26S proteasome non-ATPase regulatory subunit RPN1 C-terminal
DNA polymerase epsilon catalytic subunit A C-terminal
SAM-dependent methyltransferase TRM5/TYW2-type
Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase C-terminal
Transcription elongation factor Spt6 helix-hairpin-helix motif
Major facilitator superfamily (MFS) profile
Aspartate/ornithine carbamoyltransferase Asp/Orn-binding
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding
PhoD-like phosphatase metallophosphatase
Anaphase-promoting complex subunit 4-like WD40
Post-transcriptional regulator MKT1 C-terminal
Post-transcriptional regulator MKT1 N-terminal
Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase anticodon-binding
Cation-transporting P-type ATPase N-terminal
Gamma tubulin complex component C-terminal
Gamma tubulin complex component protein N-terminal
Clathrin/coatomer adaptor adaptin-like N-terminal
Signal recognition particle SRP72 subunit RNA-binding
Large ribosomal subunit protein bL12 C-terminal
Small nuclear ribonucleoprotein Prp3 C-terminal
Deubiquitinating enzyme MINDY-3/4 conserved
Translation initiation factor beta propellor-like
Small ribosomal subunit protein uS15 N-terminal
Small ribosomal subunit protein mS35 mitochondrial conserved
Cysteine sulfenic acid (-SOH) intermediate; for peroxidase activity
Large ribosomal subunit protein bL12 oligomerization
Prokaryotic-type class I peptide chain release factors
Large ribosomal subunit protein uL2 C-terminal
Iron hydrogenase large subunit C-terminal
RNA polymerase III subunit RPC82-related helix-turn-helix
CBF1-interacting co-repressor CIR N-terminal
DNA-directed RNA polymerase subunit 2 hybrid-binding
Pseudouridine synthase I TruA alpha/beta
Tyrosine-protein kinase ephrin type A/B receptor-like
Nucleolar pre-ribosomal-associated protein 1 C-terminal
DNA polymerase alpha/delta/epsilon subunit B
Transcription factor CBF/NF-Y/archaeal histone
Serine/threonine specific protein phosphatases
mTERF domain-containing protein 1, mitochondrial
Translation elongation factor EF1B beta/delta subunit guanine nucleotide exchange
Cytochrome oxidase subunit II copper A binding
Large ribosomal subunit protein uL23 N-terminal
DNA/pantothenate metabolism flavoprotein C-terminal
Serine/threonine-protein phosphatase 4 regulatory subunit 3-like central
tRNA(Ile)-lysidine/2-thiocytidine synthase N-terminal
Interaction with phosphoserine on interacting protein
1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
1-deoxy-D-xylulose 5-phosphate reductoisomerase N-terminal
Polyribonucleotide 5'-hydroxyl-kinase Clp1 P-loop
Guanylate-binding protein N-terminal domain-containing protein
CCR4-NOT transcription complex subunit 1
CCR4-NOT transcription complex subunit 1 CAF1-binding
CCR4-Not complex component Not1 C-terminal
Multiple myeloma tumor-associated protein 2-like N-terminal
Aminoacyl-transfer RNA synthetases class-II family profile
Manganese/iron superoxide dismutase C-terminal
Manganese/iron superoxide dismutase N-terminal
DNA mismatch repair proteins mutS family
Phosphorylated adapter RNA export protein RNA-binding
S-adenosylmethionine synthetase C-terminal
S-adenosylmethionine synthetase N-terminal
Ribosomal RNA small subunit methyltransferase E methyltransferase
Inhibitor of growth protein N-terminal histone-binding
Programmed cell death protein 2 C-terminal
Histone RNA hairpin-binding protein RNA-binding
Lon N-terminal domain-containing protein
Translation elongation factor EFTs/EF1B dimerisation
6-phosphogluconate dehydrogenase C-terminal
Important for substrate specificity; cannot use PPi as phosphoryl donor
Proliferating cell nuclear antigen PCNA C-terminal
Proliferating cell nuclear antigen PCNA N-terminal
Alpha-D-phosphohexomutase alpha/beta/alpha
Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic
Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core
Nuclear speckle splicing regulatory protein 1 N-terminal
Rad21/Rec8-like protein C-terminal eukaryotic
U3 small nucleolar RNA-associated protein 20 C-terminal
Phosphomannose isomerase type I catalytic
RecQ mediated genome instability protein 1 N-terminal
Large ribosomal subunit protein uL18 C-terminal eukaryotes
Alpha-ketoglutarate-dependent dioxygenase AlkB-like
Calcium-activated potassium channel BK alpha subunit
CCR4-NOT transcription complex subunit 1 TTP binding
Beta-adaptin appendage C-terminal subdomain
Spen paralogue and orthologue SPOC C-terminal
Histone-binding protein RBBP4 N-terminal
Pentacotripeptide-repeat region of PRORP
Rubredoxin-like domain-containing protein
U3 small nucleolar RNA-associated protein 13 C-terminal
Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated
Large ribosomal subunit protein uL15/eL18
DNA (cytosine-5)-methyltransferase 1 replication foci
tRNA-5-taurinomethyluridine 2-sulfurtransferase
tRNA-specific 2-thiouridylase MnmA-like C-terminal
tRNA-specific 2-thiouridylase MnmA-like central
Large ribosomal subunit protein uL11 C-terminal
Large ribosomal subunit protein uL11 N-terminal
Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins)
Ribosomal RNA-processing protein 7 C-terminal
Prokaryotic-type class I peptide chain release factors domain-containing protein
DNA-directed DNA polymerase family B exonuclease
DNA-directed DNA polymerase family B multifunctional
NFACT RNA-binding domain-containing protein
Phosphoadenosine phosphosulphate reductase
C4-type zinc-finger of DNA polymerase delta
Glucosamine/galactosamine-6-phosphate isomerase
Glucose-6-phosphate dehydrogenase C-terminal
Glucose-6-phosphate dehydrogenase NAD-binding
Pre-mRNA-processing-splicing factor 8 U5-snRNA-binding
Pre-mRNA-processing-splicing factor 8 U6-snRNA-binding
Chromosome segregation protein Spc25 C-terminal
N-acetylglucosaminylphosphatidylinositol deacetylase
Ribosomal RNA adenine methylase transferase N-terminal
Cdk-activating kinase assembly factor MAT1 centre
DNA-directed RNA polymerase RpoA/D/Rpb3-type
Coatomer beta subunit appendage platform
Translation elongation factor IF5A C-terminal
Guanine nucleotide-binding protein-like 3 N-terminal
Cleavage/polyadenylation specificity factor A subunit C-terminal
Cleavage/polyadenylation specificity factor A subunit N-terminal
Small ribosomal subunit protein uS4 N-terminal
Large ribosomal subunit protein uL5 C-terminal
Large ribosomal subunit protein uL5 N-terminal
Cleavage stimulation factor subunit 2 hinge
Ribosomal protein L7Ae/L30e/S12e/Gadd45 domain-containing protein
NIF system FeS cluster assembly NifU N-terminal
Aspartyl/Glutamyl-tRNA(Gln) amidotransferase subunit B/E catalytic
Pre-mRNA processing factor 4 (PRP4)-like
Glutamyl/glutaminyl-tRNA synthetase class Ib anti-codon binding
Methionyl-tRNA synthetase anticodon-binding
Ribosomal RNA methyltransferase SPB1-like C-terminal
FACT complex subunit Spt16 N-terminal lobe
Histone chaperone RTT106/FACT complex subunit SPT16-like middle
N(6)-L-threonylcarbamoyladenine synthase
ATP synthase F1 complex delta/epsilon subunit N-terminal
TATA box binding protein associated factor (TAF) histone-like fold
DNA-directed RNA polymerase RBP11-like dimerisation
Pyridine nucleotide-disulphide oxidoreductase dimerisation
Glyceraldehyde 3-phosphate dehydrogenase NAD(P) binding
Phosphatidylserine amidated glycine; alternate
Proteasome activator complex subunit 4 C-terminal
Aconitase A/isopropylmalate dehydratase small subunit swivel
Aconitase/3-isopropylmalate dehydratase large subunit alpha/beta/alpha
Casein kinase substrate phosphoprotein PP28
Activator of Hsp90 ATPase AHSA1-like N-terminal
tRNA(Met) cytidine acetyltransferase TmcA N-terminal
RNA 3'-terminal phosphate cyclase insert
Translation elongation factor P/YeiP central
Large ribosomal subunit protein uL10-like insertion
Peptidase M1 alanyl aminopeptidase C-terminal
Peptidase M1 alanyl aminopeptidase Ig-like fold
Peptidase M1 membrane alanine aminopeptidase
Large ribosomal subunit protein uL6 alpha-beta
A-kinase anchor protein 7-like phosphoesterase
Inositol polyphosphate-related phosphatase
Nitric oxide synthase-interacting protein zinc-finger
18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23 C-terminal
Cell division control protein 73 C-terminal
Cell-traversal protein for ookinetes and sporozoites
Alanyl-transfer RNA synthetases family profile
RNA polymerase subunit H/Rpb5 C-terminal
Ubiquitin-activating enzyme E1 C-terminal
S-adenosyl-L-homocysteine hydrolase NAD binding
ATPase F1/V1/A1 complex alpha/beta subunit N-terminal
ATPase F1/V1/A1 complex alpha/beta subunit nucleotide-binding
26S proteasome regulatory subunit RPN2 C-terminal
Alpha-glycerophosphate oxidase C-terminal
Glycerol-3-phosphate dehydrogenase NAD-dependent C-terminal
Glycerol-3-phosphate dehydrogenase NAD-dependent N-terminal
Ribosomal RNA-processing protein 12-like conserved
Vacuolar protein sorting-associated protein 13 DH-like
Fe-S hydro-lyase tartrate dehydratase alpha-type catalytic
Fe-S hydro-lyase tartrate dehydratase beta-type catalytic
Ribosome biogenesis protein BMS1/TSR1 C-terminal
Minichromosome loss protein Mcl1 middle region
Translation factor GUF1 homolog, mitochondrial
Critical for specifying symmetric addition of methyl groups
Thrombospondin type 1 domain containing protein
Small ribosomal subunit protein uS17 N-terminal
RNA polymerase II-associated protein 1 C-terminal
RNA polymerase II-associated protein 1 N-terminal
GPI-GlcNAc transferase complex PIG-H component conserved
Spindle assembly abnormal protein 6 N-terminal
Apoptosis-antagonizing transcription factor C-terminal
Large ribosomal subunit protein uL30 N-terminal eukaryotes
Large ribosomal subunit protein uL30-like ferredoxin-like fold
Abscisic acid G-protein coupled receptor-like
Conserved oligomeric Golgi complex subunit 4
U3 small nucleolar RNA-associated protein 15 C-terminal
Vacuolar protein sorting-associated protein 13 extended chorein
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
NIF system FeS cluster assembly NifU C-terminal
Ribose-phosphate pyrophosphokinase N-terminal
Intron-binding protein aquarius N-terminal
Glycosyl transferase family 28 C-terminal
LamG-like jellyroll fold domain-containing protein
Coatomer gamma subunit appendage Ig-like subdomain
AMP-activated protein kinase glycogen-binding
ATPsynthase alpha/beta subunit N-terminal extension
Vacuolar protein 14 C-terminal Fig4-binding
Glycylpeptide N-tetradecanoyltransferase C-terminal
Glycylpeptide N-tetradecanoyltransferase N-terminal
Peptidase S9 prolyl oligopeptidase catalytic
Nuclear pore localisation protein NPL4 C-terminal
Nuclear pore localisation protein Npl4 ubiquitin-like
Micro-fibrillar-associated protein 1 C-terminal
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)
ATP-grasp fold succinyl-CoA synthetase-type
CAAX amino terminal protease family protein
16S/18S rRNA aminocarboxypropyltransferase Tsr3 C-terminal
RNase L inhibitor RLI-like possible metal-binding
U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein
FAD-dependent oxidoreductase 2 FAD binding
Fumarate reductase/succinate dehydrogenase flavoprotein-like C-terminal
tRNA uridine 5-carboxymethylaminomethyl modification enzyme C-terminal subdomain