P31279
type: Protein
reviewed: true
created: 1993-07-01
modified: 2020-08-12
version: 50
mnemonic: VGC_BPAL3
citation: http://purl.uniprot.org/citations/1532908
recommended name: SIP6B8C5BBBD7726921
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP3C208914F994F032
annotation: PRO_0000164872
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0019073
sequence: MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL
proteome: Genome

http://purl.uniprot.org/citations/1532908
type: Journal Citation
title: Nucleotide sequence of the genome of the bacteriophage alpha 3: interrelationship of the genome structure and the gene products with those of the phages, phi X174, G4 and phi K.
author: Kodaira K.
author: Nakano K.
author: Okada S.
author: Taketo A.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/1532908
date: 1992
name: Biochim. Biophys. Acta
volume: 1130
pages: 277-288

P31279-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

IPR016407
type: Resource
database: InterPro
comment: C-protein

PF12025
type: Resource
database: Pfam
comment: Phage_C
signature sequence match: Pfam PF12025 match 1

PIRSF004155
type: Resource
database: PIRSF
comment: Phage_C
signature sequence match: PIRSF PIRSF004155 match 1

SIP6B8C5BBBD7726921
type: Structured Name
full name: C protein

C
type: Gene

SIP3C208914F994F032
type: Function Annotation
comment: C protein is one of the proteins involved in the production and packaging of viral single-stranded DNA.

PRO_0000164872
type: Chain Annotation
comment: C protein
mass: 8295
range: 22574284525746478tt1tt68

22574284525746478tt1
type: Position
type: ExactPosition
position: 1
reference: MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL

22574284525746478tt68
type: Position
type: ExactPosition
position: 68
reference: MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL

MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL
type: Simple Sequence
modified: 1993-07-01
version: 1
mass: 8295

P31278
type: Protein
reviewed: true
created: 1993-07-01
modified: 2022-08-03
version: 66
mnemonic: SCAFB_BPAL3
old mnemonic: VGB_BPAL3
citation: http://purl.uniprot.org/citations/1532908
recommended name: SIP9DCB31594F137654
alternative name: SIP2EB3307C231C2B47
enzyme: http://purl.uniprot.org/enzyme/3.4.-.-
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP8510631EA1B6F4A6
annotation: SIPF4B7438E45F38E7B
annotation: SIPBBF2E143615A1F87
annotation: SIP6EE1AB78DB4F56F7
annotation: SIPCB04E1B2A01B077A
annotation: PRO_0000164867
annotation: SIPDF610E578C74F4FD
annotation: SIP93D422B7F9B68373
annotation: SIP59BB45E16F383D7C
annotation: SIPC24E41C8DE693F20
annotation: SIP25D3C9B970C72F84
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/68
classified with: http://purl.uniprot.org/keywords/1035
classified with: http://purl.uniprot.org/keywords/645
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/118
classified with: GO_0030430
classified with: GO_0008233
classified with: GO_0006508
classified with: GO_0019069
sequence: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF
proteome: Genome

P31278-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

IPR003513
type: Resource
database: InterPro
comment: Phage_B

IPR038149
type: Resource
database: InterPro
comment: Phage_B_sf

PF02304
type: Resource
database: Pfam
comment: Phage_B
signature sequence match: Pfam PF02304 match 1

SIP9DCB31594F137654
type: Structured Name
full name: Internal scaffolding protein B
ec name: 3.4.-.-

SIP2EB3307C231C2B47
type: Structured Name
full name: Scaffolding protein B
short name: GPB

B
type: Gene

SIP8510631EA1B6F4A6
type: Function Annotation
comment: Participates in the assembly of the viral procapsid in the cytoplasm. Forms first a 12S pre-assembly complex with protein H, and F and G pentamers, then twelve 12S complexes are joined by the D protein to form the procapsid. Internal scaffold protein B is released from the procapsid upon genome packaging. Autoproteolytic activity cleaves protein B and probably facilitates its removal through the pores of the procapsid.

SIPF4B7438E45F38E7B
type: Subunit Annotation
comment: Component of the procapsid complex composed of 60 copies of the internally located B, 240 copies of the external scaffolding protein D, 60 copies of each of the viral structural proteins F and G proteins, and 12 copies of H.

SIP6EE1AB78DB4F56F7
type: PTM Annotation
comment: The proteolytic cleavage of the internal scaffolding protein B releases the scaffold protein in order to continue virion assembly.

SIPCB04E1B2A01B077A
type: Similarity Annotation
comment: Belongs to the microviridae B protein family.

PRO_0000164867
type: Chain Annotation
comment: Internal scaffolding protein B
mass: 13335
range: 22574284525746222tt1tt117

22574284525746222tt1
type: Position
type: ExactPosition
position: 1
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

22574284525746222tt117
type: Position
type: ExactPosition
position: 117
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIPDF610E578C74F4FD
type: Region Annotation
comment: Disordered
range: 22574284525746222tt1tt60

22574284525746222tt60
type: Position
type: ExactPosition
position: 60
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIP93D422B7F9B68373
type: Compositional Bias Annotation
comment: Polar residues
range: 22574284525746222tt1tt50

22574284525746222tt50
type: Position
type: ExactPosition
position: 50
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIP59BB45E16F383D7C
type: Site Annotation
comment: Cleavage; by autolysis
range: 22574284525746222tt74tt75

22574284525746222tt74
type: Position
type: ExactPosition
position: 74
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

22574284525746222tt75
type: Position
type: ExactPosition
position: 75
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIPC24E41C8DE693F20
type: Site Annotation
comment: Cleavage; by autolysis
range: 22574284525746222tt90tt91

22574284525746222tt90
type: Position
type: ExactPosition
position: 90
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

22574284525746222tt91
type: Position
type: ExactPosition
position: 91
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIP25D3C9B970C72F84
type: Site Annotation
comment: Cleavage; by autolysis
range: 22574284525746222tt105tt106

22574284525746222tt105
type: Position
type: ExactPosition
position: 105
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

22574284525746222tt106
type: Position
type: ExactPosition
position: 106
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF
type: Simple Sequence
modified: 1993-07-01
version: 1
mass: 13335

http://purl.uniprot.org/uniprot/P31278#attribution-548D3322DB42B22ADCB403FACBDE4707
manual: true
evidence: ECO_0000250
source: P03633

http://purl.uniprot.org/uniprot/P31278#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

P25243
type: Protein
reviewed: true
created: 1992-05-01
modified: 2022-02-23
version: 74
mnemonic: VGA_BPAL3
citation: http://purl.uniprot.org/citations/1532908
citation: http://purl.uniprot.org/citations/2785817
recommended name: SIPD9385A9DA9A3194F
alternative name: SIP37DDA09AF8200F28
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP1880F2E29256E692
annotation: PRO_0000164865
annotation: SIP5A8C277CFF43E469
annotation: SIP50DF55593E855E34
annotation: SIP0DD0D7752AE121FA
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/238
classified with: http://purl.uniprot.org/keywords/255
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/1194
classified with: http://purl.uniprot.org/keywords/863
classified with: GO_0003677
classified with: GO_0004519
classified with: GO_0046872
classified with: GO_0006260
classified with: GO_0039693
sequence: P25243-1
proteome: Genome

P25243-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

http://purl.uniprot.org/citations/2785817
type: Journal Citation
title: Possible finger structure in gene A protein of Microviridae.
author: Kodaira K.
author: Miyata T.
author: Suzuki K.
author: Nakano K.
author: Taketo A.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/2785817
date: 1989
name: Biochim. Biophys. Acta
volume: 1008
pages: 123-124

P25243-citation-2785817
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 228-257

IPR008766
type: Resource
database: InterPro
comment: Replication_gene_A

PF05840
type: Resource
database: Pfam
comment: Phage_GPA
signature sequence match: Pfam PF05840 match 1

SIPD9385A9DA9A3194F
type: Structured Name
full name: A protein

SIP37DDA09AF8200F28
type: Structured Name
full name: GPA

A
type: Gene

SIP1880F2E29256E692
type: Function Annotation
comment: The A protein is a specific endonuclease that cleaves the viral strand of supertwisted, closed circular DNA at a unique site in the A gene. The A protein also causes relaxation of supertwisted DNA and forms a complex with viral DNA that has a discontinuity in gene A of the viral strand.

PRO_0000164865
type: Chain Annotation
comment: A protein
mass: 57368
range: 22573202193789742tt1tt494

22573202193789742tt1
type: Position
type: ExactPosition
position: 1
reference: P25243-1

22573202193789742tt494
type: Position
type: ExactPosition
position: 494
reference: P25243-1

22573202193789742tt230
type: Position
type: ExactPosition
position: 230
reference: P25243-1

22573202193789742tt252
type: Position
type: ExactPosition
position: 252
reference: P25243-1

SIP50DF55593E855E34
type: Active Site Annotation
comment: O-(5'-phospho-DNA)-tyrosine intermediate
range: 22573202193789742tt327tt327

22573202193789742tt327
type: Position
type: ExactPosition
position: 327
reference: P25243-1

SIP0DD0D7752AE121FA
type: Active Site Annotation
comment: O-(5'-phospho-DNA)-tyrosine intermediate
range: 22573202193789742tt331tt331

22573202193789742tt331
type: Position
type: ExactPosition
position: 331
reference: P25243-1

P25243-1
type: Simple Sequence
modified: 1993-07-01
version: 2
mass: 57368
value: MATEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQLEKRLSEETHLDDETLAIYESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFLFEMICPGVRYGKTLNSLWTKYVVQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNRMTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQINSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKTGKAMQSKPYQAVAWYVTKYVAKQSDQRQKAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPLYQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKTIRRLMKKTPEFNWQSSIASMTVTLKNGDISDEARQYIIDAGITPTDLRAKATQTFGGK

http://purl.uniprot.org/uniprot/P25243#attribution-609619A7DF3E53CE5E48EDEF8B8F9DD1
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/P25243#attribution-DC036A124EC8E88DF072B29F6D9BB9FE
manual: true
evidence: ECO_0000255

P08765
type: Protein
reviewed: true
created: 1988-11-01
modified: 2022-12-14
version: 85
mnemonic: SCAFD_BPAL3
old mnemonic: VGD_BPAL3
citation: http://purl.uniprot.org/citations/1532908
citation: http://purl.uniprot.org/citations/6088949
conflicting sequence: SIP8DBFF6D85F6D385A
recommended name: SIP9ADB78B67DF25C86
alternative name: SIPD635429B5C89885D
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP446A3762D948C698
annotation: SIPFB0ECF18E3B72E4A
annotation: SIP2191721C16A5AE3A
annotation: SIP697440A0AC2102D0
annotation: SIPD4008B4D92E27296
annotation: PRO_0000164877
annotation: SIPACA7302735E8A448
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1035
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/118
classified with: GO_0030430
classified with: GO_0046797
sequence: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK
proteome: Genome

P08765-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

http://purl.uniprot.org/citations/6088949
type: Journal Citation
title: Isolation and some properties of bacteriophage alpha3 gene J mutant.
author: Kodaira K.
author: Taketo A.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/6088949
date: 1984
name: Mol. Gen. Genet.
volume: 195
pages: 541-543

P08765-citation-6088949
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 114-150

IPR004196
type: Resource
database: InterPro
comment: Scaffold_D

IPR036632
type: Resource
database: InterPro
comment: Scaffold_D_sf

PF02925
type: Resource
database: Pfam
comment: gpD
signature sequence match: Pfam PF02925 match 1

SSF48045
type: Resource
database: SUPFAM
comment: Scaffolding protein gpD of bacteriophage procapsid
signature sequence match: SUPFAM SSF48045 match 1

SIP9ADB78B67DF25C86
type: Structured Name
full name: External scaffolding protein D

SIPD635429B5C89885D
type: Structured Name
full name: Scaffolding protein D
short name: GPD

D
type: Gene

SIP446A3762D948C698
type: Function Annotation
comment: Assembles the procapsid by joining twelve 12S pre-assembly complex into a T=1 icosahedral particle, called 108S procapsid. Ten proteins D bind each 12S complex, which are formed by three pentamers of F, G, B protein and a H protein. The scaffolding protein is released from the provirion after genome packaging to form the mature virion.

SIPFB0ECF18E3B72E4A
type: Subunit Annotation
comment: Component of the procapsid particle composed of 60 copies of the internally located B, 240 copies of the external scaffolding protein D, 60 copies of each of the viral structural proteins F and G, and 12 copies of protein H.

SIP697440A0AC2102D0
type: Similarity Annotation
comment: Belongs to the microvirus D protein family.

SIPD4008B4D92E27296
type: Initiator Methionine Annotation
comment: Removed; by host
range: 22571016139453742tt1tt1

22571016139453742tt1
type: Position
type: ExactPosition
position: 1
reference: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK

PRO_0000164877
type: Chain Annotation
comment: External scaffolding protein D
mass: 16542
range: 22571016139453742tt2tt150

22571016139453742tt2
type: Position
type: ExactPosition
position: 2
reference: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK

22571016139453742tt150
type: Position
type: ExactPosition
position: 150
reference: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK

SIPACA7302735E8A448
type: Sequence Conflict Annotation
conflicting sequence: SIP8DBFF6D85F6D385A
substitution: PLR
range: 22571016139453742tt118tt120

22571016139453742tt118
type: Position
type: ExactPosition
position: 118
reference: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK

22571016139453742tt120
type: Position
type: ExactPosition
position: 120
reference: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK

MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK
type: Simple Sequence
modified: 1993-07-01
version: 2
mass: 16673

http://purl.uniprot.org/uniprot/P08765#attribution-C8DF0BF629A2DCE8D259A857E933B2F7
manual: true
evidence: ECO_0000250
source: P69486

http://purl.uniprot.org/uniprot/P08765#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

P03650
type: Protein
reviewed: true
created: 1986-07-21
modified: 2022-05-25
version: 74
mnemonic: VGH_BPAL3
citation: http://purl.uniprot.org/citations/1532908
citation: http://purl.uniprot.org/citations/2988629
citation: http://purl.uniprot.org/citations/387790
recommended name: SIP448573BD90690C8D
alternative name: SIPC1FBB723AA0C79BC
alternative name: SIP6C0368C1D13F8A9A
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP57D24F5E424AFB3D
annotation: SIPA41B00F2CEEAE980
annotation: SIP995215E1B069E9F8
annotation: PRO_0000164898
annotation: SIP5F06FFA9477D82E4
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/1171
classified with: GO_0019028
classified with: GO_0046718
sequence: P03650-1
proteome: Genome

P03650-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

http://purl.uniprot.org/citations/2988629
type: Journal Citation
title: Function and structure of microvirid phage alpha 3 genome. DNA sequence of H gene and properties of missense H mutant.
author: Kodaira K.
author: Nakano K.
author: Taketo A.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/2988629
date: 1985
name: Biochim. Biophys. Acta
volume: 825
pages: 255-260

P03650-citation-2988629
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

http://purl.uniprot.org/citations/387790
type: Journal Citation
title: dnaG (primase)-dependent origins of DNA replication. Nucleotide sequences of the negative strand initiation sites of bacteriophages St-1, phi K, and alpha 3.
author: Sims J.
author: Capon D.
author: Dressler D.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/387790
date: 1979
name: J. Biol. Chem.
volume: 254
pages: 12615-12628

P03650-citation-387790
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE OF 1-70

A21537
type: Resource
database: PIR
comment: ZHBPA3

IPR006777
type: Resource
database: InterPro
comment: Microvir_H

PF04687
type: Resource
database: Pfam
comment: Microvir_H
signature sequence match: Pfam PF04687 match 1

PIRSF004160
type: Resource
database: PIRSF
comment: Microvir_H
signature sequence match: PIRSF PIRSF004160 match 1

SIP448573BD90690C8D
type: Structured Name
full name: Minor spike protein

SIPC1FBB723AA0C79BC
type: Structured Name
full name: H protein

SIP6C0368C1D13F8A9A
type: Structured Name
full name: Pilot protein

H
type: Gene

SIP57D24F5E424AFB3D
type: Function Annotation
comment: Minor spike component of the viral shell. Involved in the ejection of the phage DNA in the host and is injected with the DNA in the periplasmic space of the host. Involved in the determination of the phage host-range (By similarity).

SIPA41B00F2CEEAE980
type: Subunit Annotation
comment: The virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein. There are 12 spikes which are each composed of 5 G and one H proteins.

PRO_0000164898
type: Chain Annotation
comment: Minor spike protein
mass: 34844
range: 22570994647773230tt1tt330

22570994647773230tt1
type: Position
type: ExactPosition
position: 1
reference: P03650-1

22570994647773230tt330
type: Position
type: ExactPosition
position: 330
reference: P03650-1

SIP5F06FFA9477D82E4
type: Region Annotation
comment: Disordered
range: 22570994647773230tt57tt79

22570994647773230tt57
type: Position
type: ExactPosition
position: 57
reference: P03650-1

22570994647773230tt79
type: Position
type: ExactPosition
position: 79
reference: P03650-1

P03650-1
type: Simple Sequence
modified: 1986-07-21
version: 2
mass: 34844
value: MLGAVVGGIASALASGAASKLFGGSQRGVSVMQQGAESAGLTNGGGAISMDNDQGIQSAIQGSNVPPAGQLPESQNSGVMADAGNMLRNAGKSLLDGTIQAGSDKVKQALIDKLIGGNDAKDRGKATRDYLAAAFPELNPWERAGAGASTAGLESSAQNQQKEMLKMQLDNQKDIAKMQMDNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQARVASILANTDLTTKQATHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNSRYGSSQVTAAAKDVTNMITDAASGASDWVSQQWNSFFKDGKSNGISLNTRK

http://purl.uniprot.org/uniprot/P03650#attribution-609619A7DF3E53CE5E48EDEF8B8F9DD1
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/P03650#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

P31280
type: Protein
reviewed: true
created: 1993-07-01
modified: 2022-08-03
version: 70
mnemonic: VGE_BPAL3
citation: http://purl.uniprot.org/citations/1532908
recommended name: SIP9EE9C6EDA931FA03
alternative name: SIP04E60C05B7255B0C
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP240757B5FAED5FA7
annotation: PRO_0000164882
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/578
classified with: http://purl.uniprot.org/keywords/1185
classified with: GO_0004857
classified with: GO_0019835
classified with: GO_0019054
sequence: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL
proteome: Genome

P31280-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

IPR007605
type: Resource
database: InterPro
comment: Micrvir_lysisE

PF04517
type: Resource
database: Pfam
comment: Microvir_lysis
signature sequence match: Pfam PF04517 match 1

SIP9EE9C6EDA931FA03
type: Structured Name
full name: Lysis protein
short name: E protein

SIP04E60C05B7255B0C
type: Structured Name
full name: GPE

E
type: Gene

SIP240757B5FAED5FA7
type: Function Annotation
comment: E protein is responsible for host cell lysis.

PRO_0000164882
type: Chain Annotation
comment: Lysis protein
mass: 8475
range: 22574284525809710tt1tt75

22574284525809710tt1
type: Position
type: ExactPosition
position: 1
reference: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL

22574284525809710tt75
type: Position
type: ExactPosition
position: 75
reference: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL

MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL
type: Simple Sequence
modified: 1993-07-01
version: 1
mass: 8475

P31282
type: Protein
reviewed: true
created: 1993-07-01
modified: 2020-08-12
version: 48
mnemonic: VGK_BPAL3
citation: http://purl.uniprot.org/citations/1532908
recommended name: SIP6D019D1F51915A57
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPF1939E6A67252A81
annotation: SIPFEE21E09BD0E9AFB
annotation: PRO_0000164909
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/1185
sequence: MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD
proteome: Genome

P31282-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

SIP6D019D1F51915A57
type: Structured Name
full name: K protein

K
type: Gene

SIPF1939E6A67252A81
type: Function Annotation
comment: No function has yet been ascribed to K protein.

SIPFEE21E09BD0E9AFB
type: Annotation
comment: Gene K overlaps genes B, A, and C.

PRO_0000164909
type: Chain Annotation
comment: K protein
mass: 6235
range: 22574284525810222tt1tt53

22574284525810222tt1
type: Position
type: ExactPosition
position: 1
reference: MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD

22574284525810222tt53
type: Position
type: ExactPosition
position: 53
reference: MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD

MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD
type: Simple Sequence
modified: 1993-07-01
version: 1
mass: 6235

P31281
type: Protein
reviewed: true
created: 1993-07-01
modified: 2022-12-14
version: 114
mnemonic: G_BPAL3
old mnemonic: VGG_BPAL3
citation: http://purl.uniprot.org/citations/1532908
citation: http://purl.uniprot.org/citations/387790
citation: http://purl.uniprot.org/citations/12473449
recommended name: SIP12A829E060CA65FB
alternative name: SIPDA425EF68A145003
alternative name: SIP33A66512EB1C6909
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP0A489F4DE120898A
annotation: SIPFFBCDF7616E5787A
annotation: SIP9D268335B42A4D61
annotation: SIPB14BD78812CF4667
annotation: PRO_0000164892
annotation: SIP4255055084B714E4
annotation: SIP0A011C3ADD8932EE
annotation: SIP5B25C5A413F30219
annotation: SIP5E8E069A40BE3EE9
annotation: SIPBCC233D115629E89
annotation: SIPF2381EB21E94050D
annotation: SIP53BA0C5EE718DC61
annotation: SIPCC120879DC6CCB02
annotation: SIPB069152EF48BAD07
annotation: SIP9DFECDFD4C382359
annotation: SIP49928FC08E26538B
annotation: SIP55BA747692C87DDA
annotation: SIPF45128C82392770A
existence: Evidence at Protein Level Existence
classified with: http://purl.uniprot.org/keywords/2
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/903
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/1161
classified with: http://purl.uniprot.org/keywords/1171
classified with: GO_0019028
classified with: GO_0019048
classified with: GO_0046718
classified with: GO_0019062
sequence: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK
proteome: Genome

P31281-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

P31281-citation-387790
type: Citation Statement
scope: PARTIAL PROTEIN SEQUENCE

http://purl.uniprot.org/citations/12473449
type: Journal Citation
title: Structural studies of bacteriophage alpha3 assembly.
author: Bernal R.A.
author: Hafenstein S.
author: Olson N.H.
author: Bowman V.D.
author: Chipman P.R.
author: Baker T.S.
author: Fane B.A.
author: Rossmann M.G.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/12473449
date: 2003
name: J. Mol. Biol.
volume: 325
pages: 11-24

P31281-citation-12473449
type: Citation Statement
scope: X-RAY CRYSTALLOGRAPHY (3.5 ANGSTROMS)

https://viperdb.scripps.edu/Info_Page.php
type: Resource
comment: Virus Particle ExploreR db; Icosahedral capsid structure

1M06
type: Structure Resource
database: PDB
method: X-Ray Crystallography
resolution: 3.50
chain sequence mapping: PDB 1M06 tt1tt187
chain sequence mapping: PDB 1M06 tt1tt24
chain sequence mapping: PDB 1M06 tt1tt431

PDB 1M06 tt1tt187
chain: G=1-187

1M0F
type: Structure Resource
database: PDB
method: Electron Microscopy
resolution: 16.00
chain sequence mapping: PDB 1M0F tt1tt187
chain sequence mapping: PDB 1M0F tt1tt431

PDB 1M0F tt1tt187
chain: G=1-187

1RB8
type: Structure Resource
database: PDB
method: X-Ray Crystallography
resolution: 3.50
chain sequence mapping: PDB 1RB8 tt1tt187
chain sequence mapping: PDB 1RB8 tt1tt431

PDB 1RB8 tt1tt187
chain: G=1-187

IPR016184
type: Resource
database: InterPro
comment: Capsid/spike_ssDNA_virus

IPR003515
type: Resource
database: InterPro
comment: Spike_G

IPR029053
type: Resource
database: InterPro
comment: Viral_coat

PF02306
type: Resource
database: Pfam
comment: Phage_G
signature sequence match: Pfam PF02306 match 1

PIRSF004159
type: Resource
database: PIRSF
comment: Spike_G
signature sequence match: PIRSF PIRSF004159 match 1

SSF88645
type: Resource
database: SUPFAM
comment: ssDNA viruses
signature sequence match: SUPFAM SSF88645 match 1

SIP12A829E060CA65FB
type: Structured Name
full name: Major spike protein G

SIPDA425EF68A145003
type: Structured Name
full name: G protein

SIP33A66512EB1C6909
type: Structured Name
full name: GPG

G
type: Gene

SIP0A489F4DE120898A
type: Function Annotation
comment: Attaches the circulating virion to the bacterial lipopolysaccharides which serve as receptor for the virus. Determines the phage host-range. Probably triggers with protein H the injection of the phage DNA into the host cytoplasm upon conformational changes induced by the interaction with host lipopolysaccharides (By similarity).

SIPFFBCDF7616E5787A
type: Subunit Annotation
comment: The virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein. There are 12 spikes which are each composed of 5 G and one H proteins.

SIPB14BD78812CF4667
type: Similarity Annotation
comment: Belongs to the microvirus G protein family.

PRO_0000164892
type: Chain Annotation
comment: Major spike protein G
mass: 19585
range: 22574284525809966tt1tt187

22574284525809966tt1
type: Position
type: ExactPosition
position: 1
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt187
type: Position
type: ExactPosition
position: 187
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt16
type: Position
type: ExactPosition
position: 16
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt24
type: Position
type: ExactPosition
position: 24
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt31
type: Position
type: ExactPosition
position: 31
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt35
type: Position
type: ExactPosition
position: 35
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt43
type: Position
type: ExactPosition
position: 43
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt54
type: Position
type: ExactPosition
position: 54
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt60
type: Position
type: ExactPosition
position: 60
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt69
type: Position
type: ExactPosition
position: 69
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt76
type: Position
type: ExactPosition
position: 76
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt91
type: Position
type: ExactPosition
position: 91
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt96
type: Position
type: ExactPosition
position: 96
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt108
type: Position
type: ExactPosition
position: 108
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt110
type: Position
type: ExactPosition
position: 110
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt113
type: Position
type: ExactPosition
position: 113
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt114
type: Position
type: ExactPosition
position: 114
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt116
type: Position
type: ExactPosition
position: 116
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt118
type: Position
type: ExactPosition
position: 118
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt120
type: Position
type: ExactPosition
position: 120
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt125
type: Position
type: ExactPosition
position: 125
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt127
type: Position
type: ExactPosition
position: 127
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt129
type: Position
type: ExactPosition
position: 129
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt141
type: Position
type: ExactPosition
position: 141
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt150
type: Position
type: ExactPosition
position: 150
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt161
type: Position
type: ExactPosition
position: 161
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt164
type: Position
type: ExactPosition
position: 164
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

22574284525809966tt175
type: Position
type: ExactPosition
position: 175
reference: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK

MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK
type: Simple Sequence
modified: 1993-07-01
version: 1
mass: 19585

http://purl.uniprot.org/uniprot/P31281#attribution-609619A7DF3E53CE5E48EDEF8B8F9DD1
manual: true
evidence: ECO_0000250

http://purl.uniprot.org/uniprot/P31281#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

P69548
type: Protein
reviewed: true
created: 2005-03-15
modified: 2021-06-02
version: 57
mnemonic: J_BPAL3
old mnemonic: VGJ_BPAL3
replaces: P08766
citation: http://purl.uniprot.org/citations/6088949
citation: http://purl.uniprot.org/citations/1532908
recommended name: SIPF45886DDFE527866
alternative name: SIP9E05DB34C19B0D81
alternative name: SIPD1E82CC24416AA80
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPA56D78E5A22E4D3F
annotation: SIP465194D6D5875C88
annotation: SIPE79243E3F737772E
annotation: SIP4913483C2EF6214B
annotation: PRO_0000164904
annotation: SIPB5F15CBE5EC4ADD1
annotation: SIP1AEFB5CCACC3EB0C
annotation: SIPB116E02A3BBC426D
existence: Evidence at Protein Level Existence
classified with: http://purl.uniprot.org/keywords/2
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/238
classified with: http://purl.uniprot.org/keywords/1035
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/231
classified with: GO_0030430
classified with: GO_0019028
classified with: GO_0003677
sequence: MKKARRSPSRRKGARLWYVGGSQF
proteome: Genome

P69548-citation-6088949
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

P69548-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

PDB 1M06 tt1tt24
chain: J=1-24

IPR006815
type: Resource
database: InterPro
comment: Microvir_J-like

PF04726
type: Resource
database: Pfam
comment: Microvir_J
signature sequence match: Pfam PF04726 match 1

PIRSF004161
type: Resource
database: PIRSF
comment: Microvir_J
signature sequence match: PIRSF PIRSF004161 match 1

SIPF45886DDFE527866
type: Structured Name
full name: DNA-binding protein J

SIP9E05DB34C19B0D81
type: Structured Name
full name: J protein

SIPD1E82CC24416AA80
type: Structured Name
full name: Small core protein

J
type: Gene

SIPA56D78E5A22E4D3F
type: Function Annotation
comment: Mediates ssDNA packaging into virion, it locates to the internal surface of the capsid, thereby displacing the internal scaffolding protein B during virion formation. Protein J binds to and is packaged with the viral ssDNA. Additionally, protein J plays a role in viral attachment efficiency to the host cell.

SIP465194D6D5875C88
type: Subunit Annotation
comment: Interacts with F protein.

SIPE79243E3F737772E
type: Subcellular Location Annotation
comment: situated at the interface between the internal surface of the capsid and the nucleic acid.
located in: SIP1C3DFFBD8B097C8B
located in: SIP52CE6B24AEDA379F

SIP4913483C2EF6214B
type: Similarity Annotation
comment: Belongs to the microviridae J protein family.

PRO_0000164904
type: Chain Annotation
comment: DNA-binding protein J
mass: 2823
range: 22577617470502958tt1tt24

22577617470502958tt1
type: Position
type: ExactPosition
position: 1
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt24
type: Position
type: ExactPosition
position: 24
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt3
type: Position
type: ExactPosition
position: 3
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt5
type: Position
type: ExactPosition
position: 5
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt12
type: Position
type: ExactPosition
position: 12
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt14
type: Position
type: ExactPosition
position: 14
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt19
type: Position
type: ExactPosition
position: 19
reference: MKKARRSPSRRKGARLWYVGGSQF

22577617470502958tt21
type: Position
type: ExactPosition
position: 21
reference: MKKARRSPSRRKGARLWYVGGSQF

MKKARRSPSRRKGARLWYVGGSQF
type: Simple Sequence
modified: 2005-03-15
version: 1
mass: 2823

http://purl.uniprot.org/uniprot/P69548#attribution-124FC5A7CDF87DD3FB5365C8F4319242
manual: true
evidence: ECO_0000250
source: P69592

http://purl.uniprot.org/uniprot/P69548#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

P08767
type: Protein
reviewed: true
created: 1988-11-01
modified: 2022-12-14
version: 101
mnemonic: CAPSD_BPAL3
old mnemonic: VGF_BPAL3
citation: http://purl.uniprot.org/citations/1532908
citation: http://purl.uniprot.org/citations/6088949
citation: http://purl.uniprot.org/citations/12473449
recommended name: SIP8695C633CF21705B
alternative name: SIPFA6CB4B6B9F566BB
alternative name: SIPBD1E6DF15377B387
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP53CE355320F6E8C4
annotation: SIP756C72D540AF8DA0
annotation: SIPF8226F4EB3CFE25B
annotation: SIP5EF767946E9B3DE6
annotation: SIP4DAB2BE56BDE5450
annotation: PRO_0000164887
annotation: SIPD1DE5E4060C3DD0B
annotation: SIPE65B93B394DC38F4
annotation: SIPDFEDC948BCF2E5FA
annotation: SIPCFD28A40FD456BBF
annotation: SIP1FC838424CD782B7
annotation: SIPC9B3E0607BC3466A
annotation: SIPD90600AE84A53D32
annotation: SIP68E3EE5B5929A532
annotation: SIP29E8A85BC11556DA
annotation: SIPF4B4AE92505D6949
annotation: SIP6C550F61F2A61C5D
annotation: SIP67919508F31463EC
annotation: SIP5823D8B7C5E94856
annotation: SIP76CDD649A89BAF00
annotation: SIPC1A511243B48FDCF
annotation: SIPB32B47F81FB9E2BC
annotation: SIPECD1B8A81484A011
annotation: SIPC64544DE601D1505
annotation: SIP4CB1C0337FDF6D7D
annotation: SIP2F794A76C85C1119
annotation: SIP7011D23DB8C63A68
annotation: SIP58A38BAC7A400B9E
annotation: SIP9927A7BD078789E7
annotation: SIP300EF0307ABF0A7B
annotation: SIPBDE00DA8F09ACD11
annotation: SIP26894DE5B877AF7B
annotation: SIP108AF3A5A2EB3DF6
annotation: SIP3567C22DFB524C1E
annotation: SIPF334FA97C73E5D86
annotation: SIPC738B38DBBD5A58E
annotation: SIPD2551ED3B462E87F
annotation: SIPD3C4AB9AF9E2E3B8
annotation: SIPF1575F433E7BA78D
annotation: SIP9E4DFB16497D5AFB
annotation: SIPBFEA6367DA375715
annotation: SIPD80FDF1938414D1E
annotation: SIPA13968F143BC6145
annotation: SIP67423373467A50A8
existence: Evidence at Protein Level Existence
classified with: http://purl.uniprot.org/keywords/2
classified with: http://purl.uniprot.org/keywords/1185
classified with: http://purl.uniprot.org/keywords/1140
classified with: http://purl.uniprot.org/keywords/1171
classified with: GO_0039615
classified with: GO_0005198
classified with: GO_0046718
sequence: P08767-1
proteome: Genome

P08767-citation-1532908
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA]

P08767-citation-6088949
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-13

P08767-citation-12473449
type: Citation Statement
scope: X-RAY CRYSTALLOGRAPHY (3.50 ANGSTROMS)

https://viperdb.scripps.edu/Info_Page.php
type: Resource
comment: Virus Particle ExploreR db; Icosahedral capsid structure

PDB 1M06 tt1tt431
chain: F=1-431

PDB 1M0F tt1tt431
chain: F=1-431

PDB 1RB8 tt1tt431
chain: F=1-431

IPR003514
type: Resource
database: InterPro
comment: Microviridae_protein_F

IPR037002
type: Resource
database: InterPro
comment: Microviridae_protein_F_sf

PF02305
type: Resource
database: Pfam
comment: Phage_F
signature sequence match: Pfam PF02305 match 1
signature sequence match: Pfam PF02305 match 2

SIP8695C633CF21705B
type: Structured Name
full name: Capsid protein F

SIPFA6CB4B6B9F566BB
type: Structured Name
full name: F protein

SIPBD1E6DF15377B387
type: Structured Name
full name: GPF

F
type: Gene

SIP53CE355320F6E8C4
type: Function Annotation
comment: Assembles to form an icosahedral capsid with a T=1 symmetry, about 30 nm in diameter, and consisting of 60 capsid proteins F. Upon virus binding to host cell, one of the spikes dissociates from the capsid and the virus interacts with LPS through the exposed EF loops on the F proteins. After the genome had been ejected, the channel formed by the F proteins at the unique fivefold axis remains open.

SIP756C72D540AF8DA0
type: Subunit Annotation
comment: Pentamerizes and interacts with H protein, G and B pentamers to form 12S pre-assembly complex. By binding with protein D, induces joining of twelve 12S complex to form the procapsid. The procapsid has an external scaffold made of 240 copies of protein D, 60 copies of the internally located B protein, and contains 60 copies of each of the viral structural proteins F and G. Upon genome packaging, interacts with protein J. The mature virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein.

SIP5EF767946E9B3DE6
type: Similarity Annotation
comment: Belongs to the microviridae F protein family.

SIP4DAB2BE56BDE5450
type: Initiator Methionine Annotation
comment: Removed; by host
range: 22571016139454254tt1tt1

22571016139454254tt1
type: Position
type: ExactPosition
position: 1
reference: P08767-1

PRO_0000164887
type: Chain Annotation
comment: Capsid protein F
mass: 49205
range: 22571016139454254tt2tt431

22571016139454254tt2
type: Position
type: ExactPosition
position: 2
reference: P08767-1

22571016139454254tt431
type: Position
type: ExactPosition
position: 431
reference: P08767-1

22571016139454254tt11
type: Position
type: ExactPosition
position: 11
reference: P08767-1

22571016139454254tt14
type: Position
type: ExactPosition
position: 14
reference: P08767-1

22571016139454254tt17
type: Position
type: ExactPosition
position: 17
reference: P08767-1

22571016139454254tt23
type: Position
type: ExactPosition
position: 23
reference: P08767-1

22571016139454254tt25
type: Position
type: ExactPosition
position: 25
reference: P08767-1

22571016139454254tt36
type: Position
type: ExactPosition
position: 36
reference: P08767-1

22571016139454254tt41
type: Position
type: ExactPosition
position: 41
reference: P08767-1

22571016139454254tt52
type: Position
type: ExactPosition
position: 52
reference: P08767-1

22571016139454254tt55
type: Position
type: ExactPosition
position: 55
reference: P08767-1

22571016139454254tt58
type: Position
type: ExactPosition
position: 58
reference: P08767-1

22571016139454254tt63
type: Position
type: ExactPosition
position: 63
reference: P08767-1

22571016139454254tt73
type: Position
type: ExactPosition
position: 73
reference: P08767-1

22571016139454254tt74
type: Position
type: ExactPosition
position: 74
reference: P08767-1

22571016139454254tt78
type: Position
type: ExactPosition
position: 78
reference: P08767-1

22571016139454254tt80
type: Position
type: ExactPosition
position: 80
reference: P08767-1

22571016139454254tt88
type: Position
type: ExactPosition
position: 88
reference: P08767-1

22571016139454254tt89
type: Position
type: ExactPosition
position: 89
reference: P08767-1

22571016139454254tt91
type: Position
type: ExactPosition
position: 91
reference: P08767-1

22571016139454254tt97
type: Position
type: ExactPosition
position: 97
reference: P08767-1

22571016139454254tt99
type: Position
type: ExactPosition
position: 99
reference: P08767-1

22571016139454254tt104
type: Position
type: ExactPosition
position: 104
reference: P08767-1

22571016139454254tt107
type: Position
type: ExactPosition
position: 107
reference: P08767-1

22571016139454254tt108
type: Position
type: ExactPosition
position: 108
reference: P08767-1

22571016139454254tt110
type: Position
type: ExactPosition
position: 110
reference: P08767-1

22571016139454254tt118
type: Position
type: ExactPosition
position: 118
reference: P08767-1

22571016139454254tt121
type: Position
type: ExactPosition
position: 121
reference: P08767-1

22571016139454254tt122
type: Position
type: ExactPosition
position: 122
reference: P08767-1

22571016139454254tt135
type: Position
type: ExactPosition
position: 135
reference: P08767-1

22571016139454254tt149
type: Position
type: ExactPosition
position: 149
reference: P08767-1

22571016139454254tt151
type: Position
type: ExactPosition
position: 151
reference: P08767-1

22571016139454254tt154
type: Position
type: ExactPosition
position: 154
reference: P08767-1

22571016139454254tt159
type: Position
type: ExactPosition
position: 159
reference: P08767-1

22571016139454254tt169
type: Position
type: ExactPosition
position: 169
reference: P08767-1

22571016139454254tt171
type: Position
type: ExactPosition
position: 171
reference: P08767-1

22571016139454254tt193
type: Position
type: ExactPosition
position: 193
reference: P08767-1

22571016139454254tt212
type: Position
type: ExactPosition
position: 212
reference: P08767-1

22571016139454254tt216
type: Position
type: ExactPosition
position: 216
reference: P08767-1

22571016139454254tt222
type: Position
type: ExactPosition
position: 222
reference: P08767-1

22571016139454254tt229
type: Position
type: ExactPosition
position: 229
reference: P08767-1

22571016139454254tt233
type: Position
type: ExactPosition
position: 233
reference: P08767-1

22571016139454254tt236
type: Position
type: ExactPosition
position: 236
reference: P08767-1

22571016139454254tt245
type: Position
type: ExactPosition
position: 245
reference: P08767-1

22571016139454254tt247
type: Position
type: ExactPosition
position: 247
reference: P08767-1

22571016139454254tt251
type: Position
type: ExactPosition
position: 251
reference: P08767-1

22571016139454254tt255
type: Position
type: ExactPosition
position: 255
reference: P08767-1

22571016139454254tt259
type: Position
type: ExactPosition
position: 259
reference: P08767-1

22571016139454254tt261
type: Position
type: ExactPosition
position: 261
reference: P08767-1

22571016139454254tt277
type: Position
type: ExactPosition
position: 277
reference: P08767-1

22571016139454254tt280
type: Position
type: ExactPosition
position: 280
reference: P08767-1

22571016139454254tt291
type: Position
type: ExactPosition
position: 291
reference: P08767-1

22571016139454254tt302
type: Position
type: ExactPosition
position: 302
reference: P08767-1

22571016139454254tt305
type: Position
type: ExactPosition
position: 305
reference: P08767-1

22571016139454254tt311
type: Position
type: ExactPosition
position: 311
reference: P08767-1

22571016139454254tt314
type: Position
type: ExactPosition
position: 314
reference: P08767-1

22571016139454254tt318
type: Position
type: ExactPosition
position: 318
reference: P08767-1

22571016139454254tt321
type: Position
type: ExactPosition
position: 321
reference: P08767-1

22571016139454254tt327
type: Position
type: ExactPosition
position: 327
reference: P08767-1

22571016139454254tt330
type: Position
type: ExactPosition
position: 330
reference: P08767-1

22571016139454254tt331
type: Position
type: ExactPosition
position: 331
reference: P08767-1

22571016139454254tt333
type: Position
type: ExactPosition
position: 333
reference: P08767-1

22571016139454254tt343
type: Position
type: ExactPosition
position: 343
reference: P08767-1

22571016139454254tt346
type: Position
type: ExactPosition
position: 346
reference: P08767-1

22571016139454254tt350
type: Position
type: ExactPosition
position: 350
reference: P08767-1

22571016139454254tt352
type: Position
type: ExactPosition
position: 352
reference: P08767-1

22571016139454254tt361
type: Position
type: ExactPosition
position: 361
reference: P08767-1

22571016139454254tt365
type: Position
type: ExactPosition
position: 365
reference: P08767-1

22571016139454254tt376
type: Position
type: ExactPosition
position: 376
reference: P08767-1

22571016139454254tt380
type: Position
type: ExactPosition
position: 380
reference: P08767-1

22571016139454254tt384
type: Position
type: ExactPosition
position: 384
reference: P08767-1

22571016139454254tt388
type: Position
type: ExactPosition
position: 388
reference: P08767-1

22571016139454254tt392
type: Position
type: ExactPosition
position: 392
reference: P08767-1

22571016139454254tt398
type: Position
type: ExactPosition
position: 398
reference: P08767-1

22571016139454254tt406
type: Position
type: ExactPosition
position: 406
reference: P08767-1

22571016139454254tt419
type: Position
type: ExactPosition
position: 419
reference: P08767-1

22571016139454254tt424
type: Position
type: ExactPosition
position: 424
reference: P08767-1

22571016139454254tt428
type: Position
type: ExactPosition
position: 428
reference: P08767-1

P08767-1
type: Simple Sequence
modified: 1993-07-01
version: 2
mass: 49337
value: MSNVQTSAEREIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGLAIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGYVGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARYRFRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQERTYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEHHYLAGKSQLTYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYVNFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNKQARYNVSVYRHMPTVRDSIMTS

http://purl.uniprot.org/uniprot/P08767#attribution-4EFD7DC91209BE9E0A3E8605BF10BDA4
manual: true
evidence: ECO_0000250
source: P03641

http://purl.uniprot.org/uniprot/P08767#attribution-080ED3982FEC43F7C43A0689717F3D20
manual: true
evidence: ECO_0000305

http://purl.uniprot.org/uniprot/P08767#attribution-EA5A86DD134917B55334A8BFB6455732
manual: true
evidence: ECO_0007744
source: 1M06

http://purl.uniprot.org/uniprot/P08767#attribution-CD194C9F97C1BA89B55F17F9EBEB3C79
manual: true
evidence: ECO_0007744
source: 1M0F

Q6LEK5
type: Protein
reviewed: false
created: 2004-07-05
modified: 2022-12-14
version: 34
mnemonic: Q6LEK5_BPAL3
citation: http://purl.uniprot.org/citations/387790
submitted name: SIPECCCF08CE53EECB4
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPD7FEAB91662A8257
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/167
classified with: GO_0019028
sequence: GRVIGTIATTQVIHEYQVLQPLK

Q6LEK5-citation-387790
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIPECCCF08CE53EECB4
type: Structured Name
full name: Major coat protein

22859174321534254tt1
type: Position
type: ExactPosition
position: 1
reference: GRVIGTIATTQVIHEYQVLQPLK

GRVIGTIATTQVIHEYQVLQPLK
type: Simple Sequence
modified: 2004-07-05
version: 1
fragment: single
mass: 2565

Q2LL31
type: Protein
reviewed: false
created: 2006-02-21
modified: 2020-08-12
version: 30
mnemonic: Q2LL31_BPAL3
citation: http://purl.uniprot.org/citations/16428417
submitted name: SIP7CE382E61A09129C
organism: http://purl.uniprot.org/taxonomy/10849
existence: Predicted Existence
sequence: MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD
proteome: Genome

http://purl.uniprot.org/citations/16428417
type: Journal Citation
title: Horizontal gene transfer and the evolution of microvirid coliphage genomes.
author: Rokyta D.R.
author: Burch C.L.
author: Caudle S.B.
author: Wichman H.A.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/16428417
date: 2006
name: J. Bacteriol.
volume: 188
pages: 1134-1142

Q2LL31-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP7CE382E61A09129C
type: Structured Name
full name: GpK

K
type: Gene

MKHVNTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLLCKLSRHFD
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 6235

Q2LL33
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-12-14
version: 56
mnemonic: Q2LL33_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP12A829E060CA65FB
alternative name: SIPDA425EF68A145003
alternative name: SIP33A66512EB1C6909
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP9E1BB295F12DB0D0
annotation: SIP15856842AB1B4E09
annotation: SIP07B477506EF1CF59
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/945
classified with: GO_0019028
classified with: GO_0019048
classified with: GO_0046718
classified with: GO_0019062
sequence: MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK
proteome: Genome

Q2LL33-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP12A829E060CA65FB
type: Structured Name
full name: Major spike protein G

SIPDA425EF68A145003
type: Structured Name
full name: G protein

SIP33A66512EB1C6909
type: Structured Name
full name: GPG

G
type: Gene

SIP9E1BB295F12DB0D0
type: Function Annotation
comment: Attaches the circulating virion to the bacterial lipopolysaccharides which serve as receptor for the virus. Determines the phage host-range. Probably triggers with protein H the injection of the phage DNA into the host cytoplasm upon conformational changes induced by the interaction with host lipopolysaccharides.

SIP07B477506EF1CF59
type: Similarity Annotation
comment: Belongs to the microvirus G protein family.

MYQNFVTKHDTAIQTSRFSVTGNVIPAAPTGNIPVINGGSITAERAVVNLYANMNVSTSSDGSFIVAMKVDTSPTDPNCVISAGVNLSFAGTSYPIVGIVRFESASEQPTSIAGSEVEHYPIEMSVGSGGVCSARDCATVDIHPRTSGNNVFVGVICSSAKWTSGRVIGTIATTQVIHEYQVLQPLK
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 19585

Q2LL26
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-12-14
version: 48
mnemonic: Q2LL26_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP8695C633CF21705B
alternative name: SIPFA6CB4B6B9F566BB
alternative name: SIPBD1E6DF15377B387
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP6E7D5E53998AC011
annotation: SIP05F5990929659895
annotation: SIP5112B944BE6C903B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1171
classified with: GO_0005198
classified with: GO_0046718
sequence: Q2LL26-1
proteome: Genome

Q2LL26-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP8695C633CF21705B
type: Structured Name
full name: Capsid protein F

SIPFA6CB4B6B9F566BB
type: Structured Name
full name: F protein

SIPBD1E6DF15377B387
type: Structured Name
full name: GPF

F
type: Gene

SIP6E7D5E53998AC011
type: Subunit Annotation
comment: Pentamerizes and interacts with H protein, G and B pentamers to form 12S pre-assembly complex. By binding with protein D, induces joining of twelve 12S complex to form the procapsid. The procapsid has an external scaffold made of 240 copies of protein D, 60 copies of the internally located B protein, and contains 60 copies of each of the viral structural proteins F and G. Upon genome packaging, interacts with protein J. The mature virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein.

SIP5112B944BE6C903B
type: Similarity Annotation
comment: Belongs to the microviridae F protein family.

Q2LL26-1
type: Simple Sequence
modified: 2008-09-23
version: 2
mass: 49237
value: MSNVQTSAEREIVDLSHLAFDCGMLGRLKTVSWTPVIAGDSFELDAVGALRLSPLRRGLAIDSKVDFFTFYIPHRHVYGDQWIQFMRDGVNAQPLPSVTCNRYPDHAGYVGTIVPANNRIPKFLHQSYLNIYNNYFRAPWMPERTEANPSNLNEDDARYGFRCCHLKNIWSAPLPPETKLAEEMGIESNSIDIMGLQAAYAQLHTEQERTYFMQRYRDVISSFGGSTSYDADNRPLLVMHTDFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFVPEHGVMMTLALIRFPPISPLEHHYLAGKSQLTYTDLAGDPALIGNLPPREISYRDLFRDGRSGIKIKVAESIWYRTHPDYVNFKYHDLHGFPFLDDAPGTSTGDNLQEAILVRHQDYDACFQSQQLLQWNKQARYNVSVYRHMPTVRDSIMTS

Q2LL27
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-05-25
version: 36
mnemonic: Q2LL27_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP8DC8A879B2825907
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPF7F0357923978A60
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/238
classified with: GO_0019028
classified with: GO_0003677
sequence: MKKARRSPSRRKGARLWYVGGSQF
proteome: Genome

Q2LL27-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP8DC8A879B2825907
type: Structured Name
full name: J protein

J
type: Gene

MKKARRSPSRRKGARLWYVGGSQF
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 2823

Q2LL25
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-01-19
version: 41
mnemonic: Q2LL25_BPAL3
citation: http://purl.uniprot.org/citations/16428417
submitted name: SIP9F82FCC8FFE43C2F
organism: http://purl.uniprot.org/taxonomy/10849
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/235
classified with: http://purl.uniprot.org/keywords/238
classified with: http://purl.uniprot.org/keywords/255
classified with: GO_0003677
classified with: GO_0004519
classified with: GO_0006260
sequence: Q2LL25-1
proteome: Genome

Q2LL25-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP9F82FCC8FFE43C2F
type: Structured Name
full name: GpA

A
type: Gene

Q2LL25-1
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 57368
value: MATEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQLEKRLSEETHLDDETLAIYESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFLFEMICPGVRYGKTLNSLWTKYVVQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNRMTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRSVKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQINSFRGMWPYGFTQPIAVRYQHDAYSRKGWLWPVDKTGKAMQSKPYQAVAWYVTKYVAKQSDQRQKAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPLYQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKTIRRLMKKTPEFNWQSSIASMTVTLKNGDISDEARQYIIDAGITPTDLRAKATQTFGGK

Q6LDZ0
type: Protein
reviewed: false
created: 2004-07-05
modified: 2020-08-12
version: 23
mnemonic: Q6LDZ0_BPAL3
citation: http://purl.uniprot.org/citations/6283158
submitted name: SIPAE9EE1D7EDA88A22
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIP9DDC8363831213A4
annotation: SIP975ACAB597C3741E
existence: Predicted Existence
sequence: ESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDA

http://purl.uniprot.org/citations/6283158
type: Journal Citation
title: Nucleotide sequences at the phi X gene A protein cleavage site in replicative form I DNAs of bacteriophages U3, G14, and alpha 3.
author: Heidekamp F.
author: Baas P.D.
author: Jansz H.S.
primary topic of: https://pubmed.ncbi.nlm.nih.gov/6283158
date: 1982
name: J. Virol.
volume: 42
pages: 91-99

Q6LDZ0-citation-6283158
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIPAE9EE1D7EDA88A22
type: Structured Name
full name: Bacteriophage alpha-3 cleavage site for phage phi-X174 gene A protein

22859174305738798tt1
type: Position
type: ExactPosition
position: 1
reference: ESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDA

22859174305738798tt35
type: Position
type: ExactPosition
position: 35
reference: ESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDA

ESQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDA
type: Simple Sequence
modified: 2004-07-05
version: 1
fragment: single
mass: 3878

Q2LL24
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-08-03
version: 45
mnemonic: Q2LL24_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP732E5FECBC07E868
alternative name: SIP5C06335242201E0B
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPCFB8791C422E3F7E
annotation: SIP60A1B4C2BE8B9C76
annotation: SIP7DDE0216D8688438
annotation: SIP59CC1816A4E7BA35
annotation: SIP1618FE94DEC0E00B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1035
classified with: http://purl.uniprot.org/keywords/645
classified with: http://purl.uniprot.org/keywords/118
classified with: GO_0005737
classified with: GO_0030430
classified with: GO_0008233
classified with: GO_0006508
classified with: GO_0019069
sequence: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF
proteome: Genome

Q2LL24-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP732E5FECBC07E868
type: Structured Name
full name: Internal scaffolding protein B

SIP5C06335242201E0B
type: Structured Name
full name: Scaffolding protein B

B
type: Gene

SIPCFB8791C422E3F7E
type: Subunit Annotation
comment: Component of the procapsid complex composed of 60 copies of the internally located B, 240 copies of the external scaffolding protein D, 60 copies of each of the viral structural proteins F and G proteins, and 12 copies of H.

SIP7DDE0216D8688438
type: Similarity Annotation
comment: Belongs to the microviridae B protein family.

SIP59CC1816A4E7BA35
type: Region Annotation
comment: Disordered
range: 22854776390825006tt1tt60

22854776390825006tt1
type: Position
type: ExactPosition
position: 1
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

22854776390825006tt60
type: Position
type: ExactPosition
position: 60
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

SIP1618FE94DEC0E00B
type: Compositional Bias Annotation
comment: Polar residues
range: 22854776390825006tt1tt50

22854776390825006tt50
type: Position
type: ExactPosition
position: 50
reference: MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF

MQESINGNLSEERISGTQQSETRNGAPVNGSSEQQGTSGTEPNQLRFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKHVENYSSFDEKDTRVQLAEFYRFNDGHFKKWGYF
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 13335

Q2LL30
type: Protein
reviewed: false
created: 2006-02-21
modified: 2020-08-12
version: 34
mnemonic: Q2LL30_BPAL3
citation: http://purl.uniprot.org/citations/16428417
submitted name: SIPED715B0229AB9CA1
organism: http://purl.uniprot.org/taxonomy/10849
existence: Predicted Existence
classified with: GO_0019073
sequence: MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL
proteome: Genome

Q2LL30-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIPED715B0229AB9CA1
type: Structured Name
full name: GpC

C
type: Gene

MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQWFQIEDWKGNHKKLLDDLKKRDYL
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 8295

Q2LL28
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-12-14
version: 49
mnemonic: Q2LL28_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP556D9BDB6CC62C0B
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPBAD76063B527D4C1
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/578
classified with: http://purl.uniprot.org/keywords/1133
classified with: GO_0016020
classified with: GO_0004857
classified with: GO_0019835
classified with: GO_0019054
sequence: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL
proteome: Genome

Q2LL28-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP556D9BDB6CC62C0B
type: Structured Name
full name: GPE

E
type: Gene

SIPBAD76063B527D4C1
type: Transmembrane Annotation
comment: Helical
range: 22854776390826030tt6tt28

22854776390826030tt6
type: Position
type: ExactPosition
position: 6
reference: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL

22854776390826030tt28
type: Position
type: ExactPosition
position: 28
reference: MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL

MERWTLLDILAFLLLLSLLLPSLLIMFIPSMYKQHASLWKARSLAKTLSMASSARLTPLSSSRTPCVLKQDSKKL
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 8475

Q2LL32
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-05-25
version: 42
mnemonic: Q2LL32_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP446AFE4CFEBEF7B2
alternative name: SIP6C0368C1D13F8A9A
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPF793B98D053585C2
annotation: SIPE6A05775A0C3E56C
existence: Predicted Existence
classified with: http://purl.uniprot.org/keywords/167
classified with: http://purl.uniprot.org/keywords/1171
classified with: GO_0019028
classified with: GO_0046718
sequence: Q2LL32-1
proteome: Genome

Q2LL32-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP446AFE4CFEBEF7B2
type: Structured Name
full name: H protein

SIP6C0368C1D13F8A9A
type: Structured Name
full name: Pilot protein

H
type: Gene

SIPE6A05775A0C3E56C
type: Region Annotation
comment: Disordered
range: 22854776390890030tt57tt79

22854776390890030tt57
type: Position
type: ExactPosition
position: 57
reference: Q2LL32-1

22854776390890030tt79
type: Position
type: ExactPosition
position: 79
reference: Q2LL32-1

Q2LL32-1
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 34844
value: MLGAVVGGIASALASGAASKLFGGSQRGVSVMQQGAESAGLTNGGGAISMDNDQGIQSAIQGSNVPPAGQLPESQNSGVMADAGNMLRNAGKSLLDGTIQAGSDKVKQALIDKLIGGNDAKDRGKATRDYLAAAFPELNPWERAGAGASTAGLESSAQNQQKEMLKMQLDNQKDIAKMQMDNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQARVASILANTDLTTKQATHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNSRYGSSQVTAAAKDVTNMITDAASGASDWVSQQWNSFFKDGKSNGISLNTRK

Q2LL29
type: Protein
reviewed: false
created: 2006-02-21
modified: 2022-12-14
version: 52
mnemonic: Q2LL29_BPAL3
citation: http://purl.uniprot.org/citations/16428417
recommended name: SIP9ADB78B67DF25C86
alternative name: SIP152C29D290A8C813
organism: http://purl.uniprot.org/taxonomy/10849
annotation: SIPE0AB3B47CC9BBEA3
annotation: SIP18B046A8D08ED0AB
annotation: SIP0D43FAD4A3C518DC
annotation: SIPBB951818A715410B
existence: Inferred from Homology Existence
classified with: http://purl.uniprot.org/keywords/1035
classified with: http://purl.uniprot.org/keywords/118
classified with: GO_0005737
classified with: GO_0030430
classified with: GO_0046797
sequence: MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK
proteome: Genome

Q2LL29-citation-16428417
type: Citation Statement
scope: NUCLEOTIDE SEQUENCE

SIP9ADB78B67DF25C86
type: Structured Name
full name: External scaffolding protein D

SIP152C29D290A8C813
type: Structured Name
full name: Scaffolding protein D

D
type: Gene

SIPE0AB3B47CC9BBEA3
type: Function Annotation
comment: Assembles the procapsid by joining twelve 12S pre-assembly complex into a T=1 icosahedral particle, called 108S procapsid. Ten proteins D bind each 12S complex, which are formed by three pentamers of F, G, B protein and a H protein. The scaffolding protein is released from the provirion after genome packaging to form the mature virion.

SIP18B046A8D08ED0AB
type: Subunit Annotation
comment: Component of the procapsid particle composed of 60 copies of the internally located B, 240 copies of the external scaffolding protein D, 60 copies of each of the viral structural proteins F and G, and 12 copies of protein H.

SIPBB951818A715410B
type: Similarity Annotation
comment: Belongs to the microvirus D protein family.

MNIVSDVNYATSVAALRMLQASAVLDVTEEDFDFLTGDKIWIATDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNVQTACLVMEGAEFSENIINGVERPVNAAELFAYTLRIKAGFKETVMDAEENARQKLRANGLK
type: Simple Sequence
modified: 2006-02-21
version: 1
mass: 16673