactPosition
position: 33
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: Position

-9218584722120861650tt86
position: 86
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: ExactPosition
type: Position

PTHR28259
database: PANTHER
comment: PTHR28259
signature sequence match: PANTHER PTHR28259 match 1
type: Resource

ICMP 3549
type: Strain

SIPA58209C094D76F82
type: Function Annotation
comment: Important for reducing fluoride concentration in the cell, thus reducing its toxicity.

SIP0E954245F7FA06E4
full name: Putative fluoride ion transporter CrcB
type: Structured Name

MF_00454
comment: CrcB
signature sequence match: HAMAP MF 00454 match 1
database: HAMAP
type: Resource

crcB
orf name: ALP10_02756
orf name: ALP93_00496
type: Gene
orf name: ALO68_04496

-9218584722120861650tt68
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: ExactPosition
position: 68
type: Position

PF02537
type: Resource
comment: CRCB
signature sequence match: Pfam PF02537 match 1
database: Pfam

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

-9218584722120861650tt119
type: Position
position: 119
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: ExactPosition

SIPD3082ED2D2E1C121
comment: Belongs to the CrcB (TC 9.B.71) family.
type: Similarity Annotation

SIPE6FB3612E77DC7E6
type: Caution Annotation
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

-9218584722120861650tt98
type: ExactPosition
reference: MIQTILAVSIAGIAGTLLRFAAGTWVSANWPRHFYAATLAVNIVGCLIIGVLYGLFLLRPEVPIEIRAGLIVGFVGGLTTFSSFSLDTLRLLESGQVPLALGYAGISVFGGLLATWVGLSLTRL
type: Position
position: 98

SIP2E8568277A7B979D
type: Transmembrane Annotation
comment: Helical
range: -9218584722120861650tt68tt86

ICMP4531
type: Strain

A0A3G3E4L7
proteome: Unassembled WGS sequence
classified with: http://purl.uniprot.org/keywords/139
mnemonic: A0A3G3E4L7_SALET
citation: SIP9AD53E7D6A471F38
annotation: SIPD74BF5594DC0BCFA
citation: http://purl.uniprot.org/citations/30902850
version: 21
citation: http://purl.uniprot.org/citations/30286803
annotation: SIP69FC85EA7D4433C7
sequence: MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
annotation: SIPB5A65F093B5DFF4E
classified with: GO_0005524
alternative name: SIPA309F3952E20E34C
recommended name: SIP45B225C96B5B8720
citation: SIPE61F435060496D9F
annotation: SIPA3514C7D5D894379
modified: 2022-08-03
reviewed: false
classified with: GO_0045261
annotation: SIP06A0C558AD16A13D
classified with: http://purl.uniprot.org/keywords/1003
organism: http://purl.uniprot.org/taxonomy/143221
existence: Inferred from Homology Existence
citation: SIPA5FB095315502327
citation: SIPECD4C3A8F3797B60
alternative name: SIP1A3B8E10330D1A15
classified with: http://purl.uniprot.org/keywords/375
classified with: GO_0046933
citation: SIP570B54365FC8941A
annotation: SIPD9F431E86AD9311F
created: 2019-02-13
type: Protein
classified with: GO_0005886

SIP9AD53E7D6A471F38
date: 2021-05
author: Hoffmann M.
author: Luo Y.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
title: Whole genome PacBio Sequel sequence of Salmonella enterica subsp. enterica.
author: Balkey M.

SIP45B225C96B5B8720
full name: ATP synthase epsilon chain
type: Structured Name

-9218572173264348114tt133
position: 133
type: ExactPosition
reference: MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
type: Position

atpC
orf name: AT812_23245
orf name: B1277_12080
orf name: E0563_17970
orf name: AHW86_21315
type: Gene
orf name: FG623_022610
orf name: DKV27_19775
orf name: GB216_22120
orf name: CC786_18960

A0A3G3E4L7-citation-30902850
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

TIGR01216
type: Resource
comment: ATP_synt_epsi
signature sequence match: TIGRFAMs TIGR01216 match 1
database: TIGRFAMs

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

A0A3G3E4L7-citation-30286803
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

-9218572173264348114tt84
position: 84
type: Position
reference: MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
type: ExactPosition

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIPECD4C3A8F3797B60
date: 2019-10
group: NCBI Pathogen Detection Project
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

SIPE61F435060496D9F
author: Trees E.
author: Carleton-Romer H.A.
author: Kucerova Z.
group: PulseNet: The National Subtyping Network for Foodborne Disease Surveillance
author: Gerner-Smidt P.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Tarr C.L.
date: 2018-07
author: Katz L.S.
author: Roache K.F.
author: Sabol A.L.
author: Besser J.
author: Stroika S.

SIP570B54365FC8941A
date: 2018-07
author: Nair S.
author: De Pinna E.
author: Dallman T.
author: Peters T.
submitted to: EMBL/GenBank/DDBJ
author: Ashton P.M.
author: Grant K.
type: Submission Citation

SSF51344
type: Resource
database: SUPFAM
comment: SSF51344
signature sequence match: SUPFAM SSF51344 match 1

SSF46604
comment: SSF46604
type: Resource
database: SUPFAM
signature sequence match: SUPFAM SSF46604 match 1

cd12152
type: Resource
comment: F1-ATPase_delta
database: CDD
signature sequence match: CDD cd12152 match 1

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

PTHR13822
signature sequence match: PANTHER PTHR13822 match 1
comment: PTHR13822
database: PANTHER
type: Resource

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIPA309F3952E20E34C
full name: F-ATPase epsilon subunit
type: Structured Name

MF_00530
signature sequence match: HAMAP MF 00530 match 1
database: HAMAP
type: Resource
comment: ATP_synth_epsil_bac

IPR020547
type: Resource
database: InterPro
comment: ATP_synth_F1_dsu/esu_C

IPR020546
type: Resource
database: InterPro
comment: ATP_synth_F1_dsu/esu_N

SIPA5FB095315502327
group: GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback
date: 2018-07
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

PNUSAS008386
type: Strain

CFSAN024441
type: Strain

PF00401
type: Resource
signature sequence match: Pfam PF00401 match 1
database: Pfam
comment: ATP-synt_DE

MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
mass: 15064
type: Simple Sequence
version: 1
modified: 2019-02-13

PF02823
type: Resource
signature sequence match: Pfam PF02823 match 1
database: Pfam
comment: ATP-synt_DE_N

FDA00001071
type: Strain

SIPB5A65F093B5DFF4E
range: -9218572173264348114tt89tt133
comment: ATP-synt_DE
type: Domain Extent Annotation

SIPD74BF5594DC0BCFA
type: Domain Extent Annotation
comment: ATP-synt_DE_N
range: -9218572173264348114tt6tt84

-9218572173264348114tt89
type: Position
reference: MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
position: 89
type: ExactPosition

IPR001469
comment: ATP_synth_F1_dsu/esu
type: Resource
database: InterPro

Salmonella enterica
type: Strain

SIPD9F431E86AD9311F
type: Subunit Annotation
comment: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.

285585
type: Strain

365393
type: Strain

SIP69FC85EA7D4433C7
type: Similarity Annotation
comment: Belongs to the ATPase epsilon chain family.

HIY0083
type: Strain

176244
type: Strain

SIP1A3B8E10330D1A15
type: Structured Name
full name: ATP synthase F1 sector epsilon subunit

SIPA3514C7D5D894379
type: Function Annotation
comment: Produces ATP from ADP in the presence of a proton gradient across the membrane.

IPR036794
comment: ATP_F1_dsu/esu_C_sf
type: Resource
database: InterPro

-9218572173264348114tt6
position: 6
type: ExactPosition
reference: MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGSVTVLADTAIRGQDLDEARALEAKRKAEEHIKSSHGDVDYAQASAELAKAIAKLRVIELTKKAM
type: Position

IPR036771
comment: ATPsynth_dsu/esu_N
database: InterPro
type: Resource

A0A5V8AH86
annotation: SIP4A72FFDD76442FBE
type: Protein
annotation: SIP06B9A1EB1C018118
classified with: GO_0009246
classified with: GO_0089714
alternative name: SIP301F58E08A455390
modified: 2022-08-03
annotation: SIP40D400010D13D26B
version: 8
existence: Inferred from Homology Existence
mnemonic: A0A5V8AH86_SALET
annotation: SIP02BE7B2886354191
classified with: GO_0016628
annotation: SIPEED41F0B3755A3BE
classified with: http://purl.uniprot.org/keywords/560
annotation: SIPB4FFA2C97A67E954
organism: http://purl.uniprot.org/taxonomy/143221
enzyme: http://purl.uniprot.org/enzyme/1.1.1.336
annotation: SIP353F1C0574BABFF7
created: 2020-04-22
classified with: http://purl.uniprot.org/keywords/520
annotation: SIPC701E70FC6FC6DF6
annotation: SIP0598FCCFBD915957
classified with: GO_0051287
citation: SIP73C221B32726F3D8
sequence: A0A5V8AH86-1
reviewed: false
proteome: Unassembled WGS sequence
annotation: SIP34B9D60E49160EAD
annotation: SIP38BBDA12B3129184
annotation: SIPC242EB7E3C135F22
annotation: SIP076AC9B5613A7AF4
annotation: SIPDE4DAF119FF72C1E
annotation: SIP6EFECFB02E76CFC6
annotation: SIPFE056DFD0BCF4822
recommended name: SIP68FB7ADBCAA19E5B

SIP73C221B32726F3D8
date: 2019-03
author: De Pinna E.
author: Peters T.
author: Dallman T.
author: Grant K.
submitted to: EMBL/GenBank/DDBJ
author: Nair S.
author: Ashton P.M.
type: Submission Citation

SSF52413
database: SUPFAM
type: Resource
signature sequence match: SUPFAM SSF52413 match 1
comment: SSF52413

-9218562325152131026tt160
position: 160
reference: A0A5V8AH86-1
type: Position
type: ExactPosition

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP68FB7ADBCAA19E5B
full name: UDP-N-acetyl-D-mannosamine dehydrogenase
type: Structured Name
ec name: 1.1.1.336

SIP6EFECFB02E76CFC6
range: -9218562325152131026tt216tt219
comment: Substrate binding
type: Region Annotation

SIP301F58E08A455390
type: Structured Name
full name: UDP-ManNAc 6-dehydrogenase

SSF48179
signature sequence match: SUPFAM SSF48179 match 1
type: Resource
database: SUPFAM
comment: SSF48179

MF_02029
signature sequence match: HAMAP MF 02029 match 1
comment: WecC_RffD
database: HAMAP
type: Resource

A0A5V8AH86-1
version: 1
modified: 2020-04-22
value: MSFTTISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPALGNVVKMAVEGGFLRATTTPVEADAYLIAVPTPFKGEHDPDMAYVEAAAKSIAPVLKKGALVILESTSPVGATEQMAGWLAGMRPDLTFPQQAGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGMTPVCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICAEQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDGKPHWVVDQVKAAVADCLAATDKRASEVKIACFGLAFKPNIDDLRESPAMGIAQSIARWHSGETLVVEPNIRQLPKKLDGLCTLAKLDAALAAADVLVMLVDHDEFKAIPGDAVHQRYVVDTKGVWR
mass: 45307
type: Simple Sequence

SIP34B9D60E49160EAD
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

SIP076AC9B5613A7AF4
type: Subunit Annotation
comment: Homodimer.

-9218562325152131026tt324
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 324

-9218562325152131026tt15
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 15

-9218562325152131026tt161
position: 161
type: Position
reference: A0A5V8AH86-1
type: ExactPosition

SIP4A72FFDD76442FBE
comment: Substrate binding; shared with dimeric partner
type: Region Annotation
range: -9218562325152131026tt250tt252

-9218562325152131026tt10
reference: A0A5V8AH86-1
position: 10
type: Position
type: ExactPosition

SIP353F1C0574BABFF7
comment: Substrate binding
type: Region Annotation
range: -9218562325152131026tt330tt331

PF03721
signature sequence match: Pfam PF03721 match 1
type: Resource
database: Pfam
comment: UDPG_MGDP_dh_N

IPR001732
type: Resource
database: InterPro
comment: UDP-Glc/GDP-Man_DH_N

PF00984
signature sequence match: Pfam PF00984 match 1
comment: UDPG_MGDP_dh
type: Resource
database: Pfam

-9218562325152131026tt216
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 216

IPR017476
comment: UDP-Glc/GDP-Man
type: Resource
database: InterPro

-9218562325152131026tt219
reference: A0A5V8AH86-1
type: Position
position: 219
type: ExactPosition

-9218562325152131026tt212
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 212

-9218562325152131026tt331
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 331

-9218562325152131026tt330
reference: A0A5V8AH86-1
type: Position
type: ExactPosition
position: 330

PIRSF500136
signature sequence match: PIRSF PIRSF500136 match 1
database: PIRSF
comment: UDP_ManNAc_DH
type: Resource

-9218562325152131026tt250
type: Position
reference: A0A5V8AH86-1
position: 250
type: ExactPosition

-9218562325152131026tt263
reference: A0A5V8AH86-1
type: Position
position: 263
type: ExactPosition

-9218562325152131026tt266
reference: A0A5V8AH86-1
type: Position
position: 266
type: ExactPosition

-9218562325152131026tt252
type: Position
reference: A0A5V8AH86-1
position: 252
type: ExactPosition

PF03720
comment: UDPG_MGDP_dh_C
type: Resource
database: Pfam
signature sequence match: Pfam PF03720 match 1

PIRSF000124
comment: UDPglc_GDPman_dh
signature sequence match: PIRSF PIRSF000124 match 1
type: Resource
database: PIRSF

IPR032891
type: Resource
database: InterPro
comment: WecC

SSF51735
database: SUPFAM
signature sequence match: SUPFAM SSF51735 match 1
comment: SSF51735
type: Resource

SIP40D400010D13D26B
range: -9218562325152131026tt212tt212
type: Active Site Annotation
comment: Proton donor/acceptor

SIPB4FFA2C97A67E954
type: Similarity Annotation
comment: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.

SIP02BE7B2886354191
comment: Substrate binding
range: -9218562325152131026tt160tt161
type: Region Annotation

IPR008927
comment: 6-PGluconate_DH-like_C_sf
type: Resource
database: InterPro

IPR028359
comment: UDP_ManNAc/GlcNAc_DH
database: InterPro
type: Resource

SIP0598FCCFBD915957
comment: UDPG_MGDP_dh_C
range: -9218562325152131026tt324tt420
type: Domain Extent Annotation

SM00984
signature sequence match: SMART SM00984 match 1
type: Resource
comment: UDPG_MGDP_dh_C
database: SMART

SIP06B9A1EB1C018118
type: Function Annotation
comment: Catalyzes the four-electron oxidation of UDP-N-acetyl-D-mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N-acetylmannosaminuronic acid (UDP-ManNAcA).

wecC
orf name: E0563_15340
type: Gene
orf name: DKV27_18500
orf name: CC786_22500

IPR014026
comment: UDP-Glc/GDP-Man_DH_dimer
type: Resource
database: InterPro

-9218562325152131026tt420
type: Position
type: ExactPosition
position: 420
reference: A0A5V8AH86-1

IPR036291
type: Resource
database: InterPro
comment: NAD(P)-bd_dom_sf

IPR014027
type: Resource
database: InterPro
comment: UDP-Glc/GDP-Man_DH_C

365393
type: Strain

285585
type: Strain

TIGR03026
comment: NDP-sugDHase
type: Resource
database: TIGRFAMs
signature sequence match: TIGRFAMs TIGR03026 match 1

IPR036220
database: InterPro
type: Resource
comment: UDP-Glc/GDP-Man_DH_C_sf

176244
type: Strain

SIP38BBDA12B3129184
type: Active Site Annotation
range: -9218562325152131026tt266tt266
comment: Nucleophile

substrate

22860235362546990tt157
type: ExactPosition
position: 157
type: Position
reference: Q7CPD5-1

22860235362546990tt20
reference: Q7CPD5-1
type: ExactPosition
position: 20
type: Position

PS01218
signature sequence match: PROSITE PS01218 match 1
database: PROSITE
comment: TATC
type: Resource

Q7CPD5
mnemonic: Q7CPD5_SALTY
annotation: SIP4F254D7B14A9AFAA
organism: http://purl.uniprot.org/taxonomy/99287
classified with: GO_0033281
citation: SIPEDB01CE8E688BD33
created: 2004-07-05
annotation: SIP85E8890F9097A44D
citation: SIPAD9020B65273EAAE
annotation: SIP96E72BA81AEBCF49
citation: http://purl.uniprot.org/citations/11677609
type: Protein
annotation: SIPD752440DDB6F88CE
annotation: SIP92DCD7BFF12211DB
annotation: SIP904581196B9859F7
citation: SIP102B1EB43405841C
classified with: http://purl.uniprot.org/keywords/1185
replaces: Q7BM07
classified with: http://purl.uniprot.org/keywords/811
existence: Inferred from Homology Existence
reviewed: false
annotation: SIP84703CA80759599F
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0009977
citation: SIP9759901DB3C7E8BF
version: 85
annotation: SIPF787C00734BA22C0
classified with: http://purl.uniprot.org/keywords/997
annotation: SIP366C7874CF8177AD
classified with: GO_0005887
modified: 2022-08-03
recommended name: SIP857BC4972597C5F5
classified with: GO_0043953
classified with: GO_0065002
sequence: Q7CPD5-1
proteome: Chromosome
annotation: SIP5DFE9D44CAAC50B5

Q7CPD5-citation-SIP9759901DB3C7E8BF
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP366C7874CF8177AD
comment: The Tat system comprises two distinct complexes: a TatABC complex, containing multiple copies of TatA, TatB and TatC subunits, and a separate TatA complex, containing only TatA subunits. Substrates initially bind to the TatABC complex, which probably triggers association of the separate TatA complex to form the active translocon.
type: Subunit Annotation

SIP857BC4972597C5F5
full name: Sec-independent protein translocase protein TatC
type: Structured Name

PR01840
database: PRINTS
type: Resource
comment: TATCFAMILY

22860235362546990tt218
position: 218
type: Position
reference: Q7CPD5-1
type: ExactPosition

22860235362546990tt95
type: Position
position: 95
reference: Q7CPD5-1
type: ExactPosition

SIP9759901DB3C7E8BF
submitted to: EMBL/GenBank/DDBJ
date: 2000-02
author: Waterston R.
type: Submission Citation

Q7CPD5-citation-11677609
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR019820
type: Resource
comment: Sec-indep_translocase_CS
database: InterPro

SIP92DCD7BFF12211DB
type: Transmembrane Annotation
range: 22860235362546990tt195tt212
comment: Helical

SIPEDB01CE8E688BD33
type: Submission Citation
author: SanMiguel P.
author: Westerman R.
author: McClelland M.
author: Jain A.
author: Saraogi P.
author: Mendelson R.
submitted to: EMBL/GenBank/DDBJ
author: Csonka L.
date: 2016-01

PF00902
signature sequence match: Pfam PF00902 match 1
type: Resource
database: Pfam
comment: TatC

Q7CPD5-1
type: Simple Sequence
modified: 2004-07-05
mass: 29073
value: MAVEDTQPLITHLIELRKRLLNCIVAVLLIFLALIYFANDIYHLVAAPLIKQMPQGATMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLTHTAPEGVQVSTDIASYLSFVMALFMAFGVAFEVPVAIVLLCWMGITTPEDLRKKRPYILVGAFIVGMLLTPPDVFSQTLLAIPMYCLFEIGVFCSRFYVGKRRTRDEDNEAETEKAEHTED
version: 1

LT2
type: Strain

IPR002033
comment: TatC
type: Resource
database: InterPro

SIP4F254D7B14A9AFAA
range: 22860235362546990tt20tt38
type: Transmembrane Annotation
comment: Helical

PTHR30371
database: PANTHER
type: Resource
signature sequence match: PANTHER PTHR30371 match 1
comment: PTHR30371

22860235362546990tt195
reference: Q7CPD5-1
type: ExactPosition
position: 195
type: Position

22860235362546990tt183
position: 183
type: ExactPosition
reference: Q7CPD5-1
type: Position

22860235362546990tt212
type: Position
reference: Q7CPD5-1
type: ExactPosition
position: 212

http://purl.uniprot.org/uniprot/Q7CPD5#attribution-4D7F72A356C1855D0A9FA246AE0C711F
source: http://purl.uniprot.org/citations/21873635
creator: GO Central
manual: true
evidence: ECO_0000318

SIP84703CA80759599F
type: Transmembrane Annotation
comment: Helical
range: 22860235362546990tt74tt95

22860235362546990tt74
type: Position
position: 74
reference: Q7CPD5-1
type: ExactPosition

SIPD752440DDB6F88CE
comment: Helical
range: 22860235362546990tt157tt183
type: Transmembrane Annotation

SIP904581196B9859F7
range: 22860235362546990tt218tt237
comment: Helical
type: Transmembrane Annotation

TIGR00945
type: Resource
signature sequence match: TIGRFAMs TIGR00945 match 1
comment: tatC
database: TIGRFAMs

22860235362546990tt237
position: 237
type: Position
reference: Q7CPD5-1
type: ExactPosition

Q7CPD5-citation-SIPEDB01CE8E688BD33
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIPAD9020B65273EAAE
date: 2001-03
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
group: The Salmonella typhimurium Genome Sequencing Project

tatC
locus name: STM3975
type: Gene

Q7CPD5-citation-SIP102B1EB43405841C
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP102B1EB43405841C
type: Submission Citation
title: The Salmonella typhimurium Genome Sequencing Project.
date: 2000-02
submitted to: EMBL/GenBank/DDBJ
author: WashU

SIP5DFE9D44CAAC50B5
type: Similarity Annotation
comment: Belongs to the TatC family.

22860235362546990tt116
type: Position
reference: Q7CPD5-1
position: 116
type: ExactPosition

22860235362546990tt137
position: 137
type: Position
reference: Q7CPD5-1
type: ExactPosition

22860235362546990tt38
position: 38
type: ExactPosition
reference: Q7CPD5-1
type: Position

SIPF787C00734BA22C0
type: Transmembrane Annotation
comment: Helical
range: 22860235362546990tt116tt137

LT2 / SGSC1412 / ATCC 700720
type: Strain

MF_00902
database: HAMAP
type: Resource
comment: TatC
signature sequence match: HAMAP MF 00902 match 1

Q7CPD5-citation-SIPAD9020B65273EAAE
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SGSC1412
type: Strain

SIP96E72BA81AEBCF49
comment: Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
type: Function Annotation

SIP7EDC284B729CB1EA
author: Mehta A.
author: Aluvathingal J.
author: Sciortino C.
author: Tallon L.
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests.
type: Submission Citation
author: Nandy P.
author: Vavikolanu K.
submitted to: EMBL/GenBank/DDBJ
author: Sichtig H.
author: Geyer C.
date: 2019-09
author: Yan Y.
author: Nadendla S.
author: Sadzewicz L.

A0A2X2ET59-1
type: Simple Sequence
version: 1
value: MTRTTPNVSFEFFPTKTEAGHEKLLNTARQLAGYSPEFFSCTYGAGGSTRDRTLNTVLQLDSEIRIPTAPHLSCVGDSKAELRDLLIRYREAGITRIVALRGDLPSGMGISGGELRYANELVSFIREETGDHFHIEVAAYPEVHPQARNFEADLANFVRKIKAGANGAITQYFFNADSYFHFVDRACKLGADVPIIPGIMPITNYSSLARFSEACGAEIPRWIRKQLEAYADDVKSIQAFGQEIVTDMCERLLAGGAPALHFYTLNQAEPSLAIWNNLGFKS
mass: 31191
modified: 2018-09-12

A0A2X2ET59
mnemonic: A0A2X2ET59_PSELU
classified with: GO_0009086
classified with: GO_0035999
created: 2018-09-12
annotation: SIP884E29C8FA1F547E
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/560
annotation: SIP42B32D9D0F29487E
annotation: SIP1D5F72531A7E4F22
type: Protein
classified with: http://purl.uniprot.org/keywords/274
classified with: GO_0004489
citation: SIP7EDC284B729CB1EA
enzyme: http://purl.uniprot.org/enzyme/1.5.1.20
organism: http://purl.uniprot.org/taxonomy/47886
proteome: Chromosome 1
annotation: SIP9662DFA5363DC9B1
reviewed: false
citation: SIPD2E413730CF96E32
modified: 2022-08-03
classified with: http://purl.uniprot.org/keywords/520
classified with: GO_0005829
annotation: SIP1CA0F60885F7ADD8
sequence: A0A2X2ET59-1
proteome: Unassembled WGS sequence
recommended name: SIP41497F08E8FAA8EA
version: 15

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

metF
orf name: FOB45_09115
orf name: NCTC11842_03815
type: Gene

TIGR00676
signature sequence match: TIGRFAMs TIGR00676 match 1
type: Resource
comment: fadh2
database: TIGRFAMs

IPR029041
database: InterPro
type: Resource
comment: FAD-linked_oxidoreductase-like

cd00537
database: CDD
type: Resource
signature sequence match: CDD cd00537 match 1
comment: MTHFR

SIPD2E413730CF96E32
type: Submission Citation
group: Pathogen Informatics
submitted to: EMBL/GenBank/DDBJ
date: 2018-06
author: Doyle S.

IPR004620
comment: MTHF_reductase_bac
type: Resource
database: InterPro

NCTC11842
type: Strain

SSF51730
comment: SSF51730
database: SUPFAM
signature sequence match: SUPFAM SSF51730 match 1
type: Resource

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

IPR003171
comment: Mehydrof_redctse-like
type: Resource
database: InterPro

PF02219
type: Resource
comment: MTHFR
database: Pfam
signature sequence match: Pfam PF02219 match 1

FDAARGOS_637
type: Strain

SIP42B32D9D0F29487E
type: Similarity Annotation
comment: Belongs to the methylenetetrahydrofolate reductase family.

SIP41497F08E8FAA8EA
full name: Methylenetetrahydrofolate reductase
ec name: 1.5.1.20
type: Structured Name

SIP2739A1A94EB6BE21
author: Grant K.
author: Dallman T.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Nair S.
author: De Pinna E.
date: 2019-08
author: Peters T.
author: Ashton P.M.

A0A2X5B840
mnemonic: A0A2X5B840_SALET
sequence: A0A2X5B840-1
annotation: SIPEF86E1D6F75F7710
organism: http://purl.uniprot.org/taxonomy/59201
recommended name: SIPCAF3A710376FC912
annotation: SIP2DD97A6413C2734F
type: Protein
existence: Inferred from Homology Existence
version: 27
created: 2018-09-12
classified with: GO_0009063
enzyme: http://purl.uniprot.org/enzyme/5.1.1.-
proteome: Chromosome 1
citation: SIPA5FB095315502327
annotation: SIP2C4FD20A4D41ABF9
classified with: GO_0016855
annotation: SIPBB484FA328100F72
citation: http://purl.uniprot.org/citations/30286803
classified with: http://purl.uniprot.org/keywords/479
annotation: SIP8DB7C746BFF9702F
annotation: SIPB1F9B24886F10910
citation: SIPD622B3134EFF08E5
citation: SIP9AD53E7D6A471F38
reviewed: false
annotation: SIPBAC54290F9E6DF11
classified with: http://purl.uniprot.org/keywords/413
annotation: SIPF1627633122FA13F
citation: SIP2739A1A94EB6BE21
modified: 2022-08-03
citation: SIPF1DB69A1DEB4A0F2
classified with: http://purl.uniprot.org/keywords/460
classified with: GO_0046872

SSF51604
signature sequence match: SUPFAM SSF51604 match 1
comment: SSF51604
database: SUPFAM
type: Resource

FDA00001697
type: Strain

SSF54826
database: SUPFAM
signature sequence match: SUPFAM SSF54826 match 1
type: Resource
comment: SSF54826

CFSAN002014
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SM00922
type: Resource
signature sequence match: SMART SM00922 match 1
database: SMART
comment: MR_MLE

IPR029065
type: Resource
database: InterPro
comment: Enolase_C-like

A0A2X5B840-citation-30286803
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

ycjG
orf name: AIE18_19655
orf name: AH079_02120
orf name: G1H77_04385
orf name: G1H51_04455
orf name: FZ516_02510
orf name: G0D64_03630
orf name: NCTC129_06374
orf name: G1I19_04455
type: Gene
orf name: GBZ60_00955
orf name: DOW74_05725
orf name: VL99_10705
orf name: XB36_010195
orf name: G0D71_20200
orf name: AXN36_11430
orf name: GBW64_00955
orf name: AXO93_00365

SIPCAF3A710376FC912
ec name: 5.1.1.-
full name: Dipeptide epimerase
type: Structured Name

13-0328
type: Strain

Salmonella enterica
type: Strain

IPR029017
database: InterPro
type: Resource
comment: Enolase-like_N

CFSAN031465
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PTHR48080
signature sequence match: PANTHER PTHR48080 match 2
comment: PTHR48080
type: Resource
database: PANTHER
signature sequence match: PANTHER PTHR48080 match 1

SIPF1DB69A1DEB4A0F2
group: NCBI Pathogen Detection Project
submitted to: EMBL/GenBank/DDBJ
date: 2018-07
type: Submission Citation

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR034603
database: InterPro
type: Resource
comment: Dipeptide_epimerase

-9218575394687352786tt202
position: 202
type: Position
reference: A0A2X5B840-1
type: ExactPosition

A0A2X5B840-1
type: Simple Sequence
value: MRSVKVYEETWPLHTPFVIARGSRSEAHVVVVELEEEGVKGIGECTPYPRYGESDASVMAQIMSIVPQLENGLTREALQKLLPAGAARNAVDSALWDLQARQRQQSLAGLLGVTLAPVFTTAQTVVIGTPEQMAASAAALWEKGATLLKIKLDARLISERMVAIRSAVPEATLIVDANESWRPEGLAARCQLLADLNVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSSLKALTGRYDMINIKLDKTGGLTEALALATEAREQGFGLMLGCMLCTSRAISAALPLMPQVSFADLDGPTWLAVDVEPALRFTTGQLHL
mass: 34620
modified: 2018-09-12
version: 1

CFSAN029662
type: Strain

SIPB1F9B24886F10910
range: -9218575394687352786tt247tt247
type: Active Site Annotation
comment: Proton acceptor; specific for (S)-substrate epimerization

IPR036849
database: InterPro
comment: Enolase-like_C_sf
type: Resource

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIPD622B3134EFF08E5
submitted to: EMBL/GenBank/DDBJ
group: Pathogen Informatics
type: Submission Citation
date: 2018-12

PS00909
signature sequence match: PROSITE PS00909 match 1
type: Resource
comment: MR_MLE_2
database: PROSITE

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

795087
type: Strain

SIPBB484FA328100F72
comment: Proton acceptor; specific for (R)-substrate epimerization
range: -9218575394687352786tt151tt151
type: Active Site Annotation

IPR018110
type: Resource
comment: Mandel_Rmase/mucon_lact_enz_CS
database: InterPro

cd03319
type: Resource
comment: L-Ala-DL-Glu_epimerase
signature sequence match: CDD cd03319 match 1
database: CDD

PF02746
comment: MR_MLE_N
type: Resource
signature sequence match: Pfam PF02746 match 1
database: Pfam

-9218575394687352786tt176
position: 176
type: ExactPosition
type: Position
reference: A0A2X5B840-1

SIPEF86E1D6F75F7710
comment: Belongs to the mandelate racemase/muconate lactonizing enzyme family.
type: Similarity Annotation

PF13378
database: Pfam
signature sequence match: Pfam PF13378 match 1
comment: MR_MLE_C
type: Resource

424645
type: Strain

PS00908
type: Resource
comment: MR_MLE_1
signature sequence match: PROSITE PS00908 match 1
database: PROSITE

-9218575394687352786tt223
position: 223
type: Position
reference: A0A2X5B840-1
type: ExactPosition

-9218575394687352786tt225
position: 225
type: Position
reference: A0A2X5B840-1
type: ExactPosition

SFLDF00010
comment: dipeptide_epimerase
database: SFLD
type: Resource
signature sequence match: SFLD SFLDF00010 match 1

NCTC129
type: Strain

IPR034593
comment: Mandelate_racemase_DgoD-like
database: InterPro
type: Resource

SIP8DB7C746BFF9702F
type: Domain Extent Annotation
range: -9218575394687352786tt130tt223
comment: MR_MLE

-9218575394687352786tt151
reference: A0A2X5B840-1
type: ExactPosition
position: 151
type: Position

-9218575394687352786tt130
position: 130
reference: A0A2X5B840-1
type: Position
type: ExactPosition

-9218575394687352786tt247
type: Position
reference: A0A2X5B840-1
position: 247
type: ExactPosition

SIPBAC54290F9E6DF11
cofactor: CHEBI_18420
type: Cofactor Annotation
comment: Binds 1 Mg(2+) ion per subunit.

13-0166
type: Strain

CFSAN031622
type: Strain

IPR013342
comment: Mandelate_racemase_C
type: Resource
database: InterPro

IPR013341
type: Resource
comment: Mandelate_racemase_N_dom
database: InterPro

Salmonella enterica subsp. enterica
type: Strain

FDA00003717
type: Strain

A0A617JMQ0
citation: http://purl.uniprot.org/citations/30286803
proteome: Unassembled WGS sequence
annotation: SIP2086936B240836F4
alternative name: SIP32365F624DEBB3D4
classified with: http://purl.uniprot.org/keywords/238
annotation: SIP2AEE7ACAAB87CD17
annotation: SIPE5363869F1CA0D1B
created: 2020-04-22
classified with: http://purl.uniprot.org/keywords/226
type: Protein
classified with: http://purl.uniprot.org/keywords/963
version: 11
classified with: GO_0051301
classified with: http://purl.uniprot.org/keywords/175
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/132
annotation: SIPB197B2C131654D81
organism: http://purl.uniprot.org/taxonomy/28144
annotation: SIP44BB069770129E72
classified with: GO_0003677
classified with: http://purl.uniprot.org/keywords/67
annotation: SIP1E544C2514CF1EDF
reviewed: false
annotation: SIP530E598B86DBEA38
citation: http://purl.uniprot.org/citations/30902850
annotation: SIP9FFC37535B984234
mnemonic: A0A617JMQ0_SALDE
citation: SIPF1DB69A1DEB4A0F2
annotation: SIP63C7D2CB5673DE8C
annotation: SIP37BB0616B6155A83
annotation: SIP10B121B088F051D3
classified with: http://purl.uniprot.org/keywords/159
recommended name: SIP21614BB244FBB1D8
classified with: GO_0005737
annotation: SIPEDA2534C96F121FA
classified with: GO_0009295
annotation: SIP8A49693F4E520468
annotation: SIP983A8F17ACCB309D
annotation: SIPCAD3A1D8583D7E4E
sequence: A0A617JMQ0-1
classified with: GO_0030261
classified with: GO_0005524
classified with: GO_0007059
modified: 2022-08-03
classified with: GO_0007049
classified with: GO_0006260

SIP2086936B240836F4
type: Function Annotation
comment: Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division.

IPR027417
database: InterPro
type: Resource
comment: P-loop_NTPase

-9218560473411600338tt515
reference: A0A617JMQ0-1
type: Position
position: 515
type: ExactPosition

A0A617JMQ0-citation-30902850
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218560473411600338tt343
position: 343
type: ExactPosition
type: Position
reference: A0A617JMQ0-1

-9218560473411600338tt2
type: Position
reference: A0A617JMQ0-1
position: 2
type: ExactPosition

IPR042501
comment: MukB_hinge_sf
database: InterPro
type: Resource

SIPE5363869F1CA0D1B
type: Caution Annotation
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

-9218560473411600338tt1069
position: 1069
reference: A0A617JMQ0-1
type: ExactPosition
type: Position

SSF52540
comment: SSF52540
type: Resource
signature sequence match: SUPFAM SSF52540 match 1
signature sequence match: SUPFAM SSF52540 match 2
database: SUPFAM
signature sequence match: SUPFAM SSF52540 match 3
signature sequence match: SUPFAM SSF52540 match 4

-9218560473411600338tt666
position: 666
type: ExactPosition
type: Position
reference: A0A617JMQ0-1

A0A617JMQ0-citation-30286803
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP63C7D2CB5673DE8C
comment: Flexible hinge
type: Region Annotation
range: -9218560473411600338tt666tt783

SIPCAD3A1D8583D7E4E
comment: Homodimerization via its hinge domain. Binds to DNA via its C-terminal region. Interacts, and probably forms a ternary complex, with MukE and MukF via its C-terminal region. The complex formation is stimulated by calcium or magnesium. Interacts with tubulin-related protein FtsZ.
type: Subunit Annotation

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP37BB0616B6155A83
type: Domain Extent Annotation
range: -9218560473411600338tt645tt810
comment: MukB_hinge

A0A617JMQ0-1
version: 1
mass: 170072
type: Simple Sequence
value: MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLSLAELKDKLDEMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRLTLEAIRVTQSDRDLFKHLISEATDYVAADYMRHANERRVHLDQALAFRRELYTSRKQLAAEQYKHVDMARELGEHNGAEGSLEADYQAASDHLNLVQTALRQQEKIERYEADLEELQIRLEEQNEVVAEAAEMQDENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAISALARAKELCHLPDLTPESAAEWLDTFQAKEQEATEKLLSLEQKMSVAQTAHSQFEQAYQLVAAINGPLARSEAWDVARELLRDGVNQRHLAEQVQPLRMRLSELEQRLREQQEAERLLAEFCKRQGKNFDIDELEALHQELEARIASLSDSVSSASEQRMALRQEQEQLQSRIQHLMRRAPVWLAAQNSLNQLSEQCGEEFTSSQEVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGAEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQIAEQLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPSLPIFGRAARENRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLSVAFEDDPEAEIRRLNGRRVELERALATHESDNQQQRIQFEQAKEGVSALNRLLPRLNLLADETLADRVDEIQERLDEAQEAARFVQQYGNQLAKLEPVVSVLQSDPEQFEQLKEDYAWSQQMQRDARQQAFALAEVVERRAHFSYSDSAEMLSGNSDLNEKLRQRLEQAEAERTRAREALRSHAAQLSQYSQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARQRRDELHAQLSNNRSRRNQLEKALTFCEAEMENLTRKLRKLERDYHEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADELRSMSDKALGALRLAVADNEHLRDVLRLSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQSVSFGQVNSVRLNVNVRETHATLLDVLSEQQEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDEARRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTQTEDTPSEAS
modified: 2020-04-22

PF16330
signature sequence match: Pfam PF16330 match 1
database: Pfam
comment: MukB_hinge
type: Resource

mukB
orf name: GNC20_003447
type: Gene
orf name: FG671_008880

SIP8A49693F4E520468
range: -9218560473411600338tt2tt227
type: Domain Extent Annotation
comment: MukB

PF04310
comment: MukB
signature sequence match: Pfam PF04310 match 1
database: Pfam
type: Resource

PIRSF005246
type: Resource
database: PIRSF
comment: MukB
signature sequence match: PIRSF PIRSF005246 match 1

-9218560473411600338tt34
type: ExactPosition
position: 34
type: Position
reference: A0A617JMQ0-1

-9218560473411600338tt838
type: Position
reference: A0A617JMQ0-1
type: ExactPosition
position: 838

-9218560473411600338tt1049
type: ExactPosition
reference: A0A617JMQ0-1
type: Position
position: 1049

SIP1E544C2514CF1EDF
type: Domain Annotation
comment: The hinge domain, which separates the large intramolecular coiled coil regions, allows the homodimerization, forming a V-shaped homodimer.

-9218560473411600338tt600
reference: A0A617JMQ0-1
type: Position
position: 600
type: ExactPosition

IPR032520
comment: MukB_hinge
type: Resource
database: InterPro

SIP44BB069770129E72
type: Subcellular Location Annotation
located in: SIP664F77CB7530AADE
comment: Restricted to the nucleoid region.

MF_01800
type: Resource
comment: MukB
signature sequence match: HAMAP MF 01800 match 1
database: HAMAP

-9218560473411600338tt810
position: 810
type: ExactPosition
reference: A0A617JMQ0-1
type: Position

-9218560473411600338tt783
type: Position
position: 783
type: ExactPosition
reference: A0A617JMQ0-1

-9218560473411600338tt1074
reference: A0A617JMQ0-1
type: ExactPosition
position: 1074
type: Position

-9218560473411600338tt412
type: Position
type: ExactPosition
reference: A0A617JMQ0-1
position: 412

IPR012090
database: InterPro
comment: MukB
type: Resource

-9218560473411600338tt41
position: 41
type: Position
reference: A0A617JMQ0-1
type: ExactPosition

SIP530E598B86DBEA38
range: -9218560473411600338tt1049tt1074
type: Region Annotation
comment: Disordered

-9218560473411600338tt915
type: ExactPosition
position: 915
reference: A0A617JMQ0-1
type: Position

NVSL 5283
type: Strain

SIP9FFC37535B984234
comment: Basic and acidic residues
range: -9218560473411600338tt1049tt1069
type: Compositional Bias Annotation

IPR007406
comment: MukB_N_dom
database: InterPro
type: Resource

HIY0144
type: Strain

-9218560473411600338tt227
type: ExactPosition
reference: A0A617JMQ0-1
type: Position
position: 227

-9218560473411600338tt645
type: Position
position: 645
type: ExactPosition
reference: A0A617JMQ0-1

SIP32365F624DEBB3D4
type: Structured Name
full name: Structural maintenance of chromosome-related protein

SIP21614BB244FBB1D8
full name: Chromosome partition protein MukB
type: Structured Name

SIP10B121B088F051D3
comment: Belongs to the SMC family. MukB subfamily.
type: Similarity Annotation

TIGR01205
type: Resource
database: TIGRFAMs
comment: D_ala_D_alaTIGR
signature sequence match: TIGRFAMs TIGR01205 match 1

e2161
type: Strain

IPR011095
type: Resource
database: InterPro
comment: Dala_Dala_lig_C

V3F8A7
annotation: SIPA24F06A014BB5B9A
annotation: SIP6E2BEEC6B788011F
proteome: Unassembled WGS sequence
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/464
replaces: A0A155AV88
annotation: SIP87DC5F4D53DA14D7
organism: http://purl.uniprot.org/taxonomy/1812935
annotation: SIP99B3F0D9285DDEAB
classified with: http://purl.uniprot.org/keywords/67
classified with: GO_0071555
recommended name: SIP97EEA9C6D689407F
replaces: A0A0W2CSA1
classified with: GO_0008360
citation: SIPB72A1796D07CCB3C
annotation: SIP680198217C4B7513
annotation: SIPF0215C4414248D69
annotation: SIP3C8D86565C9B2699
reviewed: false
mnemonic: V3F8A7_9ENTR
sequence: V3F8A7-1
alternative name: SIPB2B37D09B53E5142
type: Protein
version: 51
classified with: http://purl.uniprot.org/keywords/460
annotation: SIP1781B5B2E598E12B
classified with: GO_0046872
classified with: GO_0005737
classified with: GO_0008716
classified with: GO_0005524
classified with: http://purl.uniprot.org/keywords/573
created: 2014-01-22
citation: SIPFBF19BAA389629A4
annotation: SIPE163C440DCE21169
alternative name: SIP68E9DEFDB2526EAF
classified with: GO_0009252
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/479
modified: 2022-08-03
enzyme: http://purl.uniprot.org/enzyme/6.3.2.4

V3F8A7-citation-SIPFBF19BAA389629A4
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR000291
comment: D-Ala_lig_Van_CS
database: InterPro
type: Resource

IPR013815
database: InterPro
type: Resource
comment: ATP_grasp_subdomain_1

ddlB
alternative label: ddl
orf name: A3461_16475
type: Gene
orf name: SAMEA2273443_02160

24263224681641774tt303
type: Position
reference: V3F8A7-1
position: 303
type: ExactPosition

PS00844
type: Resource
comment: DALA_DALA_LIGASE_2
signature sequence match: PROSITE PS00844 match 1
database: PROSITE

PS00843
type: Resource
signature sequence match: PROSITE PS00843 match 1
comment: DALA_DALA_LIGASE_1
database: PROSITE

SIPB2B37D09B53E5142
full name: D-alanylalanine synthetase
type: Structured Name

SIPFBF19BAA389629A4
date: 2016-03
submitted to: EMBL/GenBank/DDBJ
group: Pathogen Informatics
type: Submission Citation

SIP680198217C4B7513
type: Function Annotation
comment: Cell wall formation.

E2161
type: Strain

SIPB72A1796D07CCB3C
author: Thaden J.
author: Mccorrison J.
date: 2016-03
submitted to: EMBL/GenBank/DDBJ
author: Nelson K.
title: WGS of SAMN04578339.
author: Fowler V.
type: Submission Citation
author: Adams M.
author: Sutton G.
author: Sanka R.
author: Nierman W.
author: Brinkac L.

IPR011761
database: InterPro
type: Resource
comment: ATP-grasp

V3F8A7-1
type: Simple Sequence
mass: 32771
value: MADKIAVLSGGTSAEREVSLNSGAAVLAGLREGGVNAHLVDPKEVDVTQLKAMGFDKVFIALHGRGGEDGTLQGLLDLIGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRREFELGLPDSVNARIAELGLPVIVKPSREGSSVGMSKVDKADDLASALALAFQHDDEVLIEKWLSGPEFTVAMLGEEILPSIRIQPAGVFYDYEAKYLSDETQYFCPSGLEAEREADLQSLVLKAWHVLGCQGWGRIDVMQDKDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILDQAG
version: 1
modified: 2014-01-22

IPR016185
database: InterPro
comment: PreATP-grasp_dom_sf
type: Resource

SIP97EEA9C6D689407F
ec name: 6.3.2.4
type: Structured Name
full name: D-alanine--D-alanine ligase

MF_00047
database: HAMAP
type: Resource
comment: Dala_Dala_lig
signature sequence match: HAMAP MF 00047 match 1

SIP3C8D86565C9B2699
type: Domain Extent Annotation
range: 24263224681641774tt101tt303
comment: ATP-grasp

SSF52440
type: Resource
signature sequence match: SUPFAM SSF52440 match 1
database: SUPFAM
comment: SSF52440

GN04673
type: Strain

SIPE163C440DCE21169
cofactor: CHEBI_29035
comment: Binds 2 magnesium or manganese ions per subunit.
cofactor: CHEBI_18420
type: Cofactor Annotation

V3F8A7-citation-SIPB72A1796D07CCB3C
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP1781B5B2E598E12B
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

PF07478
comment: Dala_Dala_lig_C
type: Resource
database: Pfam
signature sequence match: Pfam PF07478 match 1

24263224681641774tt101
type: Position
position: 101
reference: V3F8A7-1
type: ExactPosition

PF01820
type: Resource
signature sequence match: Pfam PF01820 match 1
comment: Dala_Dala_lig_N
database: Pfam

PIRSF039102
database: PIRSF
comment: Ddl/VanB
signature sequence match: PIRSF PIRSF039102 match 1
signature sequence match: PIRSF PIRSF039102 match 2
type: Resource

SIP6E2BEEC6B788011F
comment: Belongs to the D-alanine--D-alanine ligase family.
type: Similarity Annotation

IPR005905
database: InterPro
comment: D_ala_D_ala
type: Resource

IPR011127
database: InterPro
comment: Dala_Dala_lig_N
type: Resource

PS50975
comment: ATP_GRASP
type: Resource
signature sequence match: PROSITE PS50975 match 1
database: PROSITE

SIP68E9DEFDB2526EAF
type: Structured Name
full name: D-Ala-D-Ala ligase

SIP5CBCDBE9DED4C91A
author: Kim Y.-H.
date: 2019-09
submitted to: EMBL/GenBank/DDBJ
title: Genome sequencing of Acinetobacter baumannii strain CAM180.
type: Submission Citation
author: Kim B.K.

SIP7145C6E842CBAEF1
date: 2019-01
title: Whole-Genome Sequences of Acinetobacter spp Isolated From Dairy Cow Manure.
author: Rehman M.A.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

SIPC6E8B3E6BC67C0E3
author: Yoon E.-J.
author: Jeong S.H.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
title: Multiplied blaOXA-23-transposons in the genome of Acinetobacter spp. as an adaptive mechanism for bacteria encountering carbapenems.
author: Yang J.W.
author: Lee H.
author: Lee K.J.
date: 2017-04
author: Kim J.O.
author: Lee K.
author: Kim H.S.

ppiC
orf name: E2533_00990
orf name: CBE85_09785
orf name: EA706_00985
orf name: AYR68_14945
orf name: E1A87_09265
orf name: NCTC13421_00618
orf name: DVA69_05915
orf name: APC21_01950
orf name: ITE13_04865
orf name: CTZ19_03315
orf name: EGM95_03350
orf name: ABUW_0658
orf name: E2538_00815
orf name: E2539_01155
orf name: BS065_03160
orf name: AB945B12_00816
orf name: EA722_08060
orf name: EKS29_16390
orf name: BAA1790NC_0617
orf name: HIN86_03095
orf name: FE003_03120
orf name: FJU76_13130
orf name: DLI72_01915
orf name: ABR2091_3071
orf name: IMO23_14910
orf name: E2540_01870
orf name: F2P40_04230
type: Gene
orf name: D8O08_004450
orf name: E2532_01175
orf name: F4T85_03820
orf name: SAMEA104305385_03185
orf name: E2536_01570
orf name: DLI71_14950
orf name: E1A86_15885
orf name: FDN00_17330
orf name: CPI82_00725
orf name: SI89_01435
orf name: ABKPCSM17A_02428
orf name: G3N53_11980
orf name: CBL15_03080
orf name: FJU42_06670
orf name: B9X95_01990
orf name: AUO97_03150
orf name: EA720_013775
orf name: HBK86_14900
orf name: C2U32_11065
orf name: B7L45_03470
orf name: C6N18_16645
orf name: E2535_00780
orf name: NCTC13305_03083
orf name: SAMEA104305340_00452
orf name: DOL94_02335
orf name: H1058_03515
orf name: FR761_15910
orf name: ABCAM1_3087
orf name: SAMEA104305318_01522
orf name: H0529_19475
orf name: GNY86_14245
orf name: E2534_00880
orf name: FJU36_08970
orf name: A7M90_17050
orf name: APD31_04555
orf name: Aba9201_16845
orf name: E2541_00800
orf name: IAG11_16990
orf name: CSB70_3053
orf name: EA686_18375
orf name: GSE42_16770
orf name: EWO96_12485
alternative label: prsA2_1
alternative label: prsA2_3

V5VA69
proteome: Chromosome
citation: SIP21E2B234BCDFD7A7
version: 78
organism: http://purl.uniprot.org/taxonomy/470
proteome: Unassembled WGS sequence
citation: SIPD73A531548333CD8
citation: SIP6A24225F7CCD2821
citation: SIP4C3A055A24CED0C9
citation: SIP95EAD43B7DE294E8
citation: SIPC6E8B3E6BC67C0E3
sequence: MQTAIVRHILVKDKDLAEQLKKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQFGYHLLEVKFRMTGLR
citation: SIP7B26D481CE92C8EC
citation: SIP994FA9FC3B6D607E
citation: SIPD2E413730CF96E32
submitted name: SIP7DFFE625B66A2CB1
citation: SIP7145C6E842CBAEF1
citation: SIP208ED71BA9A36F46
citation: SIP428EAA15160E7C1E
submitted name: SIP666EA17F3F6226B4
citation: SIP83383BF0E80760F
citation: SIP33102A7E9D55A30A
citation: SIP1C235785769BCF91
citation: http://purl.uniprot.org/citations/25845845
citation: SIPF3D0E6DC362CF8B4
citation: SIPDE122EF3F8AC7A1E
citation: SIPF828D3918CC3C46A
citation: SIP860CC90CDED8CC60
citation: SIP7C1D6E396278D5FB
annotation: SIP8396D42A631A20C3
existence: Predicted Existence
citation: SIP92AD68B446AD8B1E
modified: 2022-08-03
citation: SIPABE466C470E6F0F9
citation: http://purl.uniprot.org/citations/27917170
submitted name: SIPF18397968F9BC884
citation: http://purl.uniprot.org/citations/29137647
citation: SIP40EEEB6B5449A83E
created: 2014-02-19
citation: SIP560FF0D6DDE40E2E
citation: SIP77FD36852892E4A9
citation: SIPD20CB73EDCC25D56
enzyme: http://purl.uniprot.org/enzyme/5.2.1.8
citation: http://purl.uniprot.org/citations/25136007
citation: SIP6A8CF85D691AF963
citation: SIP894968993DD7C68A
citation: SIP4719BF1553D16FBD
citation: SIP9C7BBC9A1F1916E4
classified with: http://purl.uniprot.org/keywords/697
citation: SIP7186207ED95BB6A8
citation: SIPAB37AFE55209C64C
citation: SIP2B6D7DFE44D76436
citation: SIPA12DCE3FFB58EE19
replaces: B0V4Z6
reviewed: false
citation: SIP34CEB23AAA1B4EEA
citation: SIPBD030898B079D013
citation: SIP51C35D635B6F5A2
citation: SIP8E5318F527F5A423
citation: SIP932AB37A8B168672
citation: SIPADF2C41AEC4D1743
citation: SIPF4891046CD00C828
citation: SIPE81B26DD41BC9D13
citation: SIP36BC0D98B391F35A
proteome: Chromosome 1
submitted name: SIPA6644DCAC87B21CE
citation: SIPE19DF8BFEC287AE8
citation: SIP5CBCDBE9DED4C91A
citation: SIPD350E7AC1110B38B
type: Protein
classified with: GO_0003755
mnemonic: V5VA69_ACIBA
citation: SIP24572533BE33B441
citation: SIP9809947E0A4FE8A
proteome: Chromosome I
citation: http://purl.uniprot.org/citations/29437920
citation: SIPDC19F3FC6B4EB345
citation: SIP480CB15102B7433
citation: SIPE543E30571F263FF
citation: SIP67C704A0B071F55B
citation: SIP447259264FCC71C7

SIP2B6D7DFE44D76436
author: Long H.
title: The complete genome of Acinetobacter baumannii strain WCHAB005078.
author: Feng Y.
date: 2018-02
type: Submission Citation
author: Wang X.
submitted to: EMBL/GenBank/DDBJ

V5VA69-citation-SIPDE122EF3F8AC7A1E
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

AB360
type: Strain

V5VA69-citation-SIPABE466C470E6F0F9
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP480CB15102B7433
author: Maria R.S.
submitted to: EMBL/GenBank/DDBJ
title: Distinct mechanisms of dissemination of NDM-1 metallo-beta-betalactamase in Acinetobacter species spp. in Argentina.
date: 2019-09
type: Submission Citation
author: Adams M.D.

V5VA69-citation-SIP4719BF1553D16FBD
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIPE81B26DD41BC9D13
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP95EAD43B7DE294E8
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

E47
type: Strain

V5VA69-citation-SIP67C704A0B071F55B
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIP29AF544A40488463
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP932AB37A8B168672
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
date: 2019-12
author: Nguyen S.-T.

SIP40EEEB6B5449A83E
author: Boueroy P.
author: Hatrongjit R.
author: Kerdsin A.
title: Complete Genome Sequence of Four Extensively Drug-Resistant Acinetobacter buamannii Isolated from Clinical Samples in Thailand.
submitted to: EMBL/GenBank/DDBJ
author: Jenjaroenpun P.
type: Submission Citation
author: Wongsurawat T.
author: Chopjitt P.
date: 2020-07

945B12-12AESBL
type: Strain

SIPDC19F3FC6B4EB345
author: Hujer K.M.
author: Fouts D.E.
author: Biswal M.
author: Fowler V.
author: Gaind R.
author: Sankar M.J.
author: Gautam V.
date: 2019-09
author: Ray P.
type: Submission Citation
author: Huker A.
submitted to: EMBL/GenBank/DDBJ
author: Evans S.
author: Kreiswirth B.
author: Datta S.
author: Adams M.
author: Bonomo R.A.
author: Paul V.
author: Nelson K.E.
author: Patel R.
author: Walia K.
author: Chambers H.C.
author: Clarke T.H.
author: Sutton G.
title: 10 Multi-Drug Resistant Acinetobacter Baumannii Strains for ARLG-ICMR From India.
author: Nierman W.C.

VB82
type: Strain

SIPD5955B8709335A8B
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Wang X.
title: The complete genome of Acinetobacter baumannii strain WCHAB005078.
date: 2019-08
author: Feng Y.
author: Long H.

SIP860CC90CDED8CC60
author: Bonnin R.A.
author: Dortet L.
type: Submission Citation
title: Carbapenemase-producing Acinetobacter spp. from environmental sources in an hospital from French Polynesia.
author: Cuzon G.
date: 2018-06
submitted to: EMBL/GenBank/DDBJ
author: Naas T.
author: Levy M.

V5VA69-citation-SIP6A8CF85D691AF963
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

MDR-CQG
type: Strain

V5VA69-citation-SIP24572533BE33B441
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPE19DF8BFEC287AE8
author: Wibberg D.
date: 2015-12
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

SIP83383BF0E80760F
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Castro-Jaimes S.
date: 2017-08
author: Castillo-Ramirez S.
author: Volkow-Fernandez P.
author: Silva-Sanchez J.
author: Salgado-Camargo A.D.
author: Cevallos M.A.
title: Evolution of Acinetobacter baumannii plasmids.

SIP7C1D6E396278D5FB
group: NISC Comparative Sequencing Program
author: Park M.
author: Johnson R.C.
author: Henderson D.K.
author: Conlan S.
author: Weingarten R.A.
author: Palmore T.N.
author: Odom R.T.
author: Lau A.F.
author: Khil P.
author: Segre J.A.
title: Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance.
author: Dekker J.P.
date: 2018-01
author: Frank K.M.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Deming C.
author: Ramsburg A.M.
author: Thomas P.J.

V5VA69-citation-SIP77FD36852892E4A9
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP994FA9FC3B6D607E
author: Yeo C.C.
author: Alattraqchi A.G.
date: 2020-07
author: Clarke S.
author: A Rahmann
author: Ismail S.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Mohd Ranii
author: Cleary D.
author: NII
author: F
title: Complete genome sequencing of Acinetobacter baumannii AC1633 and Acinetobacter nosocomialis AC1530 unveils a large multidrug resistant plasmid encoding the NDM-1 and OXA-58 carbapenemases.

V5VA69-citation-SIP33102A7E9D55A30A
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP428EAA15160E7C1E
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPD350E7AC1110B38B
date: 2020-04
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Saito R.
title: Whole-genome sequence analysis of carbapanemase producing Acinetobacter baumannii isolates from Ghana.
author: Ayibieke A.

V5VA69-citation-SIP8E5318F527F5A423
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP7B26D481CE92C8EC
author: Riley L.W.
title: A novel plasmid carries a functional mcr-4.3 gene in a colistin-resistant Acinetobacter baumannii clinical strain.
author: Iavarone A.T.
author: Xavier D.E.
author: Oeleman W.
type: Submission Citation
author: Cacci L.C.
author: Mc Gann P.
submitted to: EMBL/GenBank/DDBJ
author: Moreira B.M.
author: Snesrud E.
date: 2018-11
author: Sorenson N.M.

V5VA69-citation-SIP21E2B234BCDFD7A7
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP29AF544A40488463
author: Adams M.
submitted to: EMBL/GenBank/DDBJ
author: Sutton G.
type: Submission Citation
author: seifert H.
author: Xanthopoulou K.
author: Wright M.
author: Venepally P.
author: Higgins P.
date: 2016-11
title: Assembly of Acinetobacter baumannii genome AF-673 with blaOXA-235 gene.

MDR-CQA
type: Strain

SIP4C3A055A24CED0C9
author: Singh M.K.
author: Khan I.
author: Kumar A.
author: Patidar R.
date: 2019-03
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

AR_0070
type: Strain

SIP33102A7E9D55A30A
title: Genetic environment of the oxa23 gene and comparative analysis of carbapenem resistant Acinetobacter baumannii isolates belonging to global clone 1, lineage 2 recovered in a burns hospital outbreak in 2012-2013.
author: Aris P.
author: Hamidian M.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Kenyon J.
date: 2019-10
author: Douraghi M.

Ab-B004d-c
type: Strain

SIP8E5318F527F5A423
author: Ott S.
author: Aluvathingal J.
author: Brown A.
author: Zhao X.
author: McAllister G.
submitted to: EMBL/GenBank/DDBJ
author: Simonyan V.
author: Lutgring J.D.
author: Sadzewicz L.
type: Submission Citation
date: 2018-02
author: Patel J.
author: Shawar R.M.
author: Yoo B.
author: Vavikolanu K.
author: Nadendla S.
author: Halpin A.L.
author: Benahmed F.H.
author: Machado M.
author: Tallon L.
author: Perry A.
author: Voskania-kordi A.
title: FDA/CDC Antimicrobial Resistant Isolate Bank Genome Sequencing.

V5VA69-citation-SIP226B095FCDCEE8D7
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP9809947E0A4FE8A
author: Carrillo C.D.
title: Resistance determinants and their genetic context in bacteria from a longitudinal study of pigs reared under conventional and antibiotic-free husbandry practices.
author: Topp E.
author: Talbot G.
author: Langlois A.
author: Poulin-Laprade D.
author: Brouard J.-S.
date: 2020-09
type: Submission Citation
author: Gagnon N.
author: Matte J.J.
author: Zaheer R.
submitted to: EMBL/GenBank/DDBJ
author: Turcotte A.
author: McAllister T.

SIP428EAA15160E7C1E
author: Joubert M.
author: Ilin A.I.
type: Submission Citation
author: Kenesheva S.T.
author: Suldina N.A.
submitted to: EMBL/GenBank/DDBJ
author: Magabota S.M.
author: Jumagaziyeva A.B.
author: Shvidko S.V.
author: Shilov S.V.
date: 2019-08
author: Korotetskiy I.S.
title: Acinetobacter baumannii genome sequencing and assembly.
author: Reva O.N.

V5VA69-citation-SIP208ED71BA9A36F46
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP67C704A0B071F55B
submitted to: EMBL/GenBank/DDBJ
author: Duvall M.R.
type: Submission Citation
author: Gaut B.S.
author: Morton B.R.
date: 2018-01
author: Clegg M.T.

V5VA69-citation-SIPBD030898B079D013
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIPE81B26DD41BC9D13
author: Phan H.T.T.
author: Walker S.A.
author: Lipworth S.I.
author: Mathers A.J.
author: Gordon K.A.
author: Crook D.
title: Genomic Dynamics of Species and Mobile Genetic Elements in a Prolonged blaIMP-4-associated Carbapenemase Outbreak in an Australian Hospital.
author: Stoesser N.
type: Submission Citation
author: George S.
submitted to: EMBL/GenBank/DDBJ
date: 2019-08
author: Peto T.E.A.

SIP92AD68B446AD8B1E
date: 2016-02
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Hua X.
author: Yu Y.
author: Feng Y.

MDR-CQC
type: Strain

SIP51C35D635B6F5A2
author: Chan K.W.B.
date: 2018-07
author: Wong H.Y.M.
title: blaOXA beta-lactamases are the sole determinants in mediating carbapenem resistance in Acinetobacter baumannii of clinical origins.
author: Chen S.
author: Chan C.W.E.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

V5VA69-citation-SIP894968993DD7C68A
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP560FF0D6DDE40E2E
author: Shinohara D.R.
author: Carrara-Marroni F.E.
author: Tognim M.C.B.
author: Marini P.V.B.
type: Submission Citation
author: Cerdeira L.
date: 2019-11
submitted to: EMBL/GenBank/DDBJ
author: Fuga B.
title: Multidrug-resistant Acinetobacter baumannii moving toward extensively drug-resistant over fifteen years in South of Brazil.
author: Lincopan N.
author: Fedrigo N.H.

SIP6A24225F7CCD2821
submitted to: EMBL/GenBank/DDBJ
author: Vijayakumar S.
type: Submission Citation
author: Vasudevan K.
date: 2020-02
author: Mathur P.
author: Lincy M.
title: Whole genome shot-gun sequencing of clinical Carbapenem resistant A. baumannii.
author: Veeraraghavan B.
author: Kirubananthan A.

SIP8396D42A631A20C3
range: 24265492574648622tt1tt90
comment: PpiC
type: Domain Extent Annotation

V5VA69-citation-SIP7B26D481CE92C8EC
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIPAB37AFE55209C64C
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-27917170
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP7145C6E842CBAEF1
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIPF3D0E6DC362CF8B4
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIPD20CB73EDCC25D56
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Singh M.K.
author: Fernando D.M.
date: 2015-12
author: Kumar A.

MDR-CQE
type: Strain

PF00639
type: Resource
database: Pfam
comment: Rotamase
signature sequence match: Pfam PF00639 match 1

MRSN32875
type: Strain

V5VA69-citation-SIP9C7BBC9A1F1916E4
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

C1T1-2_b
type: Strain

SIP666EA17F3F6226B4
full name: Peptidyl-prolyl cis-trans isomerase C
type: Structured Name

4300STDY7045886
type: Strain

V5VA69-citation-SIP860CC90CDED8CC60
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIP447259264FCC71C7
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP36BC0D98B391F35A
author: Narasimman V.
author: Vasudevan K.
author: Venkatesan M.
type: Submission Citation
date: 2019-05
submitted to: EMBL/GenBank/DDBJ
author: Veeraraghavan B.
title: Carbapenem resistant Acinetobacter baumannii_VB33071_hybrid assembly.
author: Vijayakumar S.

TG31299
type: Strain

V5VA69-citation-SIP40EEEB6B5449A83E
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

9201
type: Strain

TG28175
type: Strain

SIP34CEB23AAA1B4EEA
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Hua X.
author: Yu Y.
date: 2017-05
title: The evolution of oxa-23 in Acinetobacter baumanni.

CAM180-1
type: Strain

MQTAIVRHILVKDKDLAEQLKKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQFGYHLLEVKFRMTGLR
mass: 10699
version: 1
type: Simple Sequence
modified: 2014-02-19

ABS103
type: Strain

V5VA69-citation-SIP51C35D635B6F5A2
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIPD73A531548333CD8
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPF3D0E6DC362CF8B4
author: Yu Y.
date: 2016-05
author: Hua X.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
title: The evolution of Acinetobacter baumannii in vivo.

PS50198
database: PROSITE
type: Resource
signature sequence match: PROSITE PS50198 match 1
comment: PPIC_PPIASE_2

IPR000297
database: InterPro
type: Resource
comment: PPIase_PpiC

V5VA69-citation-SIP36BC0D98B391F35A
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

24265492574648622tt90
type: ExactPosition
position: 90
type: Position
reference: MQTAIVRHILVKDKDLAEQLKKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQFGYHLLEVKFRMTGLR

I43
type: Strain

V5VA69-citation-SIPE543E30571F263FF
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

XH647
type: Strain

SIPF828D3918CC3C46A
author: Sahl J.W.
date: 2018-10
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
title: GWAS and RNA-Seq identify cryptic mechanisms of antimicrobial resistance in Acinetobacter baumannii.

SIP4719BF1553D16FBD
author: Hayden H.S.
author: Bydalek R.
author: Weiss E.J.
author: Brittnacher M.J.
date: 2015-03
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Manoil C.
author: Ramage E.
author: Hager K.R.
author: Miller S.I.
author: Radey M.R.
author: Gallagher L.A.

SIPDE122EF3F8AC7A1E
author: Hauser A.R.
author: Ozer E.A.
date: 2015-10
author: Fitzpatrick M.A.
title: The utility of whole genome sequencing in characterizing Acinetobacter epidemiology and analyzing hospital outbreaks.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

IPR023058
type: Resource
comment: PPIase_PpiC_CS
database: InterPro

V5VA69-citation-SIP34CEB23AAA1B4EEA
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-25136007
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPE543E30571F263FF
title: Comparative genomics and transcriptomics of Acinetobacter baumannii.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Sahl J.
date: 2019-02

V5VA69-citation-SIPF828D3918CC3C46A
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

A86
type: Strain

V5VA69-citation-SIP7C1D6E396278D5FB
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP7DFFE625B66A2CB1
type: Structured Name
full name: Peptidylprolyl isomerase

V5VA69-citation-SIP9809947E0A4FE8A
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP9C7BBC9A1F1916E4
author: Sahl J.W.
date: 2018-10
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

SIPAB37AFE55209C64C
date: 2018-12
author: Singh I.
author: Nguyen K.
author: Fouts D.E.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Sutton G.
title: Na.

SIPABE466C470E6F0F9
type: Submission Citation
title: Diversity of carbapenem-resistant Acinetobacter baumannii and bacteriophage-mediated spread of the Oxa23 carbapenemase.
author: Turner D.
date: 2020-08
author: Mattock J.
author: Evans B.A.
submitted to: EMBL/GenBank/DDBJ
author: Li E.
author: Abouelfetouh A.

SIP77FD36852892E4A9
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
date: 2019-03
author: Jian Z.
title: Resequencing Analysis and Multi-drug Resistance Differences of Acinetobacter baumannii in Chongqing, China.

NCTC13305
type: Strain

TG60155
type: Strain

SIPD73A531548333CD8
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Veeraraghavan B.
author: Vijayakumar S.
date: 2019-02
author: Neeravi A.
author: Venkatesan M.
title: Carbapenem resistant Acinetobacter baumannii_VB31459_hybrid assembly.

V5VA69-citation-SIP5CBCDBE9DED4C91A
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

MDR-CQH
type: Strain

V5VA69-citation-SIP994FA9FC3B6D607E
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR046357
comment: PPIase_dom_sf
database: InterPro
type: Resource

VB33071
type: Strain

SIPF18397968F9BC884
type: Structured Name
full name: PPIC-type PPIASE domain protein

SIP226B095FCDCEE8D7
author: Fallon J.T.
date: 2019-05
title: Optimizing a Whole-Genome Sequencing Data Processing Pipeline for Precision Surveillance of Healthcare-Associated Infections.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Chen D.
author: Huang W.
author: Yin C.
author: Chanza M.
author: Dhand A.
author: Dimitrova N.
author: Wang G.

V5VA69-citation-SIP1C235785769BCF91
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP6A24225F7CCD2821
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP7186207ED95BB6A8
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIPF4891046CD00C828
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP480CB15102B7433
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIP560FF0D6DDE40E2E
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP447259264FCC71C7
author: Blom J.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
date: 2019-12

SIP1C235785769BCF91
author: Soares M.A.
date: 2017-09
author: Mello I.S.
author: Mendes T.A.
title: Draft genome of Acinetobacter baumannii strain I43, a mercury resistant bacteria.
author: Siqueira K.A.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

V5VA69-citation-SIPADF2C41AEC4D1743
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

24265492574648622tt1
type: Position
type: ExactPosition
position: 1
reference: MQTAIVRHILVKDKDLAEQLKKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPVIDKVVFTAAERVLQGPIKSQFGYHLLEVKFRMTGLR

PR350
type: Strain

MDR-CQJ
type: Strain

SIP21E2B234BCDFD7A7
type: Submission Citation
title: Complete genome of Carbapenem Resistant Acinetobacter baumannii.
date: 2020-03
author: Vijayakumar S.
author: Francis L.
author: Veeraraghavan B.
author: Amala A.
author: Kirubananthan A.
submitted to: EMBL/GenBank/DDBJ

MRSN14427
type: Strain

V5VA69-citation-SIPD2E413730CF96E32
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PB364
type: Strain

COG0760
type: Resource
comment: Bacteria
database: eggNOG

6507
type: Strain

SIPADF2C41AEC4D1743
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Segre J.A.
author: Mullikin J.
date: 2018-01

Ab4568
type: Strain

MH5
type: Strain

ABBL070
type: Strain

SIPF4891046CD00C828
title: Draft Genomes of Two Acinetobacter baumannii Isolates from Fatal Necrotizing Fasciitis.
author: Fiester S.E.
submitted to: EMBL/GenBank/DDBJ
date: 2019-11
author: Bethel C.
author: Actis L.A.
author: Charnot-Katsikas A.
author: Arivett B.A.
type: Submission Citation

SIP24572533BE33B441
date: 2017-05
author: Bean D.C.
author: Wareham D.W.
title: Draft genome sequence of MDR A. baumannii AB360.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation

VB31459
type: Strain

V5VA69-citation-SIPA12DCE3FFB58EE19
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

V5VA69-citation-SIP83383BF0E80760F
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPBD030898B079D013
submitted to: EMBL/GenBank/DDBJ
title: A Diverse Panel of Clinical Acinetobacter baumannii for Research Use.
author: Galac M.R.
author: Mcgann P.
type: Submission Citation
author: Snesrud E.
date: 2019-06

SIPA6644DCAC87B21CE
full name: Peptidyl-prolyl cis-trans isomerase
type: Structured Name
ec name: 5.2.1.8

SIPA12DCE3FFB58EE19
date: 2016-12
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
author: Kumar A.
author: Fernando D.
author: Singh M.

V5VA69-citation-SIP932AB37A8B168672
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

AMA26
type: Strain

V5VA69-citation-29437920
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

AC1633
type: Strain

V5VA69-citation-SIPE19DF8BFEC287AE8
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

ABBL127
type: Strain

NFAb1
type: Strain

MDR-CQB
type: Strain

V5VA69-citation-SIP92AD68B446AD8B1E
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-29137647
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

V5VA69-citation-SIP2B6D7DFE44D76436
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

WCHAB005078
type: Strain

AB5075-UW
type: Strain

4300STDY7045845
type: Strain

V5VA69-citation-SIPDC19F3FC6B4EB345
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

V5VA69-citation-SIPD350E7AC1110B38B
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP7186207ED95BB6A8
date: 2017-05
author: Ruprecht R.M.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Song R.
author: Chenine A.L.

V5VA69-citation-SIP4C3A055A24CED0C9
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

MDR-CQD
type: Strain

PS01096
comment: PPIC_PPIASE_1
database: PROSITE
signature sequence match: PROSITE PS01096 match 1
type: Resource

SIP95EAD43B7DE294E8
type: Submission Citation
author: Rakovitsky N.
submitted to: EMBL/GenBank/DDBJ
author: Frenk S.
date: 2020-12
title: Epidemiology and genetic characterization of 247 CRAB isolated from infections.

R2091
type: Strain

MRSN14237
type: Strain

R10
type: Strain

A217
type: Strain

AM107
type: Strain

AB048
type: Strain

V5VA69-citation-25845845
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

Ac576
type: Strain

SAA14
type: Strain

SIP894968993DD7C68A
date: 2018-07
group: Pathogen Informatics
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

ATCC BAA-1790
type: Strain

SIP6A8CF85D691AF963
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
title: Genome analysis of an Acinetobacter baumannii outbreak in hospital ICU in China.
author: Liu X.
date: 2017-10

V5VA69-citation-SIPC6E8B3E6BC67C0E3
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP475028200FF8DF7D
full name: Post translocation chaperone PrsA2
type: Structured Name

TG22168
type: Strain

16533
type: Strain

4300STDY7045823
type: Strain

E314
type: Strain

SP816
type: Strain

V5VA69-citation-SIPD5955B8709335A8B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

MRSN15313
type: Strain

AF-673
type: Strain

NCTC13421
type: Strain

ATCC 17978
type: Strain

DMS06669
type: Strain

V5VA69-citation-SIPD20CB73EDCC25D56
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

AB047
type: Strain

XH859
type: Strain

MDR-CQI
type: Strain

Res13-Abat-PEA21-P4-01-A
type: Strain

ABNIH28
type: Strain

XH731
type: Strain

KPC-SM-17a
type: Strain

SIP485F63CF5E859285
submitted to: EMBL/GenBank/DDBJ
author: Schmid M.
author: Ahrens C.H.
date: 2016-02
author: Frey J.
author: Zbinden R.
author: Gekenidis M.-T.
type: Submission Citation
author: Remus-Emsermann M.N.P.
author: Pelludat C.
title: The full genome sequence of Pseudomonas citronellolis P3B5, an alkane degrading bacterium with considerable biochemical interest isolated from basil leaves.

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

A0A127MPD2
annotation: SIPA80A8B20B0B8FE1A
annotation: SIP8FF2F8DBB40C987C
classified with: http://purl.uniprot.org/keywords/521
classified with: GO_0016491
citation: SIPA2F21D3F08F5FB3
annotation: SIP102B6B674C77FFBC
recommended name: SIPE35C86356FCD314F
organism: http://purl.uniprot.org/taxonomy/53408
sequence: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
annotation: SIP0ED7EBDB99911018
classified with: http://purl.uniprot.org/keywords/288
version: 23
classified with: http://purl.uniprot.org/keywords/560
annotation: SIPCEEF534B9EF28DC6
reviewed: false
enzyme: http://purl.uniprot.org/enzyme/1.-.-.-
classified with: http://purl.uniprot.org/keywords/520
modified: 2022-08-03
existence: Inferred from Homology Existence
created: 2016-05-11
proteome: Chromosome
type: Protein
annotation: SIP2F8054E6A1C7F380
citation: SIP485F63CF5E859285
annotation: SIP19EA997A76A829F2
mnemonic: A0A127MPD2_9PSED

cd02135
type: Resource
database: CDD
signature sequence match: CDD cd02135 match 1
comment: YdjA-like

MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: Simple Sequence
modified: 2016-05-11
version: 1
mass: 20095

-9218582394720417746tt163
type: ExactPosition
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
position: 163
type: Position

SIP99065DA208A6FEA2
subclass of: CHEBI_58210
comment: ligand shared between dimeric partners

ydjA
type: Gene
orf name: A9C11_08135
orf name: PcP3B5_16410

-9218582394720417746tt12
type: Position
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: ExactPosition
position: 12

-9218582394720417746tt10
type: Position
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
position: 10
type: ExactPosition

IPR000415
type: Resource
database: InterPro
comment: Nitroreductase-like

PIRSF000232
type: Resource
database: PIRSF
signature sequence match: PIRSF PIRSF000232 match 1
comment: YdjA

-9218582394720417746tt18
type: Position
position: 18
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: ExactPosition

SSF55469
database: SUPFAM
comment: SSF55469
type: Resource
signature sequence match: SUPFAM SSF55469 match 1

SIPE35C86356FCD314F
full name: Putative NAD(P)H nitroreductase
type: Structured Name
ec name: 1.-.-.-

SIPA2F21D3F08F5FB3
type: Submission Citation
title: Genome Sequence of Pseudomonas citronellolis Strain SJTE-3, an Estrogens and Persistent Organic Pollutants degradation strain.
date: 2016-05
submitted to: EMBL/GenBank/DDBJ
author: Liang R.

-9218582394720417746tt35
type: Position
type: ExactPosition
position: 35
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG

IPR026021
comment: YdjA-like
database: InterPro
type: Resource

PF00881
database: Pfam
signature sequence match: Pfam PF00881 match 1
type: Resource
comment: Nitroreductase

SIPA80A8B20B0B8FE1A
type: Similarity Annotation
comment: Belongs to the nitroreductase family.

SIPCEEF534B9EF28DC6
range: -9218582394720417746tt18tt163
type: Domain Extent Annotation
comment: Nitroreductase

P3B5
type: Strain

A0A127MPD2-citation-SIPA2F21D3F08F5FB3
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218582394720417746tt39
type: ExactPosition
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: Position
position: 39

SIP19EA997A76A829F2
comment: Binds 1 FMN per subunit.
cofactor: CHEBI_58210
type: Cofactor Annotation

IPR029479
type: Resource
comment: Nitroreductase
database: InterPro

-9218582394720417746tt133
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: Position
type: ExactPosition
position: 133

-9218582394720417746tt135
reference: MEAYEALVNRVSHARLGEPAPTAGQLERLFRVALRAPDHGQLRPWRFLTVEGEARQQLGELFARALNAEQPDASPEALAKARAMPLRAPTLVVAIARLQEHPKVPEIEQMLAAGCAAYGIVQAAFVEGLGAMWRTGAMAFDPVVHQGLGLAANERIVGFIYLGTPMGELRQPAPLDPAAFVSAWRG
type: Position
position: 135
type: ExactPosition

SJTE-3
type: Strain

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIP8AE55CA7E16F2770
type: Domain Extent Annotation
comment: Tr-type G
range: -9218573245799594962tt25tt239

TIGR00231
type: Resource
signature sequence match: TIGRFAMs TIGR00231 match 1
database: TIGRFAMs
comment: small_GTP

PS51722
database: PROSITE
type: Resource
signature sequence match: PROSITE PS51722 match 1
comment: G_TR_2

IPR011779
type: Resource
database: InterPro
comment: SO4_adenylTrfase_lsu

A0A379W381
annotation: SIP0700A618FD5F1931
classified with: http://purl.uniprot.org/keywords/342
classified with: GO_0004781
annotation: SIPB2917E90B92BB842
modified: 2022-08-03
citation: http://purl.uniprot.org/citations/30286803
alternative name: SIPC67CD04DD2ADACFA
citation: SIPF1DB69A1DEB4A0F2
classified with: GO_0003924
classified with: GO_0070814
classified with: http://purl.uniprot.org/keywords/548
enzyme: http://purl.uniprot.org/enzyme/2.7.7.4
citation: SIP3ECEE97C04D4F6EF
existence: Inferred from Homology Existence
organism: http://purl.uniprot.org/taxonomy/59201
annotation: SIPDA7A1C6B7E31AD79
type: Protein
annotation: SIP8AE55CA7E16F2770
annotation: SIP06CE93DC6EC56F89
alternative name: SIP73256915A3BE5AFD
classified with: http://purl.uniprot.org/keywords/67
classified with: GO_0005524
annotation: SIPFC9A9DA6CE0EA8D6
annotation: SIP7424982DD74F083D
classified with: GO_0000103
mnemonic: A0A379W381_SALET
classified with: GO_0005525
created: 2018-11-07
sequence: A0A379W381-1
recommended name: SIP1F0521ECCDF0AD8A
version: 23
proteome: Unassembled WGS sequence
citation: SIPD2E413730CF96E32
annotation: SIPB9C504219A3B1D5A
citation: SIPA5FB095315502327
reviewed: false
annotation: SIPEBCF95CF404257EA

808797
type: Strain

A0A379W381-1
modified: 2018-11-07
type: Simple Sequence
value: MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPMEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
mass: 53166
version: 1

SSF50465
database: SUPFAM
signature sequence match: SUPFAM SSF50465 match 1
type: Resource
comment: SSF50465

cysN
orf name: AXT19_21340
orf name: NCTC8258_01464
orf name: G2988_10875
orf name: FZ516_22725
type: Gene
orf name: G0D53_12435
orf name: F9W02_12510
orf name: DOW74_18935

-9218573245799594962tt25
type: ExactPosition
type: Position
position: 25
reference: A0A379W381-1

-9218573245799594962tt41
type: ExactPosition
reference: A0A379W381-1
position: 41
type: Position

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SSF50447
database: SUPFAM
comment: SSF50447
signature sequence match: SUPFAM SSF50447 match 1
type: Resource

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218573245799594962tt34
type: ExactPosition
position: 34
reference: A0A379W381-1
type: Position

A0A379W381-citation-30286803
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

-9218573245799594962tt168
reference: A0A379W381-1
type: ExactPosition
position: 168
type: Position

795087
type: Strain

cd04166
comment: CysN_ATPS
type: Resource
database: CDD
signature sequence match: CDD cd04166 match 1

SIP3ECEE97C04D4F6EF
author: Nair S.
author: De Pinna E.
type: Submission Citation
author: Dallman T.
author: Grant K.
date: 2019-10
submitted to: EMBL/GenBank/DDBJ
author: Ashton P.M.
author: Peters T.

IPR031157
database: InterPro
comment: G_TR_CS
type: Resource

IPR000795
database: InterPro
comment: T_Tr_GTP-bd_dom
type: Resource

cd03695
type: Resource
comment: CysN_NodQ_II
database: CDD
signature sequence match: CDD cd03695 match 1

IPR009001
database: InterPro
comment: Transl_elong_EF1A/Init_IF2_C
type: Resource

IPR009000
database: InterPro
comment: Transl_B-barrel_sf
type: Resource

SIP73256915A3BE5AFD
full name: Sulfate adenylate transferase
type: Structured Name
short name: SAT

SIPC67CD04DD2ADACFA
full name: ATP-sulfurylase large subunit
type: Structured Name

cd04095
database: CDD
comment: CysN_NoDQ_III
signature sequence match: CDD cd04095 match 1
type: Resource

-9218573245799594962tt171
position: 171
reference: A0A379W381-1
type: ExactPosition
type: Position

Salmonella enterica
type: Strain

SIP1F0521ECCDF0AD8A
ec name: 2.7.7.4
full name: Sulfate adenylyltransferase subunit 1
type: Structured Name

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

IPR005225
database: InterPro
comment: Small_GTP-bd_dom
type: Resource

-9218573245799594962tt113
type: ExactPosition
reference: A0A379W381-1
position: 113
type: Position

-9218573245799594962tt239
type: ExactPosition
reference: A0A379W381-1
position: 239
type: Position

TIGR02034
comment: CysN
type: Resource
database: TIGRFAMs
signature sequence match: TIGRFAMs TIGR02034 match 1

-9218573245799594962tt117
type: ExactPosition
reference: A0A379W381-1
position: 117
type: Position

12-4579
type: Strain

CFSAN032048
type: Strain

PS00301
database: PROSITE
signature sequence match: PROSITE PS00301 match 1
comment: G_TR_1
type: Resource

PR00315
type: Resource
database: PRINTS
comment: ELONGATNFCT

IPR044138
comment: CysN_II
database: InterPro
type: Resource

PF00009
database: Pfam
type: Resource
signature sequence match: Pfam PF00009 match 1
comment: GTP_EFTU

SIPEBCF95CF404257EA
type: Similarity Annotation
comment: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.

NCTC8258
type: Strain

IPR041757
type: Resource
database: InterPro
comment: CysN_GTP-bd

424645
type: Strain

MF_00062
comment: Sulf_adenylyltr_sub1
database: HAMAP
type: Resource
signature sequence match: HAMAP MF 00062 match 1

SIP06CE93DC6EC56F89
comment: With CysD forms the ATP sulfurylase (ATPS) that catalyzes the adenylation of sulfate producing adenosine 5'-phosphosulfate (APS) and diphosphate, the first enzymatic step in sulfur assimilation pathway. APS synthesis involves the formation of a high-energy phosphoric-sulfuric acid anhydride bond driven by GTP hydrolysis by CysN coupled to ATP hydrolysis by CysD.
type: Function Annotation

IPR044139
database: InterPro
comment: CysN_NoDQ_III
type: Resource

SIP7424982DD74F083D
comment: Heterodimer composed of CysD, the smaller subunit, and CysN.
type: Subunit Annotation

A0A3S4J2J1
citation: SIP6CCAE3AF3DD9696B
annotation: SIP4F502730D92CBD9A
mnemonic: A0A3S4J2J1_SALET
citation: SIPD622B3134EFF08E5
existence: Predicted Existence
classified with: GO_0051536
organism: http://purl.uniprot.org/taxonomy/59201
citation: SIPE8A35A9754152CA1
submitted name: SIPD09A51D27B85D4D4
created: 2019-07-31
reviewed: false
proteome: Unassembled WGS sequence
citation: SIP946BB324CAA753B7
citation: SIPA8B4643EC70DF60B
citation: SIPECD4C3A8F3797B60
classified with: http://purl.uniprot.org/keywords/560
classified with: http://purl.uniprot.org/keywords/520
type: Protein
classified with: GO_0004159
citation: SIP9AD53E7D6A471F38
proteome: Chromosome
proteome: Chromosome 1
citation: http://purl.uniprot.org/citations/30286803
version: 18
submitted name: SIP3488D32B77F56BFE
annotation: SIP14DD3FD75F220302
submitted name: SIP7F6D2CCB1020F3E0
modified: 2022-08-03
submitted name: SIPAA968DF383AD791A
enzyme: http://purl.uniprot.org/enzyme/1.3.1.1
sequence: A0A3S4J2J1-1

SIP946BB324CAA753B7
author: Peters T.
date: 2018-09
author: Grant K.
author: Dallman T.
submitted to: EMBL/GenBank/DDBJ
author: Nair S.
author: De Pinna E.
type: Submission Citation
author: Ashton P.M.

PF07992
database: Pfam
comment: Pyr_redox_2
signature sequence match: Pfam PF07992 match 1
type: Resource

preT
orf name: G1H27_10995
orf name: GBS28_09945
orf name: DO679_05140
orf name: NCTC8271_02167
orf name: G1H45_10935
orf name: RU46_13675
orf name: G1H43_11315
orf name: G1I14_09560
orf name: G1H28_10935
orf name: G1I21_11380
orf name: G1F01_12800
orf name: G3A19_13160
orf name: AXR82_11130
orf name: G1H72_11000
orf name: G1H84_10095
orf name: FE718_07195
orf name: GB511_11095
orf name: G1I15_10990
orf name: DKT21_08660
orf name: G0D64_13280
orf name: GBW33_12565
orf name: G1E63_11785
orf name: GB577_10045
orf name: G1G81_09980
orf name: FE738_08395
orf name: LH82_10570
orf name: EUC09_07000
orf name: CQE41_07465
orf name: F9X98_08345
orf name: G1F04_11000
orf name: EWC36_07060
orf name: GBX88_14245
orf name: GBX94_07085
orf name: EZX96_04950
orf name: ACV85_12635
orf name: G1I36_10995
orf name: G1G78_10695
orf name: GBY50_05710
orf name: G1F03_11315
orf name: G1H37_10270
orf name: G1G87_12885
orf name: GB132_13915
orf name: G1G88_10890
orf name: GBY09_03485
orf name: G1H78_07845
orf name: F3E63_04795
orf name: GB579_10370
orf name: GB396_09985
orf name: G1E69_10920
orf name: G1H65_11315
orf name: G3A03_10170
orf name: G3A20_16825
orf name: G1H44_11010
orf name: GB490_07020
orf name: GDM15_19450
orf name: GB151_14215
orf name: DTU87_03580
orf name: GBZ81_10015
orf name: GB524_11185
orf name: G1I16_11320
orf name: JG558_08155
orf name: A5895_24935
type: Gene
orf name: GBZ99_07935
orf name: F9Q85_05445
orf name: G2985_13640
orf name: G1E65_11005
orf name: GB054_05740
orf name: G2927_06130
orf name: DK093_05415
orf name: GBS06_11025
orf name: G1G63_11255
orf name: G1G68_10520
orf name: G1F11_10150
orf name: XE93_07880
orf name: G1H73_11165
orf name: G1H67_11580
orf name: FQS30_10545
orf name: EHB73_15530

SIP4F502730D92CBD9A
range: -9218571344002251730tt7tt112
type: Domain Extent Annotation
comment: Fer4_20

302612
type: Strain

294733
type: Strain

CFSAN025702
type: Strain

474895
type: Strain

PF14691
signature sequence match: Pfam PF14691 match 1
database: Pfam
comment: Fer4_20
type: Resource

672544
type: Strain

4
type: Strain

A0A3S4J2J1-citation-30286803
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIPA8B4643EC70DF60B
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
date: 2018-06
group: GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback

600707
type: Strain

Salmonella enterica
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP14DD3FD75F220302
range: -9218571344002251730tt126tt395
comment: Pyr_redox_2
type: Domain Extent Annotation

779353
type: Strain

808851
type: Strain

IPR028261
type: Resource
database: InterPro
comment: DPD_II

-9218571344002251730tt7
position: 7
reference: A0A3S4J2J1-1
type: ExactPosition
type: Position

683617
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

Salmonella enterica subsp. enterica
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIPAA968DF383AD791A
ec name: 1.3.1.1
type: Structured Name
full name: Oxidoreductase

WAPHL_SAL-A00546
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIPE8A35A9754152CA1
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
date: 2016-11
title: genome sequence of LSP 389/97, an isolate of the Spanish clone of Salmonella enterica 4,5,12,i:-.
author: Rodicio M.R.

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

IPR009051
comment: Helical_ferredxn
database: InterPro
type: Resource

531312
type: Strain

193386
type: Strain

814328
type: Strain

-9218571344002251730tt395
type: Position
type: ExactPosition
reference: A0A3S4J2J1-1
position: 395

741672
type: Strain

-9218571344002251730tt126
reference: A0A3S4J2J1-1
type: Position
type: ExactPosition
position: 126

-9218571344002251730tt112
reference: A0A3S4J2J1-1
type: Position
type: ExactPosition
position: 112

A0A3S4J2J1-1
modified: 2019-07-31
mass: 44537
version: 1
value: MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCEVGGSLSLAQLKAEYRAVLMTVGMSCGSGLPLFEQASHVEIAVDFLQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAAQAIHHYLEEACSC
type: Simple Sequence

CFSAN031911
type: Strain

NCTC8271
type: Strain

CFSAN030084
type: Strain

741040
type: Strain

IPR023753
comment: FAD/NAD-binding_dom
type: Resource
database: InterPro

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIP3488D32B77F56BFE
full name: Dihydropyrimidine dehydrogenase
type: Structured Name

SIP6CCAE3AF3DD9696B
date: 2021-01
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
title: Keeping alert to hypervirulent salmonella strains isolated from avain.
author: Ma J.
author: Yao H.
author: Pan X.

LSP 389/97
type: Strain

IPR036188
comment: FAD/NAD-bd_sf
database: InterPro
type: Resource

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

638103
type: Strain

492489
type: Strain

Se32
type: Strain

802714
type: Strain

SIP7F6D2CCB1020F3E0
type: Structured Name
full name: NAD-dependent dihydropyrimidine dehydrogenase subunit PreT

CFSAN002017
type: Strain

SIPD09A51D27B85D4D4
full name: NAD(P)-dependent oxidoreductase
type: Structured Name

261456
type: Strain

13-0166
type: Strain

-9218563454172589010tt64
type: Position
position: 64
reference: A0A5F1IZD5-1
type: ExactPosition

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218563454172589010tt419
position: 419
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1

-9218563454172589010tt322
type: Position
position: 322
type: ExactPosition
reference: A0A5F1IZD5-1

-9218563454172589010tt561
type: Position
position: 561
type: ExactPosition
reference: A0A5F1IZD5-1

IPR029039
database: InterPro
type: Resource
comment: Flavoprotein-like_sf

A0A5F1IZD5
annotation: SIP8459EF0FAFD18FE3
classified with: GO_0010181
reviewed: false
annotation: SIPE388B978BB5858C4
annotation: SIP98D534DBADF6CF74
existence: Inferred from Homology Existence
sequence: A0A5F1IZD5-1
annotation: SIP92F80E75D9C01B7E
annotation: SIP90775BA45AFE01E5
citation: SIP89F2DAFDD828F299
annotation: SIPF50C39FF5F6459F5
classified with: http://purl.uniprot.org/keywords/249
annotation: SIP14350666EBA2CA80
classified with: http://purl.uniprot.org/keywords/274
proteome: Unassembled WGS sequence
annotation: SIP66327D92ED18CA72
annotation: SIP68362AF9A0542393
annotation: SIP265BF1DF3438662A
type: Protein
classified with: GO_0050660
annotation: SIP50F91DFC0393D27B
annotation: SIPF7776A8BFED05064
annotation: SIP6B337AE690F27F0E
classified with: GO_0004783
classified with: http://purl.uniprot.org/keywords/521
annotation: SIP11163ADD5325575C
annotation: SIP7550A3188A8418BB
classified with: http://purl.uniprot.org/keywords/288
classified with: http://purl.uniprot.org/keywords/560
enzyme: http://purl.uniprot.org/enzyme/1.8.1.2
annotation: SIPFF65ACBB18A31F94
annotation: SIP8FF25C8612BE7B27
annotation: SIP5953D4541BE2E91B
mnemonic: A0A5F1IZD5_9ESCH
annotation: SIP56699FF78398A2A0
classified with: GO_0070814
classified with: GO_0000103
annotation: SIPFD50AD22AB5DBB21
annotation: SIP35804A0C75E36C95
organism: http://purl.uniprot.org/taxonomy/2041645
recommended name: SIPE0D2033885A271F5
classified with: http://purl.uniprot.org/keywords/198
annotation: SIP0050A37636189A63
created: 2019-11-13
annotation: SIP74BB77D4F1557E72
version: 10
citation: SIPC1CF7006ABED859D
modified: 2022-08-03
classified with: GO_0019344
annotation: SIPB9104316641719F0
annotation: SIP97917205AD4AB458

-9218563454172589010tt153
type: ExactPosition
type: Position
position: 153
reference: A0A5F1IZD5-1

-9218563454172589010tt202
type: Position
type: ExactPosition
position: 202
reference: A0A5F1IZD5-1

IPR017938
comment: Riboflavin_synthase-like_b-brl
type: Resource
database: InterPro

-9218563454172589010tt448
type: Position
position: 448
type: ExactPosition
reference: A0A5F1IZD5-1

-9218563454172589010tt75
type: Position
reference: A0A5F1IZD5-1
position: 75
type: ExactPosition

-9218563454172589010tt70
type: Position
reference: A0A5F1IZD5-1
type: ExactPosition
position: 70

cysJ
type: Gene
orf name: FEK66_13410
orf name: CQJ27_14810

-9218563454172589010tt389
type: ExactPosition
position: 389
type: Position
reference: A0A5F1IZD5-1

-9218563454172589010tt386
type: ExactPosition
position: 386
type: Position
reference: A0A5F1IZD5-1

SSF52343
type: Resource
signature sequence match: SUPFAM SSF52343 match 1
database: SUPFAM
comment: SSF52343

PR00371
type: Resource
comment: FPNCR
database: PRINTS

SIP66327D92ED18CA72
comment: In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
type: Similarity Annotation

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR008254
type: Resource
database: InterPro
comment: Flavodoxin/NO_synth

-9218563454172589010tt356
position: 356
type: ExactPosition
type: Position
reference: A0A5F1IZD5-1

SSF52218
type: Resource
database: SUPFAM
comment: SSF52218
signature sequence match: SUPFAM SSF52218 match 1

-9218563454172589010tt599
position: 599
type: ExactPosition
type: Position
reference: A0A5F1IZD5-1

MF_01541
comment: CysJ
type: Resource
signature sequence match: HAMAP MF 01541 match 1
database: HAMAP

-9218563454172589010tt162
type: ExactPosition
position: 162
type: Position
reference: A0A5F1IZD5-1

SIP68362AF9A0542393
comment: Alpha(8)-beta(8). The alpha component is a flavoprotein, the beta component is a hemoprotein.
type: Subunit Annotation

IPR001709
database: InterPro
type: Resource
comment: Flavoprot_Pyr_Nucl_cyt_Rdtase

A0A5F1IZD5-1
value: MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPATLAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAVKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSHSVATGALNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRTRAGGASSFLAERVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKDGVLTRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
mass: 66391
modified: 2019-11-13
version: 1
type: Simple Sequence

SIP92F80E75D9C01B7E
type: Domain Extent Annotation
comment: FAD-binding FR-type
range: -9218563454172589010tt234tt448

-9218563454172589010tt520
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1
position: 520

-9218563454172589010tt117
type: ExactPosition
type: Position
position: 117
reference: A0A5F1IZD5-1

SIPC1CF7006ABED859D
author: Lau S.C.K.
author: Shen Z.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
date: 2017-10
title: Genetic diversity of 'environment-specific' Escherichia coli strains: expanding the understanding of the ecology and evolution of the model bacterial species.

-9218563454172589010tt234
type: ExactPosition
type: Position
position: 234
reference: A0A5F1IZD5-1

SSF63380
comment: SSF63380
database: SUPFAM
type: Resource
signature sequence match: SUPFAM SSF63380 match 1

-9218563454172589010tt529
type: Position
position: 529
type: ExactPosition
reference: A0A5F1IZD5-1

-9218563454172589010tt406
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1
position: 406

-9218563454172589010tt404
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1
position: 404

-9218563454172589010tt525
type: Position
position: 525
type: ExactPosition
reference: A0A5F1IZD5-1

E1130
type: Strain

SIP89F2DAFDD828F299
author: Lun C.
author: Koh X.P.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
date: 2019-04
title: Escherichia hongkongenesis sp. nov., isolated from subtropical aquatic environment.
author: Woo C.F.
author: Yu Y.
author: Lau S.
author: Shen Z.

-9218563454172589010tt519
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1
position: 519

SIPFF65ACBB18A31F94
cofactor: CHEBI_58210
comment: Binds 1 FMN per subunit.
type: Cofactor Annotation

IPR003097
type: Resource
database: InterPro
comment: CysJ-like_FAD-binding

PF00667
signature sequence match: Pfam PF00667 match 1
type: Resource
comment: FAD_binding_1
database: Pfam

IPR010199
comment: CysJ
type: Resource
database: InterPro

-9218563454172589010tt422
type: Position
type: ExactPosition
reference: A0A5F1IZD5-1
position: 422

PF00258
comment: Flavodoxin_1
signature sequence match: Pfam PF00258 match 1
database: Pfam
type: Resource

-9218563454172589010tt410
type: Position
type: ExactPosition
position: 410
reference: A0A5F1IZD5-1

IPR001094
comment: Flavdoxin-like
database: InterPro
type: Resource

PF00175
signature sequence match: Pfam PF00175 match 1
database: Pfam
type: Resource
comment: NAD_binding_1

-9218563454172589010tt120
type: ExactPosition
type: Position
position: 120
reference: A0A5F1IZD5-1

SIPE0D2033885A271F5
short name: SiR-FP
type: Structured Name
full name: Sulfite reductase [NADPH] flavoprotein alpha-component
ec name: 1.8.1.2

PS51384
signature sequence match: PROSITE PS51384 match 1
type: Resource
database: PROSITE
comment: FAD_FR

IPR039261
type: Resource
database: InterPro
comment: FNR_nucleotide-bd

TIGR01931
database: TIGRFAMs
comment: cysJ
signature sequence match: TIGRFAMs TIGR01931 match 1
type: Resource

SIP98D534DBADF6CF74
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

IPR017927
comment: FAD-bd_FR_type
type: Resource
database: InterPro

PS50902
signature sequence match: PROSITE PS50902 match 1
type: Resource
database: PROSITE
comment: FLAVODOXIN_LIKE

IPR001433
comment: OxRdtase_FAD/NAD-bd
type: Resource
database: InterPro

SIPF50C39FF5F6459F5
type: Cofactor Annotation
comment: Binds 1 FAD per subunit.
cofactor: CHEBI_57692

SIP56699FF78398A2A0
range: -9218563454172589010tt64tt202
comment: Flavodoxin-like
type: Domain Extent Annotation

PR00369
type: Resource
database: PRINTS
comment: FLAVODOXIN

IPR029758
type: Resource
database: InterPro
comment: CysJ_Proteobact

SIP50F91DFC0393D27B
type: Similarity Annotation
comment: In the N-terminal section; belongs to the flavodoxin family.

PIRSF000207
comment: SiR-FP_CysJ
signature sequence match: PIRSF PIRSF000207 match 1
database: PIRSF
type: Resource

IPR023173
database: InterPro
type: Resource
comment: NADPH_Cyt_P450_Rdtase_alpha

SIP6B337AE690F27F0E
type: Function Annotation
comment: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component.

SIPFD50AD22AB5DBB21
comment: Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family.
type: Similarity Annotation

SIP388103896B323FF3
author: Carlson H.K.
submitted to: EMBL/GenBank/DDBJ
author: Cheng Y.
author: Barnum T.P.
author: Lucas L.N.
title: The pathways for chlorine oxyanion respiration interact through the shared metabolite chlorate.
type: Submission Citation
date: 2019-07
author: Coates J.D.
author: Hill K.A.

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

PF02629
database: Pfam
signature sequence match: Pfam PF02629 match 1
type: Resource
comment: CoA_binding

SIP4BF867B51931E78F
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Stepanov V.G.
author: Fox G.E.
date: 2017-06
author: Roberts D.J.
title: Draft genome sequence of the halophilic bacterium Marinobacter vinifirmus FB1.

A0A259W0L0
proteome: Unassembled WGS sequence
annotation: SIP74E469CA30740F82
sequence: A0A259W0L0-1
existence: Inferred from Homology Existence
annotation: SIPF4D229F5BA653A01
classified with: http://purl.uniprot.org/keywords/816
annotation: SIP3AF3AF2B401BCDED
annotation: SIP508FB03CD9B82C99
annotation: SIPFAFE9F67EACC6CCD
classified with: GO_0000166
version: 19
annotation: SIPD98755AE686FA108
modified: 2022-08-03
citation: SIP4BF867B51931E78F
classified with: http://purl.uniprot.org/keywords/547
annotation: SIPE7B44E00329588DA
created: 2017-12-20
classified with: http://purl.uniprot.org/keywords/436
recommended name: SIP4CB65A323373D987
annotation: SIP0E545000037BA61B
type: Protein
classified with: GO_0004775
citation: SIP388103896B323FF3
reviewed: false
classified with: GO_0006099
mnemonic: A0A259W0L0_9GAMM
annotation: SIP4536D72CF7728458
annotation: SIP9238ED4FE7B941AB
enzyme: http://purl.uniprot.org/enzyme/6.2.1.5
organism: http://purl.uniprot.org/taxonomy/355591
alternative name: SIP4C4F921D82B5B842
annotation: SIP0D4E4BE5DC4DCB5C
annotation: SIP7A2B9A0F6CF3772B

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218577781287878610tt98
type: Position
type: ExactPosition
reference: A0A259W0L0-1
position: 98

SIP4C4F921D82B5B842
type: Structured Name
full name: Succinyl-CoA synthetase subunit alpha
short name: SCS-alpha

-9218577781287878610tt96
type: Position
position: 96
type: ExactPosition
reference: A0A259W0L0-1

PS01216
database: PROSITE
comment: SUCCINYL_COA_LIG_1
signature sequence match: PROSITE PS01216 match 1
type: Resource

-9218577781287878610tt17
type: ExactPosition
reference: A0A259W0L0-1
position: 17
type: Position

SM00881
signature sequence match: SMART SM00881 match 1
comment: CoA_binding
type: Resource
database: SMART

IPR017440
comment: Cit_synth/succinyl-CoA_lig_AS
database: InterPro
type: Resource

-9218577781287878610tt247
reference: A0A259W0L0-1
type: Position
type: ExactPosition
position: 247

SIPE7B44E00329588DA
comment: CoA_binding
type: Domain Extent Annotation
range: -9218577781287878610tt4tt100

-9218577781287878610tt159
type: ExactPosition
reference: A0A259W0L0-1
type: Position
position: 159

-9218577781287878610tt20
type: ExactPosition
position: 20
type: Position
reference: A0A259W0L0-1

PS00399
type: Resource
comment: SUCCINYL_COA_LIG_2
database: PROSITE
signature sequence match: PROSITE PS00399 match 1

MF_01988
comment: Succ_CoA_alpha
signature sequence match: HAMAP MF 01988 match 1
database: HAMAP
type: Resource

PF00549
comment: Ligase_CoA
signature sequence match: Pfam PF00549 match 1
database: Pfam
type: Resource

SIPD98755AE686FA108
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

-9218577781287878610tt43
position: 43
type: ExactPosition
type: Position
reference: A0A259W0L0-1

-9218577781287878610tt4
position: 4
type: ExactPosition
type: Position
reference: A0A259W0L0-1

TIGR01019
signature sequence match: TIGRFAMs TIGR01019 match 1
comment: sucCoAalpha
database: TIGRFAMs
type: Resource

SIP4CB65A323373D987
type: Structured Name
ec name: 6.2.1.5
full name: Succinate--CoA ligase [ADP-forming] subunit alpha

SSF52210
type: Resource
database: SUPFAM
signature sequence match: SUPFAM SSF52210 match 1
comment: SSF52210

SIP9238ED4FE7B941AB
type: Region Annotation
range: -9218577781287878610tt96tt98
comment: Coenzyme A binding

A0A259W0L0-1
version: 1
type: Simple Sequence
value: MSILINKDTKVICQGFTGAQGTFHSEQAIAYGTKMVGGVSPGKGGTEHLGLPVFNTVRDAVEKTGAEATVIYVPAPFCKDAIIEAADAGIKLIVCITEGIPTIDMLYAKEYVDRAGVRMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCIGIGGDPIPGSNFIDILALLQEDPETEAIVMIGEIGGTAEEEAAAFIKENVTKPVVSYIAGVTAPPGKRMGHAGAIISGGKGTADEKFAALEDAGVKTVRSLAEIGKALKEVTGW
mass: 30136
modified: 2017-12-20

IPR005810
comment: CoA_lig_alpha
type: Resource
database: InterPro

-9218577781287878610tt100
reference: A0A259W0L0-1
type: ExactPosition
type: Position
position: 100

SIPFAFE9F67EACC6CCD
comment: Heterotetramer of two alpha and two beta subunits.
type: Subunit Annotation

SIP3AF3AF2B401BCDED
type: Function Annotation
comment: Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.

SIP0E545000037BA61B
type: Active Site Annotation
range: -9218577781287878610tt247tt247
comment: Tele-phosphohistidine intermediate

IPR016102
comment: Succinyl-CoA_synth-like
database: InterPro
type: Resource

FB1
type: Strain

IPR003781
type: Resource
comment: CoA-bd
database: InterPro

PIRSF001553
database: PIRSF
signature sequence match: PIRSF PIRSF001553 match 1
comment: SucCS_alpha
type: Resource

sucD
orf name: B9Q17_17760
orf name: FHK81_04825
type: Gene

SIP4536D72CF7728458
type: Similarity Annotation
comment: Belongs to the succinate/malate CoA ligase alpha subunit family.

UCB
type: Strain

SIP7A2B9A0F6CF3772B
type: Region Annotation
range: -9218577781287878610tt17tt20
comment: Coenzyme A binding

IPR033847
type: Resource
database: InterPro
comment: Citrt_syn/SCS-alpha_CS

SIPD767879E054EEAA9
subclass of: substrate
comment: ligand shared with subunit beta

IPR005811
comment: CoA_ligase
type: Resource
database: InterPro

IPR017871
type: Resource
database: InterPro
comment: ABC_transporter-like_CS

SIP25E0053E856ECBAC
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

A0A370S4X7
classified with: GO_0005524
existence: Predicted Existence
created: 2018-11-07
proteome: Unassembled WGS sequence
classified with: http://purl.uniprot.org/keywords/813
modified: 2022-08-03
type: Protein
citation: SIPAA63A142B88EA4A3
submitted name: SIP58DE2F464E026125
mnemonic: A0A370S4X7_SERFO
annotation: SIP4BA61BE822736878
version: 12
submitted name: SIPD5168519564EA731
annotation: SIP25E0053E856ECBAC
annotation: SIP48BCDE231CF2E439
reviewed: false
organism: http://purl.uniprot.org/taxonomy/47917
classified with: http://purl.uniprot.org/keywords/67
sequence: A0A370S4X7-1
classified with: GO_0043190
classified with: GO_0022857
citation: SIPFD8DB518DC9B7106

-9218573284721157074tt235
type: Position
type: ExactPosition
reference: A0A370S4X7-1
position: 235

PF00005
type: Resource
signature sequence match: Pfam PF00005 match 1
comment: ABC_tran
database: Pfam
signature sequence match: Pfam PF00005 match 2

-9218573284721157074tt37
reference: A0A370S4X7-1
type: ExactPosition
type: Position
position: 37

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SIP4BA61BE822736878
comment: ABC transporter
type: Domain Extent Annotation
range: -9218573284721157074tt5tt235

SIPFD8DB518DC9B7106
title: Food and environmental bacterial isolates.
author: Duvenage S.
date: 2020-07
type: Submission Citation
author: Du Plessis E.M.
submitted to: EMBL/GenBank/DDBJ
author: Korsten L.
author: Richter L.
author: Allam M.

IPR003439
database: InterPro
comment: ABC_transporter-like_ATP-bd
type: Resource

http://purl.uniprot.org/uniprot/A0A370S4X7#gene-MD5DCB88EF319BBE2008CD142724C517315
orf name: DFO62_12710
type: Gene
orf name: HZI44_04085

E2309
type: Strain

A0A370S4X7-1
version: 1
type: Simple Sequence
mass: 37890
value: MTIAVQFIDVSRIFGDVRAVDRVSVEIQDGEFFSMLGPSGSGKTTCLRLIAGFEQLSSGSIRIHGQEASNLPPYQRDVNTVFQDYALFPHMSVLENVAYGLMVKGVAKRERLARANQALESVALGFAAERKPAHLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQGELKKLQRQLGITFIFVTHDQSEALSMSDRVAVFNNGRIEQVDAPRELYMRPRTPFVAEFVGTSNVVRSELAERLLGQSATFSIRPEHIRLLDQGGATQGEVQVQGTLQDIHYQGAATRYEIALSSGEKLLVSQANPQWQAVAQQRLIGQPVTACWAREAMVPLLEER
modified: 2018-11-07

-9218573284721157074tt5
reference: A0A370S4X7-1
position: 5
type: ExactPosition
type: Position

-9218573284721157074tt44
position: 44
type: ExactPosition
type: Position
reference: A0A370S4X7-1

SIP58DE2F464E026125
type: Structured Name
full name: Putative spermidine/putrescine transport system ATP-binding protein

PS50893
database: PROSITE
signature sequence match: PROSITE PS50893 match 1
type: Resource
comment: ABC_TRANSPORTER_2
signature sequence match: PROSITE PS50893 match 2

PS00211
signature sequence match: PROSITE PS00211 match 1
database: PROSITE
type: Resource
comment: ABC_TRANSPORTER_1
signature sequence match: PROSITE PS00211 match 2

SSF50331
comment: SSF50331
database: SUPFAM
type: Resource
signature sequence match: SUPFAM SSF50331 match 1

PF08402
comment: TOBE_2
type: Resource
signature sequence match: Pfam PF08402 match 1
database: Pfam

SIPAA63A142B88EA4A3
submitted to: EMBL/GenBank/DDBJ
title: Genome sequencing of rice bacterial endophytes.
type: Submission Citation
date: 2018-07
author: Venturi V.

IPR003593
type: Resource
database: InterPro
comment: AAA+_ATPase

IPR008995
comment: Mo/tungstate-bd_C_term_dom
type: Resource
database: InterPro

SIPD5168519564EA731
full name: ABC transporter ATP-binding protein
type: Structured Name

IPR013611
database: InterPro
comment: Transp-assoc_OB_typ2
type: Resource

SM00382
comment: AAA
type: Resource
signature sequence match: SMART SM00382 match 1
database: SMART
signature sequence match: SMART SM00382 match 2

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

UPMP2128
type: Strain

MF_01151
database: HAMAP
signature sequence match: HAMAP MF 01151 match 1
type: Resource
comment: GrpE

IPR013805
database: InterPro
comment: GrpE_coiled_coil
type: Resource

A0A7X5FVT4
annotation: SIP28E7E5B68223BDFF
classified with: GO_0051087
classified with: GO_0005737
proteome: Unassembled WGS sequence
version: 4
recommended name: SIP3B7139FA524DD3EB
classified with: GO_0000774
alternative name: SIP346BF82BEFF0C0A5
classified with: GO_0006457
proteome: Chromosome
citation: http://purl.uniprot.org/citations/30087402
organism: http://purl.uniprot.org/taxonomy/1563222
annotation: SIPCB22BB448F6AA469
annotation: SIP19A6CC6A18E5D18C
created: 2021-06-02
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/143
annotation: SIPD6AAE2FE15420BA9
modified: 2022-08-03
reviewed: false
mnemonic: A0A7X5FVT4_9ENTR
annotation: SIP0171B4942301580F
sequence: MSSKEQKTPEGQAPEEIIMDQHEEVEAVESDASAEQVDPRDEKIANLEAQLAEAETRERDSVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVLDSLDRALEVANKDNDAMAAMVEGIELTRKSMLDVVAKFGVQVVADIDVPMDPNVHQAIAMVESDEVAAGNVLMVMQKGYTLNGRTIRAAMVSVAKAKS
type: Protein
classified with: http://purl.uniprot.org/keywords/963
annotation: SIPB93FE86C37FE6FC0
classified with: http://purl.uniprot.org/keywords/346
citation: SIPCFBE2A8D15878CD2
classified with: GO_0042803

-9218553404154376146tt41
type: ExactPosition
reference: MSSKEQKTPEGQAPEEIIMDQHEEVEAVESDASAEQVDPRDEKIANLEAQLAEAETRERDSVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVLDSLDRALEVANKDNDAMAAMVEGIELTRKSMLDVVAKFGVQVVADIDVPMDPNVHQAIAMVESDEVAAGNVLMVMQKGYTLNGRTIRAAMVSVAKAKS
position: 41
type: Position

SIPCFBE2A8D15878CD2
author: Slattery S.
submitted to: EMBL/GenBank/DDBJ
author: Pembroke J.T.
title: Characterization of a multidrug resistant Citrobacter pasteurii.
type: Submission Citation
date: 2020-01
author: Ryan M.P.

-9218553404154376146tt1
type: Position
type: ExactPosition
position: 1
reference: MSSKEQKTPEGQAPEEIIMDQHEEVEAVESDASAEQVDPRDEKIANLEAQLAEAETRERDSVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVLDSLDRALEVANKDNDAMAAMVEGIELTRKSMLDVVAKFGVQVVADIDVPMDPNVHQAIAMVESDEVAAGNVLMVMQKGYTLNGRTIRAAMVSVAKAKS

grpE
orf name: CUC49_13495
type: Gene
orf name: GXN37_06860

IPR000740
type: Resource
comment: GrpE
database: InterPro

-9218553404154376146tt16
position: 16
reference: MSSKEQKTPEGQAPEEIIMDQHEEVEAVESDASAEQVDPRDEKIANLEAQLAEAETRERDSVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVLDSLDRALEVANKDNDAMAAMVEGIELTRKSMLDVVAKFGVQVVADIDVPMDPNVHQAIAMVESDEVAAGNVLMVMQKGYTLNGRTIRAAMVSVAKAKS
type: Position
type: ExactPosition

SIPB93FE86C37FE6FC0
type: Region Annotation
range: -9218553404154376146tt1tt41
comment: Disordered

PF01025
signature sequence match: Pfam PF01025 match 1
type: Resource
database: Pfam
comment: GrpE

A0A7X5FVT4-citation-30087402
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP28E7E5B68223BDFF
type: Subunit Annotation
comment: Homodimer.

SIPD6AAE2FE15420BA9
type: Function Annotation
comment: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding.

PTHR21237
comment: PTHR21237
database: PANTHER
signature sequence match: PANTHER PTHR21237 match 1
type: Resource

SIPCB22BB448F6AA469
comment: Basic and acidic residues
range: -9218553404154376146tt16tt41
type: Compositional Bias Annotation

MSSKEQKTPEGQAPEEIIMDQHEEVEAVESDASAEQVDPRDEKIANLEAQLAEAETRERDSVLRIKAEMENLRRRTELDVEKAHKFALEKFVNELLPVLDSLDRALEVANKDNDAMAAMVEGIELTRKSMLDVVAKFGVQVVADIDVPMDPNVHQAIAMVESDEVAAGNVLMVMQKGYTLNGRTIRAAMVSVAKAKS
version: 1
mass: 21788
modified: 2021-06-02
type: Simple Sequence

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SSF51064
database: SUPFAM
signature sequence match: SUPFAM SSF51064 match 1
type: Resource
comment: SSF51064

PR00773
database: PRINTS
comment: GRPEPROTEIN
type: Resource

SSF58014
database: SUPFAM
signature sequence match: SUPFAM SSF58014 match 1
comment: SSF58014
type: Resource

IPR009012
comment: GrpE_head
database: InterPro
type: Resource

SIP3B7139FA524DD3EB
full name: Protein GrpE
type: Structured Name

cd00446
comment: GrpE
database: CDD
signature sequence match: CDD cd00446 match 1
type: Resource

UL-CPE-01
type: Strain

SIP346BF82BEFF0C0A5
full name: HSP-70 cofactor
type: Structured Name

UMH17
type: Strain

SIP19A6CC6A18E5D18C
comment: Belongs to the GrpE family.
type: Similarity Annotation

http://purl.uniprot.org/uniprot/A0A854CMK1#gene-MD5232173A1E7C92AD1350B18D5AFAF8F0C
type: Gene
orf name: EBA20_22610
orf name: BXO512_06715
orf name: BXO512_008140

A0A854CMK1
modified: 2022-08-03
citation: SIPF4E0CEB23374CE1A
created: 2021-09-29
classified with: GO_0005886
annotation: SIPEE679860BE991551
existence: Inferred from Homology Existence
recommended name: SIP87057BB3931842AF
annotation: SIP29A1DA131660A31E
reviewed: false
mnemonic: A0A854CMK1_XANOO
classified with: http://purl.uniprot.org/keywords/1133
classified with: http://purl.uniprot.org/keywords/1003
version: 4
sequence: MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
type: Protein
proteome: Chromosome
annotation: SIP0C3658EA0767F0F6
organism: http://purl.uniprot.org/taxonomy/64187
citation: SIPBEE7883D9752EEFC
annotation: SIPC4A07CB58E4193F3
citation: SIP324876D6F7D129C5
citation: SIP11DEC3F3CA2FD03
classified with: GO_0016021

-9218551415795432402tt7
reference: MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
type: Position
position: 7
type: ExactPosition

MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
mass: 5658
modified: 2021-09-29
version: 1
type: Simple Sequence

SIP11DEC3F3CA2FD03
title: Population genomics of rice bacterial leaf blight strains from India.
author: Sundaram R.M.
author: Midha S.
author: Anil M.G.
date: 2015-01
author: Sonti R.V.
author: Brahma K.
author: Mishra D.
type: Submission Citation
author: Laha G.S.
submitted to: EMBL/GenBank/DDBJ
author: Patil P.B.

-9218551415795432402tt24
reference: MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
position: 24
type: Position
type: ExactPosition

-9218551415795432402tt30
reference: MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
type: Position
type: ExactPosition
position: 30

A0A854CMK1-citation-SIP11DEC3F3CA2FD03
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR009760
comment: DUF1328
type: Resource
database: InterPro

MF_01361
signature sequence match: HAMAP MF 01361 match 1
type: Resource
comment: UPF0391
database: HAMAP

SIP87057BB3931842AF
full name: UPF0391 membrane protein BXO512_008140
type: Structured Name

SIPBEE7883D9752EEFC
type: Submission Citation
author: Liu S.
author: Huguet-Tapia J.C.
submitted to: EMBL/GenBank/DDBJ
author: White F.
date: 2018-10
title: Xanthomonas oryzae pv. oryzae.

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PIRSF036466
database: PIRSF
comment: UCP036466
type: Resource
signature sequence match: PIRSF PIRSF036466 match 1

SIPC4A07CB58E4193F3
type: Similarity Annotation
comment: Belongs to the UPF0391 family.

PF07043
comment: DUF1328
signature sequence match: Pfam PF07043 match 1
database: Pfam
type: Resource

-9218551415795432402tt47
type: Position
type: ExactPosition
reference: MLHYAMIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
position: 47

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

KXO85
type: Strain

SIPEE679860BE991551
type: Transmembrane Annotation
comment: Helical
range: -9218551415795432402tt7tt24

SIP324876D6F7D129C5
type: Submission Citation
date: 2015-01
author: Patil P.B.
submitted to: EMBL/GenBank/DDBJ
author: Anil M.G.
author: Brahma K.
author: Sonti R.V.
author: Sundaram R.M.
author: Laha G.S.
author: Mishra D.
author: Midha S.

SIPF4E0CEB23374CE1A
date: 2020-11
author: Kaur A.
author: Rana R.
title: Complete genome investigation of Xanthomonas oryzae strains.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Patil P.B.

SIP0C3658EA0767F0F6
type: Caution Annotation
comment: Lacks conserved residue(s) required for the propagation of feature annotation.

BXO512
type: Strain

SIP29A1DA131660A31E
comment: Helical
range: -9218551415795432402tt30tt47
type: Transmembrane Annotation

IPR000755
type: Resource
database: InterPro
comment: A_A_dipeptidase

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

98se
type: Strain

SIP02E64530A77A4D6C
short name: D-Ala-D-Ala dipeptidase
full name: D-alanyl-D-alanine dipeptidase
type: Structured Name
ec name: 3.4.13.22

A0A2X5BXG1
existence: Inferred from Homology Existence
classified with: GO_0008237
created: 2018-09-12
annotation: SIP33E3290D4400365A
annotation: SIPF91ADF4B634D6115
classified with: http://purl.uniprot.org/keywords/732
annotation: SIP6A193B281CAFD09B
proteome: Unassembled WGS sequence
classified with: GO_0016805
annotation: SIPFE0DC1F74C588203
classified with: GO_0006508
annotation: SIP3EB7E2F3AED02F58
citation: SIP88704396492168D9
reviewed: false
mnemonic: A0A2X5BXG1_SALET
classified with: http://purl.uniprot.org/keywords/479
enzyme: http://purl.uniprot.org/enzyme/3.4.13.22
classified with: http://purl.uniprot.org/keywords/961
annotation: SIPA8C435EF99F12B01
recommended name: SIP02E64530A77A4D6C
version: 19
classified with: GO_0008270
organism: http://purl.uniprot.org/taxonomy/59201
type: Protein
annotation: SIPCC68022AF849D7C7
annotation: SIP93E9263D3B9BFE77
annotation: SIP01B1581D1CD0CEA2
annotation: SIP6F69A7509172076B
annotation: PRO_5033775542
classified with: http://purl.uniprot.org/keywords/862
classified with: http://purl.uniprot.org/keywords/224
modified: 2022-08-03
classified with: GO_0071555
annotation: SIP1D0129D7A14DE1FD
sequence: A0A2X5BXG1-1
classified with: http://purl.uniprot.org/keywords/482

-9218575394653486034tt1
position: 1
type: ExactPosition
reference: A0A2X5BXG1-1
type: Position

PF01427
signature sequence match: Pfam PF01427 match 1
signature sequence match: Pfam PF01427 match 2
database: Pfam
comment: Peptidase_M15
type: Resource

-9218575394653486034tt99
type: Position
reference: A0A2X5BXG1-1
type: ExactPosition
position: 99

-9218575394653486034tt256
reference: A0A2X5BXG1-1
type: Position
position: 256
type: ExactPosition

-9218575394653486034tt20
position: 20
type: ExactPosition
reference: A0A2X5BXG1-1
type: Position

-9218575394653486034tt235
type: Position
position: 235
reference: A0A2X5BXG1-1
type: ExactPosition

-9218575394653486034tt232
type: Position
position: 232
reference: A0A2X5BXG1-1
type: ExactPosition

SIP88704396492168D9
submitted to: EMBL/GenBank/DDBJ
title: Non-Typhoidal Salmonella genome sequencing and assembly.
author: Matchawe C.
type: Submission Citation
date: 2018-03

SSF55166
type: Resource
signature sequence match: SUPFAM SSF55166 match 1
comment: SSF55166
database: SUPFAM

-9218575394653486034tt144
reference: A0A2X5BXG1-1
type: Position
position: 144
type: ExactPosition

-9218575394653486034tt21
type: ExactPosition
position: 21
reference: A0A2X5BXG1-1
type: Position

A0A2X5BXG1-1
version: 1
value: MVKCVSSFLLFSLLSVQAMSAENHIDLHQPKDFVDITTVAPDVQVDMRYFTSHNFIGRPIKGYNAPVCLLTRPAANAVKQVADRLRPFGLTLKIYDCYRPQSAVNDFIAWAKDPSQNQMKNEFYPQVEKKRLFEEGYLAARSGHSRGSTLDLTIVPLDSKIPIYDPGRPLVNCTASAAQRSPDNSLDFGTGFDCFSPLSHPDNAMLTAQQRANRLLLQTLMRDAGFTPLDTEWWHFSLTHEPYPNTWFDFPVKQRP
mass: 29014
modified: 2018-09-12
type: Simple Sequence

SIP6F69A7509172076B
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

-9218575394653486034tt151
reference: A0A2X5BXG1-1
type: Position
position: 151
type: ExactPosition

PRO_5033775542
type: Chain Annotation
range: -9218575394653486034tt21tt256
mass: 26841
comment: D-alanyl-D-alanine dipeptidase

100ev
type: Strain

MF_01924
type: Resource
signature sequence match: HAMAP MF 01924 match 1
comment: A_A_dipeptidase
database: HAMAP

SIPFE0DC1F74C588203
type: Similarity Annotation
comment: Belongs to the peptidase M15D family.

PIRSF026671
signature sequence match: PIRSF PIRSF026671 match 1
type: Resource
comment: AA_dipeptidase
database: PIRSF

ddpX
orf name: C9E93_08210
type: Gene
orf name: C9F05_23960
orf name: C9F01_20895

SIP3BAF37F414AD6315
comment: catalytic
subclass of: CHEBI_29105

SIP01B1581D1CD0CEA2
type: Cofactor Annotation
cofactor: CHEBI_29105
comment: Binds 1 zinc ion per subunit.

SIPF91ADF4B634D6115
comment: Proton donor/acceptor
range: -9218575394653486034tt232tt232
type: Active Site Annotation

SIP1D0129D7A14DE1FD
type: Function Annotation
comment: Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.

IPR009045
comment: Hedgehog_sig/DD-Pept_Zn-bd_sf
type: Resource
database: InterPro

32evb
type: Strain

SIP6A193B281CAFD09B
type: Site Annotation
comment: Transition state stabilizer
range: -9218575394653486034tt99tt99

A0A3W0AZ88
sequence: A0A3W0AZ88-1
version: 18
classified with: http://purl.uniprot.org/keywords/12
citation: SIP4F4AAC041DB5FB01
recommended name: SIPD5662D4ABEB99C5D
mnemonic: A0A3W0AZ88_SALDE
classified with: http://purl.uniprot.org/keywords/963
created: 2019-07-31
annotation: SIPBDB23E117C31645B
type: Protein
citation: http://purl.uniprot.org/citations/30286803
annotation: SIP314F4FCB16C18219
classified with: GO_0006085
citation: SIPA5FB095315502327
reviewed: false
annotation: SIPE218EBB9F9760C4A
citation: SIP570B54365FC8941A
annotation: SIP97D166A9123E9FFF
classified with: GO_0005737
citation: SIPE61F435060496D9F
proteome: Unassembled WGS sequence
citation: SIPF1DB69A1DEB4A0F2
annotation: SIP92E64E6A294255F4
annotation: SIP76AAE1C46F717DE7
annotation: SIP14CBC725123A5155
alternative name: SIP5756E0DC7E4A1EA6
classified with: GO_0008959
annotation: SIP30709DC0C8B902FC
existence: Inferred from Homology Existence
annotation: SIPD17B5A65C4B052EA
annotation: SIP8ADA22B2A4B0DCA8
enzyme: http://purl.uniprot.org/enzyme/2.3.1.8
citation: http://purl.uniprot.org/citations/30902850
organism: http://purl.uniprot.org/taxonomy/28144
modified: 2022-08-03
annotation: SIP0117E65FD9249955

A0A3W0AZ88-citation-30902850
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

NY-N20088
type: Strain

FSIS11811993
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

http://purl.uniprot.org/uniprot/A0A3W0AZ88#gene-MD5B1EB712136117BDDB056DEA69E5884F1
orf name: D3Y46_13655
orf name: GB374_14915
orf name: GBY02_16335
orf name: G4X31_001135
orf name: GBZ32_21595
orf name: AHW28_18245
orf name: APM66_15855
orf name: BKQ95_07455
orf name: AGP76_18875
orf name: GBZ49_03120
orf name: GNB73_003416
orf name: ASI53_09935
orf name: GBW16_19055
orf name: G0E14_15505
orf name: B7M84_10530
orf name: G0E05_06070
orf name: GB249_21185
orf name: DPL28_18905
orf name: G4B92_003071
orf name: B7N53_10040
orf name: DU743_12220
orf name: GB369_21600
orf name: G4D33_003113
orf name: A6D66_17845
orf name: G9X07_000620
orf name: G4X28_002753
orf name: B7M93_17725
type: Gene
orf name: A3071_23805
orf name: FG671_003550
orf name: GBV43_21860
orf name: B9Q99_15190
orf name: G9W30_003682
orf name: G9W03_004383
orf name: G4W05_002310
orf name: B1280_15780
orf name: A2J39_15885
orf name: DKO97_17350
orf name: G0B06_15090
orf name: ZU66_20170
orf name: G4H65_003176
orf name: AX397_19100
orf name: EOZ49_14420
orf name: GB449_21875
orf name: A3Z62_07405
orf name: G3378_002575
orf name: B7N09_20495
orf name: GB096_14340
orf name: B7M71_04315
orf name: A4R56_17605
orf name: DNB94_09360
orf name: G2307_21525
orf name: G0E16_16170
orf name: DKP15_19075
orf name: G4W07_001715
orf name: G3457_002002
orf name: EJW65_18055
orf name: GB497_21130
orf name: GNC20_003525
orf name: G4H56_003921
orf name: EUR47_16495
orf name: AL800_20300
orf name: G3377_002982

69894
type: Strain

-9218571086866538450tt344
type: ExactPosition
position: 344
reference: A0A3W0AZ88-1
type: Position

170294
type: Strain

252405
type: Strain

IPR042113
database: InterPro
type: Resource
comment: P_AcTrfase_dom1

FDA00000938
type: Strain

IPR042112
database: InterPro
type: Resource
comment: P_AcTrfase_dom2

HIY0144
type: Strain

SSF75138
type: Resource
database: SUPFAM
comment: SSF75138
signature sequence match: SUPFAM SSF75138 match 1

IPR010766
database: InterPro
type: Resource
comment: DRTGG

FSIS11816337
type: Strain

PIRSF006107
type: Resource
comment: PhpActrans_proteobac
signature sequence match: PIRSF PIRSF006107 match 1
database: PIRSF

CVM N57264F
type: Strain

SIP5756E0DC7E4A1EA6
type: Structured Name
full name: Phosphotransacetylase

IPR004614
comment: P_AcTrfase
database: InterPro
type: Resource

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

FSIS31801020
type: Strain

620480
type: Strain

FSIS21823119
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

TIGR00651
signature sequence match: TIGRFAMs TIGR00651 match 1
database: TIGRFAMs
comment: pta
type: Resource

A0A3W0AZ88-1
type: Simple Sequence
value: MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRAGGDAPDQTTTIVRANSTLPAAEPLKMSHVESLLSSNQKDVLMEEIIANYHANTKDAEVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLNERIELTRSSFGGAKNTNITGVIINKLNAPVDEQGRTRPDLSEIFDDSSKAQVIKIDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLNATIINEGDIKTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYVNAEWIESLTATSERSRRLSPPAFRYQLTELARKAGKRVVLPEGDEPRTVKAAAICAERGIATCVLLGNPDEINRVAASQGVELGAGIEIVDPEVVRESYVARLVELRKSKGMTEPVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAIAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQASQQQQ
version: 1
modified: 2019-07-31
mass: 77278

304435
type: Strain

SIP0117E65FD9249955
comment: The N-terminal region seems to be important for proper quaternary structure. The C-terminal region contains the substrate-binding site.
type: Domain Annotation

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

-9218571086866538450tt706
type: Position
position: 706
reference: A0A3W0AZ88-1
type: ExactPosition

FSIS1710875
type: Strain

260046
type: Strain

-9218571086866538450tt391
reference: A0A3W0AZ88-1
type: ExactPosition
position: 391
type: Position

NVSL 5283
type: Strain

IPR016475
database: InterPro
type: Resource
comment: P-Actrans_bac

-9218571086866538450tt233
position: 233
reference: A0A3W0AZ88-1
type: Position
type: ExactPosition

SIPD5662D4ABEB99C5D
ec name: 2.3.1.8
full name: Phosphate acetyltransferase
type: Structured Name

PF07085
type: Resource
database: Pfam
comment: DRTGG
signature sequence match: Pfam PF07085 match 1

BCW_2672
type: Strain

FSIS1606118
type: Strain

PF01515
type: Resource
database: Pfam
comment: PTA_PTB
signature sequence match: Pfam PF01515 match 1

Salmonella enterica
type: Strain

FSIS1605837
type: Strain

318351
type: Strain

NVSL 5558
type: Strain

A0A3W0AZ88-citation-30286803
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

FSIS1606285
type: Strain

CVM N57632F
type: Strain

CVM N53019
type: Strain

IPR028979
type: Resource
database: InterPro
comment: Ser_kin/Pase_Hpr-like_N_sf

FDA00004475
type: Strain

SIP97D166A9123E9FFF
comment: Involved in acetate metabolism.
type: Function Annotation

IPR002505
comment: PTA_PTB
type: Resource
database: InterPro

SIP14CBC725123A5155
type: Caution Annotation
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

SIP76AAE1C46F717DE7
type: Domain Extent Annotation
range: -9218571086866538450tt233tt344
comment: DRTGG

PNUSAS004667
type: Strain

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

SIP4F4AAC041DB5FB01
date: 2018-07
group: NARMS: The National Antimicrobial Resistance Monitoring System
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ

SIPD17B5A65C4B052EA
range: -9218571086866538450tt391tt706
comment: PTA_PTB
type: Domain Extent Annotation

PNUSAS008389
type: Strain

FSIS1605546
type: Strain

414730
type: Strain

SIPBDB23E117C31645B
type: Similarity Annotation
comment: In the N-terminal section; belongs to the CobB/CobQ family.

FSIS11810652
type: Strain

232778
type: Strain

FSIS11810200
type: Strain

SIP30709DC0C8B902FC
comment: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family.
type: Similarity Annotation

SIP8ADA22B2A4B0DCA8
type: Subunit Annotation
comment: Homohexamer.

HIY0317
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

A0A3Y2ECZ2
recommended name: SIPAED7CA97AE47E7A3
classified with: http://purl.uniprot.org/keywords/676
alternative name: SIPF90374BD106CDB40
annotation: SIP21FE551BAFC0D362
annotation: SIPB235F5D71DB5757A
citation: http://purl.uniprot.org/citations/30286803
classified with: GO_0017004
classified with: GO_0030288
citation: SIP88704396492168D9
classified with: http://purl.uniprot.org/keywords/201
classified with: GO_0015036
proteome: Unassembled WGS sequence
mnemonic: A0A3Y2ECZ2_SALET
reviewed: false
annotation: SIPD374F38E42B65530
sequence: MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKPVPAFRLESLETPGQYYEAEVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGLNYKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNARVWESELKPLWDRYSREAAQ
modified: 2022-08-03
citation: SIPECD4C3A8F3797B60
citation: SIPF02C8CC0126F997E
classified with: http://purl.uniprot.org/keywords/1015
organism: http://purl.uniprot.org/taxonomy/59201
classified with: GO_0005886
version: 18
existence: Inferred from Homology Existence
created: 2019-05-08
type: Protein
annotation: SIP0F3221330ADAFC82

IPR004799
type: Resource
comment: Periplasmic_diS_OxRdtase_DsbE
database: InterPro

AUSMDU00020854
type: Strain

SIPB235F5D71DB5757A
comment: Thioredoxin
range: -9218570940592781266tt39tt177
type: Domain Extent Annotation

dsbE
orf name: G2988_22935
orf name: F3Q63_24140
orf name: F3P74_23110
type: Gene
orf name: F3Q64_23085
orf name: G0D55_22465
orf name: C9E93_18890

PF08534
type: Resource
signature sequence match: Pfam PF08534 match 1
comment: Redoxin
database: Pfam

SIPF02C8CC0126F997E
group: GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
date: 2019-09

-9218570940592781266tt177
reference: MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKPVPAFRLESLETPGQYYEAEVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGLNYKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNARVWESELKPLWDRYSREAAQ
type: Position
position: 177
type: ExactPosition

SIP21FE551BAFC0D362
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

98se
type: Strain

IPR036249
comment: Thioredoxin-like_sf
database: InterPro
type: Resource

PS00194
type: Resource
database: PROSITE
signature sequence match: PROSITE PS00194 match 1
comment: THIOREDOXIN_1

cd03010
type: Resource
database: CDD
signature sequence match: CDD cd03010 match 1
comment: TlpA_like_DsbE

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

TIGR00385
comment: dsbE
type: Resource
signature sequence match: TIGRFAMs TIGR00385 match 1
database: TIGRFAMs

MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKPVPAFRLESLETPGQYYEAEVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGLNYKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNARVWESELKPLWDRYSREAAQ
mass: 20639
version: 1
type: Simple Sequence
modified: 2019-05-08

IPR017937
comment: Thioredoxin_CS
type: Resource
database: InterPro

-9218570940592781266tt39
position: 39
type: Position
reference: MKRNVLLLPLLIFLLIAAALLWQLARNAEGDDPTNLESALTGKPVPAFRLESLETPGQYYEAEVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGLNYKDDRAKAVAWLKELGNPYALSLSDSDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNARVWESELKPLWDRYSREAAQ
type: ExactPosition

IPR013740
comment: Redoxin
database: InterPro
type: Resource

SIPD374F38E42B65530
type: Similarity Annotation
comment: Belongs to the thioredoxin family. DsbE subfamily.

SIPAED7CA97AE47E7A3
full name: Thiol:disulfide interchange protein DsbE
type: Structured Name

A0A3Y2ECZ2-citation-30286803
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

Salmonella enterica
type: Strain

PS51352
signature sequence match: PROSITE PS51352 match 1
comment: THIOREDOXIN_2
database: PROSITE
type: Resource

SSF52833
database: SUPFAM
signature sequence match: SUPFAM SSF52833 match 1
type: Resource
comment: SSF52833

AUSMDU00020808
type: Strain

SIPF90374BD106CDB40
full name: Cytochrome c biogenesis protein CcmG
type: Structured Name

AUSMDU00020873
type: Strain

13-7154
type: Strain

IPR013766
database: InterPro
comment: Thioredoxin_domain
type: Resource

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

http://purl.uniprot.org/uniprot/A0A837QDZ5#gene-MD5E99F5EB67431BB02B45D174D5158A588
orf name: APD31_02995
type: Gene
orf name: APD31_19415
orf name: APD31_10250

PF03837
database: Pfam
type: Resource
signature sequence match: Pfam PF03837 match 1
comment: RecT

A0A837QDZ5
submitted name: SIP1FFF7DC55374D36E
type: Protein
proteome: Unassembled WGS sequence
citation: SIPDE122EF3F8AC7A1E
reviewed: false
annotation: SIP77B2551763E27F45
organism: http://purl.uniprot.org/taxonomy/470
created: 2021-09-29
sequence: A0A837QDZ5-1
modified: 2022-08-03
classified with: GO_0003677
classified with: GO_0006310
existence: Predicted Existence
mnemonic: A0A837QDZ5_ACIBA
version: 4

SIP1FFF7DC55374D36E
full name: Recombinase
type: Structured Name

A0A837QDZ5-1
version: 1
modified: 2021-09-29
value: MSNIVLSQVSKIASAFNMQDVDPAELANTLVNTVFKKATNDEFLSLLIVANQYKLNPFTKEIYAFPAKGGGITPVVGIDGWARIINDNPVCDGIQFEQDDESCTCKIFRKDRNHPTVVTEYLSECQGNSEPWKKYPKRMLRHKALIQCARVAFGFSGIYDEDEARRIDDCHIPTVQTVSSDVPQGYEAYEQQHLDNMRDLAMEGTEALQTGYAELPQGDCKKYFWTKHSASLKEAAQHADQPQGQVYEHSPA
mass: 28315
type: Simple Sequence

IPR018330
type: Resource
comment: RecT_fam
database: InterPro

SIP77B2551763E27F45
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.
type: Caution Annotation

TIGR01913
type: Resource
comment: bet_lambda
database: TIGRFAMs
signature sequence match: TIGRFAMs TIGR01913 match 1

ABBL070
type: Strain

IPR010183
database: InterPro
type: Resource
comment: Phage_lambda_Bet

A0A854CMM6-1
type: Simple Sequence
mass: 34943
value: MNLRDLKYLVALADHKHFGRAATACFVSQPTLSTQIKKLEDELGVSLVERAPRKVMLTPAGREAALRARSIVAEVEQMKEAARRSQDPEAGTVRLGIFPTLAPYLLPHVVPRIRERFPRLELLLIEEKSDQLMHQLREGRLDAALLALPLQDDQLHAEFLFEEPFVLAVPEGHPLSRHDNMTLDALSEQRLLLLGDGHCLREQALDVCHLAGALEKSEFQATSLETLRQMVAANVGVTLLPLLAVKPPVARSDNIRLIRFRDDKQPSRRIGMAWRRSSAMTAFLDQLSQLFKELPDSLFTLDQPAAGPKAVAA
modified: 2021-09-29
version: 1

PF00126
type: Resource
comment: HTH_1
signature sequence match: Pfam PF00126 match 1
database: Pfam

IPR036390
type: Resource
database: InterPro
comment: WH_DNA-bd_sf

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

IPR000847
database: InterPro
comment: Tscrpt_reg_HTH_LysR
type: Resource

A0A854CMM6
submitted name: SIP299EF4AD35B6C7D5
reviewed: false
organism: http://purl.uniprot.org/taxonomy/64187
citation: SIPBEE7883D9752EEFC
classified with: GO_0003700
citation: SIP11DEC3F3CA2FD03
mnemonic: A0A854CMM6_XANOO
type: Protein
created: 2021-09-29
version: 4
existence: Inferred from Homology Existence
proteome: Chromosome
citation: SIPF4E0CEB23374CE1A
annotation: SIP67A3CA790651B855
submitted name: SIP622C9BDBC474034A
citation: SIP324876D6F7D129C5
modified: 2022-08-03
annotation: SIPE45156536B4CD239
sequence: A0A854CMM6-1

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

SSF46785
signature sequence match: SUPFAM SSF46785 match 1
type: Resource
comment: SSF46785
database: SUPFAM

A0A854CMM6-citation-SIP11DEC3F3CA2FD03
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

PF03466
comment: LysR_substrate
database: Pfam
signature sequence match: Pfam PF03466 match 1
type: Resource

IPR036388
type: Resource
database: InterPro
comment: WH-like_DNA-bd_sf

KXO85
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

PR00039
type: Resource
comment: HTHLYSR
database: PRINTS

http://purl.uniprot.org/uniprot/A0A854CMM6#gene-MD5BB64A63FDA51D8A87A2E402F5C25131F
type: Gene
orf name: BXO512_015085
orf name: BXO512_07615
orf name: EBA20_05770

-9218551415795394514tt1
reference: A0A854CMM6-1
position: 1
type: Position
type: ExactPosition

SIPE45156536B4CD239
type: Domain Extent Annotation
range: -9218551415795394514tt1tt58
comment: HTH lysR-type

SIP622C9BDBC474034A
full name: Transcriptional regulator
type: Structured Name

-9218551415795394514tt58
type: Position
position: 58
reference: A0A854CMM6-1
type: ExactPosition

SIP67A3CA790651B855
comment: Belongs to the LysR transcriptional regulatory family.
type: Similarity Annotation

PS50931
signature sequence match: PROSITE PS50931 match 1
comment: HTH_LYSR
database: PROSITE
type: Resource

IPR005119
type: Resource
database: InterPro
comment: LysR_subst-bd

BXO512
type: Strain

SIP299EF4AD35B6C7D5
type: Structured Name
full name: LysR family transcriptional regulator

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

A0A854DN96
modified: 2022-08-03
type: Protein
mnemonic: A0A854DN96_XANOO
submitted name: SIP9538A168AFB84428
created: 2021-09-29
citation: SIPBEE7883D9752EEFC
citation: SIPF4E0CEB23374CE1A
proteome: Chromosome
existence: Predicted Existence
organism: http://purl.uniprot.org/taxonomy/64187
reviewed: false
submitted name: SIP1CC46B12C7CAB9E0
version: 4
citation: SIP11DEC3F3CA2FD03
citation: SIP324876D6F7D129C5
sequence: A0A854DN96-1

KXO85
type: Strain

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

A0A854DN96-1
type: Simple Sequence
value: MNTNAPPLPDDLPLTDRLRAALDLLEAIEADRSVLDTLPEADRVRLHQVVAKVYHPEPKARRQLLKQRERERHQEKVRKAEALLEQRGIRALRRKPVFSTPNYFPPHAAGLHDAHNGENAAAAPAPTHSPELRHCYVCKQKFTELHHFYDQMCPACAELNFFKRTETADLRGRVALLTGGRVKIGYQAGLKLLRAGAELIVTTRFPRDSAARYAQEPDFAQWGHRLQVFGLDLRHTPSVEAFCNELLATRERLDFIINNACQTVRRPPQFYAHMMAGETAALHELPETVRNLVGHYEGLRTPELLRDASATALPAVHGRGLDSADGLTRAAELSQIALLDDELVGQQHLFPDGRLDQDLQQVDLRGRNSWRLLMAEVPSVELLETQLVNAIAPFIINARLKPLMLRTPERDKHIVNVSAMEGQFYRNFKTTRHPHTNMAKAALNMMTRTSAADYQNDGIHMNSVDTGWVTDEDPAEIAALKVQQERFHPPLDIVDGAARIVDPIIHGFNTGEHVWGQFLKDYAPTDW
mass: 59475
version: 1
modified: 2021-09-29

SIP1CC46B12C7CAB9E0
full name: Oxidoreductase
type: Structured Name

IPR002347
database: InterPro
comment: SDR_fam
type: Resource

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PF00106
database: Pfam
comment: adh_short
type: Resource
signature sequence match: Pfam PF00106 match 1

http://purl.uniprot.org/uniprot/A0A854DN96#gene-MD54E77A66243F06D766FEBA1E0BC09A98C
orf name: EBA20_21710
orf name: BXO512_007300
orf name: BXO512_04495
type: Gene

A0A854DN96-citation-SIP11DEC3F3CA2FD03
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP9538A168AFB84428
full name: SDR family oxidoreductase
type: Structured Name

BXO512
type: Strain

A0A0F7H9N4
classified with: GO_0005840
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/862
proteome: Unassembled WGS sequence
created: 2015-07-22
reviewed: false
modified: 2022-08-03
classified with: http://purl.uniprot.org/keywords/689
classified with: GO_0046872
organism: http://purl.uniprot.org/taxonomy/47917
annotation: SIPD4EA639E86B0CE42
classified with: GO_0006412
proteome: Chromosome 1
annotation: SIP043762A446A5C144
recommended name: SIP1359E5F8E0B63CB1
annotation: SIP3BBDE6AFCEF9ADAB
type: Protein
classified with: GO_0003735
existence: Inferred from Homology Existence
annotation: SIPF81017F9E2BEB5EA
proteome: Chromosome
citation: SIPD81500D7D8A64381
mnemonic: A0A0F7H9N4_SERFO
annotation: SIPAC1F94E28FF7B57D
classified with: http://purl.uniprot.org/keywords/479
classified with: GO_0019843
annotation: SIP83D70916B869B86D
version: 34
citation: SIPDD8041C7201704B9
classified with: http://purl.uniprot.org/keywords/699
annotation: SIPC67A2729018BB7A6
sequence: MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK
annotation: SIPF42DBF8C947BCA0C
citation: SIPD622B3134EFF08E5

PS01143
type: Resource
signature sequence match: PROSITE PS01143 match 1
comment: RIBOSOMAL_L31
database: PROSITE

UPMP2131
type: Strain

MF_00501
database: HAMAP
comment: Ribosomal_L31_1
type: Resource
signature sequence match: HAMAP MF 00501 match 1

SIP1359E5F8E0B63CB1
full name: 50S ribosomal protein L31
type: Structured Name

-9218585418736889810tt40
type: ExactPosition
position: 40
type: Position
reference: MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK

NCTC13193
type: Strain

MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK
modified: 2015-07-22
version: 1
mass: 7880
type: Simple Sequence

SIPDD8041C7201704B9
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Ee R.
title: Complete Genome Sequencing of Serratia Fonticola DSM-4576.
author: Chan K.-G.
date: 2015-04

IPR002150
type: Resource
comment: Ribosomal_L31
database: InterPro

-9218585418736889810tt18
position: 18
type: Position
type: ExactPosition
reference: MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PR01249
type: Resource
comment: RIBOSOMALL31
database: PRINTS

TIGR00105
database: TIGRFAMs
type: Resource
comment: L31
signature sequence match: TIGRFAMs TIGR00105 match 1

SSF143800
comment: SSF143800
type: Resource
database: SUPFAM
signature sequence match: SUPFAM SSF143800 match 1

IPR034704
comment: L28p-like
type: Resource
database: InterPro

IPR042105
database: InterPro
comment: Ribosomal_L31_sf
type: Resource

SIPAC1F94E28FF7B57D
cofactor: CHEBI_29105
comment: Binds 1 zinc ion per subunit.
type: Cofactor Annotation

SIPD81500D7D8A64381
author: Richter L.
author: Du Plessis E.M.
type: Submission Citation
author: Duvenage S.
submitted to: EMBL/GenBank/DDBJ
author: Korsten L.
author: Allam M.
title: Food and environmental bacterial isolates.
date: 2020-08

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPF42DBF8C947BCA0C
comment: Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
type: Similarity Annotation

rpmE
type: Gene
orf name: WN53_07010
orf name: NCTC13193_05708
orf name: H8I91_16215

DSM 4576
type: Strain

PF01197
database: Pfam
type: Resource
comment: Ribosomal_L31
signature sequence match: Pfam PF01197 match 1

-9218585418736889810tt16
position: 16
type: Position
type: ExactPosition
reference: MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK

IPR027491
comment: Ribosomal_L31_A
database: InterPro
type: Resource

PTHR33280
type: Resource
comment: PTHR33280
signature sequence match: PANTHER PTHR33280 match 1
database: PANTHER

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

-9218585418736889810tt37
reference: MKKGIHPKYDEVTANCSCGNVIKIRSTVGHDLNLDVCGECHPFYTGKQRDVATGGRVDRFNKRFSVPGVKK
type: Position
position: 37
type: ExactPosition

SIPC67A2729018BB7A6
comment: Binds the 23S rRNA.
type: Function Annotation

SIPF81017F9E2BEB5EA
comment: Part of the 50S ribosomal subunit.
type: Subunit Annotation

-9218585418723698642tt62
type: ExactPosition
reference: A0A0F7HF36-1
type: Position
position: 62

-9218585418723698642tt221
position: 221
type: ExactPosition
reference: A0A0F7HF36-1
type: Position

SIPE87242CC58F1CB13
range: -9218585418723698642tt74tt96
comment: Helical
type: Transmembrane Annotation

SIP8A742E9B869C3D9C
range: -9218585418723698642tt318tt340
comment: Helical
type: Transmembrane Annotation

-9218585418723698642tt192
type: Position
position: 192
type: ExactPosition
reference: A0A0F7HF36-1

A0A0F7HF36
submitted name: SIPFF59C19FE30790DF
version: 30
annotation: SIP89FA8A927751D34F
annotation: SIPDDB030EB1E28DDB7
modified: 2022-08-03
annotation: SIPEE211E03732F6333
proteome: Unassembled WGS sequence
citation: SIPDD8041C7201704B9
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0005887
annotation: SIPB9C67B5C34A52306
organism: http://purl.uniprot.org/taxonomy/47917
classified with: GO_0055085
annotation: SIP0D40A3A05BDE38E0
classified with: http://purl.uniprot.org/keywords/1185
annotation: SIP028C9D9F339157F0
annotation: SIP0C454840DCB65962
sequence: A0A0F7HF36-1
submitted name: SIP334CB51473E52FD5
proteome: Chromosome 1
mnemonic: A0A0F7HF36_SERFO
existence: Predicted Existence
proteome: Chromosome
annotation: SIPF98EA1BBCE41F73C
created: 2015-07-22
annotation: SIP715A60FED91A5479
annotation: SIPF8C0186FDFECC490
annotation: SIP8A742E9B869C3D9C
type: Protein
annotation: SIP96884078BB5D1976
reviewed: false
annotation: SIPE87242CC58F1CB13
annotation: SIP2778B092E86F77EE
citation: SIPFDD3EBA21E92E3EE

-9218585418723698642tt190
type: Position
type: ExactPosition
position: 190
reference: A0A0F7HF36-1

SIPDDB030EB1E28DDB7
range: -9218585418723698642tt169tt190
comment: Helical
type: Transmembrane Annotation

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

A0A0F7HF36-1
version: 1
type: Simple Sequence
modified: 2015-07-22
mass: 38903
value: MKSHNDPGRSKSRHTEYSLIFPIAALVVLNLWSGTSSFPLIVAINIIALVGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPALMRDTLYSIIMIVTAGLVGVALLLGGRKFATQYVNLGGIKQYLMAILPLAVIVLVLPSALPGGNFSVGQSLLVAAISAAMYGVFLLIQTKTHQSLFVYEHEDDDGDPHHGKPSSHSSLWHASWLIVHLVAVIAVTKFNANPLEGLLTKLNAPTQFTGFLVALLILSPEGLGALRAVLNNQVQRAMNLFFGSVLATISLTVPAVTIIATLTGQTLIFGLQAPHMVVMLTVLILCHISFSTGRTNVLNGTAHLALFAAYMMTIFA

-9218585418723698642tt74
reference: A0A0F7HF36-1
type: Position
position: 74
type: ExactPosition

-9218585418723698642tt238
position: 238
type: Position
type: ExactPosition
reference: A0A0F7HF36-1

SIP028C9D9F339157F0
type: Transmembrane Annotation
range: -9218585418723698642tt258tt278
comment: Helical

SIPFDD3EBA21E92E3EE
submitted to: EMBL/GenBank/DDBJ
date: 2019-05
type: Submission Citation
group: Pathogen Informatics

-9218585418723698642tt40
type: ExactPosition
type: Position
reference: A0A0F7HF36-1
position: 40

-9218585418723698642tt169
type: Position
type: ExactPosition
position: 169
reference: A0A0F7HF36-1

-9218585418723698642tt163
type: Position
type: ExactPosition
reference: A0A0F7HF36-1
position: 163

SIPB9C67B5C34A52306
type: Transmembrane Annotation
range: -9218585418723698642tt17tt34
comment: Helical

-9218585418723698642tt290
type: Position
position: 290
type: ExactPosition
reference: A0A0F7HF36-1

-9218585418723698642tt42
type: ExactPosition
type: Position
reference: A0A0F7HF36-1
position: 42

-9218585418723698642tt96
reference: A0A0F7HF36-1
position: 96
type: Position
type: ExactPosition

-9218585418723698642tt108
position: 108
type: ExactPosition
reference: A0A0F7HF36-1
type: Position

-9218585418723698642tt278
type: Position
type: ExactPosition
position: 278
reference: A0A0F7HF36-1

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIPFF59C19FE30790DF
full name: Calcium/sodium:proton antiporter
type: Structured Name

-9218585418723698642tt318
position: 318
type: ExactPosition
type: Position
reference: A0A0F7HF36-1

SIP0C454840DCB65962
type: Transmembrane Annotation
range: -9218585418723698642tt145tt163
comment: Helical

-9218585418723698642tt34
type: ExactPosition
reference: A0A0F7HF36-1
type: Position
position: 34

-9218585418723698642tt145
type: Position
type: ExactPosition
reference: A0A0F7HF36-1
position: 145

PF01699
signature sequence match: Pfam PF01699 match 2
database: Pfam
type: Resource
signature sequence match: Pfam PF01699 match 1
comment: Na_Ca_ex

-9218585418723698642tt258
type: Position
type: ExactPosition
reference: A0A0F7HF36-1
position: 258

-9218585418723698642tt133
type: Position
type: ExactPosition
position: 133
reference: A0A0F7HF36-1

-9218585418723698642tt17
type: ExactPosition
reference: A0A0F7HF36-1
type: Position
position: 17

SIP0D40A3A05BDE38E0
comment: Helical
type: Transmembrane Annotation
range: -9218585418723698642tt108tt133

IPR004837
comment: NaCa_Exmemb
type: Resource
database: InterPro

-9218585418723698642tt365
type: Position
position: 365
type: ExactPosition
reference: A0A0F7HF36-1

-9218585418723698642tt363
type: Position
type: ExactPosition
position: 363
reference: A0A0F7HF36-1

chaA
type: Gene
orf name: WN53_23725
orf name: NCTC13193_03562
orf name: NCTC12965_01232

-9218585418723698642tt347
position: 347
type: ExactPosition
reference: A0A0F7HF36-1
type: Position

DSM 4576
type: Strain

SIP715A60FED91A5479
comment: Helical
type: Transmembrane Annotation
range: -9218585418723698642tt221tt238

SIP89FA8A927751D34F
range: -9218585418723698642tt40tt62
comment: Helical
type: Transmembrane Annotation

SIP334CB51473E52FD5
full name: Calcium/proton antiporter
type: Structured Name

-9218585418723698642tt312
position: 312
type: ExactPosition
type: Position
reference: A0A0F7HF36-1

NCTC13193
type: Strain

-9218585418723698642tt226
type: ExactPosition
reference: A0A0F7HF36-1
type: Position
position: 226

-9218585418723698642tt340
type: ExactPosition
reference: A0A0F7HF36-1
type: Position
position: 340

SIPEE211E03732F6333
range: -9218585418723698642tt42tt192
type: Domain Extent Annotation
comment: Na_Ca_ex

SIPF8C0186FDFECC490
comment: Helical
type: Transmembrane Annotation
range: -9218585418723698642tt290tt312

NCTC12965
type: Strain

SIP2778B092E86F77EE
range: -9218585418723698642tt347tt365
comment: Helical
type: Transmembrane Annotation

SIPF98EA1BBCE41F73C
type: Domain Extent Annotation
range: -9218585418723698642tt226tt363
comment: Na_Ca_ex

A0A156Q5U0
mnemonic: A0A156Q5U0_9ENTR
classified with: GO_0009014
classified with: http://purl.uniprot.org/keywords/479
annotation: SIP0070F555C14DBB11
replaces: A0A384H5P0
annotation: SIPD108AFF86ED61726
classified with: http://purl.uniprot.org/keywords/220
existence: Inferred from Homology Existence
annotation: SIP8A6CAA40D9EADB45
reviewed: false
sequence: A0A156Q5U0-1
classified with: http://purl.uniprot.org/keywords/170
version: 30
annotation: SIPD5A002740D4EFB8F
proteome: Unassembled WGS sequence
classified with: GO_0009089
annotation: SIP28AAC40942E9D0BB
citation: SIPFBF19BAA389629A4
classified with: GO_0019877
created: 2016-11-02
annotation: SIP5305F3757473A1D8
citation: SIP8FD44D4FA0E27698
annotation: SIPA9D859CF1CAEC836
proteome: Chromosome
classified with: http://purl.uniprot.org/keywords/378
annotation: SIPFBE2B48E8FE72F83
classified with: GO_0008270
type: Protein
classified with: http://purl.uniprot.org/keywords/862
organism: http://purl.uniprot.org/taxonomy/1812935
annotation: SIP4A3AD99FC11C8DF0
citation: SIP7E8CAD62E0226C53
annotation: SIP83F146FCF1A8FA53
annotation: SIP219FB3506FCA43FF
citation: SIPB72A1796D07CCB3C
annotation: SIP8C26A02D39263EBD
annotation: SIP8EC0EA985BCB4E0E
annotation: SIP120576B80EF5A1A1
alternative name: SIPEDF5303665E61462
recommended name: SIP940409A2ABB01B77
annotation: SIP883811292879D2C0
classified with: GO_0050897
modified: 2022-08-03
classified with: http://purl.uniprot.org/keywords/457
enzyme: http://purl.uniprot.org/enzyme/3.5.1.18

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR002933
type: Resource
comment: Peptidase_M20
database: InterPro

PF07687
type: Resource
comment: M20_dimer
signature sequence match: Pfam PF07687 match 1
database: Pfam

SIP0070F555C14DBB11
cofactor: CHEBI_29105
cofactor: CHEBI_48828
type: Cofactor Annotation
comment: Binds 2 Zn(2+) or Co(2+) ions per subunit.

IPR011650
type: Resource
database: InterPro
comment: Peptidase_M20_dimer

SIP7E8CAD62E0226C53
type: Submission Citation
title: REHAB project genomes.
author: Shaw L.P.
submitted to: EMBL/GenBank/DDBJ
date: 2020-06

-9218582192616554450tt66
type: Position
position: 66
reference: A0A156Q5U0-1
type: ExactPosition

-9218582192616554450tt68
type: Position
reference: A0A156Q5U0-1
type: ExactPosition
position: 68

E54
type: Strain

E2161
type: Strain

-9218582192616554450tt348
position: 348
type: Position
type: ExactPosition
reference: A0A156Q5U0-1

SIPEDF5303665E61462
type: Structured Name
full name: N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase

A0A156Q5U0-1
modified: 2016-11-02
type: Simple Sequence
value: MSCPVIELTQQLIRRPSLSPDDAGCQALMIERLRAIGFTVERMDFGDTQNFWAWRGQGETLAFAGHTDVVPAGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHKNRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSTEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPMLSELVAIEWDKGNEFFPPTSMQIANVKAGTGSNNVIPGDYVVQFNFRFSTELTDEMIKARVIALLEKYQLRYTVEWWLSGQPFLTQRGKLVDAVVNAIEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQIVA
version: 1
mass: 41443

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PS00758
comment: ARGE_DAPE_CPG2_1
database: PROSITE
type: Resource
signature sequence match: PROSITE PS00758 match 1

-9218582192616554450tt99
position: 99
reference: A0A156Q5U0-1
type: Position
type: ExactPosition

2
subclass of: CHEBI_29105

e54
type: Strain

SIP940409A2ABB01B77
full name: Succinyl-diaminopimelate desuccinylase
ec name: 3.5.1.18
short name: SDAP desuccinylase
type: Structured Name

e2161
type: Strain

PS00759
comment: ARGE_DAPE_CPG2_2
database: PROSITE
type: Resource
signature sequence match: PROSITE PS00759 match 1

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

OIPH-N260
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

dapE
orf name: OIPHN260_34550
type: Gene
orf name: SAMEA2273122_05121
orf name: SAMEA2273443_02924
orf name: A3461_17455
orf name: HV150_17400

SIP5305F3757473A1D8
type: Subunit Annotation
comment: Homodimer.

SSF55031
comment: SSF55031
signature sequence match: SUPFAM SSF55031 match 1
type: Resource
database: SUPFAM

MF_01690
comment: DapE
type: Resource
signature sequence match: HAMAP MF 01690 match 1
database: HAMAP

-9218582192616554450tt175
type: Position
position: 175
reference: A0A156Q5U0-1
type: ExactPosition

SIP8EC0EA985BCB4E0E
comment: Belongs to the peptidase M20A family. DapE subfamily.
type: Similarity Annotation

-9218582192616554450tt281
type: Position
reference: A0A156Q5U0-1
position: 281
type: ExactPosition

-9218582192616554450tt162
type: Position
reference: A0A156Q5U0-1
position: 162
type: ExactPosition

SIP883811292879D2C0
comment: M20_dimer
range: -9218582192616554450tt175tt281
type: Domain Extent Annotation

TIGR01246
comment: dapE_proteo
type: Resource
signature sequence match: TIGRFAMs TIGR01246 match 1
database: TIGRFAMs

IPR005941
comment: DapE_proteobac
type: Resource
database: InterPro

RHBSTW-00309
type: Strain

SIP8C26A02D39263EBD
comment: Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls.
type: Function Annotation

-9218582192616554450tt134
type: Position
position: 134
type: ExactPosition
reference: A0A156Q5U0-1

-9218582192616554450tt133
type: Position
position: 133
type: ExactPosition
reference: A0A156Q5U0-1

SIP83F146FCF1A8FA53
type: Active Site Annotation
comment: Proton acceptor
range: -9218582192616554450tt133tt133

PF01546
type: Resource
comment: Peptidase_M20
database: Pfam
signature sequence match: Pfam PF01546 match 1

IPR001261
database: InterPro
comment: ArgE/DapE_CS
type: Resource

IPR036264
type: Resource
database: InterPro
comment: Bact_exopeptidase_dim_dom

GN04673
type: Strain

1
subclass of: CHEBI_29105

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

PS00041
comment: HTH_ARAC_FAMILY_1
signature sequence match: PROSITE PS00041 match 1
type: Resource
database: PROSITE

SIP8015044AF34E0C
title: Draft Genome Sequences of 72 Isolates from All Four Species of Shigella.
type: Submission Citation
author: Patel I.R.
author: Lacher D.W.
author: Tartera C.
author: Mukherjee A.
date: 2018-08
submitted to: EMBL/GenBank/DDBJ
author: Mammel M.K.
author: Jackson S.A.
author: Elkins C.A.
author: Gangiredla J.

A0A238B8G8
reviewed: false
classified with: GO_0003700
proteome: Chromosome
submitted name: SIP1FF3588F208F7BBA
classified with: GO_0043565
mnemonic: A0A238B8G8_SHIBO
modified: 2022-08-03
created: 2017-10-25
citation: SIP690C456C934E507B
version: 30
citation: SIP8015044AF34E0C
submitted name: SIP288FA54280FD37A3
citation: SIP5DED6864F83FB978
proteome: Unassembled WGS sequence
annotation: SIPF5248B567F7A954B
sequence: A0A238B8G8-1
citation: SIPD2E413730CF96E32
organism: http://purl.uniprot.org/taxonomy/621
classified with: http://purl.uniprot.org/keywords/238
submitted name: SIP4D7F6976BAFD0990
type: Protein
existence: Predicted Existence
citation: SIP238EEE755187E98D

-9218577924422770642tt288
position: 288
type: Position
reference: A0A238B8G8-1
type: ExactPosition

A0A238B8G8-citation-SIP8015044AF34E0C
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR028082
type: Resource
comment: Peripla_BP_I
database: InterPro

xylR
type: Gene
orf name: CEG99_24155
orf name: G5S56_23335
orf name: UL57_17605
orf name: NCTC8576_02239

A0A238B8G8-1
version: 1
value: MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
type: Simple Sequence
mass: 44869
modified: 2017-10-25

SIPF5248B567F7A954B
type: Domain Extent Annotation
range: -9218577924422770642tt288tt386
comment: HTH araC/xylS-type

SSF46689
comment: SSF46689
type: Resource
signature sequence match: SUPFAM SSF46689 match 2
signature sequence match: SUPFAM SSF46689 match 1
database: SUPFAM

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

PR00032
comment: HTHARAC
type: Resource
database: PRINTS

NCTC8576
type: Strain

SIP690C456C934E507B
author: Hazen T.H.
submitted to: EMBL/GenBank/DDBJ
type: Submission Citation
date: 2020-08
title: Complete genome sequencing of Shigella boydii.
author: Michalski J.M.
author: Rasko D.A.

IPR009057
comment: Homeobox-like_sf
type: Resource
database: InterPro

IPR020449
database: InterPro
type: Resource
comment: Tscrpt_reg_HTH_AraC-type

SM00342
type: Resource
database: SMART
signature sequence match: SMART SM00342 match 1
comment: HTH_ARAC

PS01124
signature sequence match: PROSITE PS01124 match 1
database: PROSITE
type: Resource
comment: HTH_ARAC_FAMILY_2

IPR018062
comment: HTH_AraC-typ_CS
database: InterPro
type: Resource

600690
type: Strain

IPR018060
database: InterPro
type: Resource
comment: HTH_AraC

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

PF13377
comment: Peripla_BP_3
signature sequence match: Pfam PF13377 match 1
type: Resource
database: Pfam

SIP4D7F6976BAFD0990
type: Structured Name
full name: Xylose operon regulatory protein

PF12833
comment: HTH_18
type: Resource
database: Pfam
signature sequence match: Pfam PF12833 match 1

SSF53822
database: SUPFAM
type: Resource
comment: SSF53822
signature sequence match: SUPFAM SSF53822 match 1

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

SIP288FA54280FD37A3
type: Structured Name
full name: DNA-binding transcriptional regulator XylR

IPR046335
database: InterPro
type: Resource
comment: LacI/GalR-like_sensor

-9218577924422770642tt386
reference: A0A238B8G8-1
type: Position
type: ExactPosition
position: 386

SIP1FF3588F208F7BBA
full name: XylR family transcriptional regulator
type: Structured Name

ESBL-A07-8-2
type: Strain

DMB SH134
type: Strain

A0A6M4ZLY4
classified with: http://purl.uniprot.org/keywords/378
annotation: SIP486735AC5B912E9B
citation: SIPF45A626C047621C9
classified with: GO_0005737
proteome: Chromosome
classified with: http://purl.uniprot.org/keywords/228
classified with: GO_0005524
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/238
classified with: GO_0009381
classified with: http://purl.uniprot.org/keywords/67
recommended name: SIP7FDBAF2E890BAE84
annotation: SIP5B517BFD1B922625
citation: SIPD4CDD824170A3149
classified with: GO_0006289
annotation: SIP03E0C5A3F37E3060
classified with: GO_0009380
alternative name: SIP837205DA65AA2401
classified with: GO_0008270
classified with: GO_0003677
classified with: GO_0016887
organism: http://purl.uniprot.org/taxonomy/651
annotation: SIPD99042617938191B
classified with: GO_0009432
classified with: http://purl.uniprot.org/keywords/677
annotation: SIP5807E6F46A2C05D7
modified: 2022-08-03
annotation: SIP60920176A163B51E
classified with: http://purl.uniprot.org/keywords/267
classified with: http://purl.uniprot.org/keywords/742
annotation: SIP6159C79789190A5C
citation: SIPB06B2DD68C4BF995
reviewed: false
mnemonic: A0A6M4ZLY4_AERME
annotation: SIP23DE18BD24F3ED71
type: Protein
existence: Inferred from Homology Existence
annotation: SIP6B100DD90FC0E6B7
classified with: http://purl.uniprot.org/keywords/863
created: 2020-10-07
annotation: SIPFC2073345B37F853
sequence: A0A6M4ZLY4-1
version: 8
annotation: SIP5462D4208C72DC8C

PF17755
signature sequence match: Pfam PF17755 match 1
database: Pfam
comment: UvrA_DNA-bind
type: Resource

-9218558561078325202tt31
type: Position
position: 31
type: ExactPosition
reference: A0A6M4ZLY4-1

-9218558561078325202tt647
position: 647
type: Position
reference: A0A6M4ZLY4-1
type: ExactPosition

A0A6M4ZLY4-1
version: 1
modified: 2020-10-07
mass: 104004
value: MEKIVIRGARTHNLKNINLILPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRCPTHAIPLAAQTISQMVDQVLAQPEGTKLMLLAPVVRNRKGEHTKLLENLAAQGYIRARIDGEVCDLSDPPPLELHKKHTIEVVVDRFKVRDDLALRLAESFETALTLSGGIVLVAPMDGEEGIAPLIFSANFACPECGYSMSELEPRIFSFNNPAGACPTCDGLGVQQYFDPAKLIHDPGQSLAGGAIRGWDKRSFYYFQMLKSLAEHYKFDLEAPWEDLPAKTQEVILRGSGRTEIEFRYMNDRGDVVVRKHPFEGILHNMERRYRETESNSVREELAKYIANKSCTSCGGSRLREEARHVFVDNRNLPAIAEQSIGDALAFFEGLNLSGQRAQIAEKILKEIVERLGFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVIVVEHDEDAIRLADHVLDIGPGAGVHGGAIVAQGTPEEIIANPESLTGDYLSGRKQIAIPDERTPLTGKWLKLKGASGNNLRNVNLDLPIGVMTCVTGVSGSGKSTLINDTLFRIAHRELNKATESTPAPYREVEGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQEARSRGYLPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIHEILEMTVEDARAFFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRDTGQTLYILDEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVIKTADWIVDLGPEGGAGGGRILVTGTPEEMSRCKESHTARFLAPLLNK
type: Simple Sequence

uvrA
orf name: JJL53_01655
orf name: WP7W18E02_39120
orf name: E4188_10040
type: Gene

-9218558561078325202tt342
reference: A0A6M4ZLY4-1
position: 342
type: Position
type: ExactPosition

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218558561078325202tt281
type: ExactPosition
position: 281
type: Position
reference: A0A6M4ZLY4-1

-9218558561078325202tt937
position: 937
type: ExactPosition
reference: A0A6M4ZLY4-1
type: Position

SIPB06B2DD68C4BF995
title: Complete genome of E31.
date: 2021-01
author: Zhong C.
type: Submission Citation
submitted to: EMBL/GenBank/DDBJ
author: Cao G.

SIP23DE18BD24F3ED71
type: Subunit Annotation
comment: Forms a heterotetramer with UvrB during the search for lesions.

IPR004602
comment: UvrA
type: Resource
database: InterPro

SIP7FDBAF2E890BAE84
short name: UvrA protein
full name: UvrABC system protein A
type: Structured Name

MF_00205
comment: UvrA
type: Resource
signature sequence match: HAMAP MF 00205 match 1
database: HAMAP

PF17760
database: Pfam
signature sequence match: Pfam PF17760 match 1
type: Resource
comment: UvrA_inter

SIPD4CDD824170A3149
author: Yang M.
type: Submission Citation
author: Zhang H.
date: 2019-03
author: Shi Y.
submitted to: EMBL/GenBank/DDBJ
title: Novel transposon Tn6433 accelerates the dissemination of tet(E) in Aeromonas from aerobic biofilm under oxytetracycline stress.
author: Zhang Y.
author: Tian Z.

-9218558561078325202tt254
reference: A0A6M4ZLY4-1
type: ExactPosition
type: Position
position: 254

IPR041102
comment: UvrA_inter
type: Resource
database: InterPro

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

-9218558561078325202tt594
type: ExactPosition
reference: A0A6M4ZLY4-1
type: Position
position: 594

SIPF45A626C047621C9
author: Kuroda M.
submitted to: EMBL/GenBank/DDBJ
title: complete genome sequences of Aeromonas media str. WP7-W18-ESBL-02 isolated from wastewater treatment plant effluent.
author: Sekizuka T.
type: Submission Citation
date: 2019-12
author: Itokawa K.
author: Inamine Y.
author: Yatsu K.

-9218558561078325202tt640
type: Position
type: ExactPosition
reference: A0A6M4ZLY4-1
position: 640

-9218558561078325202tt766
type: Position
position: 766
type: ExactPosition
reference: A0A6M4ZLY4-1

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

R50-22
type: Strain

SIP6B100DD90FC0E6B7
comment: ABC transporter
range: -9218558561078325202tt342tt594
type: Domain Extent Annotation

SIPD99042617938191B
type: Caution Annotation
comment: Lacks conserved residue(s) required for the propagation of feature annotation.

-9218558561078325202tt38
type: Position
position: 38
type: ExactPosition
reference: A0A6M4ZLY4-1

SIP03E0C5A3F37E3060
type: Domain Extent Annotation
comment: ABC transporter
range: -9218558561078325202tt608tt937

IPR041552
database: InterPro
type: Resource
comment: UvrA_DNA-bd

-9218558561078325202tt740
reference: A0A6M4ZLY4-1
type: ExactPosition
position: 740
type: Position

SIP5B517BFD1B922625
comment: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
type: Function Annotation

-9218558561078325202tt608
reference: A0A6M4ZLY4-1
type: ExactPosition
position: 608
type: Position

TIGR00630
database: TIGRFAMs
signature sequence match: TIGRFAMs TIGR00630 match 1
type: Resource
comment: uvra

SIPFC2073345B37F853
comment: C4-type
range: -9218558561078325202tt254tt281
type: Zinc Finger Annotation

SIP6159C79789190A5C
range: -9218558561078325202tt740tt766
type: Zinc Finger Annotation
comment: C4-type

SIP837205DA65AA2401
full name: Excinuclease ABC subunit A
type: Structured Name

E31
type: Strain

WP7-W18-ESBL-02
type: Strain

SIP5462D4208C72DC8C
type: Similarity Annotation
comment: Belongs to the ABC transporter superfamily. UvrA family.

A0A3G3DUM3
classified with: GO_0019843
annotation: SIP355A3F7A8CFC9B36
citation: SIP9AD53E7D6A471F38
citation: http://purl.uniprot.org/citations/30902850
proteome: Unassembled WGS sequence
created: 2019-02-13
version: 21
classified with: GO_0006412
citation: http://purl.uniprot.org/citations/30286803
annotation: SIPDA3D997846E5F598
classified with: http://purl.uniprot.org/keywords/699
citation: SIP49BBFC411619AF19
classified with: http://purl.uniprot.org/keywords/689
annotation: SIPB5CDC857CE689962
mnemonic: A0A3G3DUM3_SALET
citation: SIPECD4C3A8F3797B60
citation: SIPA5FB095315502327
annotation: SIP053BDFEE65A1AF2A
organism: http://purl.uniprot.org/taxonomy/143221
modified: 2022-08-03
annotation: SIP5EE11E5C1E2B9A15
classified with: GO_0015935
annotation: SIP5766393FEE05D071
reviewed: false
existence: Inferred from Homology Existence
sequence: A0A3G3DUM3-1
type: Protein
classified with: GO_0003735
recommended name: SIPEB2382A8CC716268
citation: SIPE61F435060496D9F

PTHR11831:SF4
database: PANTHER
type: Resource
signature sequence match: PANTHER PTHR11831:SF4 match 1
comment: PTHR11831:SF4

rpsD
type: Gene
orf name: AHW86_23245
orf name: GB216_22850
orf name: AT812_02055
orf name: B1277_21625
orf name: E0563_23890
orf name: DKV27_24650
orf name: FG623_023370

SIPEB2382A8CC716268
full name: 30S ribosomal protein S4
type: Structured Name

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

A0A3G3DUM3-citation-30902850
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

MF 01306 B
type: Resource
database: HAMAP
comment: Ribosomal_S4_B
signature sequence match: HAMAP MF 01306 B match 1

176244
type: Strain

IPR002942
type: Resource
database: InterPro
comment: S4_RNA-bd

FDA00001071
type: Strain

SIPDA3D997846E5F598
comment: With S5 and S12 plays an important role in translational accuracy.
type: Function Annotation

IPR001912
comment: Ribosomal_S4/S9_N
type: Resource
database: InterPro

-9218572173296841682tt95
type: Position
reference: A0A3G3DUM3-1
type: ExactPosition
position: 95

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

-9218572173296841682tt96
type: Position
reference: A0A3G3DUM3-1
type: ExactPosition
position: 96

IPR036986
comment: S4_RNA-bd_sf
database: InterPro
type: Resource

PTHR11831
comment: PTHR11831
signature sequence match: PANTHER PTHR11831 match 1
database: PANTHER
type: Resource

A0A3G3DUM3-citation-30286803
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR018079
database: InterPro
comment: Ribosomal_S4_CS
type: Resource

A0A3G3DUM3-1
type: Simple Sequence
version: 1
mass: 23485
value: MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTYKRKPERSDLSADINEHLIVELYSK
modified: 2019-02-13

CFSAN024441
type: Strain

SIP5766393FEE05D071
comment: Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.
type: Subunit Annotation

cd00165
type: Resource
database: CDD
signature sequence match: CDD cd00165 match 1
comment: S4

285585
type: Strain

IPR022801
database: InterPro
type: Resource
comment: Ribosomal_S4/S9

PF00163
database: Pfam
comment: Ribosomal_S4
type: Resource
signature sequence match: Pfam PF00163 match 1

PNUSAS008386
type: Strain

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

PS00632
database: PROSITE
comment: RIBOSOMAL_S4
signature sequence match: PROSITE PS00632 match 1
type: Resource

-9218572173296841682tt3
position: 3
type: ExactPosition
type: Position
reference: A0A3G3DUM3-1

SIP053BDFEE65A1AF2A
comment: Ribosomal_S4
type: Domain Extent Annotation
range: -9218572173296841682tt3tt95

SIP355A3F7A8CFC9B36
type: Function Annotation
comment: One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.

SM01390
database: SMART
comment: Ribosomal_S4
type: Resource
signature sequence match: SMART SM01390 match 1

TIGR01017
type: Resource
comment: rpsD_bact
signature sequence match: TIGRFAMs TIGR01017 match 1
database: TIGRFAMs

Salmonella enterica
type: Strain

SIP5EE11E5C1E2B9A15
type: Similarity Annotation
comment: Belongs to the universal ribosomal protein uS4 family.

PF01479
database: Pfam
signature sequence match: Pfam PF01479 match 1
comment: S4
type: Resource

-9218572173296841682tt160
type: ExactPosition
reference: A0A3G3DUM3-1
type: Position
position: 160

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SM00363
type: Resource
database: SMART
comment: S4
signature sequence match: SMART SM00363 match 1

SIPB5CDC857CE689962
comment: S4
type: Domain Extent Annotation
range: -9218572173296841682tt96tt160

IPR005709
type: Resource
comment: Ribosomal_S4_bac-type
database: InterPro

HIY0083
type: Strain

SIP0FA5B9D92F71A528
type: Domain Extent Annotation
comment: Helicase C-terminal
range: -9218571125227699154tt210tt383

-9218571125227699154tt803
type: Position
type: ExactPosition
position: 803
reference: A0A3V7F251-1

hrpB
orf name: DU743_02340
orf name: G4H65_004647
orf name: G4D33_000656
orf name: A3071_13860
orf name: AL800_14475
orf name: DKP15_12270
orf name: DER_LOCUS152
orf name: AX397_10715
orf name: GBW16_18575
orf name: GB249_14015
orf name: G0E16_16665
orf name: ASI53_09660
orf name: G3377_000799
orf name: B7N09_15410
orf name: D3Y46_11145
orf name: DKO97_09765
orf name: G3378_001550
orf name: AHW28_18535
orf name: G0E05_18385
orf name: ZU66_07740
orf name: B9Q99_16375
orf name: A2J39_13255
orf name: BRS33_17575
orf name: G4W07_003862
orf name: DPL28_05235
orf name: G9W30_002234
orf name: G9X07_003205
orf name: A3Z62_20045
orf name: G3457_004071
orf name: EJW65_08005
orf name: A6D66_16490
orf name: GNB73_002007
orf name: B7M93_15365
orf name: BKQ95_02950
orf name: G9W03_003375
orf name: EOZ49_13020
orf name: GB449_15845
orf name: A4R56_14775
type: Gene
orf name: AGP76_16565
orf name: B7N53_04605
orf name: DNB94_03865
orf name: G4W05_003561
orf name: B1280_13990
orf name: G2307_11835
orf name: APM66_11275

A0A3V7F251
existence: Predicted Existence
citation: http://purl.uniprot.org/citations/30286803
classified with: GO_0003724
citation: SIP4F4AAC041DB5FB01
enzyme: http://purl.uniprot.org/enzyme/3.6.4.13
citation: SIP227CD6801836F973
submitted name: SIP404643F246D6A681
classified with: GO_0016787
proteome: Unassembled WGS sequence
classified with: http://purl.uniprot.org/keywords/347
organism: http://purl.uniprot.org/taxonomy/28144
citation: SIPF1DB69A1DEB4A0F2
annotation: SIP0213B603B6E1EF79
submitted name: SIPB84921994671DD3D
type: Protein
citation: SIPE61F435060496D9F
citation: SIP49BBFC411619AF19
classified with: GO_0005524
reviewed: false
modified: 2022-08-03
classified with: GO_0003676
annotation: SIP0FA5B9D92F71A528
mnemonic: A0A3V7F251_SALDE
submitted name: SIP60828481772D1B1D
created: 2019-07-31
version: 17
annotation: SIP0B0C5DF4544200C7
citation: SIPA5FB095315502327
sequence: A0A3V7F251-1

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

FDA00000938
type: Strain

FSIS1605546
type: Strain

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

-9218571125227699154tt824
type: Position
reference: A0A3V7F251-1
type: ExactPosition
position: 824

SM00490
comment: HELICc
database: SMART
type: Resource
signature sequence match: SMART SM00490 match 1

PNUSAS008389
type: Strain

PIRSF005496
type: Resource
database: PIRSF
signature sequence match: PIRSF PIRSF005496 match 1
comment: ATP_hel_hrpB

HIY0317
type: Strain

A0A3V7F251-1
type: Simple Sequence
version: 1
modified: 2019-07-31
mass: 90937
value: MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKTAPQVLLSAPTGAGKSTWLPLQLLQQGPVAGKILLLEPRRLAARNVSQRLAEALNEKPGETVGYRMRAQSCVGPRTRLEVVTEGVLTRMIQRDPELRGVGLVILDEFHERSLQADLALALLLDIQQGLRDDLRLLIMSATLDNDRLCQRLPDAPTIVSEGRAFPVERRYQPLAAHLRFDEAVAMATAELLRNENGSLLLFLPGVGEIQRVHEHLASRVGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHLLAKEQAERAAAQSDPEILHSDLSGLLMEVLQWGCHDPASLFWLDRPPEVNLQAARRLLLMLGALEGERLSARGQKMAAMGNDPRLAAMLVNADEGDSAATAAMLAAILEDPPRGGGTDLSVLFSRRQPGWQQRSQQLLKRLQVRNGEPDSALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAWRRMRIGQLTVSVQPLAKPSEEELHQAMLNGIRDRGLSVLNWTPEAEQFRLRLHCAAKWLPEYDWPAVDEASLLATLENWLLPHMTGVQSLRSLKSLNVTQALRGLLDYAMLQRLDSELPGHYTVPTGSRITIRYHEDNPPALAVRMQEMFGEAKTPTIAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS

TIGR01970
comment: DEAH_box_HrpB
database: TIGRFAMs
signature sequence match: TIGRFAMs TIGR01970 match 1
type: Resource

SIP227CD6801836F973
author: Menozzi I.
submitted to: EMBL/GenBank/DDBJ
date: 2019-10
author: Scaltriti E.
type: Submission Citation
author: Pongolini S.

SM00847
type: Resource
signature sequence match: SMART SM00847 match 1
database: SMART
comment: HA2

SIPB84921994671DD3D
full name: ATP-dependent helicase HrpB CDS
type: Structured Name

PF00270
comment: DEAD
database: Pfam
signature sequence match: Pfam PF00270 match 1
type: Resource

SIP0B0C5DF4544200C7
comment: Disordered
range: -9218571125227699154tt803tt824
type: Region Annotation

PF04408
database: Pfam
signature sequence match: Pfam PF04408 match 1
type: Resource
comment: HA2

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

260046
type: Strain

PF00271
database: Pfam
signature sequence match: Pfam PF00271 match 1
type: Resource
comment: Helicase_C

FSIS1710875
type: Strain

PS51192
signature sequence match: PROSITE PS51192 match 1
type: Resource
database: PROSITE
comment: HELICASE_ATP_BIND_1

A0A3V7F251-citation-30286803
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

IPR007502
type: Resource
database: InterPro
comment: Helicase-assoc_dom

NVSL 5558
type: Strain

-9218571125227699154tt29
position: 29
reference: A0A3V7F251-1
type: ExactPosition
type: Position

-9218571125227699154tt192
type: Position
type: ExactPosition
position: 192
reference: A0A3V7F251-1

-9218571125227699154tt210
type: ExactPosition
type: Position
reference: A0A3V7F251-1
position: 210

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

FSIS21823119
type: Strain

E2016008490
type: Strain

414730
type: Strain

SIP0213B603B6E1EF79
range: -9218571125227699154tt29tt192
comment: Helicase ATP-binding
type: Domain Extent Annotation

NY-N20088
type: Strain

69894
type: Strain

SM00487
database: SMART
type: Resource
comment: DEXDc
signature sequence match: SMART SM00487 match 1

IPR014001
database: InterPro
comment: Helicase_ATP-bd
type: Resource

170294
type: Strain

PS51194
type: Resource
signature sequence match: PROSITE PS51194 match 1
database: PROSITE
comment: HELICASE_CTER

SIP60828481772D1B1D
type: Structured Name
full name: ATP-dependent RNA helicase HrpB

PNUSAS004667
type: Strain

IPR011545
comment: DEAD/DEAH_box_helicase_dom
type: Resource
database: InterPro

Salmonella enterica
type: Strain

FSIS11810652
type: Strain

IPR013689
type: Resource
comment: RNA_helicase_ATP-dep_HrpB_C
database: InterPro

ER1175
type: Strain

IPR001650
comment: Helicase_C
type: Resource
database: InterPro

CVM N57264F
type: Strain

FSIS11811993
type: Strain

FSIS1605837
type: Strain

FSIS11816337
type: Strain

PF08482
comment: HrpB_C
type: Resource
database: Pfam
signature sequence match: Pfam PF08482 match 1

CVM N57632F
type: Strain

FSIS1606285
type: Strain

FSIS11810200
type: Strain

FSIS1606118
type: Strain

CVM N53019
type: Strain

232778
type: Strain

FDA00004475
type: Strain

IPR010225
database: InterPro
comment: HrpB
type: Resource

-9218571125227699154tt383
reference: A0A3V7F251-1
type: ExactPosition
position: 383
type: Position

252405
type: Strain

SIP404643F246D6A681
ec name: 3.6.4.13
full name: ATP-dependent helicase HrpB
type: Structured Name

FSIS31801020
type: Strain

A0A5F1J582
submitted name: SIPE148F4D64E1A3164
sequence: A0A5F1J582-1
classified with: GO_0016491
version: 8
annotation: SIPDE212F8FDBC2018E
created: 2019-11-13
reviewed: false
proteome: Unassembled WGS sequence
existence: Predicted Existence
type: Protein
annotation: SIP4443862C78635D0A
modified: 2022-08-03
citation: SIPC1CF7006ABED859D
submitted name: SIP0723B9CAD5584A37
citation: SIP89F2DAFDD828F299
mnemonic: A0A5F1J582_9ESCH
organism: http://purl.uniprot.org/taxonomy/2041645

A0A5F1J582-1
mass: 47221
modified: 2019-11-13
version: 1
value: MTEHTSSYYAASANQYAQFDTLNESISCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIGFGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFEGGEIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLEMLDANAIRREVASDRYTGALLDHSGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITTERLCDELARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQFGRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRVPFTAMGAAYYSLRDRLGV
type: Simple Sequence

http://purl.uniprot.org/uniprot/A0A5F1J582#gene-MD572A43EB176D7D333995AEFA8C79337E4
type: Gene
orf name: CQJ27_06040
orf name: FEK66_18110

-9218563454144477138tt29
reference: A0A5F1J582-1
type: Position
position: 29
type: ExactPosition

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

-9218563454144477138tt381
type: ExactPosition
type: Position
position: 381
reference: A0A5F1J582-1

SIPDE212F8FDBC2018E
range: -9218563454144477138tt29tt381
comment: DAO
type: Domain Extent Annotation

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

IPR006076
type: Resource
database: InterPro
comment: FAD-dep_OxRdtase

PF01266
database: Pfam
comment: DAO
type: Resource
signature sequence match: Pfam PF01266 match 1

SIPE148F4D64E1A3164
type: Structured Name
full name: Gamma-glutamylputrescine oxidoreductase

SIP4443862C78635D0A
type: Caution Annotation
comment: The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

SSF51905
type: Resource
comment: SSF51905
database: SUPFAM
signature sequence match: SUPFAM SSF51905 match 1
signature sequence match: SUPFAM SSF51905 match 2

E1130
type: Strain

SIP0723B9CAD5584A37
type: Structured Name
full name: FAD-binding oxidoreductase

A0A059ZGM7
citation: SIP2B6D7DFE44D76436
citation: SIP29AF544A40488463
annotation: SIP2C11C1DB8711BAB8
classified with: http://purl.uniprot.org/keywords/627
annotation: SIPC02DD1BE3070DF60
classified with: GO_0005737
classified with: GO_0046872
version: 72
annotation: SIPDED3408CE123AE88
alternative name: SIPED636DEF899A4628
alternative name: SIP597F760F37ED73D4
proteome: Unassembled WGS sequence
proteome: Plasmid unnamed1
citation: http://purl.uniprot.org/citations/25845845
proteome: Chromosome
citation: SIP33102A7E9D55A30A
encoded in: unnamed1
classified with: GO_0006783
citation: SIPC6E8B3E6BC67C0E3
citation: SIPD5955B8709335A8B
classified with: http://purl.uniprot.org/keywords/350
annotation: SIPC48770E415A75A76
citation: SIP77FD36852892E4A9
citation: SIPD73A531548333CD8
citation: SIP36BC0D98B391F35A
citation: SIP560FF0D6DDE40E2E
classified with: http://purl.uniprot.org/keywords/479
citation: SIPDC19F3FC6B4EB345
annotation: SIP1F6A25667EA1CF64
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/963
modified: 2022-08-03
citation: SIP226B095FCDCEE8D7
citation: SIP92AD68B446AD8B1E
citation: SIPD2E413730CF96E32
citation: SIPE543E30571F263FF
mnemonic: A0A059ZGM7_ACIBA
recommended name: SIPCA94E902223274A4
classified with: GO_0004325
classified with: http://purl.uniprot.org/keywords/408
classified with: http://purl.uniprot.org/keywords/456
citation: SIP6A8CF85D691AF963
proteome: Chromosome 1
citation: SIP4719BF1553D16FBD
citation: SIPF828D3918CC3C46A
type: Protein
citation: SIP428EAA15160E7C1E
created: 2014-09-03
annotation: SIP0F895E64EDA8FEBB
reviewed: false
annotation: SIP46FD55514EDBE825
organism: http://purl.uniprot.org/taxonomy/470
enzyme: http://purl.uniprot.org/enzyme/4.99.1.1
citation: SIP34CEB23AAA1B4EEA
classified with: http://purl.uniprot.org/keywords/614
sequence: A0A059ZGM7-1
citation: SIP8E5318F527F5A423
annotation: SIPB347CDAC627D273B
citation: SIP9C7BBC9A1F1916E4

TG60155
type: Strain

NCTC13421
type: Strain

PB364
type: Strain

MDR-CQH
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

-9218586577155433426tt202
position: 202
reference: A0A059ZGM7-1
type: Position
type: ExactPosition

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

IPR033659
database: InterPro
type: Resource
comment: Ferrochelatase_N

…
scope: NUCLEOTIDE SEQUENCE
type: Citation Statement

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

cd00419
database: CDD
comment: Ferrochelatase_C
type: Resource
signature sequence match: CDD cd00419 match 1

AB5075-UW
type: Strain

IPR033644
database: InterPro
comment: Ferrochelatase_C
type: Resource

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

TIGR00109
database: TIGRFAMs
comment: hemH
type: Resource
signature sequence match: TIGRFAMs TIGR00109 match 1

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

NCTC13305
type: Strain

A0A059ZGM7-1
mass: 38276
version: 1
value: MSFEQKPKVTVILANLGTPDEATVPAVRRFLKQFLSDPRVIEIPKFIWWIILNLFVLPFRPKRVAHAYASVWSTDSPMREIVFEQTQRVQAYLERENKQFDLTVLPAMTYGNPGIDAVLEKLATNPQEHVILLPLFPQYSATSTAPLYDAFAKWIPTQRNLPGLTIIKDYYQHPMFIQALAESVLAYQEQHGKPEKLLMSFHGIPQPYADKGDPYADRCRITAKLVAEALHLKDDEWAISFQSRFGKQEWVKPYTDQLLQDWAKQGVKSVQVLSPAFSADCLETLEELAIQNAELFQQAGGGSYAYIPALNSDQAHIDLLAGLVQANLDALTHTLAHR
modified: 2014-09-03
type: Simple Sequence

Ac576
type: Strain

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

cd03411
type: Resource
comment: Ferrochelatase_N
signature sequence match: CDD cd03411 match 1
database: CDD

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]

IPR019772
comment: Ferrochelatase_AS
type: Resource
database: InterPro

XH731
type: Strain

SIPCA94E902223274A4
ec name: 4.99.1.1
full name: Ferrochelatase
type: Structured Name

hemH
orf name: NCTC13421_03465
orf name: E2533_18775
orf name: E2532_17740
orf name: E2541_17015
orf name: EA720_008620
orf name: CBL15_16625
orf name: E2540_14525
orf name: NCTC13305_02048
orf name: AYR68_01295
orf name: CTZ19_17405
orf name: C6N18_02755
orf name: E2538_10055
orf name: DLI72_07315
orf name: CSB70_0108
orf name: ABUW_3498
orf name: FE003_17505
orf name: E2539_17410
orf name: GNY86_16100
orf name: BS065_17065
orf name: D8O08_016175
orf name: E2534_17070
orf name: F2P40_10800
orf name: B7L45_17530
orf name: FDN00_03515
orf name: E2535_17215
orf name: BAA1790NC_3288
type: Gene
orf name: E2536_11825
orf name: DLI71_09645

MDR-CQD
type: Strain

XH859
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement

VB33071
type: Strain

AR_0070
type: Strain

SAA14
type: Strain

…
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
type: Citation Statement
context: unnamed1

MF_00323
type: Resource
signature sequence match: HAMAP MF 00323 match 1
comment: Ferrochelatase
database: HAMAP

16533
type: Strain

PS00534
database: PROSITE
comment: FERROCHELATASE
signature sequence match: PROSITE PS00534 match 1
type: Resource

unnamed1
type: Plasmid

…
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]