A8RIX3
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 46
mnemonic: A8RIX3_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIPE5858D147CF4440C
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP577BD4060BF59532
annotation: SIPB9B156ED47595331
annotation: SIP5CF275DD65B14FC4
annotation: SIP607AA7C724FE6A20
annotation: SIP4F6BCD10039EF9F1
annotation: SIPC49D3768630DA2C9
annotation: SIP524EF094E0BA12F5
annotation: SIP52B4D5240575C493
annotation: SIP697EE504FACCE15D
annotation: SIPEF4FCBDDDD960AB0
annotation: SIP9E666FDEA225E428
annotation: SIP71022FA508ADEA80
annotation: SIPAE29D18D7D4B5741
annotation: SIPBFE9D822A4D0548B
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/663
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0016020
classified with: GO_0016747
classified with: GO_0008784
classified with: GO_0006522
sequence: A8RIX3-1

http://purl.uniprot.org/citations/17724150
type: Journal Citation
title: vanD and vanG-like gene clusters in a Ruminococcus species isolated from human bowel flora.
author: Domingo M.C.
author: Huletsky A.
author: Giroux R.
author: Picard F.J.
author: Bergeron M.G.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/17724150
date: 2007
name: Antimicrob. Agents Chemother.
volume: 51
pages: 4111-4117

A8RIX3-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

SIP392F0E6309E6283B
type: Submission Citation
author: Domingo M.-C.
author: Huletsky A.
author: Giroux R.
author: Picard F.J.
author: Bergeron M.G.
date: 2007-03
submitted to: EMBL/GenBank/DDBJ

A8RIX3-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR002656
type: Resource
database: InterPro
comment: Acyl_transf_3_dom

IPR000821
type: Resource
database: InterPro
comment: Ala_racemase

IPR001608
type: Resource
database: InterPro
comment: Ala_racemase_N

IPR020622
type: Resource
database: InterPro
comment: Ala_racemase_pyridoxalP-BS

IPR029066
type: Resource
database: InterPro
comment: PLP-binding_barrel

PF01757
type: Resource
database: Pfam
comment: Acyl_transf_3
signature sequence match: Pfam PF01757 match 1

PF01168
type: Resource
database: Pfam
comment: Ala_racemase_N
signature sequence match: Pfam PF01168 match 1

PR00992
type: Resource
database: PRINTS
comment: ALARACEMASE

SSF51419
type: Resource
database: SUPFAM
comment: PLP-binding barrel
signature sequence match: SUPFAM SSF51419 match 1

TIGR00492
type: Resource
database: TIGRFAMs
comment: alr
signature sequence match: TIGRFAMs TIGR00492 match 1

PS00395
type: Resource
database: PROSITE
comment: ALANINE_RACEMASE
signature sequence match: PROSITE PS00395 match 1

SIPE5858D147CF4440C
type: Structured Name
full name: VanTG-like protein

SIPB9B156ED47595331
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt12tt31

18357799555183406tt12
type: Position
type: ExactPosition
position: 12
reference: A8RIX3-1

18357799555183406tt31
type: Position
type: ExactPosition
position: 31
reference: A8RIX3-1

SIP5CF275DD65B14FC4
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt43tt62

18357799555183406tt43
type: Position
type: ExactPosition
position: 43
reference: A8RIX3-1

18357799555183406tt62
type: Position
type: ExactPosition
position: 62
reference: A8RIX3-1

SIP607AA7C724FE6A20
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt74tt98

18357799555183406tt74
type: Position
type: ExactPosition
position: 74
reference: A8RIX3-1

18357799555183406tt98
type: Position
type: ExactPosition
position: 98
reference: A8RIX3-1

SIP4F6BCD10039EF9F1
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt118tt138

18357799555183406tt118
type: Position
type: ExactPosition
position: 118
reference: A8RIX3-1

18357799555183406tt138
type: Position
type: ExactPosition
position: 138
reference: A8RIX3-1

SIPC49D3768630DA2C9
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt145tt166

18357799555183406tt145
type: Position
type: ExactPosition
position: 145
reference: A8RIX3-1

18357799555183406tt166
type: Position
type: ExactPosition
position: 166
reference: A8RIX3-1

SIP524EF094E0BA12F5
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt186tt205

18357799555183406tt186
type: Position
type: ExactPosition
position: 186
reference: A8RIX3-1

18357799555183406tt205
type: Position
type: ExactPosition
position: 205
reference: A8RIX3-1

SIP52B4D5240575C493
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt217tt238

18357799555183406tt217
type: Position
type: ExactPosition
position: 217
reference: A8RIX3-1

18357799555183406tt238
type: Position
type: ExactPosition
position: 238
reference: A8RIX3-1

SIP697EE504FACCE15D
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt244tt263

18357799555183406tt244
type: Position
type: ExactPosition
position: 244
reference: A8RIX3-1

18357799555183406tt263
type: Position
type: ExactPosition
position: 263
reference: A8RIX3-1

SIPEF4FCBDDDD960AB0
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt275tt295

18357799555183406tt275
type: Position
type: ExactPosition
position: 275
reference: A8RIX3-1

18357799555183406tt295
type: Position
type: ExactPosition
position: 295
reference: A8RIX3-1

SIP9E666FDEA225E428
type: Transmembrane Annotation
comment: Helical
range: 18357799555183406tt307tt329

18357799555183406tt307
type: Position
type: ExactPosition
position: 307
reference: A8RIX3-1

18357799555183406tt329
type: Position
type: ExactPosition
position: 329
reference: A8RIX3-1

SIP71022FA508ADEA80
type: Domain Extent Annotation
comment: Acyl_transf_3
range: 18357799555183406tt9tt325

18357799555183406tt9
type: Position
type: ExactPosition
position: 9
reference: A8RIX3-1

18357799555183406tt325
type: Position
type: ExactPosition
position: 325
reference: A8RIX3-1

SIPAE29D18D7D4B5741
type: Domain Extent Annotation
comment: Ala_racemase_N
range: 18357799555183406tt350tt566

18357799555183406tt350
type: Position
type: ExactPosition
position: 350
reference: A8RIX3-1

18357799555183406tt566
type: Position
type: ExactPosition
position: 566
reference: A8RIX3-1

SIPBFE9D822A4D0548B
type: Modified Residue Annotation
comment: N6-(pyridoxal phosphate)lysine
range: 18357799555183406tt377tt377

18357799555183406tt377
type: Position
type: ExactPosition
position: 377
reference: A8RIX3-1

A8RIX3-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 64328
value: MSRDRGYRGIDYARLAAAILVVAIHTSPLASFGHTGDFILTRIFARTAVPFFFMTSGFFLISSYNRNAEKLVSFVRKTAVIYGCAILFYLPLNIYNGYFNMKHLLPNIVKDLVFDGTLYHLWYLPAAVIGAAAAWTLVKKLGMKRALAVTVLLYTVGLFGDSYYGATEKIPLFWSFYSGIFEISDYTRNGIFFAPVFFVMGGIIAEQTVRISLRTCIAGTAVSLFLMLAEGMSLHYFQMQRHDSMYVMLLPVMYFLFTALTFWRGKRLEGISDFALLLYLVHPMMIVVVRLFAGLTGLHKLLVENSLIHFLAVCAVSVAGSAAVAIVWSRWKKQRRKLRRVRADRAWIEVDLNNLKHNARTLSKAMPPGCRLMAVVKANAYGHGAFETAVCLEQIGVTSFAVATIDEGIALRRWGIRGDILILGFTDPSRAKELHRYRLIQTLIDAPYAKRLARQGYIIRSHIKIDTGMHRLGFGVNERSEILRTVRSRNLNVCGIYTHLCAADSLLEDDVKFTRRQTEVFFELLEWLKEQEVTIPDIHIQSSYGLLNYPELGCSYVRAGISLYGVLSAP

A8RIY6
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 76
mnemonic: A8RIY6_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
recommended name: SIP97EEA9C6D689407F
alternative name: SIP68E9DEFDB2526EAF
alternative name: SIPB2B37D09B53E5142
enzyme: http://purl.uniprot.org/enzyme/6.3.2.4
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP5F2CF4386B0F6A5F
annotation: SIP635A0E1FA9655B20
annotation: SIPAD6138B3BC740FAF
annotation: SIP86A7BC924F85CE62
annotation: SIP44462C4C60F4EF91
annotation: SIP8BAE5E0D05C27F32
annotation: SIP143DA26110DA969D
annotation: SIP89997EC4B0C70806
annotation: SIP778CFADDCF833FED
annotation: SIPDAAB44F8D5F2B7E8
annotation: SIP30A68862D2906460
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/464
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/573
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0008716
classified with: GO_0046872
classified with: GO_0071555
classified with: GO_0009252
classified with: GO_0008360
sequence: A8RIY6-1

A8RIY6-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIY6-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

MF_00047
type: Resource
database: HAMAP
comment: Dala_Dala_lig
signature sequence match: HAMAP MF 00047 match 1

IPR011761
type: Resource
database: InterPro
comment: ATP-grasp

IPR013815
type: Resource
database: InterPro
comment: ATP_grasp_subdomain_1

IPR000291
type: Resource
database: InterPro
comment: D-Ala_lig_Van_CS

IPR005905
type: Resource
database: InterPro
comment: D_ala_D_ala

IPR011095
type: Resource
database: InterPro
comment: Dala_Dala_lig_C

IPR011127
type: Resource
database: InterPro
comment: Dala_Dala_lig_N

IPR016185
type: Resource
database: InterPro
comment: PreATP-grasp_dom_sf

PF07478
type: Resource
database: Pfam
comment: Dala_Dala_lig_C
signature sequence match: Pfam PF07478 match 1

PF01820
type: Resource
database: Pfam
comment: Dala_Dala_lig_N
signature sequence match: Pfam PF01820 match 1

PIRSF039102
type: Resource
database: PIRSF
comment: Ddl/VanB
signature sequence match: PIRSF PIRSF039102 match 1

SSF52440
type: Resource
database: SUPFAM
comment: PreATP-grasp domain
signature sequence match: SUPFAM SSF52440 match 1

TIGR01205
type: Resource
database: TIGRFAMs
comment: D_ala_D_alaTIGR
signature sequence match: TIGRFAMs TIGR01205 match 1

PS50975
type: Resource
database: PROSITE
comment: ATP_GRASP
signature sequence match: PROSITE PS50975 match 1

PS00843
type: Resource
database: PROSITE
comment: DALA_DALA_LIGASE_1
signature sequence match: PROSITE PS00843 match 1

PS00844
type: Resource
database: PROSITE
comment: DALA_DALA_LIGASE_2
signature sequence match: PROSITE PS00844 match 1

SIP97EEA9C6D689407F
type: Structured Name
full name: D-alanine--D-alanine ligase
ec name: 6.3.2.4

SIP68E9DEFDB2526EAF
type: Structured Name
full name: D-Ala-D-Ala ligase

SIPB2B37D09B53E5142
type: Structured Name
full name: D-alanylalanine synthetase

ddl
type: Gene

SIP5F2CF4386B0F6A5F
type: Function Annotation
comment: Cell wall formation.

SIPAD6138B3BC740FAF
type: Cofactor Annotation
comment: Binds 2 magnesium or manganese ions per subunit.
cofactor: CHEBI_18420
cofactor: CHEBI_29035

SIP8BAE5E0D05C27F32
type: Similarity Annotation
comment: Belongs to the D-alanine--D-alanine ligase family.

SIP143DA26110DA969D
type: Domain Extent Annotation
comment: ATP-grasp
range: 18357799555249710tt144tt344

18357799555249710tt144
type: Position
type: ExactPosition
position: 144
reference: A8RIY6-1

18357799555249710tt344
type: Position
type: ExactPosition
position: 344
reference: A8RIY6-1

18357799555249710tt298
type: Position
type: ExactPosition
position: 298
reference: A8RIY6-1

18357799555249710tt311
type: Position
type: ExactPosition
position: 311
reference: A8RIY6-1

18357799555249710tt313
type: Position
type: ExactPosition
position: 313
reference: A8RIY6-1

1
subclass of: CHEBI_18420

2
subclass of: CHEBI_18420

A8RIY6-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 38116
value: MGKKRLAVIFGGNSTEYGVSLQSAFSVLENVNQEKYEVIPIGITRQGSWYRYGGAYGKIPDDTWMRDEKNLTPVVVHQNPAVHGILELSVWENRVTQLDLAFPVLHGKNGEDGTVQGLLELAGIPIVGCGVLASALCMDKDRAHRLAGAAGISVPKAVVLQKHQKCRAVVLPEDFTYPLFVKPVRAGSSCGIAKIYGEGELDAAVSAAFCHDDEVIVEENVDGFEVGCAILGMDVLTVGRVDEIELTGGFFDFTEKYALKHSRIHMPARIDAKTEQKIQETAKNIYQVLGCSGFARVDMFLTPSGDVVFNEVNTIPGFTAHSRYPNMMKGIGLSFEQLLERLLDMYDE

A5A539
type: Protein
reviewed: false
created: 2007-05-29
modified: 2022-12-14
version: 50
mnemonic: A5A539_9FIRM
citation: SIP417C16E99A92BB1A
citation: http://purl.uniprot.org/citations/18523184
recommended name: SIP2D1B0F7B1F147B30
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIPCAE8BA838353A70B
annotation: SIP597AEEFE12EA68E7
annotation: SIPD58F40826B800861
annotation: SIP4132E3FDCAEFF1F0
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/251
classified with: http://purl.uniprot.org/keywords/342
classified with: GO_0005525
classified with: GO_0003924
classified with: GO_0003746
sequence: http://purl.uniprot.org/isoforms/A5A539-1

SIP417C16E99A92BB1A
type: Submission Citation
author: Domingo M.-C.
author: Huletsky A.
author: Boissinot M.
author: Bernard K.A.
author: Picard F.J.
author: Bergeron M.G.
date: 2007-03
submitted to: EMBL/GenBank/DDBJ

A5A539-citation-SIP417C16E99A92BB1A
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

http://purl.uniprot.org/citations/18523184
type: Journal Citation
title: Ruminococcus gauvreauii sp. nov., a glycopeptide-resistant species isolated from a human faecal specimen.
author: Domingo M.C.
author: Huletsky A.
author: Boissinot M.
author: Bernard K.A.
author: Picard F.J.
author: Bergeron M.G.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/18523184
date: 2008
name: Int. J. Syst. Evol. Microbiol.
volume: 58
pages: 1393-1397

A5A539-citation-18523184
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

cd03697
type: Resource
database: CDD
comment: EFTU_II
signature sequence match: CDD cd03697 match 1

IPR004161
type: Resource
database: InterPro
comment: EFTu-like_2

IPR033720
type: Resource
database: InterPro
comment: EFTU_2

IPR027417
type: Resource
database: InterPro
comment: P-loop_NTPase

IPR000795
type: Resource
database: InterPro
comment: T_Tr_GTP-bd_dom

IPR009000
type: Resource
database: InterPro
comment: Transl_B-barrel_sf

IPR009001
type: Resource
database: InterPro
comment: Transl_elong_EF1A/Init_IF2_C

IPR004160
type: Resource
database: InterPro
comment: Transl_elong_EFTu/EF1A_C

PF00009
type: Resource
database: Pfam
comment: GTP_EFTU
signature sequence match: Pfam PF00009 match 1

PF03144
type: Resource
database: Pfam
comment: GTP_EFTU_D2
signature sequence match: Pfam PF03144 match 1

PF03143
type: Resource
database: Pfam
comment: GTP_EFTU_D3
signature sequence match: Pfam PF03143 match 1

SSF50465
type: Resource
database: SUPFAM
comment: EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
signature sequence match: SUPFAM SSF50465 match 1

SSF52540
type: Resource
database: SUPFAM
comment: P-loop containing nucleoside triphosphate hydrolases
signature sequence match: SUPFAM SSF52540 match 1

SSF50447
type: Resource
database: SUPFAM
comment: Translation proteins
signature sequence match: SUPFAM SSF50447 match 1

PS51722
type: Resource
database: PROSITE
comment: G_TR_2
signature sequence match: PROSITE PS51722 match 1

SIP2D1B0F7B1F147B30
type: Structured Name
full name: Elongation factor Tu

tuf
type: Gene

SIPCAE8BA838353A70B
type: Similarity Annotation
comment: Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.

SIP597AEEFE12EA68E7
type: Domain Extent Annotation
comment: Tr-type G
range: 18354427667888430tt1tt105

18354427667888430tt1
type: Position
type: ExactPosition
position: 1
reference: http://purl.uniprot.org/isoforms/A5A539-1

18354427667888430tt105
type: Position
type: ExactPosition
position: 105
reference: http://purl.uniprot.org/isoforms/A5A539-1

18354427667888430tt278
type: Position
type: ExactPosition
position: 278
reference: http://purl.uniprot.org/isoforms/A5A539-1

http://purl.uniprot.org/isoforms/A5A539-1
type: Simple Sequence
modified: 2007-05-29
version: 1
fragment: single
mass: 30834
value: GAILVVAATDGVMAQTKEHILLSRQVGVPYIVVFMNKCDMVDDEELLELVDMEIRELLSEYEFPGDDTPIIQGSALKALEDPNGEWGDKVMELMAAVDSWIPDPQRDTDKPFIMPVEDVFSITGRGTVATGRVEAGVLHVSEEVEIVGIKEETRKVVVTGIEMFRKLLDEAQAGDNIGALLRGVQRTEIERGQVLAKPGSIKCHTKFTAQVYVLTKDEGGRHTPFFNNYRPQFYFRTTDVTGVISLPEGTEMCMPGDNVEMTIELIHPIAMDQVLHSL

A8RIZ6
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 63
mnemonic: A8RIZ6_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
recommended name: SIP608CC0B767CE90A2
enzyme: http://purl.uniprot.org/enzyme/2.7.13.3
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP68ABA3BCC7D7AE34
annotation: SIPDE315DFCEB8DC335
annotation: SIP7BE72E17F4482D9E
annotation: SIP03955726FEDF5FD8
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/418
classified with: http://purl.uniprot.org/keywords/597
classified with: http://purl.uniprot.org/keywords/1133
classified with: http://purl.uniprot.org/keywords/902
classified with: GO_0016020
classified with: GO_0000155
sequence: A8RIZ6-1

A8RIZ6-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIZ6-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

cd00082
type: Resource
database: CDD
comment: HisKA
signature sequence match: CDD cd00082 match 1

IPR003594
type: Resource
database: InterPro
comment: HATPase_C

IPR036890
type: Resource
database: InterPro
comment: HATPase_C_sf

IPR005467
type: Resource
database: InterPro
comment: His_kinase_dom

IPR003661
type: Resource
database: InterPro
comment: HisK_dim/P

IPR036097
type: Resource
database: InterPro
comment: HisK_dim/P_sf

IPR004358
type: Resource
database: InterPro
comment: Sig_transdc_His_kin-like_C

PF02518
type: Resource
database: Pfam
comment: HATPase_c
signature sequence match: Pfam PF02518 match 1

PF00512
type: Resource
database: Pfam
comment: HisKA
signature sequence match: Pfam PF00512 match 1

PR00344
type: Resource
database: PRINTS
comment: BCTRLSENSOR

SM00387
type: Resource
database: SMART
comment: HATPase_c
signature sequence match: SMART SM00387 match 1

SM00388
type: Resource
database: SMART
comment: HisKA
signature sequence match: SMART SM00388 match 1

SSF55874
type: Resource
database: SUPFAM
comment: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
signature sequence match: SUPFAM SSF55874 match 1

SSF47384
type: Resource
database: SUPFAM
comment: Homodimeric domain of signal transducing histidine kinase
signature sequence match: SUPFAM SSF47384 match 1

PS50109
type: Resource
database: PROSITE
comment: HIS_KIN
signature sequence match: PROSITE PS50109 match 1

SIP608CC0B767CE90A2
type: Structured Name
full name: histidine kinase
ec name: 2.7.13.3

vanSD
type: Gene

SIPDE315DFCEB8DC335
type: Transmembrane Annotation
comment: Helical
range: 18357799555315246tt20tt42

18357799555315246tt20
type: Position
type: ExactPosition
position: 20
reference: A8RIZ6-1

18357799555315246tt42
type: Position
type: ExactPosition
position: 42
reference: A8RIZ6-1

SIP7BE72E17F4482D9E
type: Transmembrane Annotation
comment: Helical
range: 18357799555315246tt79tt98

18357799555315246tt79
type: Position
type: ExactPosition
position: 79
reference: A8RIZ6-1

18357799555315246tt98
type: Position
type: ExactPosition
position: 98
reference: A8RIZ6-1

SIP03955726FEDF5FD8
type: Domain Extent Annotation
comment: Histidine kinase
range: 18357799555315246tt163tt379

18357799555315246tt163
type: Position
type: ExactPosition
position: 163
reference: A8RIZ6-1

18357799555315246tt379
type: Position
type: ExactPosition
position: 379
reference: A8RIZ6-1

A8RIZ6-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 43917
value: MKNRNKTSHEDDYLLFKNRLSVKILLMMVYSILIIAGVYLFILKDNFANVVVAILDSFIYHDRDEAVAVYLRTFKAYEIWLFLIAVMGVFFMIFRRYLDSISKYFKEINRGIDTLVNEDANDIGLPPELASTERKINSIRHTLTKRKTDAELAEQRKNDLVMYLVHDLKTPLSSVIGYLNLLRDENQISEELREKYLSISLDKAERLEELINEFFEITRFNLSNITLVYSKINLTMMLEQLGHEFKPMLAGKNLICEFDVQPDMMLSCDANKLQRVFDNVLRNAVSYCYENTTIRVKARQTEDHVLIQIINEGDTIPGERLERIFEQFYRLDVSRSSSTGGAGLGLAIAKEIVELHHGQITARSENGITSFEVALPVVGKS

A8RIY2
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 12
mnemonic: A8RIY2_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIP08B209E80EB0A7F5
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP97FA3CCED833EE45
annotation: SIP17E60AE1E8EF0813
annotation: SIP7BC73DA8DC6C383C
annotation: SIPBAF7677EB3AC020B
annotation: SIP7932E1014371CDBC
annotation: SIP281CDA818C3B37F0
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0016020
sequence: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

A8RIY2-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIY2-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR006976
type: Resource
database: InterPro
comment: VanZ-like

PF04892
type: Resource
database: Pfam
comment: VanZ
signature sequence match: Pfam PF04892 match 1

SIP08B209E80EB0A7F5
type: Structured Name
full name: VanZF-like protein

SIP97FA3CCED833EE45
type: Transmembrane Annotation
comment: Helical
range: 18357799555248686tt6tt29

18357799555248686tt6
type: Position
type: ExactPosition
position: 6
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt29
type: Position
type: ExactPosition
position: 29
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

SIP17E60AE1E8EF0813
type: Transmembrane Annotation
comment: Helical
range: 18357799555248686tt41tt64

18357799555248686tt41
type: Position
type: ExactPosition
position: 41
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt64
type: Position
type: ExactPosition
position: 64
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

SIP7BC73DA8DC6C383C
type: Transmembrane Annotation
comment: Helical
range: 18357799555248686tt100tt121

18357799555248686tt100
type: Position
type: ExactPosition
position: 100
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt121
type: Position
type: ExactPosition
position: 121
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

SIPBAF7677EB3AC020B
type: Transmembrane Annotation
comment: Helical
range: 18357799555248686tt128tt145

18357799555248686tt128
type: Position
type: ExactPosition
position: 128
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt145
type: Position
type: ExactPosition
position: 145
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

SIP7932E1014371CDBC
type: Transmembrane Annotation
comment: Helical
range: 18357799555248686tt157tt175

18357799555248686tt157
type: Position
type: ExactPosition
position: 157
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt175
type: Position
type: ExactPosition
position: 175
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

SIP281CDA818C3B37F0
type: Domain Extent Annotation
comment: VanZ
range: 18357799555248686tt50tt171

18357799555248686tt50
type: Position
type: ExactPosition
position: 50
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

18357799555248686tt171
type: Position
type: ExactPosition
position: 171
reference: MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL

MGDILGYVLIGFILMAAVAILYLPVYLVLRKKFCFLRQMSFLLLIGCCLIILLATVLISVFLGMTEGLDAMAVRHDINMIPLRWTAEEWAMGREEMLTQVAANVVMFIPFGFILPAALPVFRRFFRTMLCAACFSFLIEFAQYFIGRSSDIDDFLQNTIGGVIGYLIFLLFSKLFQTSRIWRKFTGRPL
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 21566

A8RJ13
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 48
mnemonic: A8RJ13_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIP605B981CA2F9C29D
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP256A350EC84879FB
annotation: SIPAAE101A09B6B815F
annotation: SIP2103571B51386C6B
annotation: SIP88AE2FEB70BA57BB
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/233
classified with: http://purl.uniprot.org/keywords/238
classified with: GO_0003677
classified with: GO_0015074
classified with: GO_0006310
sequence: A8RJ13-1

A8RJ13-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RJ13-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR044068
type: Resource
database: InterPro
comment: CB

IPR011010
type: Resource
database: InterPro
comment: DNA_brk_join_enz

IPR013762
type: Resource
database: InterPro
comment: Integrase-like_cat_sf

IPR002104
type: Resource
database: InterPro
comment: Integrase_catalytic

IPR010998
type: Resource
database: InterPro
comment: Integrase_recombinase_N

IPR004107
type: Resource
database: InterPro
comment: Integrase_SAM-like_N

PF02899
type: Resource
database: Pfam
comment: Phage_int_SAM_1
signature sequence match: Pfam PF02899 match 1

PF00589
type: Resource
database: Pfam
comment: Phage_integrase
signature sequence match: Pfam PF00589 match 1

SSF56349
type: Resource
database: SUPFAM
comment: DNA breaking-rejoining enzymes
signature sequence match: SUPFAM SSF56349 match 1

PS51900
type: Resource
database: PROSITE
comment: CB
signature sequence match: PROSITE PS51900 match 1

PS51898
type: Resource
database: PROSITE
comment: TYR_RECOMBINASE
signature sequence match: PROSITE PS51898 match 1

SIP605B981CA2F9C29D
type: Structured Name
full name: Integrase-like protein

intD
type: Gene

SIP256A350EC84879FB
type: Function Annotation
comment: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules.

SIPAAE101A09B6B815F
type: Similarity Annotation
comment: Belongs to the 'phage' integrase family.

SIP2103571B51386C6B
type: Domain Extent Annotation
comment: Core-binding (CB)
range: 18357799569404718tt3tt81

18357799569404718tt3
type: Position
type: ExactPosition
position: 3
reference: A8RJ13-1

18357799569404718tt81
type: Position
type: ExactPosition
position: 81
reference: A8RJ13-1

SIP88AE2FEB70BA57BB
type: Domain Extent Annotation
comment: Tyr recombinase
range: 18357799569404718tt99tt275

18357799569404718tt99
type: Position
type: ExactPosition
position: 99
reference: A8RJ13-1

18357799569404718tt275
type: Position
type: ExactPosition
position: 275
reference: A8RJ13-1

A8RJ13-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 31928
value: MKQLTEEKIQAFEESLYLNEKSKATVSKYLRTVRKLAEYLQGKELTKPRLLEYREILQNQVKAQTVNGTLSSINAFLEFCGWQDCKIKLLKVQRKAFLDETRELSEAEYKQLLAAAQAKGNERLYLVMLTICGTGIRVSELQHITVEAAQTGRAEICMKGKNRTVLLQKELRVRLLKYAKELGIDEGHIFRTRSGKPLDRTNICHDMKKLCASAKVDPRKVFPHNLRHLFARSFYAIEKNLAHLADILGHSRIETTRIYVAASATAHERILNKMKLIL

A8RIZ3
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 77
mnemonic: A8RIZ3_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
recommended name: SIP5233C46E1505BF77
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP249FE97239A9721E
annotation: SIP3F343934265D4570
annotation: SIPF91058778D6E59DA
annotation: SIPE44CE17A40F8D50B
annotation: SIPA9B7D4B68F18ADDB
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/10
classified with: http://purl.uniprot.org/keywords/238
classified with: http://purl.uniprot.org/keywords/597
classified with: http://purl.uniprot.org/keywords/805
classified with: GO_0003677
classified with: GO_0000160
classified with: GO_0006355
sequence: A8RIZ3-1

A8RIZ3-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIZ3-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

cd00383
type: Resource
database: CDD
comment: trans_reg_C
signature sequence match: CDD cd00383 match 1

IPR011006
type: Resource
database: InterPro
comment: CheY-like_superfamily

IPR001867
type: Resource
database: InterPro
comment: OmpR/PhoB-type_DNA-bd

IPR016032
type: Resource
database: InterPro
comment: Sig_transdc_resp-reg_C-effctor

IPR001789
type: Resource
database: InterPro
comment: Sig_transdc_resp-reg_receiver

IPR039420
type: Resource
database: InterPro
comment: WalR-like

IPR036388
type: Resource
database: InterPro
comment: WH-like_DNA-bd_sf

PTHR48111
type: Resource
database: PANTHER
comment: REGULATOR OF RPOS
signature sequence match: PANTHER PTHR48111 match 1

PF00072
type: Resource
database: Pfam
comment: Response_reg
signature sequence match: Pfam PF00072 match 1

PF00486
type: Resource
database: Pfam
comment: Trans_reg_C
signature sequence match: Pfam PF00486 match 1

SM00448
type: Resource
database: SMART
comment: REC
signature sequence match: SMART SM00448 match 1

SM00862
type: Resource
database: SMART
comment: Trans_reg_C
signature sequence match: SMART SM00862 match 1

SSF46894
type: Resource
database: SUPFAM
comment: C-terminal effector domain of the bipartite response regulators
signature sequence match: SUPFAM SSF46894 match 1

SSF52172
type: Resource
database: SUPFAM
comment: CheY-like
signature sequence match: SUPFAM SSF52172 match 1

PS51755
type: Resource
database: PROSITE
comment: OMPR_PHOB
signature sequence match: PROSITE PS51755 match 1

PS50110
type: Resource
database: PROSITE
comment: RESPONSE_REGULATORY
signature sequence match: PROSITE PS50110 match 1

SIP5233C46E1505BF77
type: Structured Name
full name: Stage 0 sporulation protein A homolog

vanRD
type: Gene

SIP249FE97239A9721E
type: Function Annotation
comment: May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.

SIP3F343934265D4570
type: Domain Extent Annotation
comment: Response regulatory
range: 18357799555314478tt4tt116

18357799555314478tt4
type: Position
type: ExactPosition
position: 4
reference: A8RIZ3-1

18357799555314478tt116
type: Position
type: ExactPosition
position: 116
reference: A8RIZ3-1

SIPF91058778D6E59DA
type: Domain Extent Annotation
comment: OmpR/PhoB-type
range: 18357799555314478tt133tt232

18357799555314478tt133
type: Position
type: ExactPosition
position: 133
reference: A8RIZ3-1

18357799555314478tt232
type: Position
type: ExactPosition
position: 232
reference: A8RIZ3-1

SIPE44CE17A40F8D50B
type: Nucleotide Binding Annotation
comment: OmpR/PhoB-type
range: 18357799555314478tt133tt232

SIPA9B7D4B68F18ADDB
type: Modified Residue Annotation
comment: 4-aspartylphosphate
range: 18357799555314478tt53tt53

18357799555314478tt53
type: Position
type: ExactPosition
position: 53
reference: A8RIZ3-1

A8RIZ3-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 26929
value: MNEKILVVDDEKELADLVEVYLKNDGYTVYKFYNGKDALKCIESVELDLAILDIMLPDVDGFQICQKIREKFYFPVIMLTAKVEDGDKIMGLSVADDYITKPFNPLEVVARVKAQLRQYMRYKQPSLKQEAECTEYDIRGMTISKSSHKCILFGKEIQLTPTEFSILWYLCERQGTVVSTEELFEAVWGERFFDSNNTVMAHIGRLREKMKEPSRNPKFIKTVWGVGYTIEK

A8RJ09
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 46
mnemonic: A8RJ09_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
recommended name: SIP02E64530A77A4D6C
enzyme: http://purl.uniprot.org/enzyme/3.4.13.22
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIPE0AF7B652F70BF5F
annotation: SIP8E66BD2B98FECABE
annotation: SIP8CB9216E3DC50C54
annotation: SIP9D290C760D1D2A8E
annotation: SIP69E88A70B7F4D6A4
annotation: SIP6FC9E98DC4F30877
annotation: SIP1994700D59945FE1
annotation: SIPE42024CED000CA02
annotation: SIP25D334E88BB90999
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/224
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/482
classified with: http://purl.uniprot.org/keywords/862
classified with: GO_0016805
classified with: GO_0008237
classified with: GO_0008270
classified with: GO_0071555
classified with: GO_0006508
sequence: A8RJ09-1

A8RJ09-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RJ09-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

MF_01924
type: Resource
database: HAMAP
comment: A_A_dipeptidase
signature sequence match: HAMAP MF 01924 match 1

IPR000755
type: Resource
database: InterPro
comment: A_A_dipeptidase

IPR009045
type: Resource
database: InterPro
comment: Hedgehog_sig/DD-Pept_Zn-bd_sf

PF01427
type: Resource
database: Pfam
comment: Peptidase_M15
signature sequence match: Pfam PF01427 match 1

PIRSF026671
type: Resource
database: PIRSF
comment: AA_dipeptidase
signature sequence match: PIRSF PIRSF026671 match 1

SSF55166
type: Resource
database: SUPFAM
comment: Hedgehog/DD-peptidase
signature sequence match: SUPFAM SSF55166 match 1

SIP02E64530A77A4D6C
type: Structured Name
full name: D-alanyl-D-alanine dipeptidase
short name: D-Ala-D-Ala dipeptidase
ec name: 3.4.13.22

vanXD
type: Gene

SIPE0AF7B652F70BF5F
type: Function Annotation
comment: Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.

SIP8CB9216E3DC50C54
type: Cofactor Annotation
comment: Binds 1 zinc ion per subunit.
cofactor: CHEBI_29105

SIP9D290C760D1D2A8E
type: Similarity Annotation
comment: Belongs to the peptidase M15D family.

SIP69E88A70B7F4D6A4
type: Active Site Annotation
comment: Proton donor/acceptor
range: 18357799569340718tt181tt181

18357799569340718tt181
type: Position
type: ExactPosition
position: 181
reference: A8RJ09-1

18357799569340718tt116
type: Position
type: ExactPosition
position: 116
reference: A8RJ09-1

18357799569340718tt123
type: Position
type: ExactPosition
position: 123
reference: A8RJ09-1

18357799569340718tt184
type: Position
type: ExactPosition
position: 184
reference: A8RJ09-1

SIP25D334E88BB90999
type: Site Annotation
comment: Transition state stabilizer
range: 18357799569340718tt71tt71

18357799569340718tt71
type: Position
type: ExactPosition
position: 71
reference: A8RJ09-1

SIP3BAF37F414AD6315
subclass of: CHEBI_29105
comment: catalytic

A8RJ09-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 23387
value: MKKNFAFLDEMIPGIRWDAKYATWDNFTGKPVDGYMVNRVMGTKELGVALRKAQKMAEKLGYGLLLWDGYRPQCAVDCFLNWASQPEDNLTKKRYYPNIKRNEMVAKGYVASQSSHSRGSTVDLTIFHLNSGMLVPMGGDFDFMDERSHHAASGLSEEESKNRQCLRYIMESSGFEAYRYEWWHYVLADEPYPDTYFDFCIA

A8RIZ9
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 43
mnemonic: A8RIZ9_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIP492545F02B1800DD
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP01BAB76891B1C85D
annotation: SIPC92F271A0949993E
annotation: SIP3203D987C2D15072
annotation: SIPB3A6DD2DD5810FEC
annotation: SIPC5CBCA22532DAB3F
annotation: SIP131DF5793D8E5D1D
annotation: SIPF12A3CCF9E42F719
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/121
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/573
classified with: http://purl.uniprot.org/keywords/732
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0016020
classified with: GO_0009002
classified with: GO_0071555
classified with: GO_0009252
classified with: GO_0006508
classified with: GO_0008360
sequence: A8RIZ9-1

A8RIZ9-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIZ9-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR012338
type: Resource
database: InterPro
comment: Beta-lactam/transpept-like

IPR018044
type: Resource
database: InterPro
comment: Peptidase_S11

IPR001967
type: Resource
database: InterPro
comment: Peptidase_S11_N

PF00768
type: Resource
database: Pfam
comment: Peptidase_S11
signature sequence match: Pfam PF00768 match 1

PR00725
type: Resource
database: PRINTS
comment: DADACBPTASE1

SSF56601
type: Resource
database: SUPFAM
comment: beta-lactamase/transpeptidase-like
signature sequence match: SUPFAM SSF56601 match 1

SIP492545F02B1800DD
type: Structured Name
full name: D,D carboxypeptidase

vanYD
type: Gene

SIP01BAB76891B1C85D
type: Similarity Annotation
comment: Belongs to the peptidase S11 family.

SIPC92F271A0949993E
type: Transmembrane Annotation
comment: Helical
range: 18357799555316014tt25tt50

18357799555316014tt25
type: Position
type: ExactPosition
position: 25
reference: A8RIZ9-1

18357799555316014tt50
type: Position
type: ExactPosition
position: 50
reference: A8RIZ9-1

SIP3203D987C2D15072
type: Domain Extent Annotation
comment: Peptidase_S11
range: 18357799555316014tt98tt337

18357799555316014tt98
type: Position
type: ExactPosition
position: 98
reference: A8RIZ9-1

18357799555316014tt337
type: Position
type: ExactPosition
position: 337
reference: A8RIZ9-1

SIPB3A6DD2DD5810FEC
type: Active Site Annotation
comment: Acyl-ester intermediate
range: 18357799555316014tt128tt128

18357799555316014tt128
type: Position
type: ExactPosition
position: 128
reference: A8RIZ9-1

SIPC5CBCA22532DAB3F
type: Active Site Annotation
comment: Proton acceptor
range: 18357799555316014tt131tt131

18357799555316014tt131
type: Position
type: ExactPosition
position: 131
reference: A8RIZ9-1

18357799555316014tt185
type: Position
type: ExactPosition
position: 185
reference: A8RIZ9-1

18357799555316014tt308
type: Position
type: ExactPosition
position: 308
reference: A8RIZ9-1

substrate

A8RIZ9-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 38881
value: MMEYQNNNGNYDKRNRRKAKKRKLLFYRAACVTLCLLIVSVIFGVVHFLGESKDPGLLSKENTKTDKNYSWLTDDQNEAVPSVPEPAISDQANKISVNIAAANAIVMNKDTNEVLYQKKSTAKIAPASTAKMIMALTALDYCSPEDEMKVGAEIEMIQSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKKIAGDKSLTHQQAIEVFMDKVNEKAVNLGATNSKFVAPDGYDAEGQYTTAYDLAIIAKACLDNPIISEIVASYSSYEKWPNGREVTYSNSNELLDPNSPYYRPEVIGLKTGTSSLGGACIVSAAVIDGETYICVVMGSTKESRFQDSVDILDKIKAQ

A8RIX8
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 48
mnemonic: A8RIX8_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIP877AA4C1FE046F00
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIP2A3CA510F94393D5
annotation: SIP6DDC39CB551AA0BD
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/902
classified with: GO_0016301
classified with: GO_0000160
classified with: GO_0016310
sequence: TRLLEQLVFEFGPMFGEKHLNYMLHAEPDLMILCDADKMQRVLDNLLRNAVYYSFEGSTVEIAAAFKEDAAVITVVNQGNTIPKEKLGRIFEQFYRLDTARGSNSGGAGLGLAIAREIVELHHGEITVQSKEERTTFEVTIPVS

A8RIX8-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RIX8-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP877AA4C1FE046F00
type: Structured Name
full name: VanSG-like protein

SIP2A3CA510F94393D5
type: Domain Extent Annotation
comment: Histidine kinase
range: 18357799555184686tt1tt144

18357799555184686tt1
type: Position
type: ExactPosition
position: 1
reference: TRLLEQLVFEFGPMFGEKHLNYMLHAEPDLMILCDADKMQRVLDNLLRNAVYYSFEGSTVEIAAAFKEDAAVITVVNQGNTIPKEKLGRIFEQFYRLDTARGSNSGGAGLGLAIAREIVELHHGEITVQSKEERTTFEVTIPVS

18357799555184686tt144
type: Position
type: ExactPosition
position: 144
reference: TRLLEQLVFEFGPMFGEKHLNYMLHAEPDLMILCDADKMQRVLDNLLRNAVYYSFEGSTVEIAAAFKEDAAVITVVNQGNTIPKEKLGRIFEQFYRLDTARGSNSGGAGLGLAIAREIVELHHGEITVQSKEERTTFEVTIPVS

TRLLEQLVFEFGPMFGEKHLNYMLHAEPDLMILCDADKMQRVLDNLLRNAVYYSFEGSTVEIAAAFKEDAAVITVVNQGNTIPKEKLGRIFEQFYRLDTARGSNSGGAGLGLAIAREIVELHHGEITVQSKEERTTFEVTIPVS
type: Simple Sequence
modified: 2008-01-15
version: 1
fragment: single
mass: 16103

A8RJ03
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 43
mnemonic: A8RJ03_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
submitted name: SIPEC37ACB936858312
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIPC309A5991AD256E5
annotation: SIPBE5DADE472F84AC8
annotation: SIP0A446623A98AD028
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/560
classified with: GO_0051287
classified with: GO_0016616
sequence: A8RJ03-1

A8RJ03-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RJ03-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

IPR006139
type: Resource
database: InterPro
comment: D-isomer_2_OHA_DH_cat_dom

IPR029753
type: Resource
database: InterPro
comment: D-isomer_DH_CS

IPR029752
type: Resource
database: InterPro
comment: D-isomer_DH_CS1

IPR006140
type: Resource
database: InterPro
comment: D-isomer_DH_NAD-bd

IPR036291
type: Resource
database: InterPro
comment: NAD(P)-bd_dom_sf

PF00389
type: Resource
database: Pfam
comment: 2-Hacid_dh
signature sequence match: Pfam PF00389 match 1

PF02826
type: Resource
database: Pfam
comment: 2-Hacid_dh_C
signature sequence match: Pfam PF02826 match 1

SSF51735
type: Resource
database: SUPFAM
comment: NAD(P)-binding Rossmann-fold domains
signature sequence match: SUPFAM SSF51735 match 1

PS00065
type: Resource
database: PROSITE
comment: D_2_HYDROXYACID_DH_1
signature sequence match: PROSITE PS00065 match 1

PS00670
type: Resource
database: PROSITE
comment: D_2_HYDROXYACID_DH_2
signature sequence match: PROSITE PS00670 match 1

SIPEC37ACB936858312
type: Structured Name
full name: D-lactate dehydrogenase

vanHD
type: Gene

SIPC309A5991AD256E5
type: Similarity Annotation
comment: Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.

SIPBE5DADE472F84AC8
type: Domain Extent Annotation
comment: 2-Hacid_dh
range: 18357799569339182tt13tt317

18357799569339182tt13
type: Position
type: ExactPosition
position: 13
reference: A8RJ03-1

18357799569339182tt317
type: Position
type: ExactPosition
position: 317
reference: A8RJ03-1

SIP0A446623A98AD028
type: Domain Extent Annotation
comment: 2-Hacid_dh_C
range: 18357799569339182tt113tt295

18357799569339182tt113
type: Position
type: ExactPosition
position: 113
reference: A8RJ03-1

18357799569339182tt295
type: Position
type: ExactPosition
position: 295
reference: A8RJ03-1

A8RJ03-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 35624
value: MEKIIDITVFGCEPDEMEVFQKISYELGVTATLIKDSISESNAGLANGCRCVSVSHKAELSEPILLALKNAGVKYISTRSIGFNHIDIQAAGLLGMVVGTVEYSPGSVADYTVMLMLMLMRGTKSILRETQRQNYCLNDLRGKELRDMTVGVLGTGRIGQAVMERLEGFGCKVLAYDRNQKAGADYVSFHELLKKSDIVTLHIPLAEDTRHMIGYEELEMMKQEALLINTGRGALVDTAALVEALKGQKIGGAALDVLEGEEGIFYHDCTQRRIEHPFLSVLQGMPNVIVTPHTAYHTERVLVDTVRNTIRNCLNFERSLGNV

A8RJ06
type: Protein
reviewed: false
created: 2008-01-15
modified: 2022-12-14
version: 78
mnemonic: A8RJ06_9FIRM
citation: http://purl.uniprot.org/citations/17724150
citation: SIP392F0E6309E6283B
recommended name: SIP97EEA9C6D689407F
alternative name: SIP68E9DEFDB2526EAF
alternative name: SIPB2B37D09B53E5142
enzyme: http://purl.uniprot.org/enzyme/6.3.2.4
organism: http://purl.uniprot.org/taxonomy/438033
annotation: SIPFAAF77C6B67D17AF
annotation: SIPB2CC2543B7CBEE54
annotation: SIP66FFA123454AE5D6
annotation: SIP8897CA98239A8BD6
annotation: SIPDF00BD4ED7F9E48B
annotation: SIP9C974D7C16080EF5
annotation: SIP3BC92BF8E3F78841
annotation: SIPB225267B75EE3D0F
annotation: SIP5D47BA8106EEB22E
annotation: SIPCD17AF0A518EF842
annotation: SIPDD7FBE3D9484FD11
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/67
classified with: http://purl.uniprot.org/keywords/961
classified with: http://purl.uniprot.org/keywords/963
classified with: http://purl.uniprot.org/keywords/436
classified with: http://purl.uniprot.org/keywords/460
classified with: http://purl.uniprot.org/keywords/464
classified with: http://purl.uniprot.org/keywords/479
classified with: http://purl.uniprot.org/keywords/573
classified with: GO_0005737
classified with: GO_0005524
classified with: GO_0008716
classified with: GO_0046872
classified with: GO_0071555
classified with: GO_0009252
classified with: GO_0008360
sequence: A8RJ06-1

A8RJ06-citation-17724150
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

CCRI-16110
type: Strain

A8RJ06-citation-SIP392F0E6309E6283B
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP97EEA9C6D689407F
type: Structured Name
full name: D-alanine--D-alanine ligase
ec name: 6.3.2.4

SIP68E9DEFDB2526EAF
type: Structured Name
full name: D-Ala-D-Ala ligase

SIPB2B37D09B53E5142
type: Structured Name
full name: D-alanylalanine synthetase

vanD
type: Gene
alternative label: ddl

SIPFAAF77C6B67D17AF
type: Function Annotation
comment: Cell wall formation.

SIP66FFA123454AE5D6
type: Cofactor Annotation
comment: Binds 2 magnesium or manganese ions per subunit.
cofactor: CHEBI_18420
cofactor: CHEBI_29035

SIP9C974D7C16080EF5
type: Similarity Annotation
comment: Belongs to the D-alanine--D-alanine ligase family.

SIP3BC92BF8E3F78841
type: Domain Extent Annotation
comment: ATP-grasp
range: 18357799569339950tt137tt338

18357799569339950tt137
type: Position
type: ExactPosition
position: 137
reference: A8RJ06-1

18357799569339950tt338
type: Position
type: ExactPosition
position: 338
reference: A8RJ06-1

18357799569339950tt292
type: Position
type: ExactPosition
position: 292
reference: A8RJ06-1

18357799569339950tt305
type: Position
type: ExactPosition
position: 305
reference: A8RJ06-1

18357799569339950tt307
type: Position
type: ExactPosition
position: 307
reference: A8RJ06-1

1
subclass of: CHEBI_18420

2
subclass of: CHEBI_18420

A8RJ06-1
type: Simple Sequence
modified: 2008-01-15
version: 1
mass: 38028
value: MFKIKVAVLFGGCSEEHNVSIKSAMEIAANIDTKKYQPYYIGITKSGVWKMCEKPCLEWEQYAGDPVVFSPDRSTHGLLIQKDKGYEIQPVDVVLPMIHGKFGEDGSIQGLLELSGIPYVGCDIQSSVTCMDKALAYTVVKNAGIAVPGFRILQEGDRLETEDFVYPVFVKPARSGSSFGVNKVCKAEELQAAIEEARKYDSKILIEEAVTGSEVGCAILGNGNDLMAGEVDQIELRHGFFKIHQEAQPEKGSENAVIRVPAALPDEVRERIQKTAMKIYRILGCRGLARIDLFLREDGCIVLNEVNTMPGFTSYSRYPRMMTAAGFTLTEILDRLIELSLRR